
ECOLI00003	Homoserine kinase	Homoserine kinase, conserved protein required for threonine biosynthesis; expression is regulated by the GCN4-mediated general amino acid control pathway.  [Source:SGD;Acc:S000001067]	highly similar to sp|P17423 Saccharomyces cerevisiae YHR025w THR1 homoserine kinase and KLLA0E11528g Kluyveromyces lactis and CAGL0J00649g Candida glabrata, start by similarity	Probable homoserine kinase [Source:GeneDB_Spombe;Acc:SPBC4C3.03]	highly similar to sp|P17423 Saccharomyces cerevisiae YHR025w THR1 homoserine kinase singleton, start by similarity	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	highly similar to uniprot|P17423 Saccharomyces cerevisiae YHR025w THR1 homoserine kinase;	Homoserine kinase	DEHA2E19294p;similar to uniprot|P17423 Saccharomyces cerevisiae YHR025W THR1 homoserine kinase;	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	Homoserine kinase	hypothetical homoserine kinase	Homoserine kinase	Homoserine kinase	
ECOLI00004	Threonine synthase	threonine synthase;	Threonine synthase, conserved protein that catalyzes formation of threonine from 0-phosphohomoserine; expression is regulated by the GCN4-mediated general amino acid control pathway. [Source:SGD;Acc:S000000649]	similar to sp|P16120 Saccharomyces cerevisiae Threonine synthase (EC 4.2.3.1) (TS) YCR053w (o-p-homoserine p-lyase), start by similarity	Threonine synthase	Threonine synthase [Source:GeneDB_Spombe;Acc:SPAC9E9.06c]	highly similar to sp|P16120 Saccharomyces cerevisiae YCR053w THR4 threonine synthase (o-p-homoserine p-lyase) singleton, start by similarity	Threonine synthase	Threonine synthase	Threonine synthase	Threonine synthase	highly similar to uniprot|P16120 Saccharomyces cerevisiae YCR053w THR4 threonine synthase;	DEHA2F18986p;similar to uniprot|P16120 Saccharomyces cerevisiae YCR053W THR4 threonine synthase;	Threonine synthase	Threonine synthase	Threonine synthase	Threonine synthase	ThrC	Threonine synthase	Threonine synthase. Functional classification- Amino acid biosynthesis-Aspartate family	Threonine synthase	Threonine synthase	Probable threonine synthase	Threonine synthase	Threonine synthase	Probable threonine synthase	Threonine synthase	Threonine synthase	Threonine synthase	
ECOLI04255	Putative transposon gamma-delta 80.3 kDa protein	ATPase involved in DNA repair	Putative uncharacterized protein	ATPase involved in DNA repair, putative	hypothetical protein	hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolase domain Evidence 5 : No homology to any previously reported sequences	ATPase involved in DNA repair	Putative uncharacterized protein tnpX	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI04255	Putative transposon gamma-delta 80.3 kDa protein	ATPase involved in DNA repair	Putative uncharacterized protein	ATPase involved in DNA repair, putative	hypothetical protein	hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolase domain Evidence 5 : No homology to any previously reported sequences	ATPase involved in DNA repair	Putative uncharacterized protein tnpX	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00006	UPF0246 protein yaaA	UPF0246 protein HI0984	UPF0246 protein BT_3869	UPF0246 protein CPE2152	UPF0246 protein CC_3385	UPF0246 protein RC0754	UPF0246 protein NMB0895	UPF0246 protein PM0066	UPF0246 protein PA3539	UPF0246 protein VV0659	UPF0246 protein yaaA	UPF0246 protein DP0358	UPF0246 protein BF4021	UPF0246 protein BPSL1241	conserved hypothetical protein	UPF0246 protein yaaA	UPF0246 protein SP_1547	UPF0246 protein VC_2355	UPF0246 protein BP2452	UPF0246 protein BB3890	UPF0246 protein SO_3540	UPF0246 protein ECA3888	UPF0246 protein PSPTO_1244	UPF0246 protein BPP3440	UPF0246 protein PG_1544	UPF0246 protein SpyM3_1790/SPs1787	UPF0246 protein MYPE6270	UPF0246 protein SMU_2070	UPF0246 protein VP0504	
ECOLI00007	Uncharacterized transporter yaaJ	Amino acid carrier protein	Probable amino acid carrier protein	Putative amino acid symporter	Sodium/alanine symporter	Putative amino-acid transport protein	Amino acid carrier protein	Putative sodium:amino acid symporter	Putative transporter yaaJ	similar to GP:15074955; identified by sequence similarity; putative amino acid carrier family protein	Sodium/alanine symporter	Sodium:alanine symporter family protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE AMINO ACID CARRIER TRANSMEMBRANE PROTEIN	Amino acid carrier protein alsT	Amino acid carrier protein	NA(+)-LINKED D-ALANINE GLYCINE PERMEASE	Sodium/alanine symporter	Putative amino acid carrier protein	Inner membrane transport protein	CDS_ID OB2690 sodium:alanine symporter	similar to Z99113-105|CAB13695.1| percent identity: 49 in 473 aa putative amino acid permease	Na+/alanine symporter	similar to Escherichia coli K12 inner membrane transport protein gi: 1786188 (477 aa). BLAST with identity of 98% in 476 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Amino acid carrier protein	Similar to probable amino acid transport protein YaaJ	identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835 amino acid carrier protein	Probable sodium/alanine symporter	Amino acid carrier protein	sodium:alanine symporter	
ECOLI04257	Transposase for transposon gamma-delta	Putative transposase	TnpA; putative transposase protein	Similar to: TNP3_ECOLI transposon Tn3 transposase	transposase Tn3	transposase Tn3 PFAM: transposase Tn3: (0) KEGG: xcv:XCVb0015 Tn5045 transposase, ev=0.0, 49% identity	Tn5045 transposase	transposase	Transposase Tn3 family protein	transposase Tn3 family protein PFAM: transposase Tn3 family protein KEGG: xcv:XCVb0015 Tn5045 transposase	Tn5045 transposase	Transposase, Tn3 family	Transposase	Tn3 family transposase	Tn5045 transposase	Transposase, Tn3 family	Transposase	Transposase Tn3 family protein	Transposase	Transposase Tn3 family protein	Transposase	Transposase Tn3 family protein	Transposase	Transposase Tn3 family protein	Transposase	Transposase IS26	Transposase	Transposase, TnpA family	
ECOLI04257	Transposase for transposon gamma-delta	Putative transposase	TnpA; putative transposase protein	Similar to: TNP3_ECOLI transposon Tn3 transposase	transposase Tn3	transposase Tn3 PFAM: transposase Tn3: (0) KEGG: xcv:XCVb0015 Tn5045 transposase, ev=0.0, 49% identity	Tn5045 transposase	transposase	Transposase Tn3 family protein	transposase Tn3 family protein PFAM: transposase Tn3 family protein KEGG: xcv:XCVb0015 Tn5045 transposase	Tn5045 transposase	Transposase, Tn3 family	Transposase	Tn3 family transposase	Tn5045 transposase	Transposase, Tn3 family	Transposase	Transposase Tn3 family protein	Transposase	Transposase Tn3 family protein	Transposase	Transposase Tn3 family protein	Transposase	Transposase Tn3 family protein	Transposase	Transposase IS26	Transposase	Transposase, TnpA family	
ECOLI00010	Inner membrane protein yaaH	similar to tr|Q96VC8 Yarrowia lipolytica Glyoxylate pathway regulator GPR1, hypothetical start	Transcriptional regulator	Putative uncharacterized protein	Fun34 related protein	highly similar to uniprot|P25613 Saccharomyces cerevisiae YCR010c SPG2 or uniprot|P32907 Saccharomyces cerevisiae YNR002c FUN34;	Uncharacterized protein MTH_215	Putative uncharacterized protein TVG1206700	Conserved hypothetical membrane protein	Putative uncharacterized protein	Transcriptional regulator	Putative uncharacterized protein	Predicted membrane protein	Putative uncharacterized protein STY0009	Conserved hypothetical membrane protein	putative membrane protein	Hypothetical protein yaaH	Gpr1/Fun34/YaaH family protein	Putative uncharacterized protein	Gpr1/fun34/yaaH family protein	Putative membrane protein	Putative uncharacterized protein VP0620	Inner membrane protein yaaH	Predicted membrane protein	Residues 1 to 188 of 188 are 100 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285702.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to unknown protein YaaH of Escherichia coli	Probable membrane protein	IPR000791: GPR1/FUN34/yaaH family putative regulator	
ECOLI00011	UPF0174 protein yaaW	Putative uncharacterized protein	Hypothetical protein yaaW	UPF0174 protein yaaW	Residues 1 to 237 of 237 are 99 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285703.1 putative oxidoreductase	positive regulator for sigma H (sigma 32) promoters, permitting growth at high temperature	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Positive sigma H regulator	Code: S; COG: COG4735 putative oxidoreductase	Code: S; COG: COG4735 putative oxidoreductase	Code: S; COG: COG4735 putative oxidoreductase	Putative uncharacterized protein	Putative oxidoreductase	Hypothetical protein	hypothetical protein KEGG: sec:SC0010 positive regulator for sigma H (sigma 32) promoters, permitting growth at high temperature	conserved hypothetical protein	putative oxidoreductase Code: S; COG: COG4735	putative oxidoreductase	Putative uncharacterized protein yaaW	Putative uncharacterized protein	protein of unknown function UPF0174 PFAM: protein of unknown function UPF0174 KEGG: pau:PA14_03370 hypothetical protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI04258	Uncharacterized HTH-type transcriptional regulator yuaB	RocR	Response regulator receiver domain	Lmo0131 protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL PROTEIN	EAL domain protein	Putative uncharacterized protein VPA1324	Lin0178 protein	Response regulator	identified by match to protein family HMM PF00563 EAL domain protein	EAL domain; COG2200 conserved hypothetical protein	Signalling protein containing EAL domain	response regulator	identified by match to protein family HMM PF00563 EAL domain protein	EAL	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	putative response regulator	Putative diguanylate phosphodiesterase (EAL domain)	EAL domain protein	Diguanylate phosphodiesterase	signaling protein containing EAL domain	Predicted signal transduction protein containing sensor and EAL domains	diguanylate phosphodiesterase PFAM: EAL domain protein KEGG: sdn:Sden_0914 EAL domain protein	EAL-domain containing protein EAL-domain containing protein, ):This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function [1].  The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site. Conserved hypothetical protein	probable two-component response regulator	Complete genome	Hypothetical protein	regulatory protein for cyclic-di-GMP, EAL domain PFAM: EAL domain protein KEGG: pha:PSHAa2203 hypothetical protein	Diguanylate phosphodiesterase	
ECOLI00014	Chaperone protein dnaK	Chaperone protein dnaK	Heat shock 70 kDa protein, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC664.11]	highly similar to sp|P12398 Saccharomyces cerevisiae YJR045c SSC1 mitochondrial heat shock protein 70-related protein, start by similarity	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	heat shock protein hsp70 homologue	Chaperone protein dnaK3	Chaperone protein dnaK	HSP70-LIKE PROTEIN (MITOCHONDRIAL TYPE);11_0540, HSP70-LIKE PROTEIN (MITOCHONDRIAL TYPE), GR75_HUMAN, E. cuniculi gene DNA cross-ref : AJ012470, gene found by Glimmer;	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	identified by match to TIGR protein family HMM TIGR01825 dnaK protein	Chaperone protein dnaK	Chaperone protein dnaK1	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	Chaperone protein dnaK	
ECOLI00015	Chaperone protein dnaJ	Co-chaperone that stimulates the ATPase activity of the HSP70 protein Ssc1p; involved in protein folding/refolding in the mitochodrial matrix; required for proteolysis of misfolded proteins; member of the HSP40 (DnaJ) family of chaperones. [Source:SGD;Acc:S000001878]	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ 1	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	similar to uniprot|P35191 Saccharomyces cerevisiae YFL016c MDJ1 heat shock protein - chaperone;	DEHA2F18766p;similar to uniprot|P35191 Saccharomyces cerevisiae YFL016C MDJ1 Protein involved in folding of mitochondrially synthesized proteins in the mitochondrial matrix;	similar to GB:M15796, GB:J04718, GB:D17061, SP:P12004, PID:181272,  and PID:387005; identified by sequence similarity; putative dnaJ protein	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	Chaperone protein dnaJ	
ECOLI02324	Putative transposase insL for insertion sequence element IS186A/B/C	IS186 ORF1	IS186, transposase	IS186/IS421 transposase	IS186, transposase	Transposase IS4 family protein	pseudo	InsL-3 protein	IS186/IS421 transposase	Putative transposase insL for insertion sequence IS186	
ECOLI00016	Regulatory protein mokC	Gef protein interferes with membrane function when in excess	interferes with membrane function when in excess Gef	interferes with membrane function when in excess Gef	Gef membrane toxin	Regulatory protein for HokC, overlaps CDS of hokC	Putative Hok/gef family protein	Hok/gef cell toxic protein precursor	Putative Hok/gef family protein	Phage maintenance protein	Regulatory protein for HokC, overlaps CDS of hokC	Regulatory protein MokC for HokC 1	Regulatory protein for HokC, overlaps CDS of hokC	MokC protein	Regulatory peptide	Regulatory protein for HokC, overlaps CDS of hokC	regulatory protein MokC for HokC overlaps CDS of hokC	Hok/gef cell toxic protein	
ECOLI00016	Regulatory protein mokC	Gef protein interferes with membrane function when in excess	interferes with membrane function when in excess Gef	interferes with membrane function when in excess Gef	Gef membrane toxin	Regulatory protein for HokC, overlaps CDS of hokC	Putative Hok/gef family protein	Hok/gef cell toxic protein precursor	Putative Hok/gef family protein	Phage maintenance protein	Regulatory protein for HokC, overlaps CDS of hokC	Regulatory protein MokC for HokC 1	Regulatory protein for HokC, overlaps CDS of hokC	MokC protein	Regulatory peptide	Regulatory protein for HokC, overlaps CDS of hokC	regulatory protein MokC for HokC overlaps CDS of hokC	Hok/gef cell toxic protein	
ECOLI00017	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	Na+/H+ antiporter	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	putative Na+/H+ antiporter	Na(+)/H(+) antiporter 1	Na(+)/H(+) antiporter nhaA	Na+/H+ antiporter	Na(+)/H(+) antiporter nhaA	PMID: 2839489 PMID: 1657980 PMID: 1645730 PMID: 8381959 best DB hits: BLAST: pir:B71805; Na+H+-exchanging protein 1 - Helicobacter pylori; E=4e-73 pir:H64713; Na+H+-exchanging protein - Helicobacter pylori (strain; E=1e-72 pir:JX0360; Na+H+-exchanging protein - Vibrio parahaemolyticus; E=2e-65 COG: jhp1447; COG3004 Na+/H+ antiporter; E=4e-74 Na(+)/H(+) antiporter 1	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA 1	Residues 1 to 388 of 388 are 99 pct identical to residues 1 to 388 of a 388 aa protein from Escherichia coli K12 ref: NP_414560.1 Na+ H antiporter, pH dependent	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	Na(+)/H(+) antiporter nhaA	similar to sodium-proton antiporter hypothetical protein	similar to sodium-proton antiporter hypothetical protein	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR004670: Na+/H+ antiporter NhaA NhaA familiy of transport protein, Na+/H antiporter, pH dependent	similar to Salmonella typhi CT18 Na(+)/H(+) antiporter 1 Na(+)/H(+) antiporter 1	NA(+)/H(+) ANTIPORTER 1	
ECOLI00018	Transcriptional activator protein nhaR	Transcriptional activator protein NhaR	Probable Na+/H+ antiporter regulatory protein	putative transcriptional activator protein NhaR	Transcriptional regulator, LysR family	Transcriptional activator protein nhaR	Transcriptional activator protein nhaR	Transcriptional activator protein NhaR	Transcriptional activator protein	Transcriptional activator protein NhaR	Transcriptional activator of nhaA	Transcription activator NhaR	Residues 7 to 307 of 307 are 100 pct identical to residues 1 to 301 of a 301 aa protein from Escherichia coli K12 ref: NP_414561.1 transcriptional activator of nhaA	Transcriptional activator protein NhaR	Transcriptional activator of nhaA	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR001356: Homeobox transcriptional activator of nhaA (LysR family)	similar to Salmonella typhi CT18 transcriptional activator protein NhaR transcriptional activator protein NhaR	Transcriptional activator for cation transport	transcriptional activator protein NhaR	Transcriptional activator of nhaA	transcriptional regulator, LysR family	Code: K; COG: COG0583 transcriptional activator of nhaA	Code: K; COG: COG0583 transcriptional activator of nhaA	Code: K; COG: COG0583 transcriptional activator of nhaA	transcriptional regulator, LysR family	Transcriptional activator protein NhaR	Regulatory protein, LysR	Transcriptional regulator, LysR family	Transcriptional activator protein NhaR	
ECOLI03313	Insertion element IS1 1/5/6 protein insB	Probable insertion element IS1 1/5/6 protein	identified by match to protein family HMM PF03400 InsB	insertion element IS1 1/5/6 protein InsB	Transposase	IS1 transposase InsAB'	Transposase IS1 orfB	

ECOLI00019	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	30S ribosomal protein S20	
ECOLI00021	Riboflavin biosynthesis protein ribF	Riboflavin kinase	Riboflavin biosynthesis protein RibF	Riboflavin kinase , FAD synthetase	Riboflavin biosynthesis protein ribF	Riboflavin biosynthesis protein	Putative riboflavin biosynthesis protein ribF	Putative riboflavin biosynthesis protein ribF	Riboflavin biosynthesis protein ribF	identified by match to TIGR protein family HMM TIGR00125 riboflavin kinase/FMN adenylyltransferase	Riboflavin biosynthesis protein ribF, putative riboflavin kinase	Riboflavin biosynthesis protein RibF	Putative riboflavin kinase	Protein RibF [includes: riboflavin kinase (Flavokinase); Fmn adenylyltransferase	Riboflavin kinase	Putative riboflavin kinase/FAD synthase	Putative riboflavin kinase/FAD synthase	Riboflavin biosynthesis protein	Riboflavin biosynthesis protein RibF	Riboflavin biosynthesis protein RibF	Riboflavin kinase/FMN adenylyltransferase	RibF	Riboflavin kinase/FAD synthase	Putative riboflavin kinase/FMN adenylyltransferase	Riboflavin kinase/FMN adenylyltransferase	FAD synthase	Riboflavin kinase/FMN adenylyltransferase	Riboflavin biosynthesis protein RibF	Riboflavin kinase/FMN adenylyltransferase	
ECOLI04273	Uncharacterized protein yuaO	pseudo	Putative uncharacterized protein	Putative RTX family exoprotein A gene	Autotransporter	Autotransporter	Putative adhesin	ORF28 unknown	HMW2A, high molecular weight adhesin 2	Putative surface-exposed virulence protein bigA	Outer membrane autotransporter barrel	Hemolysin-type calcium-binding protein	Code: UW; COG: COG5295 putative adhesin	Hemolysin-type calcium-binding region PFAM: Hemolysin-type calcium-binding region: (0.15) KEGG: tdn:Tmden_0243 hemolysin-type calcium-binding region, ev=3e-78, 36% identity	hypothetical protein	Putative adhesin	Adhesin aidA-I	Hemolysin-type calcium-binding region	transcript_id=ENSTBET00000001767	Adhesin	YadA C-terminal domain protein PFAM: YadA C-terminal domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein	PE-PGRS family protein	Hypothetical protein	Putative haemagglutinin-like (Or adhesin-like) with a signal peptide and a putative subtilisin-like serine protease domain	Adhesin	Membrane-anchored cell surface protein	hypothetical protein KEGG: ava:Ava_4160 VCBS	Outer membrane autotransporter barrel domain protein precursor	Putative uncharacterized protein	
ECOLI04273	Uncharacterized protein yuaO	pseudo	Putative uncharacterized protein	Putative RTX family exoprotein A gene	Autotransporter	Autotransporter	Putative adhesin	ORF28 unknown	HMW2A, high molecular weight adhesin 2	Putative surface-exposed virulence protein bigA	Outer membrane autotransporter barrel	Hemolysin-type calcium-binding protein	Code: UW; COG: COG5295 putative adhesin	Hemolysin-type calcium-binding region PFAM: Hemolysin-type calcium-binding region: (0.15) KEGG: tdn:Tmden_0243 hemolysin-type calcium-binding region, ev=3e-78, 36% identity	hypothetical protein	Putative adhesin	Adhesin aidA-I	Hemolysin-type calcium-binding region	transcript_id=ENSTBET00000001767	Adhesin	YadA C-terminal domain protein PFAM: YadA C-terminal domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein	PE-PGRS family protein	Hypothetical protein	Putative haemagglutinin-like (Or adhesin-like) with a signal peptide and a putative subtilisin-like serine protease domain	Adhesin	Membrane-anchored cell surface protein	hypothetical protein KEGG: ava:Ava_4160 VCBS	Outer membrane autotransporter barrel domain protein precursor	Putative uncharacterized protein	
ECOLI04273	Uncharacterized protein yuaO	pseudo	Putative uncharacterized protein	Putative RTX family exoprotein A gene	Autotransporter	Autotransporter	Putative adhesin	ORF28 unknown	HMW2A, high molecular weight adhesin 2	Putative surface-exposed virulence protein bigA	Outer membrane autotransporter barrel	Hemolysin-type calcium-binding protein	Code: UW; COG: COG5295 putative adhesin	Hemolysin-type calcium-binding region PFAM: Hemolysin-type calcium-binding region: (0.15) KEGG: tdn:Tmden_0243 hemolysin-type calcium-binding region, ev=3e-78, 36% identity	hypothetical protein	Putative adhesin	Adhesin aidA-I	Hemolysin-type calcium-binding region	transcript_id=ENSTBET00000001767	Adhesin	YadA C-terminal domain protein PFAM: YadA C-terminal domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein	PE-PGRS family protein	Hypothetical protein	Putative haemagglutinin-like (Or adhesin-like) with a signal peptide and a putative subtilisin-like serine protease domain	Adhesin	Membrane-anchored cell surface protein	hypothetical protein KEGG: ava:Ava_4160 VCBS	Outer membrane autotransporter barrel domain protein precursor	Putative uncharacterized protein	
ECOLI00025	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	similar to GB:M65217, SP:Q03933,  and PID:184405; identified by sequence similarity; putative penicillin tolerance protein LytB	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	
ECOLI00026	Non-specific ribonucleoside hydrolase rihC	Putative uncharacterized protein	Inosine-uridine preferring nucleoside hydrolase	Inosine-uridine preferring nucleoside hydrolase	Non-specific ribonucleoside hydrolase rihC	Inosine-uridine preferring nucleoside hydrolase	Nonspecific ribonucleoside hydrolase rihC	Inosine-uridine preferring nucleoside hydrolase	Putative nucleoside hydrolase	Putative nucleoside hydrolase	Non-specific ribonucleoside hydrolase rihC	Putative uncharacterized protein	Residues 1 to 304 of 304 are 99 pct identical to residues 1 to 304 of a 304 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285724.1 orf, conserved hypothetical protein	Purine nucleosidase	identified by match to protein family HMM PF01156 inosine-uridine preferring nucleoside hydrolase family protein	Inosine-uridine preferring nucleoside hydrolase	COG1957 Inosine-uridine nucleoside N-ribohydrolase nucleoside hydrolase	IPR001910: Inosine/uridine-preferring nucleoside hydrolase putative purine nucleoside hydrolase	similar to Salmonella typhi Ty2 putative nucleoside hydrolase (IUNH family) putative nucleoside hydrolase (IUNH family)	Inosine-uridine preferring nucleoside hydrolase	Non-specific ribonucleoside hydrolase rihC	hypothetical protein, similar to inosine-uridine preferring nucleoside hydrolase	Code: F; COG: COG1957 conserved hypothetical protein	similar to gi|27467673|ref|NP_764310.1| [Staphylococcus epidermidis ATCC 12228], percent identity 66 in 301 aa, BLASTP E(): e-116 inosine-uridine preferring nucleoside hydrolase	Code: F; COG: COG1957 conserved hypothetical protein	Inosine/uridine-preferring nucleoside hydrolase	Inosine/uridine-preferring nucleoside hydrolase	Inosine-uridine nucleoside N-ribohydrolase COG1957	
ECOLI04275	Uncharacterized protein yuaQ	similar to GP:15162141, and GP:15162141; identified by sequence similarity; putative outer membrane autotransporter	Autotransporter	EXTRACELLULAR SERINE PROTEASE	Putative beta-barrel outer membrane protein	Putative autotransporter protein	Putative uncharacterized protein	Putative autotransporter protein precursor	PE-PGRS family protein precursor	Autotransporter protein precursor	hypothetical protein KEGG: mmc:Mmcs_3642 PE-PGRS family protein	PE-PGRS family protein	PE-PGRS family protein KEGG: mmc:Mmcs_3642 PE-PGRS family protein	Outer membrane autotransporter barrel	Putative outer membrane autotransporter	Autotransporter	Putative outer membrane autotransporter	Outer membrane autotransporter barrel domain protein	YadA domain protein	Pertactin family	Putative outer membrane autotransporter	Putative beta-barrel outer membrane protein, similar to AidA-I adhesin-like protein	Putative beta-barrel outer membrane protein, similar to AidA-I adhesin-like protein	Outer membrane autotransporter	Putative beta-barrel outer membrane protein	putative autotransporter protein	Putative autotransporter protein	AidA-I adhesin-like protein	
ECOLI04275	Uncharacterized protein yuaQ	similar to GP:15162141, and GP:15162141; identified by sequence similarity; putative outer membrane autotransporter	Autotransporter	EXTRACELLULAR SERINE PROTEASE	Putative beta-barrel outer membrane protein	Putative autotransporter protein	Putative uncharacterized protein	Putative autotransporter protein precursor	PE-PGRS family protein precursor	Autotransporter protein precursor	hypothetical protein KEGG: mmc:Mmcs_3642 PE-PGRS family protein	PE-PGRS family protein	PE-PGRS family protein KEGG: mmc:Mmcs_3642 PE-PGRS family protein	Outer membrane autotransporter barrel	Putative outer membrane autotransporter	Autotransporter	Putative outer membrane autotransporter	Outer membrane autotransporter barrel domain protein	YadA domain protein	Pertactin family	Putative outer membrane autotransporter	Putative beta-barrel outer membrane protein, similar to AidA-I adhesin-like protein	Putative beta-barrel outer membrane protein, similar to AidA-I adhesin-like protein	Outer membrane autotransporter	Putative beta-barrel outer membrane protein	putative autotransporter protein	Putative autotransporter protein	AidA-I adhesin-like protein	
ECOLI00029	Carbamoyl-phosphate synthase large chain	carbamoyl-phosphate synthase arginine-specific large chain;	Large subunit of carbamoyl phosphate synthetase, which catalyzes a step in the synthesis of citrulline, an arginine precursor. [Source:SGD;Acc:S000003870]	highly similar to sp|P03965 Saccharomyces cerevisiae YJR109c CPA2 arginine-specific carbamoylphosphate synthase, large chain, start by similarity	Carbamoylphosphate synthase large subunit	Carbamoyl-phosphate synthase arginine-specific large chain [Source:GeneDB_Spombe;Acc:SPBC215.08c]	highly similar to sp|P03965 Saccharomyces cerevisiae YJR109c CPA2 arginine-specific carbamoylphosphate synthase, large chain, start by similarity	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase, large subunit	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	highly similar to uniprot|P03965 Saccharomyces cerevisiae YJR109c CPA2;	Carbamoyl-phosphate synthase large chain	DEHA2C05412p;similar to uniprot|P03965 Saccharomyces cerevisiae YJR109C CPA2 Large subunit of carbamoyl phosphate synthetase;	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	Carbamoyl phosphate synthetase, large subunit	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	Carbamoyl-phosphate synthase large chain	hypothetical carbamoyl-phosphate synthase large subunit	Carbamoyl-phosphate synthase	
ECOLI04277	Uncharacterized protein yuaR	Hydrolase	Possible secreted hydrolase	Putative hydrolase	Putative hydrolase	Putative protease encoded within prophage CP-933X	similar to AL137166-19|CAB69737.1| percent identity: 28 in 515 aa conserved hypothetical protein	Peptidase	Proteinase	Putative uncharacterized protein	Mb2248c, -, len: 520 aa. Equivalent to Rv2224c, len: 520 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 520 aa overlap). Probable exported protease (EC 3.4.-.-); has signal sequence and lipoprotein motif at N-terminal end. Very similar to three proteases/peptidases from Streptomyces spp.: L42758, L42759, L27466. FASTA score: L4 2758|STMSLPD STMSLPD NID: g940302 - Streptomyces (539 aa) opt: 1032 E(): 0, (37.5% identity in 533 aa overlap). Similar to hypothetical protein SW:YZZE_ECOLI P34211 (27.7% identity in 412 aa overlap) and highly similar to Rv2224c and Rv2672 (49.3% identity in 507 aa overlap); contains PS00013, Prokaryotic membrane lipoprotein lipid attachment site, and PS00120 Lipases, serine active site. Probable exported protease	identified by match to protein family HMM PF00561 hydrolase, alpha/beta fold family	putative proteinase	hydrolase, alpha/beta fold family protein, putative identified by match to protein family HMM PF00561	TAP domain protein precursor	TAP domain protein PFAM: alpha/beta hydrolase fold; TAP domain protein KEGG: lxx:Lxx04090 peptidase	TAP domain protein PFAM: alpha/beta hydrolase fold; TAP domain protein KEGG: sma:SAV4624 protease	exported protease secreted protein function unknown; thought to hydrolyze peptides and/or proteins.	Protease	conserved hypothetical protein	Possible proteinase	Hypothetical protein	Botrytis cinerea hypothetical protein	Putative proteinase	Probable exported protease	ustilago_maydis hypothetical protein	Secretory peptidase	TAP domain protein precursor	TAP domain protein precursor	
ECOLI04277	Uncharacterized protein yuaR	Hydrolase	Possible secreted hydrolase	Putative hydrolase	Putative hydrolase	Putative protease encoded within prophage CP-933X	similar to AL137166-19|CAB69737.1| percent identity: 28 in 515 aa conserved hypothetical protein	Peptidase	Proteinase	Putative uncharacterized protein	Mb2248c, -, len: 520 aa. Equivalent to Rv2224c, len: 520 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 520 aa overlap). Probable exported protease (EC 3.4.-.-); has signal sequence and lipoprotein motif at N-terminal end. Very similar to three proteases/peptidases from Streptomyces spp.: L42758, L42759, L27466. FASTA score: L4 2758|STMSLPD STMSLPD NID: g940302 - Streptomyces (539 aa) opt: 1032 E(): 0, (37.5% identity in 533 aa overlap). Similar to hypothetical protein SW:YZZE_ECOLI P34211 (27.7% identity in 412 aa overlap) and highly similar to Rv2224c and Rv2672 (49.3% identity in 507 aa overlap); contains PS00013, Prokaryotic membrane lipoprotein lipid attachment site, and PS00120 Lipases, serine active site. Probable exported protease	identified by match to protein family HMM PF00561 hydrolase, alpha/beta fold family	putative proteinase	hydrolase, alpha/beta fold family protein, putative identified by match to protein family HMM PF00561	TAP domain protein precursor	TAP domain protein PFAM: alpha/beta hydrolase fold; TAP domain protein KEGG: lxx:Lxx04090 peptidase	TAP domain protein PFAM: alpha/beta hydrolase fold; TAP domain protein KEGG: sma:SAV4624 protease	exported protease secreted protein function unknown; thought to hydrolyze peptides and/or proteins.	Protease	conserved hypothetical protein	Possible proteinase	Hypothetical protein	Botrytis cinerea hypothetical protein	Putative proteinase	Probable exported protease	ustilago_maydis hypothetical protein	Secretory peptidase	TAP domain protein precursor	TAP domain protein precursor	
ECOLI00031	Carnitine operon protein caiE	Carbonate dehydratase related protein	Carnitine operon protein caiE	Carnitine operon protein caiE	anhydrase family 3 protein	Carnitine operon protein caiE	Residues 1 to 203 of 203 are 98 pct identical to residues 1 to 203 of a 203 aa protein from Escherichia coli pir: I41015 caiE protein	stimulates carnitine racemase activity of CaiD and CaiB activity	similar to Salmonella typhi CT18 carnitine operon protein CaiE carnitine operon protein CaiE	Carnitine operon protein caiE	Code: R; COG: COG0663 carnitine operon protein CaiE	Code: R; COG: COG0663 carnitine operon protein CaiE	Carnitine operon protein caiE	Carnitine operon protein caiE	carnitine operon protein CaiE Code: R; COG: COG0663	carnitine operon protein CaiE	PFAM: transferase hexapeptide repeat containing protein KEGG: stm:STM0069 stimulates carnitine racemase activity of CaiD and CaiB activity transferase hexapeptide repeat containing protein	KEGG: spt:SPA0070 carnitine operon protein CaiE carnitine operon protein CaiE	Carnitine operon protein caiE	Transferase hexapeptide repeat containing protein	Predicted acyl transferase	Carnitine operon protein caiE	Carnitine operon protein caiE	Carnitine operon protein caiE	Putative uncharacterized protein	Putative uncharacterized protein	Carnitine operon protein CaiE	Putative transferase in carnitine metabolism	Carnitine operon protein CaiE	
ECOLI00032	Carnitinyl-CoA dehydratase	Carnitinyl-CoA dehydratase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ENOYL-COA HYDRATASE PROTEIN	Carnitinyl-CoA dehydratase	3-hydroxyisobutyryl-coenzyme A hydrolase	Residues 1 to 297 of 297 are 98 pct identical to residues 1 to 297 of a 297 aa protein from Escherichia coli K12 ref: NP_414578.1 carnitine racemase	Enoyl-CoA hydratase protein	IPR001753: Enoyl-CoA hydratase/isomerase carnitine racemase	similar to Salmonella typhi CT18 carnitine racemase carnitine racemase	Carnitinyl-CoA dehydratase	Code: I; COG: COG1024 carnitine racemase	Enoyl-CoA hydratase/isomerase	Code: I; COG: COG1024 carnitine racemase	putative enoyl-CoA dehydratase similarity:fasta; SWALL:CAID_ECOLI (SWALL:P31551); Escherichia coli; carnitinyl-coa dehydratase; caiD; length 260 aa; 260 aa overlap; query 2-260 aa; subject 1-260 aa similarity:fasta; SWALL:Q92NF2 (EMBL:AL591790); Rhizobium meliloti; putative enoyl-coa hydratase protein; smc01641; length 263 aa; 260 aa overlap; query 1-260 aa; subject 4-263 aa	Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase: (1.8e-62) KEGG: sil:SPOA0285 carnitinyl-CoA dehydratase, ev=1e-130, 87% identity	probable enoyl-CoA hydratase protein Similar to SMc01641 [Sinorhizobium meliloti] Similar to swissprot:Q92NF2 Putative location:bacterial inner membrane Psort-Score: 0.1128; go_function: catalytic activity [goid 0003824]; go_function: lyase activity [goid 0016829]; go_function: enoyl-CoA hydratase activity [goid 0004300]; go_process: metabolism [goid 0008152]	Carnitinyl-CoA dehydratase	Carnitinyl-CoA dehydratase	carnitinyl-CoA dehydratase	Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase KEGG: bur:Bcep18194_C7186 3-hydroxyacyl-CoA dehydrogenase	Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase KEGG: stm:STM0070 carnitinyl-CoA dehydratase	Putative enoyl CoA hydratase	carnitine racemase Code: I; COG: COG1024	Putative enoyl CoA hydratase	carnitinyl-CoA dehydratase	Carnitinyl-CoA dehydratase	PFAM: Enoyl-CoA hydratase/isomerase KEGG: slo:Shew_2672 enoyl-CoA hydratase/isomerase Enoyl-CoA hydratase/isomerase	KEGG: slo:Shew_2672 enoyl-CoA hydratase/isomerase enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/isomerase	
ECOLI00033	Probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Residues 1 to 522 of 522 are 98 pct identical to residues 1 to 522 of a 522 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285732.1 probable crotonobetaine-carnitine-CoA ligase	IPR000873: AMP-dependent synthetase and ligase crotonobetaine/carnitine-CoA ligase	similar to Salmonella typhi CT18 probable crotonobetaine/carnitine-CoA ligase probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Code: IQ; COG: COG0318 probable crotonobetaine/carnitine-CoA ligase	Code: IQ; COG: COG0318 probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	probable crotonobetaine/carnitine-CoA ligase Code: IQ; COG: COG0318	crotonobetaine/carnitine-CoA ligase	Putative uncharacterized protein	Probable crotonobetaine/carnitine-CoA ligase	Predicted crotonobetaine CoA ligase:carnitine CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	AMP-dependent synthetase and ligase	Putative crotonobetaine/carnitine-CoA ligase	Putative uncharacterized protein	Putative uncharacterized protein	Probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Probable crotonobetaine/carnitine-CoA ligase	Crotonobetaine/carnitine-CoA ligase	
ECOLI00034	Crotonobetainyl-CoA:carnitine CoA-transferase	Crotonobetainyl-CoA:carnitine CoA-transferase	Crotonobetainyl-CoA:carnitine CoA-transferase	Residues 1 to 405 of 405 are 99 pct identical to residues 1 to 405 of a 405 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285733.1 l-carnitine dehydratase	l-carnitine dehydratase	similar to Salmonella typhi CT18 L-carnitine dehydratase L-carnitine dehydratase	Crotonobetainyl-CoA:carnitine CoA-transferase	Code: C; COG: COG1804 l-carnitine dehydratase	Crotonobetainyl-CoA:carnitine CoA-transferase	hypothetical protein similarity to COG1804 Predicted acyl-CoA transferases/carnitine dehydratase(Evalue: 1E-89)	Crotonobetainyl-CoA:carnitine CoA-transferase	L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F KEGG: mmc:Mmcs_1669 L-carnitine dehydratase/bile acid-inducible protein F	L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F KEGG: stt:t0073 L-carnitine dehydratase	L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F KEGG: mmc:Mmcs_1669 L-carnitine dehydratase/bile acid-inducible protein F	l-carnitine dehydratase Code: C; COG: COG1804	L-carnitine dehydratase/bile acid-inducible protein F	crotonobetainyl-CoA:carnitineCoA-transferase	PFAM: L-carnitine dehydratase/bile acid-inducible protein F KEGG: slo:Shew_2674 L-carnitine dehydratase/bile acid-inducible protein F L-carnitine dehydratase/bile acid-inducible protein F	KEGG: slo:Shew_2674 L-carnitine dehydratase/bile acid-inducible protein F L-carnitine dehydratase/bile acid-inducible protein F	Putative uncharacterized protein	Crotonobetainyl-CoA:carnitine CoA-transferase	L-carnitine dehydratase/bile acid-inducible protein F	Crotonobetainyl CoA:carnitine CoA transferase	Crotonobetainyl-CoA:carnitine CoA-transferase	Crotonobetainyl-CoA:carnitine CoA-transferase	Crotonobetainyl-CoA:carnitine CoA-transferase	Putative uncharacterized protein	Putative uncharacterized protein	L-carnitine dehydratase	
ECOLI00035	Crotonobetainyl-CoA dehydrogenase	Crotonobetainyl-CoA dehydrogenase	pseudo	Putative acyl-CoA dehydrogenase	Crotonobetainyl-CoA dehydrogenase	Residues 1 to 380 of 380 are 100 pct identical to residues 1 to 380 of a 380 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285734.1 probable carnitine operon oxidoreductase	IPR006089: Acyl-CoA dehydrogenase; IPR006090: Acyl-CoA dehydrogenase, C-terminal; IPR006091: Acyl-CoA dehydrogenase, central domain;IPR006092: Acyl-CoA dehydrogenase, N-terminal putative acyl-CoA dehydrogenase, carnitine metabolism	similar to Salmonella typhi CT18 probable carnitine operon oxidoreductase CaiA probable carnitine operon oxidoreductase CaiA	Crotonobetainyl-CoA dehydrogenase	Code: I; COG: COG1960 probable carnitine operon oxidoreductase	Code: I; COG: COG1960 probable carnitine operon oxidoreductase	Crotonobetainyl-CoA dehydrogenase	Crotonobetainyl-CoA dehydrogenase	Putative acyl-CoA dehydrogenase	acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain KEGG: sdy:SDY_0061 probable carnitine operon oxidoreductase	probable carnitine operon oxidoreductase Code: I; COG: COG1960	crotonobetainyl-CoA dehydrogenase	Acyl CoA dehydrogenase	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain KEGG: slo:Shew_2675 acyl-CoA dehydrogenase domain protein acyl-CoA dehydrogenase domain protein	KEGG: slo:Shew_2675 acyl-CoA dehydrogenase domain protein acyl-CoA dehydrogenase domain protein	Glutaryl-CoA dehydrogenase	Putative uncharacterized protein	Crotonobetainyl-CoA dehydrogenase	Acyl-CoA dehydrogenase domain protein	Crotonobetaine reductase subunit II, FAD-binding	Crotonobetainyl-CoA dehydrogenase	Crotonobetainyl-CoA dehydrogenase	Crotonobetainyl-CoA dehydrogenase	Putative uncharacterized protein	
ECOLI00036	L-carnitine/gamma-butyrobetaine antiporter	L-carnitine/gamma-butyrobetaine antiporter	L-carnitine/gamma-butyrobetaine antiporter	Residues 1 to 504 of 504 are 99 pct identical to residues 1 to 504 of a 504 aa protein from Escherichia coli pir: I41010 caiT protein	IPR000060: BCCT transporter putative BCCT family, betaine/carnitine/choline transport protein	similar to Salmonella typhi CT18 probable carnitine transporter probable carnitine transporter	L-carnitine/gamma-butyrobetaine antiporter	Code: M; COG: COG1292 probable carnitine transporter	BCCT transporter	Code: M; COG: COG1292 probable carnitine transporter	L-carnitine/gamma-butyrobetaine antiporter	L-carnitine/gamma-butyrobetaine antiporter	choline/carnitine/betaine transporter TIGRFAM: choline/carnitine/betaine transporter PFAM: BCCT transporter KEGG: spt:SPA0075 probable carnitine transporter	probable carnitine transporter Code: M; COG: COG1292	L-carnitine/gamma-butyrobetaine antiporter	TIGRFAM: choline/carnitine/betaine transporter PFAM: BCCT transporter KEGG: slo:Shew_2676 choline/carnitine/betaine transporter choline/carnitine/betaine transporter	KEGG: slo:Shew_2676 choline/carnitine/betaine transporter choline/carnitine/betaine transporter	Putative uncharacterized protein	L-carnitine/gamma-butyrobetaine antiporter	Choline/carnitine/betaine transporter	Predicted transporter	L-carnitine/gamma-butyrobetaine antiporter	L-carnitine/gamma-butyrobetaine antiporter	L-carnitine/gamma-butyrobetaine antiporter	Putative uncharacterized protein	Choline/carnitine/betaine transporter precursor	Putative uncharacterized protein	Probable carnitine transporter	L-carnitine/gamma-butyrobetaine antiporter	
ECOLI00037	Protein fixA	Electron transfer flavoprotein beta-subunit	Protein fixA	Protein fixA	Protein fixA	Residues 10 to 277 of 277 are 99 pct identical to residues 1 to 268 of a 268 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285736.1 probable flavoprotein subunit, carnitine metabolism	IPR000049: Electron transfer flavoprotein beta-subunit putative flavoprotein reductase, carnitine metabolism	similar to Salmonella typhi CT18 FixA protein FixA protein	Protein fixA	probable flavoprotein subunit, carnitine metabolism; Code: C; COG: COG2086 FixA	probable flavoprotein subunit; carnitine metabolism; Code: C; COG: COG2086 FixA	Protein fixA	FixA protein	electron transfer flavoprotein beta-subunit PFAM: electron transfer flavoprotein beta-subunit KEGG: sfv:SFV_0035 probable flavoprotein subunit of carnitine metabolism	probable flavoprotein subunit of carnitine metabolism Code: C; COG: COG2086	predicted electron transfer flavoprotein subunit, ETFP adenine nucleotide binding domain	PFAM: Electron transfer flavoprotein alpha/beta-subunit KEGG: slo:Shew_2677 electron transfer flavoprotein beta-subunit Electron transfer flavoprotein alpha/beta-subunit	KEGG: slo:Shew_2677 electron transfer flavoprotein beta-subunit electron transfer flavoprotein beta-subunit	Putative uncharacterized protein	Protein fixA	Electron transfer flavoprotein alpha/beta-subunit	Predicted electron transfer flavoprotein subunit, ETFP adenine nucleotide-binding domain	Protein fixA	Protein fixA	Protein FixA	Electron transfer flavoprotein, beta subunit	Putative uncharacterized protein	Putative uncharacterized protein	FixA protein	
ECOLI04287	Phage T7 exclusion protein	All7133 protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Truncated phage T7 exclusion protein	KAP P-loop domain protein PFAM: KAP P-loop domain protein KEGG: ecp:ECP_0278 truncated phage T7 exclusion protein	Hypothetical protein	Plasmid F pilA-like protein, phage inhibition	
ECOLI00039	Protein fixC	Digeranylgeranylglycerophospholipid reductase	Digeranylgeranylglycerophospholipid reductase	Digeranylgeranylglycerophospholipid reductase 2	FixC protein related	Protein fixC	Protein fixC	Protein fixC	SCG22.19c, possible hydrogenase, len: 422 aa; similar to SW:BCHP_RHOCA (EMBL:Z11165) Rhodobacter capsulatus geranylgeranyl hydrogenase BchP, 391 aa; fasta scores: opt: 386 z-score: 432.9 E(): 1.2e-16; 33.2% identity in 319 aa overlap. Contains Pfam match to entry PF01494 FAD_binding_3, FAD binding domain putative hydrogenase	Residues 1 to 428 of 428 are 99 pct identical to residues 1 to 428 of a 428 aa protein from Escherichia coli K12 ref: NP_414585.1 flavoprotein; electron transport	Geranylgeranyl bacteriochlorophyll reductase-like protein	IPR000103: Pyridine nucleotide-disulphide oxidoreductase, class-II; IPR000205: NAD-binding site; IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I;IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase;IPR003042: Aromatic-ring hydroxylase related to carnitine metabolism	similar to Salmonella typhi CT18 FixC protein FixC protein	NAD binding site	Protein fixC	Geranylgeranyl reductase, plantal and prokaryotic	electron transport; Code: C; COG: COG0644 flavoprotein	flavoprotein; electron transport; Code: C; COG: COG0644 FixC	Probable electron transfer flavoprotein-quinone oxidoreductase YdiS	Geranylgeranyl reductase	FixC protein	putative geranylgeranyl reductase	geranylgeranyl reductase TIGRFAM: geranylgeranyl reductase PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase KEGG: mbu:Mbur_1308 geranylgeranyl reductase	FAD dependent oxidoreductase	PUA domain containing protein	NAD binding site	flavoprotein electron transport; Code: C; COG: COG0644	flavoprotein	Predicted FAD-dependent dehydrogenase, geranylgeranyl reductase family	

ECOLI00041	Putative metabolite transport protein yaaU	Probable major facilitator superfamily (MFS) transporter	Putative metabolite transport protein	Hypothetical metabolite transport protein yaaU	Putative transport protein	Residues 1 to 443 of 464 are 99 pct identical to residues 1 to 443 of a 443 aa protein from Escherichia coli K12 ref: NP_414587.1 putative transport protein	Probable metabolite transport transmembrane protein	IPR003663: Sugar transporter; IPR005828: General substrate transporter; IPR007114: Major facilitator superfamily putative MFS family transport protein	similar to Salmonella typhi CT18 putative metabolite transport protein putative metabolite transport protein	Putative MFS family transport protein	Code: GEPR; COG: COG0477 putative transport protein	Major facilitator superfamily (MFS_1) transporter	Code: GEPR; COG: COG0477 putative transport protein	Hypothetical metabolite transport protein YaaU	Hypothetical metabolite transport protein YaaU	transcript_id=ENSFCAT00000011319	D-xylose proton-symporter	transcript_id=ENSOGAT00000001356	General substrate transporter PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: stm:STM0079 putative transport protein	putative MFS transporter	putative transport protein Code: GEPR; COG: COG0477	Major facilitator family protein transporter	hypothetical metabolite transport protein YaaU	Sugar transporter, MFS superfamily protein	Sugar transporter, MFS superfamily	transcript_id=ENSMICT00000008381	PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: slo:Shew_2681 general substrate transporter General substrate transporter	KEGG: slo:Shew_2681 general substrate transporter general substrate transporter	putative transport protein	
ECOLI00042	Glutathione-regulated potassium-efflux system ancillary protein kefF	Glutathione-regulated potassium-efflux system ancillary protein kefF	Probable NAD(P)H oxidoreductase	NAD(P)H oxidoreductase YRKL	Possible NAD(P)H oxidoreductase	Glutathione-regulated potassium-efflux system ancillary protein kefF	identified by match to protein family HMM PF02525 unnamed protein product	NAD(P)H dehydrogenase	NAD(P)H dehydrogenase, quinone family	NAD(P)H dehydrogenase, quinone family, putative	Glutathione-regulated potassium-efflux system ancillary protein kefF	Lin1898 protein	Residues 1 to 176 of 176 are 99 pct identical to residues 1 to 176 of a 176 aa protein from Escherichia coli K12 ref: NP_414588.1 putative NAD(P)H oxidoreductase	Probable nad(P)h dehydrogenase (Quinone); oxidoreductase protein	putative NAD(P)H oxidoreductase	COG2249 putative NAD(P)H quinone oxidoreductase	hypothetical protein	Putative NADPH-quinone reductase (modulator of drug activity B) MdaB protein	Glutathione-regulated potassium-efflux system ancillary protein kefF	NAD(P)H oxidoreductase	NAD(P)H dehydrogenase (quinone)	Code: R; COG: COG2249 putative NAD(P)H oxidoreductase	Code: R; COG: COG2249 putative NAD(P)H oxidoreductase	putative NADPH-quinone reductase (modulator of drug activity B) COG2249	Code: R; COG: COG2249 putative NAD(P)H oxidoreductase	Glutathione-regulated potassium-efflux system ancillary protein kefF	NAD(P)H dehydrogenase (quinone)	Glutathione-regulated potassium-efflux system ancillary protein kefF	transcript_id=ENSFCAT00000013033	
ECOLI00043	Glutathione-regulated potassium-efflux system protein kefC	Putative Na+/H+ antiporter, CPA2 family	Putative TrkA family protein	Glutathione-regulated potassium-efflux system protein kefC	Sodium/hydrogen exchanger family protein/TrkA domain protein	Probable gluthatione-regulated K+/H+ efflux antiporter	Na+/H+ antiporter NapA	Na+/H+ antiporter	Glutathione-regulated K+ efflux antiporter	Glutathione-regulated potassium-efflux system protein kefC	identified by match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254 sodium/hydrogen exchanger family protein/TrkA domain protein	Na+/H+ antiporter	Glutathione-regulated potassium-efflux system protein	Sodium/hydrogen antiporter	Putative transporter	Putative TrkA family protein	Glutathione-regulated potassium-efflux system protein kefC	Putative uncharacterized protein	TrkA family protein	Residues 1 to 620 of 620 are 99 pct identical to residues 1 to 620 of a 620 aa protein from Escherichia coli O157:H7 ref: NP_308077.1 glutathione-regulated K+ efflux antiporter	NapA-type sodium/hydrogen antiporter	Na_antiporter homologue	Probable glutathione-regulated potassium-efflux system transmembrane protein	Similar to glutathione-regulated potassium-efflux system protein KefC (K(+)/H(+)antiporter) hypothetical protein	conserved gene glutathione-regulated potassium efflux system	Similar to glutathione-regulated potassium-efflux system protein KefC (K(+)/H(+)antiporter) hypothetical protein	identified by similarity to SP:P03819; match to protein family HMM PF02254; match to protein family HMM TIGR00932 glutathione-regulated potassium-efflux system protein	Na+/H+ antiporter-like protein	Na+-H+ antiporter	
ECOLI04293	Protein sopA	Chromosome-partitioning ATPase	ATPase involved in chromosome partitioning, minD/MRP superfamily	putative partitioning protein A	identified by match to TIGR protein family HMM TIGR01281 replication protein RepA	REPLICATION PROTEIN A	Putative chromosome partitioning protein	Protein sopA	replication protein A	Putative plasmid partitioning transcription repressor	ATPase involved in chromosome partitioning, ParA/MinD family, Soj homolog	identified by similarity to PIR:AI3232; match to protein family HMM PF00991 replication protein	IPR006095: Glu/Leu/Phe/Val dehydrogenase plasmid partition protein A	similar to BRA1202, replication protein RepA RepA, replication protein RepA	SopA; putative plasmid partitioning transcription repressor	Plasmid partition protein A	Replication protein A	NifH/frxC family:ATPase, ParA type	plasmid partitioning transcription repressor	Cobyrinic acid a,c-diamide synthase	Cobyrinic acid a,c-diamide synthase	Cobyrinic acid a,c-diamide synthase PFAM: Cobyrinic acid a,c-diamide synthase KEGG: yps:pYV0032 SopA; putative plasmid partitioning transcription repressor	Putative ParA-like partition protein	Putative plasmid partitioning transcription repressor	Partitioning protein, ParA	Cobyrinic acid a,c-diamide synthase PFAM: Cobyrinic acid a,c-diamide synthase KEGG: ypm:pMT113 putative partitioning protein A	Cobyrinic acid a,c-diamide synthase	putative partitioning protein Pfam entry PF00991; similar to Burkholderia fungorum gi:22990152	Plasmid partitioning transcription repressor	
ECOLI00045	Bis(5'-nucleosyl)-tetraphosphatase	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	putative bis(5-nucleosyl)-tetraphosphatase	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Residues 1 to 280 of 280 are 99 pct identical to residues 1 to 280 of a 280 aa protein from Escherichia coli K12 ref: NP_414591.1 diadenosine tetraphosphatase	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	
ECOLI04294	Protein sopB	ParB family protein	Protein sopB	Predicted transcriptional regulator	Putative plasmid partitioning control protein	IPR003115: ParB-like nuclease; IPR004437: ParB-like partition protein; similar to sp:SOPB_ECOLI SopB	SopB; putative plasmid partitioning control protein	DNA-binding protein ParB	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type r : regulator putative transcriptional regulator for chromosome partitioning (parB family protein)	plasmid partitioning control protein	parB-like partition proteins TIGRFAM: parB-like partition proteins PFAM: ParB domain protein nuclease KEGG: cbu:CBUA0038 RepB protein, putative	Putative plasmid partitioning control protein	Plasmid partitioning control protein	SopB stabilization of plasmid protein B; identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; similar to AAO49629	ParB-like partition protein precursor	RepFiA replicon essential function protein	Plasmid partition protein B	ParB-like partition protein	Plasmid partition protein SopB	ParB family protein	ParB-like partition protein	Plasmid partition protein, ParB family	DNA-binding protein ParB	Plasmid partition protein SopB	Protein SopB	Plasmid partition protein B	Partitioning protein ParB	SopB protein	
ECOLI00047	Dimethyladenosine transferase	dimethyladenosine transferase;	Essential 18S rRNA dimethylase (dimethyladenosine transferase), responsible for conserved m6(2)Am6(2)A dimethylation in 3'-terminal loop of 18S rRNA, part of 90S and 40S pre-particles in nucleolus, involved in pre- ribosomal RNA processing. [Source:SGD;Acc:S000006187]	highly similar to sp|P41819 Saccharomyces cerevisiae YPL266w DIM1 rRNA (adenine-N6, N6-)-dimethyltransferase, start by similarity	Dimethyladenosine transferase	gi|2500510|sp|P78697|DIM1_KLULA Kluyveromyces lactis Dimethyladenosine transferase (S-adenosylmethionine-6-N, N -adenosyl(rRNA) dimethyltransferase) (18S rRNA dimethylase), start by similarity	Dimethyladenosine transferase	Probable dimethyladenosine transferase	Probable dimethyladenosine transferase	Dimethyladenosine transferase	Probable dimethyladenosine transferase	Dimethyladenosine transferase	Probable dimethyladenosine transferase	Dimethyladenosine transferase	Dimethyladenosine transferase	DIMETHYLADENOSINE TRANSFERASE;04_0460, DIMETHYLADENOSINE TRANSFERASE, DIM1_yeast, gene found by Glimmer;	Probable dimethyladenosine transferase	Probable dimethyladenosine transferase	Dimethyladenosine transferase	Dimethyladenosine transferase	Dimethyladenosine transferase	highly similar to uniprot|P41819 Saccharomyces cerevisiae YPL266w DIM1;	Probable dimethyladenosine transferase	DEHA2D05038p;highly similar to uniprot|P41819 Saccharomyces cerevisiae YPL266W DIM1 Essential 18S rRNA dimethylase;	Probable dimethyladenosine transferase	Probable dimethyladenosine transferase	Dimethyladenosine transferase	identified by match to PFAM protein family HMM PF00398 dimethyladenosine transferase	Dimethyladenosine transferase	
ECOLI00048	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	Putative pyridoxal phosphate biosynthetic protein PdxA	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase 1	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase 1	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	putative Pyridoxal phosphate biosynthesis protein	Pyridoxal phosphate biosynthetic protein	4-hydroxythreonine-4-phosphate dehydrogenase	identified by match to TIGR protein family HMM TIGR00557 pyridoxal phosphate biosynthetic protein PdxA	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PYRIDOXAL PHOSPHATE BIOSYNTHETIC PROTEIN	4-hydroxythreonine-4-phosphate dehydrogenase	PDXA HOMOLOG	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	4-hydroxythreonine-4-phosphate dehydrogenase	pyridoxal phosphate biosynthetic protein PdxA	4-hydroxythreonine-4-phosphate dehydrogenase	
ECOLI00049	Chaperone surA	Chaperone surA	Chaperone surA	Chaperone surA homolog	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase SurA	Peptidyl-prolyl cis-trans isomerase family protein	SurA	Chaperone surA	Chaperone surA precursor	Chaperone surA	Peptidyl-prolyl cis-trans isomerase	Chaperone surA	putative survival protein SurA	Chaperone surA precursor	Chaperone surA	Chaperone surA	Chaperone surA	Chaperone surA precursor	Chaperone surA	Chaperone surA homolog	Chaperone surA	Chaperone surA	Peptidyl-prolyl cis-trans isomerase, PPIC-type	Chaperone surA precursor	Chaperone surA	Chaperone surA	Peptidyl-prolyl cis-trans isomerase	Chaperone surA homolog	
ECOLI00050	LPS-assembly protein	LPS-assembly protein lptD	LPS-assembly protein lptD	LPS-assembly protein lptD	LPS-assembly protein lptD	LPS-assembly protein lptD	LPS-assembly protein precursor	Organic solvent tolerance protein	LPS-assembly protein lptD	Related to organic solvent tolerance protein	LPS-assembly protein lptD	hypothetical organic solvent tolerance protein	LPS-assembly protein precursor	similar to GB:D10522, SP:P29966, PID:187385, and PID:219894; identified by sequence similarity; putative organic solvent tolerance, putative	Organic solvent tolerance protein, putative	LPS-assembly protein lptD	LPS-assembly protein lptD	LPS-assembly protein lptD	LPS-assembly protein precursor	LPS-assembly protein lptD	LPS-assembly protein lptD	LPS-assembly protein lptD	LPS-assembly protein precursor	ORGANIC SOLVENT TOLERANCE PROTEIN	LPS-assembly protein lptD	LPS-assembly protein lptD	unknown protein	LPS-assembly protein lptD	LPS-assembly protein lptD	
ECOLI00051	DnaJ-like protein djlA	DnaJ-like protein djlA	Putative uncharacterized protein	Putative DnaJ-like protein	DnaJ-like protein djlA	Molecular chaperone, DnaJ family	DnaJ-like protein djlA	Related to heat shock protein DnaJ	Putative DnaJ-related protein	DnaJ-like protein djlA	identified by match to PFAM protein family HMM PF00226 DnaJ domain protein	DnaJ-like protein djlA	DnaJ-like protein djlA	DnaJ-like protein djlA	DnaJ-like protein DjlA, putative	Putative uncharacterized protein	DNAJ-LIKE PROTEIN DJLA	DnaJ-like protein djlA	DnaJ-like protein djlA	DnaJ-like protein djlA	DnaJ-like protein djlA	Residues 16 to 286 of 286 are 100 pct identical to residues 1 to 271 of a 271 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285752.1 putative DNA binding protein	DnaJ-like protein djlA	DnaJ-like protein djlA	Similar to DnaJ-like protein hypothetical protein	conserved gene DNA binding protein DnaJ, heat shock protein	Similar to DnaJ-like protein hypothetical protein	identified by similarity to SP:P31680; match to protein family HMM PF00226 DnaJ-like protein DjlA, putative	identified by similarity to SP:Q45885; match to protein family HMM PF00226 DnaJ domain protein	
ECOLI00052	Putative uncharacterized protein yabP	orf conserved hypothetical protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Non-LEE-encoded type III secreted effector	

ECOLI04309	Uncharacterized protein yubM	Uncharacterized protein yubM	Putative plasmid stabilization protein	Putative uncharacterized protein	Plasmid stabilization protein	IPR003115: ParB-like nuclease; IPR004437: ParB-like partition protein; similar to gp:RMPGR4A_1,prf:2006305A ParB-like nuclease	ParB family protein	ParB-like nuclease	putative plasmid stabilisation protein similarity:fasta; with=UniProt:Q676H9_9RHIZ (EMBL:AY442931); Agrobacterium tumefaciens.; Putative plasmid stabilization protein.; length=669; id 34.933; 667 aa overlap; query 1-657; subject 19-660 similarity:fasta; with=UniProt:Q89Y90_BRAJA (EMBL:BA000040); Bradyrhizobium japonicum.; Bll0065 protein.; length=712; id 54.202; 714 aa overlap; query 1-710; subject 16-712	ParB-like nuclease KEGG: rsp:RSP_3609 ParB-like nuclease, ev=1e-100, 38% identity	putative plasmid stabilization protein similar to mlr9703 [Mesorhizobium loti] Similar to swissprot:Q98NX2 Putative location:bacterial inner membrane Psort-Score: 0.1383; go_component: extrachromosomal DNA [goid 0046821]; go_component: extrachromosomal circular DNA [goid 0005727]; go_function: DNA binding [goid 0003677]; go_process: plasmid partitioning (sensu Bacteria) [goid 0030542]	ParB-like nuclease	Putative uncharacterized protein ycjA	parB-like partition proteins TIGRFAM: parB-like partition proteins PFAM: ParB domain protein nuclease KEGG: mes:Meso_0538 ParB-like partition proteins	ParB domain protein nuclease	conserved hypothetical protein putative transcriptional regulator; similar to AAR05685	ParB domain protein nuclease PFAM: ParB domain protein nuclease KEGG: rme:Rmet_3033 ParB-like nuclease	ParB-like partition protein	ParB-like partition protein	ParB domain protein nuclease	PFAM: ParB domain protein nuclease KEGG: son:SO_A0031 partition protein, ParB family, putative ParB domain protein nuclease	Putative uncharacterized protein	ParB domain protein nuclease	Plasmid partition protein B	ParB-like nuclease	ParB-like partition protein	ParB domain protein nuclease	ParB domain protein nuclease	ParB domain protein nuclease	
ECOLI00055	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	ATP-dependent helicase HepA	ATP-dependent RNA helicase	RNA polymerase-associated protein rapA	putative RNA polymerase-associated protein HepA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	ATP-dependent RNA helicase	Residues 1 to 968 of 968 are 99 pct identical to residues 1 to 968 of a 968 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285755.1 orf, conserved hypothetical protein	RNA polymerase-associated protein rapA	RNA polymerase-associated protein rapA	RNA polymerase-associated protein HepA	conserved gene ATP-dependent RNA helicase	RNA polymerase-associated protein HepA	RNA polymerase associated protein, putative SNF2 family RNA helicase	similar to Salmonella typhi CT18 probable ATP-dependent helicase HepA probable ATP-dependent helicase HepA	RNA polymerase-associated protein rapA	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme RNA helicase	RNA polymerase-associated protein HepA	superfamily II DNA/RNA helicases, SNF2 family	
ECOLI00056	DNA polymerase II	DNA polymerase	DNA polymerase	DNA polymerase delta catalytic subunit	DNA polymerase	DNA POLYMERASE DELTA CATALYTIC (LARGE) CHAIN;09_0430, DNA POLYMERASE DELTA CATALYTIC (LARGE) CHAIN, DPOD_CANAL, gene found by Glimmer;	DNA polymerase 2	DNA polymerase	DNA polymerase	DNA polymerase	DNA polymerase	DNA polymerase 1	DNA polymerase	DNA polymerase	DNA polymerase	DNA polymerase	DNA polymerase	putative DNA polymerase II	DNA polymerase II	DNA polymerase	DNA polymerase	DNA polymerase	DNA polymerase	DNA polymerase	DNA polymerase	DNA polymerase	Residues 1 to 783 of 783 are 99 pct identical to residues 1 to 783 of a 783 aa protein from Escherichia coli K12 ref: NP_414602.1 DNA polymerase II	DNA polymerase	IPR006172: DNA-directed DNA polymerase, family B DNA polymerase II and and 3'--> 5' exonuclease	
ECOLI00057	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	Residues 1 to 231 of 231 are 99 pct identical to residues 1 to 231 of a 231 aa protein from Escherichia coli K12 ref: NP_414603.1 L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	similar to Salmonella typhi CT18 L-ribulose-5-phosphate 4-epimerase L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	Code: G; COG: COG0235 L-ribulose-5-phosphate 4-epimerase	L-ribulose 5-phosphate 4-epimerase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative aldolase or epimerase	Code: G; COG: COG0235 L-ribulose-5-phosphate 4-epimerase	Code: G; COG: COG0235 L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase Code: G; COG: COG0235	L-ribulose-5-phosphate 4-epimerase	Ribulose-5-phosphate 4-epimerase related epimerase and aldolase	L-ribulose 5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	Putative uncharacterized protein	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	Class II aldolase/adducin family protein	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00058	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	InterProMatches:IPR003762; Biological Process: metabolism (GO:0008152), Molecular Function: L-arabinose isomerase activity (GO:0008733) L-arabinose isomerase	L-arabinose isomerase	IPR003762: L-arabinose isomerase L-arabinose isomerase	similar to Salmonella typhi CT18 L-arabinose isomerase L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase AraA protein	L-arabinose isomerase	Code: G; COG: COG2160 L-arabinose isomerase	Code: G; COG: COG2160 L-arabinose isomerase	Code: G; COG: COG2160 L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	putative transcriptional regulator, Fis family	L-arabinose isomerase	L-arabinose isomerase	L-arabinose isomerase	
ECOLI00059	Ribulokinase	Ribulokinase	Ribulokinase	L-ribulokinase	Ribulokinase	Ribulokinase	Ribulokinase	Ribulokinase	Residues 1 to 566 of 566 are 99 pct identical to residues 1 to 566 of a 566 aa protein from Escherichia coli K12 ref: NP_414605.1 L-ribulokinase	Ribulokinase	Ribulokinase	identified by match to protein family HMM PF00370; match to protein family HMM PF02782 L-ribulokinase, putative	Ribulokinase	L-ribulokinase	similar to Salmonella typhi CT18 L-ribulokinase L-ribulokinase	probable L-ribulokinase	Ribulokinase	Ortholog of S. aureus MRSA252 (BX571856) SAR0557 putative L-ribulokinase	probable L-ribulokinase	, predicted protein, len = 564 aa, probably l-ribulokinase; predicted pI = 7.8909; good similarity to several bacterial l-ribulokinase proteins; contains a possible FGGY family of carbohydrate kinases, N-terminal domain and a FGGY family of carbohydrate kinases, C-terminal domain L-ribulokinase, putative	Ribulokinase	Similar to Bacillus subtilis L-ribulokinase AraB TR:O05185 (EMBL:X89408) (560 aa) fasta scores: E(): 1.2e-88, 43.557% id in 551 aa, and to Bacillus halodurans putative L-ribulokinase AraB TR:Q9KBQ3 (EMBL:AP001513) (563 aa) fasta scores: E(): 2.8e-85, 40.693% id in 548 aa putative L-ribulokinase	Code: C; COG: COG1069 L-ribulokinase	identified by similarity to EGAD:98923; match to protein family HMM PF00370; match to protein family HMM PF02782 L-ribulokinase, putative	Code: C; COG: COG1069 L-ribulokinase	L-ribulokinase identified by match to protein family HMM PF00370; match to protein family HMM PF02782	L-ribulokinase	Code: C; COG: COG1069 L-ribulokinase	carbohydrate kinase, FGGY	
ECOLI04325	Protein traB	Conjugative transfer: assembly	plasmid-like sex pilus assembly protein TraB	TraB pilus assembly	Conjugal transfer protein TraB	pilus assembly protein	TraB pilus assembly family protein PFAM: TraB pilus assembly family protein KEGG: dar:Daro_2650 TraB pilus assembly	TraB pilus assembly protein	Sex pilus assembly protein	TraB pilus assembly family protein PFAM: TraB pilus assembly family protein KEGG: sty:HCM1.73 putative plasmid transfer protein	Conjugative transfer assembly protein	TraB conjugal transfer protein; similar to AAO49521; identified by match to protein family HMM PF06447	TraB pilus assembly family protein PFAM: TraB pilus assembly family protein KEGG: eba:ebA6607 plasmid-like sex pilus assembly protein TraB	TraB pilus assembly family protein precursor	TraB pilus assembly family protein precursor	TraB pilus assembly family protein	Type IV secretion-like conjugative transfer system protein TraB	TraB pilus assembly family protein precursor	TraB protein	Type IV conjugative transfer system protein TraB	TraB protein	Conjugal transfer protein, putative	F pilus assembly protein	F pilus assembly protein TraB	Pilus assembly protein	
ECOLI00061	Inner membrane protein yabI	DedA family integral membrane protein	Uncharacterized membrane-associated protein	Hypothetical protein yabI	identified by match to protein family HMM PF00597 dedA family protein	similar to GP:14021160; identified by sequence similarity; putative dedA family protein	Putative membrane protein	best DB hits: BLAST: pir:B75253; DedA family protein - Deinococcus radiodurans (strain; E=2e-38 pir:S76640; hypothetical protein - Synechocystis sp.  (strain PCC; E=1e-33 swissprot:Q48630; APL_LACLC ALKALINE PHOSPHATASE LIKE PROTEIN; E=1e-29 COG: DR2612; COG0586 Uncharacterized membrane-associated protein; E=2e-39 PFAM: PF00452; Apoptosis regulator proteins, Bcl-2; E=0.022 PF00597; DedA family; E=1.1e-09 DedA family protein	Uncharacterized membrane protein BUsg_132	Putative membrane-associated alkaline phosphatase	Putative uncharacterized protein yabI	hypothetical protein	Uncharacterized membrane protein BU139	Residues 1 to 254 of 254 are 99 pct identical to residues 1 to 254 of a 254 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285761.1 orf, conserved hypothetical protein	Putative DedA-family membrane protein	conserved membrane protein YngC	putative DedA family, membrane protein	similar to Salmonella typhi CT18 DedA family integral membrane protein DedA family integral membrane protein	similar to BR1333, dedA family protein dedA family protein	Putative DedA-family membrane protein	Uncharacterized membrane protein bbp_130	Putative DedA family membrane protein	DedA	Code: S; COG: COG0586 conserved hypothetical protein	DedA family	Code: S; COG: COG0586 conserved hypothetical protein	Code: S; COG: COG0586; orf conserved hypothetical protein	DedA family integral membrane protein	Putative DedA-family membrane protein	
ECOLI00062	Thiamine import ATP-binding protein thiQ	Thiamine import ATP-binding protein thiQ	Thiamine import ATP-binding protein thiQ	Thiamine import ATP-binding protein thiQ	Residues 8 to 239 of 239 are 96 pct identical to residues 1 to 232 of a 232 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285762.1 putative ATP-binding component of a transport system	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC-transport protein	similar to Salmonella typhi CT18 hypothetical ABC transporter hypothetical ABC transporter	Thiamine import ATP-binding protein thiQ	Code: H; COG: COG3840 putative ATP-binding component of a transport system	Code: H; COG: COG3840 putative ATP-binding component of a transport system	Code: H; COG: COG3840 putative ATP-binding component of a transport system	Thiamine import ATP-binding protein thiQ	Thiamine import ATP-binding protein thiQ	putative ATP-binding component of a transport system Code: H; COG: COG3840	thiamine transport ATP-binding protein ThiQ	ABC transporter, ATPase subunit, ThiQ subfamily	Putative ATP-binding component of a transport system	Putative uncharacterized protein	Thiamine ABC transporter, ATP-binding protein	ABC transporter, ATPase subunit, ThiQ subfamily	Thiamine ABC transporter, ATP-binding protein	ABC transporter, ATPase subunit, ThiQ subfamily	Thiamine ABC transporter, ATP-binding protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Thiamine ABC transporter, ATP-binding protein	Hypothetical ABC transporter	Thiamine ABC transporter, ATP-binding protein	
ECOLI00063	Thiamine transport system permease protein thiP	Putative uncharacterized protein PH1352	Putative ABC transporter permease protein	ABC transporter, permease protein	Putative uncharacterized protein	Thiamine ABC transporter, permease protein	Transporter	ABC transporter, membrane spanning protein	Putative ABC transporter integral membrane protein	putative thiamine ABC transporter,permease protein	Thiamine transport system permease protein ThiP	Thiamine transport system permease protein thiP	identified by match to PFAM protein family HMM PF03772 thiamine ABC transporter, permease protein	Thiamine ABC transporter, permease protein, putative	Thiamine ABC transporter, permease protein, putative	Thiamine transport system permease protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN	Thiamine transport system permease protein thiP	Putative thiamine ABC transporter, permease protein	Putative transport system permease protein	transport system permease protein	ABC-type Fe3+ transport system, permease component	Residues 1 to 536 of 536 are 98 pct identical to residues 1 to 536 of a 536 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285763.1 putative transport system permease protein	Thiamine transport system permease protein	Thiamine transport system permease protein	Probable thiamine transport system permease protein	Thiamine/thiamine pyrophosphate ABC transporter, permease protein	ABC transporter, permease protein	putative binding-protein-dependent transport system inner membrane component	
ECOLI04331	Protein traC	Plasmid transfer protein	putative sex pilus assembly and synthesis protein TraC	Putative inner-membrane protein traC	conserved gene TraC	Conjugative transfer: assembly	similar to plasmid-like sex pilus assembly protein traC	predicted ATPase; putatative ATPase related to VirB4 (Ti plasmid), possibly an inner membrane peripherally-associated protein; characteristic predicted NTP-binding domains: Walker A (458-465, GKSGAGKS), Walker B (669-674, AILIDE) TraC	Conjugative transfer protein TraC	membrane bound ATPase, putative MCAP_0179, encoded within Tra Island II, has homology to TraE/TrsE orthologs encoded within mobile DNAs.  Contains two membrane spanning regions	F pilus assembly protein TraC	sex pilus assembly protein	TraC protein	F-pilin subunit assembly into extended F pili	Type IV secretory pathway VirB4 components-like protein KEGG: sty:HCM1.77 plasmid transfer protein	Conjugative transfer assembly protein precursor	TraC pilus assembly and synthesis; similar to AAO49527	conserved hypothetical protein KEGG: dar:Daro_2653 hypothetical protein	Type-IV secretion system protein TraC	Putative pillus assembly protein	Type IV secretory pathway VirB4 components-like protein	Conjugative transfer protein TraC	Sex pilus assembly protein	Conjugative transfer protein TraC	F pilus assembly protein	Type-IV secretion system protein TraC	Type IV secretion-like conjugative transfer system protein TraC	Type IV secretory pathway, VirB4 component	Type IV secretion system protein	
ECOLI00065	HTH-type transcriptional regulator sgrR	HTH-type transcriptional regulator sgrR	Lmo2044 protein	Probable ABC transporter, substrate-binding protein	hypothetical ABC transporter periplasmicsolute binding protein	Hypothetical protein yabN	Putative uncharacterized protein	HTH-type transcriptional regulator sgrR	Putative ABC transporter periplasmic solute binding protein	HTH-type transcriptional regulator sgrR	ABC-type uncharacterized transport system, periplasmic component	Residues 8 to 558 of 558 are 99 pct identical to residues 1 to 551 of a 552 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285766.1 putative transport protein	HTH-type transcriptional regulator sgrR	HTH-type transcriptional regulator sgrR	Probable ABC transporter protein	paral putative periplasmic binding protein of transport system	similar to Salmonella typhi CT18 putative ABC transporter periplasmic solute binding protein putative ABC transporter periplasmic solute binding protein	HTH-type transcriptional regulator sgrR	oligopeptide-binding protein OppA	HTH-type transcriptional regulator sgrR	Code: R; COG: COG4533 putative transport protein	Code: R; COG: COG4533 putative transport protein	Code: R; COG: COG4533 putative transport protein	HTH-type transcriptional regulator sgrR	Hypothetical protein	HTH-type transcriptional regulator sgrR	Hypothetical protein	bacterial extracellular solute-binding proteins, family 5 identified by match to protein family HMM PF00496	Hypothetical protein	
ECOLI04334	Protein traU	Plasmid transfer protein	putative sex pilus assembly and synthesis protein TraU	Putative F pilus assembly protein traU	Putative uncharacterized protein	conserved gene TraU	Conjugative transfer: assembly	similar to plasmid-like sex pilus assembly and synthesis protein traU	TraU	putative conjugative transfer and pilus assembly; similar to TraU of F factor (AAC441198); predicted signal cleavage at 22/23, possible periplasmic protein TraU	TraU family protein	putative TraU	Conjugal DNA transfer protein TraU	TraU	F pilus assembly protein TraU	conjugal DNA transfer protein	TraU family protein PFAM: TraU family protein KEGG: dar:Daro_2325 TraU	TraU protein	Conjugal DNA transfer protein	TraU family protein PFAM: TraU family protein KEGG: sty:HCM1.100 plasmid transfer protein	TraU family protein PFAM: TraU family protein KEGG: sty:HCM1.100 plasmid transfer protein	Conjugative transfer assembly protein precursor	TraU conjugal transfer protein; similar to AAO49529; identified by match to protein family HMM PF06834	TraU family protein precursor	Conjugal DNA transfer protein TraU	Conjugal DNA transfer protein TraU	TraU family protein	Type IV secretion-like conjugative transfer system protein TraU	TraU family protein	
ECOLI00066	Sugar efflux transporter A	Residues 1 to 392 of 392 are 97 pct identical to residues 1 to 392 of a 392 aa protein from Escherichia coli K12 ref: NP_414612.1 putative transport protein	MFS family transporter, sugar efflux pump	putative permease of the major facilitator superfamily	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Hypothetical protein precursor	Hypothetical protein	Hypothetical protein precursor	Sugar efflux transporter precursor	Hypothetical protein precursor	Major facilitator superfamily (MFS) permease	Sugar efflux transporter precursor	Sugar efflux protein	Probable multidrug resistance protein	Putative uncharacterized protein	Sugar efflux transporter subfamily	Sugar efflux transporter precursor	Sugar efflux transporter A	Sugar efflux transporter A	Sugar efflux transporter precursor	Putative uncharacterized protein	Putative uncharacterized protein	Major facilitator superfamily MFS_1	Sugar efflux transporter precursor	Sugar efflux transporter precursor	Sugar efflux transporter A	Sugar efflux transporter A	Sugar efflux transporter	
ECOLI00067	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	Related to 3-isopropylmalate dehydratase, small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit LeuD	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	3-isopropylmalate dehydratase small subunit	putative-isopropylmalate dehydratase, small subunit	3-isopropylmalate dehydratase small subunit	
ECOLI00068	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	3-isopropylmalate dehydratase large subunit	
ECOLI00069	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase;	Beta-isopropylmalate dehydrogenase (IMDH), catalyzes the third step in the leucine biosynthesis pathway.  [Source:SGD;Acc:S000000523]	3-isopropylmalate dehydrogenase [Source:GeneDB_Spombe;Acc:SPBC1A4.02c]	gi|417243|sp|P23390|LEU3_KLULA Kluyveromyces lactis 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH), start by similarity	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	DEHA2G10978p;similar to uniprot|P04173 Saccharomyces cerevisiae YCL018W LEU2 Beta-isopropylmalate dehydrogenase;	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase	
ECOLI00070	2-isopropylmalate synthase	2-isopropylmalate synthase 2	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase 2	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase 2	2-isopropylmalate synthase	2-isopropylmalate synthase 2	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase 1	2-isopropylmalate synthase	hypothetical 2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	2-isopropylmalate synthase	
ECOLI04345	Protein traH	Putative pilus-assembly protein	Putative F pilus assembly protein traH	Putative uncharacterized protein	conserved gene TraH	Conjugative transfer: assembly	similar to plasmid like pilus assembly and synthesis protein precursor TraH	putative conjugative transfer; similar to TraH of F factor (AC44185); predicted signal cleavage site (between 23/24); putative periplasmic conjugal transfer protein TraH	TraH family protein	F pilus assembly protein TraH	Putative ATP-binding F pilus assembly protein	TraH family protein PFAM: TraH family protein KEGG: eba:ebA6635 hypothetical protein	conserved hypothetical protein KEGG: gsu:GSU2125 hypothetical protein	TraH pilus assembly protein	TraH family protein PFAM: TraH family protein KEGG: stm:PSLT100 pilus assembly protein	Conjugative transfer assembly protein precursor	TraH family protein precursor	TraH family protein precursor	F pilus assembly protein TraH	F pilus assembly protein TraH	F pilus assembly protein	TraH protein	TraH family protein	Type IV secretion-like conjugative transfer system pilus assembly protein TraH	Putative conjugative transfer protein TraH	putative TraH conjugative transfer protein Similar to Escherichia coli TraH protein precursor SWALL:TRH1_ECOLI (SWALL:P15069) (458 aa) fasta scores: E(): 7.9e-24, 28.44% id in 450 aa	TraH protein	Putative f pilus assembly protein	
ECOLI04346	Protein traG	putative sex pilus assembly and mating pair TraG	Putative conjugative transfer protein traG	Methyl-accepting chemotaxis protein	conserved gene TraG	Conjugative transfer: assembly abd aggregate stability	possible conjugative transfer; similar to TraG of F factor (AC44184); predicted transmembrane domains (5-24, 34-56, 332-354, 364-386, 425-447); putative membrane-associated conjugal transfer protein TraG	TraG-like protein	Putative uncharacterized protein	Mating contact stablization protein TraG	Putative pilus assembly protein	TraG domain protein PFAM: TraG domain protein KEGG: eba:p1B148 sex pilus assembly	Conjugative transfer assembly and aggregate stability protein	TraG pilus assembly protein; similar to YP_190118; identified by match to protein family HMM PF06122	TraG domain protein PFAM: TraG domain protein KEGG: dar:Daro_2331 hypothetical protein	TraG domain protein	Cju26	TraG domain protein	Conjugative transfer protein TraG	F pilus assembly and aggregate stability protein	Protein TraG	TraG domain protein	Type IV secretion-like conjugative transfer system protein TraG	TraG domain protein	Putative conjugative transfer protein TraG	TraG	putative TraG conjugative transfer protein Similar to Escherichia coli TraG protein SWALL:TRG1_ECOLI (SWALL:P33790) (938 aa) fasta scores: E(): 4.6e-18, 24.34% id in 916 aa	TraG protein	Type IV conjugative transfer system protein TraG	
ECOLI04346	Protein traG	putative sex pilus assembly and mating pair TraG	Putative conjugative transfer protein traG	Methyl-accepting chemotaxis protein	conserved gene TraG	Conjugative transfer: assembly abd aggregate stability	possible conjugative transfer; similar to TraG of F factor (AC44184); predicted transmembrane domains (5-24, 34-56, 332-354, 364-386, 425-447); putative membrane-associated conjugal transfer protein TraG	TraG-like protein	Putative uncharacterized protein	Mating contact stablization protein TraG	Putative pilus assembly protein	TraG domain protein PFAM: TraG domain protein KEGG: eba:p1B148 sex pilus assembly	Conjugative transfer assembly and aggregate stability protein	TraG pilus assembly protein; similar to YP_190118; identified by match to protein family HMM PF06122	TraG domain protein PFAM: TraG domain protein KEGG: dar:Daro_2331 hypothetical protein	TraG domain protein	Cju26	TraG domain protein	Conjugative transfer protein TraG	F pilus assembly and aggregate stability protein	Protein TraG	TraG domain protein	Type IV secretion-like conjugative transfer system protein TraG	TraG domain protein	Putative conjugative transfer protein TraG	TraG	putative TraG conjugative transfer protein Similar to Escherichia coli TraG protein SWALL:TRG1_ECOLI (SWALL:P33790) (938 aa) fasta scores: E(): 4.6e-18, 24.34% id in 916 aa	TraG protein	Type IV conjugative transfer system protein TraG	
ECOLI00076	Fructose repressor	Fructose transport system repressor FruR	Transcriptional regulator	Transcriptional regulator, LacI family	Fructose repressor	putative fructose transport system repressor	Fructose repressor	Fructose repressor	Fructose repressor	Product confidence : putative Gene name confidence : hypothetical putative catabolite repressor protein	Fructose repressor FruR, putative	Fructose repressor	Fructose repressor	Transcriptional regulator	Residues 1 to 334 of 334 are 99 pct identical to residues 1 to 334 of a 334 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285776.1 transcriptional repressor of fru operon and others	Putative fructose repressor	Fructose repressor	IPR000843: Bacterial regulatory protein LacI, HTH motif transcriptional repressor of fru operon and others (GlaR/LacI family)	similar to Salmonella typhi CT18 fructose repressor fructose repressor	Putative transcriptional regulator for the control of carbon and energy metabolism	catabolite repressor-activator	Transcriptional regulators PurR protein	Fructose transport system repressor FruR	Fructose repressor	identified by similarity to SP:P21168; match to protein family HMM PF00356; match to protein family HMM PF00532; match to protein family HMM TIGR02417 fructose transport system repressor FruR	identified by similarity to SP:P21168; match to protein family HMM PF00356; match to protein family HMM PF00532; match to protein family HMM TIGR02417 fructose transport system repressor FruR	regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator	Code: K; COG: COG1609 transcriptional repressor of fru operon and others	Code: K; COG: COG1609 transcriptional repressor of fru operon and others	
ECOLI00077	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	Protein mraZ	
ECOLI04349	Protein traD	conjugative transfer protein TraD	Type IV secretory pathway, VirD4 component	conserved gene TraD	TraD protein	Conjugative transfer: DNA transport	TraD protein	putative type IV secretory pathway VirD4 component	putative membrane protein	Hypothetical protein	DNA binding protein TraD	Type IV secretory pathway, VirD4 component	Type IV secretory pathway VirD4 components-like protein KEGG: lpn:lpg2078 TraD	TraD protein	Conjugative transfer DNA transport protein	TraD coupling protein; similar to AAC44181	TraD KEGG: lpn:lpg2078 TraD	Conjugative transfer protein	Type IV secretory pathway VirD4 components-like protein	Type IV conjugative transfer system coupling protein TraD	Type IV secretory pathway VirD4 components-like protein	TRAG family protein	DNA transport	Putative type IV conjugative transfer system coupling protein TraD	Type IV secretion system protein VirD4	Type IV secretion-like conjugative transfer system coupling protein TraD	Type IV secretory pathway, VirD4 component	Type IV secretory pathway VirD4 components-like protein precursor	ATPase involved in conjugal plasmid transfer	
ECOLI04349	Protein traD	conjugative transfer protein TraD	Type IV secretory pathway, VirD4 component	conserved gene TraD	TraD protein	Conjugative transfer: DNA transport	TraD protein	putative type IV secretory pathway VirD4 component	putative membrane protein	Hypothetical protein	DNA binding protein TraD	Type IV secretory pathway, VirD4 component	Type IV secretory pathway VirD4 components-like protein KEGG: lpn:lpg2078 TraD	TraD protein	Conjugative transfer DNA transport protein	TraD coupling protein; similar to AAC44181	TraD KEGG: lpn:lpg2078 TraD	Conjugative transfer protein	Type IV secretory pathway VirD4 components-like protein	Type IV conjugative transfer system coupling protein TraD	Type IV secretory pathway VirD4 components-like protein	TRAG family protein	DNA transport	Putative type IV conjugative transfer system coupling protein TraD	Type IV secretion system protein VirD4	Type IV secretion-like conjugative transfer system coupling protein TraD	Type IV secretory pathway, VirD4 component	Type IV secretory pathway VirD4 components-like protein precursor	ATPase involved in conjugal plasmid transfer	
ECOLI00080	Peptidoglycan synthetase ftsI	Penicillin-binding protein	Penicillin-binding protein 3	Penicillin-binding protein	Penicillin-binding protein 3	Peptidoglycan synthetase ftsI	Putative cell division protein FtsI/penicillin- binding protein	Peptidoglycan synthetase; penicillin-binding protein 3	Penicillin binding protein 2	Putative peptidoglycan synthetase	Penicillin-binding protein B	Penicillin-binding protein 2	FtsI	Penicillin-binding protein 3	Penicillin-binding protein 2	Penicillin-binding protein 2	Penicillin-binding protein	Division specific D,D-transpeptidase/cell division protein ftsI	Penicillin-binding protein 3	Penicillin-binding protein	PbpB protein	Penicillin-binding protein	Penicillin-binding protein	putative division protein FtsI; penicillin-binding protein	Penicillin-binding protein	Cell division protein	Peptidoglycan synthetase ftsI	identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793 penicillin-binding protein	identified by match to PFAM protein family HMM PF00905 penicillin-binding protein	
ECOLI04351	Protein traI	DNA helicase TraI	ATP-dependent exoDNAse, alpha subunit	oriT nicking and unwinding protein	oriT nicking and unwinding protein, fragment	oriT nicking and unwinding protein, fragment	oriT nicking and unwinding protein, fragment	DNA helicase I	Conjugative transfer oriT nicking-unwinding protein	TraI DNA helicase I; similar to YP_190115; identified by match to protein family HMM PF07057	Conjugative transfer relaxase protein TraI	ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein	OriT nicking-unwinding	Type IV secretion-like conjugative transfer relaxase protein TraI	Conjugative relaxase domain protein	TraI protein	Protein TraI	TraI protein	DNA helicase I	OriT nicking and unwinding protein TraI	OriT-specific relaxase; helicase	putative TraI protein	
ECOLI04351	Protein traI	DNA helicase TraI	ATP-dependent exoDNAse, alpha subunit	oriT nicking and unwinding protein	oriT nicking and unwinding protein, fragment	oriT nicking and unwinding protein, fragment	oriT nicking and unwinding protein, fragment	DNA helicase I	Conjugative transfer oriT nicking-unwinding protein	TraI DNA helicase I; similar to YP_190115; identified by match to protein family HMM PF07057	Conjugative transfer relaxase protein TraI	ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein	OriT nicking-unwinding	Type IV secretion-like conjugative transfer relaxase protein TraI	Conjugative relaxase domain protein	TraI protein	Protein TraI	TraI protein	DNA helicase I	OriT nicking and unwinding protein TraI	OriT-specific relaxase; helicase	putative TraI protein	
ECOLI04351	Protein traI	DNA helicase TraI	ATP-dependent exoDNAse, alpha subunit	oriT nicking and unwinding protein	oriT nicking and unwinding protein, fragment	oriT nicking and unwinding protein, fragment	oriT nicking and unwinding protein, fragment	DNA helicase I	Conjugative transfer oriT nicking-unwinding protein	TraI DNA helicase I; similar to YP_190115; identified by match to protein family HMM PF07057	Conjugative transfer relaxase protein TraI	ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein	OriT nicking-unwinding	Type IV secretion-like conjugative transfer relaxase protein TraI	Conjugative relaxase domain protein	TraI protein	Protein TraI	TraI protein	DNA helicase I	OriT nicking and unwinding protein TraI	OriT-specific relaxase; helicase	putative TraI protein	
ECOLI00084	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	identified by match to TIGR protein family HMM TIGR00031 UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	UDP-N-acetylmuramoylalanine--D-glutamate ligase	
ECOLI00085	Cell division protein ftsW	Cell division protein ftsW	Probable FtsW-like protein	Cell division protein FtsW	Cell division protein FtsW	Bacterial cell division membrane protein FtsW	Cell division protein, ftsW/rodA/spove family	Cell division protein FtsW	Stage V sporulation protein E	Bacterial cell division membrane protein	Cell division protein ftsW	Stage V sporulation protein E	Cell division protein FtsW	Cell division protein FtsW	Cell division protein ftsW	identified by match to protein family HMM PF01098 stage V sporulation protein E	Cell cycle protein, FtsW/RodA/SpoVE family	Cell division protein FtsW	Cell division protein FtsW	Cell division protein	Cell division protein ftsW	Cell division protein FtsW	stage V sporulation protein E	Putative cell division protein	Cell division protein FtsW	Cell division protein FtsW	Putative cell division protein	Cell division protein ftsW	CDS_ID OB1470; required for spore cortex synthesis stage V sporulation protein E	
ECOLI00086	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	similar to GB:M25380, GB:Y00749, GB:J05008, SP:P05305, PID:182259, PID:31255, PID:556202,  and PID:556203; identified by sequence similarity; putative UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG, putative	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase	
ECOLI00087	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--alanine ligase	UDP-N-acetylmuramate-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--L-alanine ligase	
ECOLI00088	D-alanine--D-alanine ligase B	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase B	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase B	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase B	D-alanine--D-alanine ligase A	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	hypothetical D-alanine-D-alanine ligase B	D-alanine--D-alanine ligase B	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase A	D-alanine--D-alanine ligase B	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase B	D-alanine--D-alanine ligase B	D-alanine--D-alanine ligase	
ECOLI00089	Cell division protein ftsQ	Cell division protein	Cell division protein ftsQ homolog	Cell division protein FtsQ	FtsQ	Cell division protein FtsQ	Cell division septal protein FtsQ	Cell division protein FtsQ	Cell division protein FtsQ	hypothetical cell division protein FtsQ	Cell division protein ftsQ	Cell division protein FtsQ	Putative cell division protein FtsQ	Putative cell division protein	Cell division protein FtsQ	Cell division protein	Cell division protein FtsQ, putative	Putative cell division protein FtsQ	Cell division protein FtsQ	Cell division protein FtsQ	Cell division protein; ingrowth of wall at septum	Cell division protein	Cell division protein FtsQ	Residues 1 to 276 of 276 are 99 pct identical to residues 1 to 276 of a 276 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285789.1 cell division protein; ingrowth of wall at septum	Cell division protein FtsQ	FtsQ protein	Cell division protein	Cell division protein FtsQ	conserved gene cell division protein FtsQ	
ECOLI00090	Cell division protein ftsA	Cell division protein ftsA	Cell division protein FtsA	Cell division protein	Cell division protein	Cell division protein ftsA	Cell division protein FtsA	Cell division protein FtsA	Cell division protein FtsA	Cell division protein	Cell division protein ftsA	Cell division protein FtsA	Cell division protein ftsA	Cell division protein ftsA	FtsA	Cell division protein ftsA	Cell division protein FtsA	Cell division protein FtsA, putative	Cell division protein FtsA	Cell division protein FtsA	Cell division protein ftsA	Cell division protein ftsA	Cell division protein ftsA	Cell division protein FtsA	Cell division protein FtsA	Probable cell division protein FtsA	FtsA protein	Cell division protein FtsA	Cell division protein ftsA	
ECOLI00091	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ homolog 1	Cell division protein ftsZ	Cell division protein	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ homolog 1	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ homolog 1	Cell division protein ftsZ homolog 1	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	Cell division protein ftsZ	
ECOLI00092	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	similar to GB:M86608; identified by sequence similarity; putative UDP-3-0-(3-hydroxymyristoyl) N-acetylglcosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-0-acyl N-acetylglucosamine deacetylase	UDP-3-0-acyl N-acetylglucosamine deacetylase	UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-0-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	Probable UDP-3-O-3-hydroxymyristoyl N- acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	putative UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	similar to GB:X62083, GB:M80613, SP:P25440, PID:1370115, PID:182769, PID:2181873, PID:2181875, PID:31472, and PID:577293; identified by sequence similarity; putative UDP-3-0-acyl N-acetylglucosamine deacetylase	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	
ECOLI00093	Secretion monitor	Secretion monitor precursor	Secretion monitor	Secretion monitor	Residues 27 to 221 of 221 are 98 pct identical to residues 1 to 195 of a 195 aa protein from Escherichia coli K12 gb: AAC73208.1 orf, conserved hypothetical protein	Secretion monitor	Secretion monitor	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Secretion monitor	Secretion monitor	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Secretion monitor	Hypothetical protein precursor	Secretion monitor	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	SecA regulator SecM	Secretion monitor family proten precursor	Secretion monitor precursor	Putative uncharacterized protein	Secretion monitor protein	Secretion monitor family proten	Regulator of secA translation	
ECOLI00094	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Preprotein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	identified by match to PFAM protein family HMM PF04227 preprotein translocase SecA subunit	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	Preprotein translocase subunit SecA	Protein translocase subunit secA	Protein translocase subunit secA	Protein translocase subunit secA	
ECOLI00095	Mutator mutT protein	Mutator MutT protein	Mutator mutT protein	MutT	NTP pyrophosphohydrolase	7,8-dihydro-8-oxoguanine-triphosphatase	hypothetical mutator MutT protein	Probable pyrophosphohydrolase	Mutator mutT protein	Mutator MutT protein	Mutator mutT protein	Mutator protein	Mutator mutT protein	mutator protein	Mutator MutT protein	7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions	Mutator mutT protein	7,8-dihydro-8-oxoguanine-triphosphatase	Mutator mutT protein	NTP pyrophosphohydrolase	Residues 1 to 129 of 129 are 98 pct identical to residues 1 to 129 of a 129 aa protein from Escherichia coli K12 ref: NP_414641.1 7,8-dihydro-8-oxoguanine-triphosphatase; prefers dGTP, causes AT-GC transversions	Mutator protein MutT	Mutator mutT protein	Mutator protein MutT	Mutator protein MutT	MutT putative mutator protein	IPR000086: NUDIX hydrolase; IPR003561: Mutator MutT 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP	similar to Salmonella typhi CT18 7,8-dihydro-8-oxoguanine-triphosphatase 7,8-dihydro-8-oxoguanine-triphosphatase	7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP	
ECOLI00096	UPF0243 zinc-binding protein yacG	UPF0243 zinc-binding protein HI0891	UPF0243 zinc-binding protein PM0089	UPF0243 zinc-binding protein PA4530	UPF0243 zinc-binding protein VV2784	UPF0243 zinc-binding protein yacG	Putative uncharacterized protein	conserved hypothetical protein	UPF0243 zinc-binding protein yacG	UPF0243 zinc-binding protein VC_2429	UPF0243 zinc-binding protein SO_0411	UPF0243 zinc-binding protein ECA3804	best DB hits: BLAST: pir:E64732; yacG protein - Escherichia coli (strain K-12) -----; E=9e-08 gb:AAK02173.1; (AE006044) unknown [Pasteurella multocida]; E=8e-05 pir:E82078; conserved hypothetical protein VC2429 [imported] -; E=2e-04 COG: yacG; COG3024 Uncharacterized BCR; E=9e-09 conserved hypothetical protein	UPF0243 zinc-binding protein PSPTO_0922	UPF0243 zinc-binding protein VP2529	UPF0243 zinc-binding protein yacG	UPF0243 zinc-binding protein VV1_1619	Residues 1 to 65 of 65 are 100 pct identical to residues 1 to 65 of a 65 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285797.1 orf, conserved hypothetical protein	UPF0243 zinc-binding protein YPO3432/y0755/YP_0252	UPF0243 zinc-binding protein plu3643	Similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	Similar to conserved hypothetical protein hypothetical protein	UPF0243 zinc-binding protein CV_3823	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0243 zinc-binding protein YPTB0700	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative Zinc-binding protein	non-essential pilus assembly protein	
ECOLI00097	UPF0289 protein yacF	UPF0289 protein yacF	UPF0289 protein BPSL3012	conserved hypothetical protein	UPF0289 protein yacF	UPF0289 protein VC_2428	UPF0289 protein BP3816	UPF0289 protein BB4433	UPF0289 protein SO_0412	UPF0289 protein ECA3803	UPF0289 protein BPP3960	UPF0289 protein BMA2535	UPF0289 protein VP2528	UPF0289 protein yacF	UPF0289 protein CBU_0150	UPF0289 protein VV1_1620	Residues 1 to 247 of 247 are 99 pct identical to residues 1 to 247 of a 247 aa protein from Escherichia coli K12 ref: NP_414644.1 orf, conserved hypothetical protein	UPF0289 protein YPO3431/y0756/YP_0253	UPF0289 protein NE0599	UPF0289 protein RSc2829	UPF0289 protein plu3642	similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	similar to conserved hypothetical protein hypothetical protein	UPF0289 protein CV_3824	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0289 protein YPTB0701	UPF0289 protein MCA2091	
ECOLI00098	Dephospho-CoA kinase	Uncharacterized protein C14G10.01 [Source:GeneDB_Spombe;Acc:SPCC14G10.01]	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	dephospho-CoA kinase, putative	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	DEHA2G13310p;similar to uniprot|Q03941 Saccharomyces cerevisiae YDR196c predicted to catalyze the final step in synthesis of coenzyme A;	identified by match to PFAM protein family HMM PF01121 hypothetical protein	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	Dephospho-CoA kinase	
ECOLI00099	GMP reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	putative GMP reductase	GuaB gene for inosine 5-monophosphase dehydrogenase subunit	GMP reductase	GMP reductase	identified by match to protein family HMM PF00478; match to protein family HMM TIGR01306 guanosine monophosphate reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	CDS_ID OB1310 GMP reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	GMP reductase	Residues 1 to 347 of 347 are 99 pct identical to residues 1 to 347 of a 347 aa protein from Escherichia coli K12 ref: NP_414646.1 GMP reductase	GMP reductase	GMP reductase	
ECOLI00100	Protein transport protein hofC	Protein transport protein hofC homolog	HofC	Type IV pilus (Tfp) assembly protein PilC	Protein transport protein HofC	Type IV pilus assembly protein PilC	putative Type IV pilin biogenesis protein	Protein transport protein hofC	Type IV pilin assembly protein pilC	Type IV pilus biogenesis protein PilC	Protein transport protein	Putative general secretion pathway protein F	Type IV pilus biogenesis protein PilC	Type IV pilin biogenesis protein PilC	Putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake	Type 4 pili biogenesis protein	Type IV pilin biogenesis protein	Residues 1 to 400 of 400 are 98 pct identical to residues 1 to 400 of a 400 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285802.1 putative integral membrane protein HofC; involved in biogenesis of fimbriae, protein transport, DNA uptake	Putative type II secretion system protein	Protein transport protein HofC	IPR003004: Bacterial general secretion pathway protein F putative component in type IV pilin biogenesis	similar to Salmonella typhi CT18 protein transport protein HofC protein transport protein HofC	Putative outer membrane protein export (MTB) sytem, hofC subunit	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type m : membrane component type 4 fimbrial assembly protein	pilus assembly protein PilC	Similar to: HI0297, HOFC_HAEIN putative type IV pilin secretion protein	General secretory pathway protein F HofF protein	Type IV pili biogenesis protein PilC	Similar to Q888U1 Type IV pilus biogenesis protein PilC from Pseudomonas syringae (pv. tomato) (405 aa).  FASTA: opt: 1017 Z-score: 1153.2 E(): 2.4e-56 Smith-Waterman score: 1017; 39.055identity in 402 aa overlap. Termed pilF in N. gonorrhoeae. Type IV pili polytopic inner membrane protein	
ECOLI00101	Protein transport protein hofB	Protein transport protein hofB homolog	Type 4 fimbrial assembly protein pilB	Putative type II protein secretion system E protein	Type IV pilus (Tfp) assembly protein PilB	Protein transport protein HofB	Putative type IV pilus assembly protein	putative type IV pilin assembly protein PilB	Type IV pilus biogenesis protein PilB	Protein transport protein hofB	Type IV pilus assembly protein PilB	Type IV pilus biogenesis protein PilB	Protein transport protein	Type IV pilus biogenesis protein PilB	Type II/IV secretion system protein	Type IV pilin assembly protein PilB	Putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake	Type 4 pili biogenesis protein	Type IV pilin assembly protein PilB	Putative type II secretion system protein	Probable type iv pilus assembly protein	pilus assembly protein PilB	conserved gene (type IV) pilus assembly protein PilB	pilus assembly protein PilB	Type 4 fimbrial biogenesis protein	Pilus biogenesis protein	identified by similarity to GP:4139237; match to protein family HMM PF00437 general secretory pathway protein E	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark pilus biogenesis protein	IPR001482: Bacterial type II secretion system protein E putative integral membrane protein involved in biogenesis of fimbriae (type IV pilin), protein transport, DNA uptake	
ECOLI00102	Prepilin peptidase-dependent protein D	Prepilin peptidase-dependent protein D homolog	Fimbrial protein	Prepilin peptidase dependent protein D	Related to prepilin peptidase dependent protein D	Prepilin peptidase dependent protein D	Prepilin peptidase dependent protein D	Prelipin peptidase dependent protein	Type 4 major prepilin protein	Residues 1 to 146 of 146 are 99 pct identical to residues 1 to 146 of a 146 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285804.1 prelipin peptidase dependent protein	Putative prepilin peptidase dependent protein D	Prepilin peptidase dependent protein D	similar to type IV pilin PilA hypothetical protein	similar to type IV pilin PilA hypothetical protein	Fimbrial protein	IPR001082: Fimbrial protein pilin; IPR001120: Prokaryotic N-terminal methylation site putative major component of type IV pilin, prelipin peptidase dependent protein	similar to Salmonella typhi CT18 prepilin peptidase dependent protein D precursor prepilin peptidase dependent protein D precursor	Putative major component of type IV pilin, prelipin peptidase dependent protein	Fimbrial protein	Similar to: HI0299, PPDD_HAEIN Type IV pilin subunit protein	General secretory pathway proteins G and H and related periplasmic/secreted proteins HofG protein	Prelipin peptidase dependent protein	possible prepilin peptidase dependent protein D	general secretion pathway protein H	Fimbrial protein pilin	Code: NU; COG: COG4969 prelipin peptidase dependent protein	general secretion pathway protein H	putative prelipin peptidase dependent protein	Code: NU; COG: COG4969 prelipin peptidase dependent protein	
ECOLI00103	Nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	Probable nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphate carboxylating	Nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	Nicotinate-mononucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	Quinolinate phosphoribosyltransferase	Probable nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	283aa long hypothetical nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	Putative nicotinate-nucleotide pyrophosphorylase	Quinolinate phosphoribosyl transferase	Nicotinate-nucleotide pyrophosphorylase:Quinolinate phosphoriobsyl transferase	Quinolinate phosphoribosyl transferase:Nicotinate -nucleotide pyrophosphorylase	NadC nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase (Quinolinate phosphoribosyltransferase	hypothetical nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase:Quinolinate phosphoriobsyl transferase	Nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	Probable nicotinate-nucleotide pyrophosphorylase	Nicotinate-nucleotide pyrophosphorylase	
ECOLI00104	1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD	AmpD protein	AmpD	Beta-lactamase expression regulator AmpD	AmpD protein	AmpD protein	N-acetylmuramyl-L-alanine amidase	putative AmpD protein	AmpD protein	AmpD protein	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	AmpD protein	Anhydro-N-acetylmuramyl-tripeptide amidase	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N-acetylmuramoyl-L-alanine amidase	AmpD protein	AmpD protein	Regulates ampC	AmpD protein	Residues 1 to 183 of 183 are 98 pct identical to residues 1 to 183 of a 183 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285806.1 regulates ampC	Putative signalling protein in beta-lactamase regulation	N-acetylmuramoyl-L-alanine amidase	Putative amidase protein	identified by match to protein family HMM PF01510 N-acetylmuramoyl-L-alanine amidase, putative	Anhydro-N-acetylmuramyl-tripeptide amidase	N-acetyl-anhydromuramyl-L-alanine amidase	similar to Salmonella typhi CT18 AmpD protein (anhydro-N-acetylmuramyl-tripeptide amidase) AmpD protein (anhydro-N-acetylmuramyl-tripeptide amidase)	N-acetyl-anhydromuramyl-L-alanine amidase	
ECOLI00105	Protein ampE	AmpE protein	AmpE protein	AmpE protein	Putative membrane-bound sensory transducer	AmpE protein	Regulates ampC	Residues 14 to 297 of 297 are 100 pct identical to residues 1 to 284 of a 284 aa protein from Escherichia coli K12 ref: NP_414653.1 regulates ampC	Putative membrane-bound sensory transducer in beta-lactamase regulation	Signaling protein AmpE	putative transmembrane protein	similar to Salmonella typhi CT18 AmpE protein AmpE protein	Putative transmembrane protein, putative protease	Inner membrane protein AmpE	Membrane protein required for beta-lactamase induction	Putative transmembrane protein	identified by similarity to SP:P13017 putative inner membrane protein AmpE	identified by similarity to SP:P13017 inner membrane protein AmpE	identified by similarity to SP:P13017 inner membrane protein AmpE	Code: V; COG: COG3725 regulates ampC	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative ampicillin resistance protein	regulates ampC; Code: V; COG: COG3725 AmpE	AmpE signaling modulator of AmpD	Code: V; COG: COG3725 regulates ampC	AmpE protein	AmpE protein	Signaling modulator of AmpD, AmpE	Putative membrane-bound sensory transducer in beta-lactamase regulation	Signaling modulator of AmpD, AmpE	
ECOLI00106	Aromatic amino acid transport protein aroP	Aromatic amino acid transport protein aroP	Aromatic amino acid transport protein aroP	Aromatic amino acid transport protein	Aromatic amino acid permease	Aromatic amino acid transport protein aroP	probable amino acid permease	Residues 1 to 457 of 457 are 99 pct identical to residues 1 to 457 of a 457 aa protein from Escherichia coli K12 ref: NP_414654.1 aromatic amino acid transport protein	Aromatic amino acid transport protein	Aromatic amino acid transport protein	IPR002293: Amino acid/polyamine transporter, family I; IPR004840: Amino acid permease APC family, aromatic amino acid transporter	similar to Salmonella typhi CT18 aromatic amino acid transport protein AroP aromatic amino acid transport protein AroP	APC family, aromatic amino acid transporter	Aromatic amino acid transporter	Aromatic amino acid transport protein aroP	identified by match to protein family HMM PF00324 aromatic amino acid permease	Amino acid permease-associated region	Code: E; COG: COG1113 aromatic amino acid transport protein	Code: E; COG: COG1113 aromatic amino acid transport protein	aromatic amino acid transport protein	Amino acid permease-associated region	Code: E; COG: COG1113 aromatic amino acid transport protein	Aromatic amino acid transport protein AroP	Aromatic amino acid transport protein	hypothetical protein similarity to COG1113 Gamma-aminobutyrate permease and related permeases(Evalue: 1E-146)	Aromatic amino acid transport protein AroP	aromatic amino acid transport protein AroP Orthologue of BL0152	Aromatic amino acid transport protein	Aromatic amino acid/H+ symporter	
ECOLI00107	Pyruvate dehydrogenase complex repressor	Probable transcriptional regulator	Pyruvate dehydrogenase complex repressor	Pyruvate dehydrogenase complex repressor	putative pyruvate dehydrogenase complexrepressor	Pyruvate dehydrogenase complex repressor	Pyruvate dehydrogenase complex repressor	Pyruvate dehydrogenase complex repressor	Pyruvate dehydrogenase complex repressor	Pyruvate dehydrogenase complex repressor	Pyruvate dehydrogenase complex repressor	transcriptional regulator	Pyruvate dehydrogenase complex repressor	Residues 12 to 265 of 265 are 99 pct identical to residues 1 to 254 of a 254 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285809.1 transcriptional regulator for pyruvate dehydrogenase complex	Pyruvate dehydrogenase complex repressor	Pyruvate dehydrogenase complex repressor	IPR000524: Bacterial regulatory protein, GntR family transcriptional repressor for pyruvate dehydrogenase complex (GntR family)	similar to Salmonella typhi CT18 pyruvate dehydrogenase complex repressor pyruvate dehydrogenase complex repressor	Transcriptional repressor for pyruvate dehydrogenase complex	GntR-family transcriptional regulator	pyruvate dehydrogenase complex repressor	Pyruvate dehydrogenase complex repressor	identified by similarity to SP:P06957; match to protein family HMM PF00392; match to protein family HMM PF07729 pyruvate dehydrogenase complex repressor	regulatory protein GntR, HTH:GntR, C-terminal	Code: K; COG: COG2186 transcriptional regulator for pyruvate dehydrogenase complex	Evidence 2b : Function of strongly homologous gene; Product type r : regulator transcriptional repressor for pyruvate dehydrogenase complex (GntR family)	transcriptional regulator for pyruvate dehydrogenase complex; Code: K; COG: COG2186 PdhR	pyruvate dehydrogenase complex repressor	GntR-like protein	
ECOLI00108	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase	Pyruvate dehydrogenase E1 component	Putative pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase, E1 component	AceE	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase complex, dehydrogenase component	Pyruvate dehydrogenase complex, E1 component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase E1 component	putative Pyruvate dehydrogenase complex, dehydrogenase component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase, E1 component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase	Pyruvate dehydrogenase e1 component	PMID: 9171401 best DB hits: BLAST: swissprot:Q59637; ODP1_PSEAE PYRUVATE DEHYDROGENASE E1 COMPONENT; E=0.0 embl:CAA75394.1; (Y15124) pyruvate dehydrogenase (lipoamide); E=0.0 swissprot:Q59097; ODP1_ALCEU PYRUVATE DEHYDROGENASE E1 COMPONENT; E=0.0 COG: PA5015; COG2609 Pyruvate dehydrogenase, decarboxylase component; E=0.0 BH2352; COG0021 Transketolase; E=3e-05 PFAM: PF00456; Transketolase, thiamine diphosp; E=0.02 pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase, E1 component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase, E1 component	Pyruvate dehydrogenase, E1 component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase E1 component	Pyruvate dehydrogenase complex, dehydrogenase component	
ECOLI00109	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	Dihydrolipoamide acetyltranferase	Dihydrolipoamide acetyltranferase	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	Pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase	AceF	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	Pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase	Dihydrolipoamide acetyltransferase	Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	putative pyruvate dehydrogenase E2 component dihydrolipoamide acetyltransferase	Pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase	Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	PMID: 6345153 PMID: 6821375 PMID: 2121129 best DB hits: BLAST: pir:C82079; pyruvate dehydrogenase, E2 component, dihydrolipoamide; E=4e-55 pir:H75540; pyruvate dehydrogenase complex, dihydrolipoamide; E=4e-55 gb:AAK02978.1; (AE006128) AceF [Pasteurella multocida]; E=6e-54 COG: VC2413; COG0508 Dihydrolipoamide acyltransferases; E=3e-56 PFAM: PF00364; Biotin-requiring enzyme; E=2.1e-20 PF02817; e3 binding domain; E=8.5e-14 PF00198; 2-oxo acid dehydrogenases acylt; E=8.5e-100 pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	Pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase	Pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase	Pyruvate dehydrogenase	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component	Residues 1 to 626 of 626 are 98 pct identical to residues 1 to 630 of a 630 aa protein from Escherichia coli K12 ref: NP_414657.1 pyruvate dehydrogenase (dihydrolipoyltransacetylase component)	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	AceF protein	Probable dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (E2) protein	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	
ECOLI00110	Dihydrolipoyl dehydrogenase	Dihydrolipoyl dehydrogenase	Pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoyl dehydrogenase	Putative dihydrolipoamide dehydrogenase	putative pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component	Dihydrolipoyl dehydrogenase	dihydrolipoamide dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoamide dehydrogenase	Dihydrolipoamide dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoyl dehydrogenase	PMID: 6352260 PMID: 2211531 best DB hits: BLAST: pir:A82753; dihydrolipoamide dehydrogenase XF0868 [imported] -; E=1e-102 swissprot:O50286; DLDH_VIBPA DIHYDROLIPOAMIDE DEHYDROGENASE (E3; E=1e-102 swissprot:P00391; DLDH_ECOLI DIHYDROLIPOAMIDE DEHYDROGENASE (E3; E=1e-101 COG: XF0868_2; COG1249 Dihydrolipoamide dehydrogenase/glutathione; E=1e-103 PFAM: PF02032; Phytoene dehydrogenase related; E=0.00021 PF00070; Pyridine nucleotide-disulphide; E=2.6e-75 PF02852; Pyridine nucleotide-disulphide; E=8.6e-41 dihydrolipoamide dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoamide dehydrogenase	Pyruvate dehydrogenase, E3 component, dihydrolipoamide dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoyl dehydrogenase	CDS_ID OB1415; dihydrolipoamide dehydrogenase pyruvate dehydrogenase E3	Dihydrolipoyl dehydrogenase	Dihydrolipoyl dehydrogenase	Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes	Dihydrolipoyl dehydrogenase	
ECOLI00111	Uncharacterized protein yacH	Hypothetical protein yacH	Putative uncharacterized protein	Putative membrane protein	similar to Escherichia coli K12 putative membrane protein gi: 1786308 (618 aa). BLAST with identity of 97% in 617 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	putative outer membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative outer membrane protein	putative membrane protein	putative membrane protein	hypothetical protein	Putative uncharacterized protein	Hypothetical integral membrane protein YacH	Hypothetical protein precursor	Hypothetical protein precursor	Hypothetical protein precursor	Hypothetical protein precursor	Putative uncharacterized protein yacH	conserved hypothetical protein KEGG: bcn:Bcen_4476 hypothetical protein	conserved hypothetical protein KEGG: she:Shewmr4_3819 hypothetical protein	conserved hypothetical protein KEGG: son:SO4649 hypothetical protein	putative membrane protein	conserved hypothetical protein KEGG: shm:Shewmr7_3910 hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	conserved hypothetical protein KEGG: son:SO4649 hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative outer membrane protein precursor	
ECOLI00112	Aconitate hydratase 2	Aconitate hydratase 2	Aconitate hydratase 2	Aconitate hydratase 2	Aconitate hydratase	Aconitate hydratase B	Aconitate hydratase B	Aconitate hydratase 2	AcnB	Aconitate hydratase 2	Aconitate hydratase	Aconitate hydrase B	Aconitate hydratase 2	Aconitate hydratase 2	putative aconitate hydratase 2	Aconitate hydratase 2	Aconitate hydratase 2	Putative aconitate hydratase	Putative aconitate hydratase	Aconitate hydratase 2	Aconitate hydratase 2	Aconitate hydratase 2	Putative aconitate hydratase	ACONITATE HYDRATASE	Aconitate hydratase 2	Aconitate hydratase 2	Aconitate hydrase B	Aconitase hydrase B	Residues 52 to 916 of 916 are 99 pct identical to residues 1 to 865 of a 865 aa protein from Escherichia coli K12 ref: NP_414660.1 aconitate hydrase B	
ECOLI00113	UPF0231 protein yacL	UPF0231 protein PM0457	UPF0231 protein VV2750	UPF0231 protein yacL	conserved hypothetical protein	UPF0231 protein yacL	UPF0231 protein VC_0605	UPF0231 protein SO_3983	UPF0231 protein ECA3777	UPF0231 protein VP2494	UPF0231 protein yacL	UPF0231 protein VV1_1657	Residues 1 to 136 of 136 are 98 pct identical to residues 1 to 136 of a 136 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285815.1 orf, conserved hypothetical protein	UPF0231 protein YPO3414/y0772/YP_0271	UPF0231 protein plu3616	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0231 protein YPTB0717	putative coproporphyrinogen III oxidase	Similar to: HI1724, YH24_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	UPF0231 protein yacL	conserved hypothetical protein	Code: S; COG: COG3112 conserved hypothetical protein	Code: S; COG: COG3112 conserved hypothetical protein	Code: S; COG: COG3112; orf conserved hypothetical protein	UPF0231 protein yacL	Uncharacterised conserved protein UCP006287	Uncharacterized conserved protein UCP006287	
ECOLI00114	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylaseproenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	Residues 1 to 264 of 264 are 99 pct identical to residues 1 to 264 of a 264 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285816.1 S-adenosylmethionine decarboxylase	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase, proenzyme	similar to Salmonella typhi CT18 S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosylmethionine decarboxylase proenzyme	S-adenosyl methionine decarboxylase proenzyme	identified by similarity to SP:P09159; match to protein family HMM PF02675 S-adenosylmethionine decarboxylase	identified by similarity to SP:P09159; match to protein family HMM PF02675 S-adenosylmethionine decarboxylase proenzyme	Adenosylmethionine decarboxylase	Code: E; COG: COG1586 S-adenosylmethionine decarboxylase	Adenosylmethionine decarboxylase	
ECOLI00115	Spermidine synthase	highly similar to sp|Q12074 Saccharomyces cerevisiae YPR069c SPE3 putrescine aminopropyltransferase (spermidine synthase) P2.22.f2.1, hypothetical start	Spermidine synthase [Source:GeneDB_Spombe;Acc:SPBC12C2.07c]	highly similar to sp|Q12074 Saccharomyces cerevisiae YPR069c SPE3 putrescine aminopropyltransferase (spermidine synthase), start by similarity	Probable spermidine synthase	Probable spermidine synthase	DEHA2E16456p;similar to uniprot|Q12455 Saccharomyces cerevisiae YLR146C SPE4 Spermine Synthase;	Probable spermidine synthase	Spermidine synthase 1	Spermidine synthase	Probable spermidine synthase	hypothetical spermidine synthase	Probable spermidine synthase	Spermidine synthase	Spermidine synthase	Spermidine synthase 1	Spermidine synthase	Spermidine synthase 2	Spermidine synthase	Spermidine synthase	Spermidine synthase 1	Spermidine synthase 1	Spermidine synthase	Putative spermidine synthase	Spermidine synthase	Spermidine synthase	identified by match to protein family HMM PF01564; match to protein family HMM TIGR00417 spermidine synthase	Spermidine synthase	Spermidine synthase	
ECOLI00116	Uncharacterized protein yacC	Hypothetical protein yacC precursor	Putative exported protein	Putative uncharacterized protein yacC	Residues 17 to 172 of 172 are 98 pct identical to residues 1 to 156 of a 156 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285818.1 yacC	Putative exported protein	Similar to unknown protein YacC of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative exported protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yacC	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yacC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	
ECOLI00117	Blue copper oxidase cueO	Multicopper oxidase	Putative multicopper oxidase, secreted	Periplasmic cell division protein	Putative uncharacterized protein	Blue copper oxidase cueO	Putative multicopper oxidases	Putative multicopper oxidase	Blue copper oxidase cueO	identified by match to TIGR protein family HMM TIGR01480 multicopper oxidase family protein	Mulitcopper oxidase domain protein	PROBABLE BLUE-COPPER PROTEIN YACK	Blue copper oxidase cueO	similar to AX065821-1|CAC26150.1| percent identity: 72 in 497 aa putative oxidase	putative periplasmic oxidoreductase	Residues 14 to 529 of 529 are 98 pct identical to residues 1 to 516 of a 516 aa protein from Escherichia coli K12 ref: NP_414665.1 orf, conserved hypothetical protein	Blue copper oxidase cueO	Putative periplasmic cell division protein	Blue copper oxidase CueO	Cell division protein SufI	Putative multicopper oxidases	identified by match to protein family HMM PF00394; match to protein family HMM TIGR01409 oxidoreductase, putative	IPR002355: Multicopper oxidase, copper-binding site putative multicopper oxidase	similar to Salmonella typhi Ty2 possible multicopper oxidase precursor possible multicopper oxidase precursor	similar to BRA0704, multicopper oxidase family protein multicopper oxidase family protein	Conserved cupredoxin-like protein	Multicopper oxidase family protein	Copper resistance protein, CopA family	Blue copper oxidase cueO	
ECOLI00118	Quinoprotein glucose dehydrogenase	Glucose dehydrogenase	Glucose dehydrogenase	Glucose dehydrogenase	Glucose dehydrogenase	Glucose dehydrogenase	glucose dehydrogenase	Residues 5 to 776 of 776 are 99 pct identical to residues 25 to 796 of a 796 aa protein from Escherichia coli K12 ref: NP_414666.1 glucose dehydrogenase	Glucose dehydrogenase (Pyrroloquinoline-quinone) protein	IPR001479: Bacterial quinoprotein dehydrogenase glucose dehydrogenase	similar to Salmonella typhi CT18 glucose dehydrogenase glucose dehydrogenase	Glucose dehydrogenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme glucose dehydrogenase [pyrroloquinoline-quinone] precursor (Quinoprotein glucose DH)	Glucose dehydrogenase	Membrane-bound glucose dehydrogenase (PQQ)	identified by similarity to SP:P15877; match to protein family HMM PF01011 quinoprotein glucose dehydrogenase	quinoprotein	Code: G; COG: COG4993 glucose dehydrogenase	Code: G; COG: COG4993 glucose dehydrogenase	Pyrrolo-quinoline quinone	glucose dehydrogenase	Glucose dehydrogenase	Glucose dehydrogenase	Glucose dehydrogenase	glucose dehydrogenase	putative glucose dehydrogenase Gcd Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	Quinoprotein glucose dehydrogenase	glucose dehydrogenase Code: G; COG: COG4993	Quinoprotein glucose dehydrogenase	
ECOLI00119	Hypoxanthine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine phosphoribosyltransferase, putative	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Putative hypoxanthine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Putative hypoxanthine-guanine phosphoribosyltransferase	Hpt	Probable purine/pyrimidine phosphoribosyl transferase	Hypoxanthine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine phosphoribosyltransferase	Hypoxanthine phosphoribosyltransferase	Probable hypoxanthine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	Hypoxanthine-guanine phosphoribosyltransferase	
ECOLI00120	Carbonic anhydrase 2	Carbonic anhydrase; poorly transcribed under aerobic conditions and at an undetectable level under anaerobic conditions; involved in non-classical protein export pathway. [Source:SGD;Acc:S000004981]	weakly similar to tr|O94255 Schizosaccharomyces pombe Carbonic anhydrase, start by similarity	Carbonic anhydrase [Source:GeneDB_Spombe;Acc:SPBP8B7.05c]	similar to sp|P53615 Saccharomyces cerevisiae YNL036w NCE3 involved in non-classical protein export pathway singleton, start by similarity	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase 2	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	putative Carbonic anhydrase	Carbonic anhydrase	similar to GP:14277936; identified by sequence similarity; putative carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737] carbonic anhydrase protein, putative	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	CARBONIC ANHYDRASE	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	
ECOLI00121	Uncharacterized ABC transporter ATP-binding protein yadG	ABC transporter, ATP-binding protein	YagD	Probable ATP-binding component of ABC transporter	ABC-type multidrug transport system, ATPase component	Putative ABC transporter, ATP-binding protein	Hypothetical ABC transporter ATP-binding protein	Lmo0667 protein	hypothetical ABC transporterATP-binding protein yadG	Hypothetical ABC transporter ATP-binding protein yadG	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Putative ATP-binding component of a transport system	ABC transporter ATP-binding protein	ABC-type multidrug transport system, ATPase component	Pli0041 protein	ABC transporter, ATP-binding protein	Residues 1 to 308 of 308 are 100 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285823.1 putative ATP-binding component of a transport system	Putative ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein YadG	Highly similar to ATP-binding component of ABC transporter hypothetical protein	Highly similar to ATP-binding component of ABC transporter hypothetical protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC-type multidrug transport system, ATPase component	similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein hypothetical ABC transporter ATP-binding protein	Putative ABC type drug efflux protein, ATP binding	identified by match to protein family HMM PF00005 ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	
ECOLI00122	Inner membrane transport permease yadH	ABC transporter permease protein	Permease	hypothetical protein	ABC-type multidrug transport system, permease component	ABC transporter, permease protein	Putative uncharacterized protein	Probable permease of ABC-2 transporter	ABC-type multidrug transport system, permease component	ABC transporter	ABC transporter integral membrane protein	All4219 protein	Lmo0668 protein	putative permease	Inner membrane transport permease yadH	ABC transporter permease protein	Permease, putative	ABC transporter, permease protein	ABC transporter integral membrane protein	ABC transporter, permease protein	Putative ABC transporter membrane protein	Putative permease	Inner membrane transport permease yadH	ABC transporter permease protein	ABC-type multidrug transport system, permease component	Lin0673 protein	ABC transporter permease protein	Residues 1 to 256 of 256 are 100 pct identical to residues 1 to 256 of a 256 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285824.1 orf, conserved hypothetical protein	Putative ABC transporter, integral membrane protein	
ECOLI00123	Putative phosphotransferase enzyme IIA component yadI	Putative IIA component of PTS system	Lmo0784 protein	Putative PTS system IIA component yadI	Putative PTS enzyme II B component	Lin0777 protein	Residues 1 to 146 of 146 are 98 pct identical to residues 1 to 146 of a 146 aa protein from Escherichia coli K12 ref: NP_414671.1 putative PTS enzyme II B component	putative PTS enzyme	similar to Salmonella typhi CT18 putative PTS system IIA component putative PTS system IIA component	Putative PTS enzyme	Code: G; COG: COG2893 putative PTS system enzyme IIB component	Code: G; COG: COG2893 putative PTS enzyme II B component	Code: G; COG: COG2893 putative PTS enzyme II B component	Putative PTS system IIA component Yadi	PTS system, IIA component identified by match to protein family HMM PF03610	Putative PTS system IIA component YadI	Sorbose-specific PTS uptake system component	phosphotransferase system, fructose subfamily IIA component	PTS system fructose subfamily IIA component PFAM: PTS system fructose subfamily IIA component KEGG: ade:Adeh_0148 phosphotransferase system, fructose subfamily IIA component	putative PTS system IIA component YadI	PTS system fructose subfamily IIA component	PTS system fructose subfamily IIA component	Putative PTS enzyme II B component	PTS system fructose subfamily IIA component	Putative uncharacterized protein	PTS system, IIA component	PTS system fructose subfamily IIA component	Predicted PTS Enzyme IIA	PTS system IIA component domain protein	
ECOLI00124	Uncharacterized protein yadE	Hypothetical protein yadE	Putative uncharacterized protein yadE	Residues 1 to 384 of 384 are 97 pct identical to residues 26 to 409 of a 409 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285826.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative xylanase/chitin deacetylase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein yadE	Putative xylanase/chitin deacetylase	Code: G; COG: COG0726 conserved hypothetical protein	Code: G; COG: COG0726; orf conserved hypothetical protein	YadE protein, polysaccharide deacetylase	Hypothetical protein	Putative uncharacterized protein yadE	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: G; COG: COG0726	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Polysaccharide deacetylase precursor	Putative uncharacterized protein yadE	Putative uncharacterized protein	Polysaccharide deacetylase domain protein	Polysaccharide deacetylase precursor	Predicted polysaccharide deacetylase lipoprotein	Polysaccharide deacetylase family protein	Polysaccharide deacetylase domain protein	Polysaccharide deacetylase precursor	
ECOLI00125	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase	Aspartate 1-decarboxylase precursor	
ECOLI00126	Uncharacterized protein yadD	hypothetical conserved protein	Putative uncharacterized protein yadD	Residues 1 to 300 of 300 are 97 pct identical to residues 1 to 300 of a 300 aa protein from Escherichia coli K12 ref: NP_414674.1 orf, conserved hypothetical protein	Putative transposase	Uncharacterized protein pSLT051	Code: S; COG: COG5464 conserved hypothetical protein	Code: S; COG: COG5464 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG5464; orf conserved hypothetical protein	Putative transposase, YhgA-like	Putative uncharacterized protein yadD	putative transposase KEGG: neu:NE1223 putative transposase	conserved hypothetical protein Code: S; COG: COG5464	conserved hypothetical protein	Putative uncharacterized protein	Predicted transposase	Putative uncharacterized protein	Putative transposase YhgA family protein	Putative ISNCY family transposase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative transposase	Putative transposase	Putative transposase	
ECOLI00127	Pantothenate synthetase	pantoate-beta-alanine ligase;	Pantoate--beta-alanine ligase [Source:GeneDB_Spombe;Acc:SPAC5H10.08c]	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	similar to uniprot|P40459 Saccharomyces cerevisiae YIL145c;	DEHA2E09262p;similar to uniprot|P40459 Saccharomyces cerevisiae YIL145C PAN6 Pantothenate synthase also known as pantoate- beta-alanine ligase;	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantoate--beta-alanine ligase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	Pantothenate synthetase	
ECOLI00128	3-methyl-2-oxobutanoate hydroxymethyltransferase	conserved hypothetical protein;	Ketopantoate hydroxymethyltransferase, required for pantothenic acid biosynthesis, converts 2-oxoisovalerate into 2-dehydropantoate. [Source:SGD;Acc:S000000380]	similar to sp|Q9Y7B6 Emericella nidulans 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.  11) (Ketopantoate hydroxymethyltransferase), hypothetical start	Probable 3-methyl-2-oxobutanoate hydroxymethyltransferase [Source:GeneDB_Spombe;Acc:SPAC5H10.09c]	similar to sp|P38122 Saccharomyces cerevisiae YBR176w ECM31 involved in cell wall biogenesis and architecture singleton, start by similarity	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	similar to uniprot|P38122 Saccharomyces cerevisiae YBR176w ECM31;	3-methyl-2-oxobutanoate hydroxymethyltransferase	DEHA2G09152p;similar to uniprot|P38122 Saccharomyces cerevisiae YBR176W ECM31 Ketopantoate hydroxymethyltransferase;	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase 2	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase	
ECOLI00129	Uncharacterized fimbrial-like protein yadC	Hypothetical fimbrial-like protein yadC	Putative uncharacterized protein	Hypothetical fimbrial adhesin YadC	putative fimbrial adhesin YadC precursor	Fimbrial protein	Predicted fimbrial-like adhesin protein	Putative fimbrial protein	Putative fimbrial protein	Putative uncharacterized protein	Putative fimbrial protein	Putative fimbrial protein	Putative fimbrial protein	Putative uncharacterized protein	pseudo	Putative exported protein, putative fimbrial-like adhesin protein	pseudo	Putative exported protein yadC, putative fimbrial -like adhesin protein	Putative exported protein, putative fimbrial-like adhesin protein	YadC protein	Predicted fimbrial-like adhesin protein	putative fimbrial-like protein yadC precursor	Fimbrial protein	
ECOLI00130	Uncharacterized protein yadK	Protein yadK	Putative fimbrial protein	similar to Salmonella typhi CT18 putative fimbrial protein putative fimbrial protein	putative fimbrial protein	Protein YadK	Putative fimbrial subunit YadK	conserved hypothetical protein	Putative uncharacterized protein	Predicted fimbrial-like adhesin protein	Putative uncharacterized protein	Fimbrial protein precursor	Putative fimbrial protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative fimbrial protein	Putative fimbrial protein	Protein YadK	Fimbrial protein	Fimbrial protein	Putative fimbrial protein	Putative uncharacterized protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	Protein yadK, putative fimbrial-like adhesin	Protein yadK, putative fimbrial-like adhesin	Predicted fimbrial protein	Putative fimbrial-like adhesin protein	Putative fimbrial protein	
ECOLI00131	Uncharacterized protein yadL	Hypothetical protein yadL	Putative fimbrial protein	similar to Salmonella typhi CT18 putative fimbrial protein putative fimbrial protein	putative fimbrial protein	Putative uncharacterized protein	Putative fimbrial subunit YadL	conserved hypothetical protein	Putative fimbrial protein	Predicted fimbrial-like adhesin protein	Fimbrial protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative fimbrial protein	Putative fimbrial protein	Putative fimbrial protein	Fimbrial protein	Putative uncharacterized protein	Putative fimbrial protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein YadL	Putative fimbrial-like adhesin protein YadL	Putative fimbrial-like adhesin protein	YadL protein	Putative fimbrial protein	Predicted fimbrial-like adhesin protein	putative fimbrial protein	
ECOLI00132	Uncharacterized protein yadM	Hypothetical protein yadM	Putative fimbrial protein	similar to Salmonella typhi CT18 putative fimbrial protein putative fimbrial protein	Putative uncharacterized protein	Putative fimbrial subunit YadM	putative fimbrial-like adhesin protein	Predicted fimbrial-like adhesin protein	Putative fimbrial protein precursor	Fimbrial protein	Putative uncharacterized protein	Putative fimbrial protein	Putative fimbrial protein	Putative fimbrial protein	Fimbrial protein	Fimbrial protein	Putative fimbrial protein	Putative uncharacterized protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin protein YadM	Putative fimbrial-like adhesin protein YadM	pseudo	Putative fimbrial-like adhesin exported protein	YadM protein	Putative fimbrial protein	Predicted fimbrial-like adhesin protein	putative fimbrial protein	Predicted fimbrial-like adhesin protein	
ECOLI00133	Outer membrane usher protein htrE	Outer membrane usher protein	Outer membrane usher protein htrE	Putative fimbrial usher protein	similar to Salmonella typhimurium outer membrane usher protein outer membrane usher protein	Putative outer membrane fimbrial usher porin	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative fimbrial usher protein	Fimbrial biogenesis outer membrane usher protein	outer membrane fimbrial usher protein start codon not provided	outer membrane usher protein identified by match to protein family HMM PF00577	Outer membrane usher protein HtrE	Outer membrane usher protein HtrE	fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein KEGG: reu:Reut_A0838 fimbrial biogenesis outer membrane usher protein	Putative fimbrial biogenesis outer membrane usher protein	outer membrane usher protein identified by match to protein family HMM PF00577	Outer membrane usher protein precursor	Fimbrial biogenesis outer membrane usher protein precursor	outer membrane usher protein HtrE precursor	Fimbrial usher protein	Outer membrane usher protein	Fimbrial usher protein	Putative outer membrane usher protein precursor	Predicted outer membrane usher protein	Fimbrial usher protein	Fimbrial biogenesis outer membrane usher protein precursor	Outer membrane usher protein HtrE	Putative uncharacterized protein	Putative uncharacterized protein	Fimbrial biogenesis outer membrane usher protein precursor	
ECOLI00134	Chaperone protein ecpD	Chaperone protein EcpD	Putative fimbria-related chaperone	Chaperone protein ecpD	Putative fimbrial chaperone protein	Chaperone protein ecpD	Chaperone protein	similar to Salmonella typhimurium putative fimbriae; chaparone putative fimbriae; chaparone	Twin-arginine translocation pathway signal	Code: NU; COG: COG3121 probable pilin chaperone similar to PapD	similar to PapD; Code: NU; COG: COG3121 probable pilin chaperone	Fimbrial chaperone protein	chaperone protein EcpD precursor identified by match to protein family HMM PF00345; match to protein family HMM PF02753	Chaperone protein EcpD	Type 1 pili chaperone protein FimC	Periplasmic chaperone EcpD	pili assembly chaperone PFAM: pili assembly chaperone KEGG: reu:Reut_A0839 pili assembly chaperone:bacterial pili assembly chaperone	probable fimbrial chaperone protein ecpD identified by match to protein family HMM PF00345; match to protein family HMM PF02753	Putative pili chaperone protein	Pili assembly chaperone	fimbrial assembly chaperone	Pili assembly chaperone precursor	predicted periplasmic pilin chaperone	Fimbrial assembly chaperone protein	Putative F17-like fimbrial chaperone	Pili assembly chaperone precursor	Gram-negative pili assembly chaperone	Pili assembly chaperone	Fimbrial assembly chaperone protein	
ECOLI00135	Uncharacterized fimbrial-like protein yadN	Hypothetical fimbrial-like protein yadN	Putative fimbrial protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Hypothetical fimbrial-like protein YadN	Putative fimbrial subunit YadN	putative fimbrial-like adhesin protein	Fimbrial protein	Predicted fimbrial-like adhesin protein	Fimbrial protein precursor	Fimbrial protein	Putative uncharacterized protein	Pilin chaperone ecpD2	Fimbrial protein	Pilin chaperone ecpD2	Putative fimbrial protein	Putative uncharacterized protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Predicted fimbrial-like protein	Putative fimbrial-like adhesin exported protein	YadN protein	Putative fimbrial protein	Predicted fimbrial-like adhesin protein	putative fimbrial-like protein	Fimbrial protein	
ECOLI00136	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine -pyrophosphokinase	Putative 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	Possible 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine -pyrophosphokinase	FolK	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	7;8-dihydro-6-hydroxymethylpterin- pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	Probable 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	FolK protein	7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	
ECOLI00137	Poly(A) polymerase	Polynucleotide adenyltransferase	Polynucleotide adenyltransferase	Probable poly(A) polymerase	PolyA polymerase	PcnB	Poly(A) polymerase	PolyA polymerase	Poly(A) polymerase	Putative polynucleotide adenylyltransferase	putative polyA polymerase	Poly A Polymerase	Poly(A) polymerase	PolyA polymerase	Poly(A) polymerase	Poly(A) polymerase	PolyA polymerase	Poly(A) polymerase	Poly(A) polymerase	Poly(A) polymerase	PolyA polymerase	PolyA polymerase	Poly(A) polymerase	Poly(A) polymerase	TRNA nucleotidyltransferase/poly(A) polymerase	Residues 1 to 471 of 472 are 99 pct identical to residues 1 to 471 of a 472 aa protein PCNB_ECOLI sp: P13685 poly(A) polymerase (PAP) (plasmid copy number protein)	Poly(A) polymerase	Poly A polymerase family	Probable polynucleotide adenylyltransferase protein	
ECOLI00138	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutaminyl-tRNA synthetase, putative	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-tRNA Synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	putative glutamyl-tRNA synthetase-relatedprotein	Glutamyl-Q tRNA(Asp) synthetase	similar to GP:15075661; identified by sequence similarity; putative tRNA synthetase, class I	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	pseudo	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	PMID: 3015933 PMID: 2201777 best DB hits: BLAST: pir:E75366; glutamyl-tRNA synthetase-related protein - Deinococcus; E=2e-41 swissprot:O67271; SYE_AQUAE GLUTAMYL-TRNA SYNTHETASE; E=2e-39 gb:AAF49463.1; (AE003527) CG4573 gene product [Drosophila; E=2e-37 COG: DR1687; COG0008 Glutamyl- and glutaminyl-tRNA synthetases; E=2e-42 PFAM: PF00749; tRNA synthetases class I (E and; E=2.4e-11 glutamyl-tRNA synthetase-related protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL PROTEIN	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	Glutamyl-Q tRNA(Asp) synthetase	
ECOLI00139	DnaK suppressor protein	DnaK suppressor protein homolog	DnaK suppressor protein	DksA	Suppressor protein DksA	Putative uncharacterized protein	DnaK suppressor protein	DnaK suppressor protein	Probable DnaK suppressor protein	putative DnaK suppressor protein	DnaK suppressor protein	DnaK suppressor protein, putative	DnaK suppressor protein	DnaK suppressor protein	Dnak suppressor protein	DnaK suppressor protein homolog	DnaK suppressor protein	DKSA-LIKE PROTEIN	DnaK suppressor protein	DnaK suppressor protein	DnaK suppressor protein	DnaK suppressor protein homolog	DnaK suppressor protein	Residues 7 to 157 of 157 are 100 pct identical to residues 1 to 151 of a 151 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285841.1 dnaK suppressor protein	DnaK suppressor protein homologue	Prokaryotic dksA/traR C4-type zinc finger	DnaK suppressor protein	Similar to DnaK suppressor protein hypothetical protein	conserved gene DnaK suppressor protein	
ECOLI00140	Sugar fermentation stimulation protein A	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein A	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein homolog	putative sugar fermentation stimulation protein	Sugar fermentation stimulation protein homolog	Sugar fermentation stimulation protein A	similar to GB:X02751, GB:L00043, GB:X53291, GB:X53292, GB:X05564, GB:X05565, GB:L00040, GB:L00041, GB:L00042, GB:M10055, GB:K03211, GB:M25898, GB:S68580, GB:X07440, GB:X61282, GB:X00645, SP:P01111, SP:P01112, PID:1335234, PID:1335235, PID:1335236, PID:1335287, PID:190927, PID:190938, PID:35092, PID:35103, PID:465130, PID:553520, PID:553633, PID:553635, PID:553638, PID:825697, and PID:929658; identified by sequence similarity; putative sugar fermentation stimulation protein	
ECOLI00141	2'-5'-RNA ligase	2'-5' RNA ligase	2`-5` RNA ligase, putative	2'-5' RNA ligase	2'-5' RNA ligase	2'-5' RNA ligase	Putative 2'-5' RNA ligase	Putative uncharacterized protein	2'-5' RNA ligase	Putative 2'-5' RNA ligase	Putative uncharacterized protein yadP	Residues 1 to 179 of 179 are 98 pct identical to residues 1 to 179 of a 179 aa protein from Escherichia coli K12 ref: NP_414689.1 orf, conserved hypothetical protein	Putative 2'-5' RNA ligase	Putative 2'-5' RNA ligase	2'-5' RNA ligase	2'-5' RNA ligase	2'-5' RNA ligase	similar to Salmonella typhi CT18 2'-5' RNA ligase 2'-5' RNA ligase	Putative 2'-5' RNA ligase	Putative 2'-5' RNA ligase	2'-5' RNA ligase, putative	2'-5' RNA ligase	2'-5' RNA ligase	2',5' RNA ligase	2',5' RNA ligase	2',5' RNA ligase	Code: J; COG: COG1514 conserved hypothetical protein	identified by similarity to SP:P37025; match to protein family HMM PF02834; match to protein family HMM TIGR02258 putative 2'-5' RNA ligase	2',5' RNA ligase	
ECOLI00142	ATP-dependent RNA helicase hrpB	ATP-dependent helicase HrpB	ATP-dependent helicase	ATP-dependent RNA helicase	Putative ATP-dependent RNA helicase	Putative HrpA-like helicase	Helicase, putative	Probable ATP-dependent helicase	ATP-dependent helicase HrpB	ATP-dependent helicase	Helicase	ATP-dependent helicase HrpB	Related to ATP-dependent helicase	HrpA-like helicases	hypothetical ATP-dependent helicase HrpB	Helicase	ATP-dependent helicase hrpB	ATP-dependent helicase HrpB	ATP-dependent helicase HrpB	ATP-dependent helicase HrpB	ATP-dependent helicase	PMID: 10322435 PMID: 9862990 best DB hits: BLAST: pir:B83150; probable ATP-dependent helicase PA3961 [imported] -; E=1e-113 gb:AAC45544.1; (U49051) HelO [Sinorhizobium meliloti]; E=1e-110 pir:E82708; ATP-dependent helicase XF1229 [imported] - Xylella; E=1e-107 COG: PA3961; COG1643 HrpA-like helicases; E=1e-114 PFAM: PF00270; DEAD/DEAH box helicase; E=0.19 PF00271; Helicase conserved C-terminal; E=3.7e-12 ATP-dependent helicase	predicted by Codon_usage predicted by Homology predicted by FrameD ATP-DEPENDENT HELICASE PROTEIN	ATP-dependent helicase	ATP-DEPENDENT HELICASE HRPB	ATP-dependent helicase HrpB	Putative ATP-dependent helicase	Helicase, ATP-dependent	similar to AJ414156-170|CAC92624.1| percent identity: 35 in 796 aa putative ATP-dependent helicase	
ECOLI00143	Penicillin-binding protein 1B	Probable penicillin-binding protein	PonB	Membrane carboxypeptidase	Penicillin-binding protein 1b	Penicillin-binding protein	Penicillin-binding protein 1B	Penicillin-binding protein 1B	Penicillin-binding protein 1B	Penicillin-binding protein 1b	Penicillin-binding protein, 1A family	Penicillin-binding protein 1B	Peptidoglycan synthetase; penicillin-binding protein 1B	Penicillin-binding protein 1B	Membrane carboxypeptidase	Residues 6 to 849 of 849 are 99 pct identical to residues 1 to 844 of a 844 aa protein from Escherichia coli K12 ref: NP_414691.1 peptidoglycan synthetase; penicillin-binding protein 1B	Penicillin-binding protein 1B	MrcB protein	Penicillin-binding protein 1B	Penicillin-binding protein 1b; peptidoglycan synthetase	IPR001264: Glycosyl transferase, family 51 transpeptidase of penicillin-binding protein 1b (peptidoglycan synthetase)	similar to Salmonella typhi CT18 penicillin-binding protein 1b; peptidoglycan synthetase penicillin-binding protein 1b; peptidoglycan synthetase	Bifunctional multimodular MrcB: tglycosyl transferase of penicillin-binding protein 1b	PBP-1b; PBP1b; Murein polymerase; peptidoglycan glycosyltransferase; peptidoglycan TGase; DD-transpeptidase; Similar to: HI1725, PBPB_HAEIN penicillin-binding protein 1B	Membrane carboxypeptidase (penicillin-binding protein) MrcA protein	penicillin-binding protein 1B Peptidoglycan synthetase	Penicillin-binding protein 1B	Transpeptidase of penicillin-binding protein 1b	bifunctional; ortholog to Escherichia coli bnum: b0149; MultiFun: Cell processes 5.1, 5.6.4; Cell structure 6.2; Metabolism 1.6.7; transpeptidase penicillin-binding protein 1b: glycosyl transferase	
ECOLI00144	Ferrichrome-iron receptor	Outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80	Residues 1 to 747 of 747 are 99 pct identical to residues 1 to 747 of a 747 aa protein from Escherichia coli K12 ref: NP_414692.1 outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80	IPR000531: TonB-dependent receptor protein outer membrane protein receptor / transporter for ferrichrome, colicin M, and phages T1, T5, and phi80	Outer membrane protein receptor , transporter for ferrichrome, colicin M, and phages T1, T5, and phi80	Code: P; COG: COG1629 outer membrane protein receptor/transporter for ferrichrome, colicin M, and phages T1, T5, and phi80	transporter for ferrichrome, colicin M, and phages T1, T5, and phi80; Code: P; COG: COG1629 outer membrane protein receptor	Code: P; COG: COG1629 outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80	Ferrichrome-iron receptor	TonB-dependent receptor, plug precursor	Ferrichrome-iron receptor FhuA	outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 Code: P; COG: COG1629	ferrichrome outer membrane transporter	TonB-dependent siderophore receptor precursor	Outer membrane pore protein, receptor for ferrichrome, colicin M, and phages T1, T5 and phi80	Putative uncharacterized protein	Ferrichrome-iron receptor	Ferrichrome outer membrane transporter	TonB-dependent siderophore receptor precursor	Ferrichrome-iron receptor FhuA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Ferrichrome-iron receptor	Ferrichrome-iron receptor	Ferrichrome-iron receptor	Ferrichrome-iron receptor	Ferrichrome-iron receptor	Ferrichrome-iron receptor	
ECOLI00145	Ferrichrome transport ATP-binding protein fhuC	ABC-type hydroxamate-dependent iron transport system, ATPase component	Ferrichrome transport ATP-binding protein FhuC	Ferrichrome transport ATP-binding protein fhuC	Ferrichrome transport ATP-binding protein	ATP-binding component of hydroxymate-dependent iron transport	ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component	Residues 15 to 279 of 279 are 99 pct identical to residues 1 to 265 of a 265 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285847.1 ATP-binding component of hydroxymate-dependent iron transport	Ferrichrome transport ATP-binding protein FhuC	Ferrichrome-iron transporter	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp_bind), hydroxymate-dependent iron transport	similar to Salmonella typhi CT18 ferrichrome transport ATP-binding protein FhuC ferrichrome transport ATP-binding protein FhuC	ABC type hydroxymate-dependent iron transport ATP binding protein	ferrichrome transport ATP-binding protein FhuC	Hydroxymate-dependent iron transport	Code: PH; COG: COG1120 ATP-binding component of hydroxymate-dependent iron transport	Code: PH; COG: COG1120 ATP-binding component of hydroxymate-dependent iron transporter	Code: PH; COG: COG1120 ATP-binding component of hydroxymate-dependent iron transport	siderophore receptor FhuC similarity:fasta; SWALL:O86461 (EMBL:AJ007906); Rhizobium leguminosarum; FhuC; fhuC; length 268 aa; 265 aa overlap; query 5-269 aa; subject 4-268 aa	Ferrichrome transport ATP-binding protein FhuC	Ferrichrome transport ATP-binding protein FhuC	Ferrichrome transport ATP-binding protein FhuC	ABC transporter related PFAM: ABC transporter related SMART: AAA ATPase KEGG: rsp:RSP_1437 ABC Fe+3 hydroxamate (ferrichrome) transporter, ATPase subunit	ABC transporter related PFAM: ABC transporter related SMART: AAA ATPase KEGG: stm:STM0192 ABC superfamily (atp_bind), hydroxymate-dependent iron transport	Ferrichrome transport ATP-binding protein FhuC	ABC Fe+3 siderophore/cobalamin transporter, ATPase subunit	ferrichrome ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	Ferrichrome transport ATP-binding protein FhuC	ATP-binding component of hydroxymate-dependent iron transport Code: PH; COG: COG1120	
ECOLI00146	Ferrichrome-binding periplasmic protein	ABC transporter, substrate binding protein	Ferrichrome-binding periplasmic protein	Periplasmic iron-compound-binding protein of iron(III) ABC transporter	Ferrichrome-binding periplasmic protein	Ferrichrome-binding periplasmic protein	Hydroxamate-dependent iron uptake, cytoplasmic membrane component	ABC-type Fe3+-hydroxamate transport system, periplasmic component	Residues 1 to 281 of 281 are 98 pct identical to residues 16 to 296 of a 296 aa protein from Escherichia coli K12 ref: NP_414694.1 hydroxamate-dependent iron uptake, cytoplasmic membrane component	Ferrichrome-binding periplasmic protein	Ferrichrome-iron ABC transporter	Fe3+-siderophore ABC transporter substrate-binding protein	IPR002453: Beta tubulin ABC superfamily (bind_prot), hydroxamate-dependent iron uptake	similar to Salmonella typhi CT18 ferrichrome-binding periplasmic protein precursor ferrichrome-binding periplasmic protein precursor	ABC type hydroxamate-dependent iron uptake ATP binding protein	ferrichrome-binding protein	ABC-type Fe3+-siderophores transport systems, periplasmic components FecB protein	Hydroxamate-dependent iron uptake	Code: P; COG: COG0614 hydroxamate-dependent iron uptake, cytoplasmic membrane component	ABC Fe+3 hydroxamate (ferrichrome) transporter, periplasmic siderophore binding protein	Code: P; COG: COG0614 hydroxamate-dependent iron uptake, cytoplasmic membrane component	Twin-arginine translocation pathway signal	periplasmic binding protein	Code: P; COG: COG0614 hydroxamate-dependent iron uptake, cytoplasmic membrane component	siderophore receptor component FhuD similarity:fasta; SWALL:O86462 (EMBL:AJ007906); Rhizobium leguminosarum; FhuD; length 301 aa; 294 aa overlap; query 1-292 aa; subject 9-301 aa similarity:fasta; SWALL:Q7B3C6 (EMBL:AJ007906); Rhizobium leguminosarum; FhuD; length 293 aa; 294 aa overlap; query 1-292 aa; subject 1-293 aa	periplasmic binding protein	ferrichrome-iron ABC transporter, substrate-binding protein Similar to FhuD [Rhizobium leguminosarum] Similar to entrez-protein:CAA07723.1 Putative location:bacterial inner membrane Psort-Score: 0.1044; go_function: iron ion transporter activity [goid 0005381]; go_process: high affinity iron ion transport [goid 0006827]	Ferrichrome-binding periplasmic protein	Ferrichrome-binding periplasmic protein	
ECOLI00147	Ferrichrome transport system permease protein fhuB	ABC transporter, membrane spanning protein	Ferrichrome transport protein FhuB	Ferrichrome transport system permease protein fhuB	Ferrichrome transport system permease protein	Hydroxamate-dependent iron uptake, cytoplasmic membrane component	Iron (III) dicitrate transport system	ABC-type Fe3+-siderophore transport system, permease component	Residues 1 to 660 of 660 are 99 pct identical to residues 1 to 660 of a 660 aa protein from Escherichia coli K12 ref: NP_414695.1 hydroxamate-dependent iron uptake, cytoplasmic membrane component	Ferrichrome transport system permease protein FhuB	Ferrichrome-iron ABC transporter	Fe3+-siderophore ABC transporter permease	IPR000522: FecCD transport family; IPR006311: Twin-arginine translocation pathway signal ABC superfamily (membrane), hydroxamate-dependent iron uptake	similar to Salmonella typhi CT18 ferrichrome transport protein FhuB precursor ferrichrome transport protein FhuB precursor	ABC type hydroxamate-dependent iron uptake, with duplicated permease domains	ferrichrome transport system permease protein FhuB	ABC-type cobalamin/Fe3+-siderophores transport systems, permease components BtuC protein	Iron(3+)-hydroxamate import system permease protein fhuB	Code: P; COG: COG0609 hydroxamate-dependent iron uptake, cytoplasmic membrane component	ABC Fe+3 hydroxamate (ferrichrome) transporter, fused inner membrane subunits	Code: P; COG: COG0609 hydroxamate-dependent iron uptake, cytoplasmic membrane component	transport system permease protein	transport system permease protein	ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit	Code: P; COG: COG0609 hydroxamate-dependent iron uptake, cytoplasmic membrane component	transmembrane siderophore receptor similarity:fasta; SWALL:Q9S6S8 (EMBL:AJ007906); Rhizobium leguminosarum; FhuB; fhuB; length 634 aa; 631 aa overlap; query 23-653 aa; subject 1-631 aa similarity:fasta; SWALL:O86463 (EMBL:AJ007906); Rhizobium leguminosarum; FhuB; fhuB; length 657 aa; 653 aa overlap; query 1-653 aa; subject 2-654 aa	ferrichrome-iron ABC transporter, permease protein Similar to FhuB [Rhizobium leguminosarum] Similar to entrez-protein:CAA07726.1 Putative location:bacterial inner membrane Psort-Score: 0.5161; go_component: membrane [goid 0016020]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810]	Ferrichrome transport system permease protein FhuB	Ferrichrome transport system permease protein FhuB	
ECOLI00148	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Probable glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	similar to GB:X60702, GB:S62653, GB:D16105, SP:P29376,  and PID:440855; identified by sequence similarity; putative glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	hypothetical glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	Glutamate-1-semialdehyde 2,1-aminomutase	
ECOLI00149	H(+)/Cl(-) exchange transporter clcA	Sll0855 protein	Chloride channel protein EriC	Voltage-gated chloride channel protein	Probable voltage gated channel protein	Putative chloride channel	EriC voltage gated chloride channel	Putative chloride channel	Voltage-gated chloride channel family protein	H(+)/Cl(-) exchange transporter clcA	H(+)/Cl(-) exchange transporter clcA	Voltage-gated chloride channel protein	putative chloride channel protein EriC	H(+)/Cl(-) exchange transporter clcA	Voltage-gated chloride channel family protein	H(+)/Cl(-) exchange transporter clcA	PMID: 9389475 best DB hits: BLAST: gb:AAB89832.1; (AE001006) chloride channel, putative; E=3e-82 embl:CAC12582.1; (AL445067) chloride channel (CLC-3) related; E=2e-49 pir:B70617; hypothetical protein Rv0143c - Mycobacterium; E=1e-33 COG: AF1415_1; COG0038 Chloride channel protein EriC; E=7e-68 aq_438_2; COG0517 CBS domains; E=6e-09 sll0855; COG0038 Chloride channel protein EriC; E=1e-08 PFAM: PF00654; Voltage gated chloride channe; E=1.8e-62 PF00571; CBS domain; E=1.7e-06 putative chloride channel	Chloride channel protein	Putative uncharacterized protein	H(+)/Cl(-) exchange transporter clcA	H(+)/Cl(-) exchange transporter clcA	Voltage-gated chloride channel	Putative uncharacterized protein	H(+)/Cl(-) exchange transporter clcA	Residues 1 to 473 of 473 are 99 pct identical to residues 1 to 473 of a 473 aa protein from Escherichia coli K12 ref: NP_414697.1 putative channel transporter	H(+)/Cl(-) exchange transporter clcA	Voltage-gated chloride channel protein	similar to Voltage-gated ClC-type chloride channel hypothetical protein	conserved gene chloride channel protein EriC (voltage gated)	
ECOLI00150	Iron-sulfur cluster insertion protein erpA	HesB protein	Iron-sulfur cluster insertion protein erpA	HesB family protein	Iron-sulfur cluster insertion protein erpA	Iron-sulfur cluster insertion protein erpA	Putative uncharacterized protein	Protein aq_1857	HesB/YadR/YfhF family protein	HesB protein	Putative iron-sulfur cluster insertion protein erpA	Iron-sulfur cluster insertion protein erpA	Iron-sulfur cluster insertion protein erpA	HesB family protein	HesB/YadR/YfhF family protein	HesB protein	Putative uncharacterized protein	Iron-sulfur cluster insertion protein erpA	HesB/yadR/yfhF family protein	Uncharacterized ACR	Putative uncharacterized protein ML0871	HESB protein	Putative uncharacterized protein	Putative iron-sulfur cluster insertion protein erpA	HesB/YadR/YfhF family protein	putative HesB family protein	Scaffold protein for iron-sulfur cluster assembly	Hypothetical protein yadR	
ECOLI00151	UPF0126 inner membrane protein yadS	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Vng0298h	Putative yadS-like transmembrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	YghA protein	Predicted membrane protein	UPF0126 membrane protein DR_2368	Transporter	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	putative membrane protein	UPF0126 inner membrane protein yadS	identified by match to protein family HMM PF03458 membrane protein, putative	similar to GP:15155036; identified by sequence similarity; putative conserved hypothetical protein	Membrane protein, putative	UPF0126 membrane protein VC_2382	Putative uncharacterized protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSMEMBRANE PROTEIN	
ECOLI00152	Vitamin B12-binding protein	ABC transporter, periplasmic substrate-binding protein	Putative uncharacterized protein	Putative haemin uptake system periplasmic haemin- binding protein	Vitamin B12-binding protein precursor	Metal binding protein, putative	Iron(III) dicitrate-binding protein	Vitamin B12-binding protein	Lipoprotein	Putaive vitamin B12 transport protein	conserved hypothetical protein	Vitamin B12-binding protein precursor	Vitamin B12-binding protein	Periplasmic binding protein	Periplasmic binding protein	ABC transporter, periplasmic substrate-binding protein, putative	Vitamin B12-binding protein	Periplasmic binding protein	Vitamin B12 transport protein BtuF, putative	Vitamin B12-binding protein	Vitamin B12-binding protein	ABC-type Fe3+-siderophores transport systems, periplasmic components	Vitamin B12-binding protein	Residues 1 to 266 of 266 are 99 pct identical to residues 1 to 266 of a 266 aa protein from Escherichia coli K12 ref: NP_414700.1 orf, conserved hypothetical protein	Vitamin B12-binding protein	Similar to iron-binding protein	Probable abc-type transporter, periplasmic component abc transporter protein	Vitamin B12-binding protein	identified by match to protein family HMM PF01497 iron compound ABC transporter, iron compound-binding protein, putative	
ECOLI00153	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	Possible MTA/SAH nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nuclosidase	MTA/SAH nucleosidase	Phosphorylase family protein	5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	MTA/SAH nucleosidase	Nucleoside phosphorylase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	putative MTA/SAH nucleosidase	5'-methylthioadenosine nucleosidase , S- adenosylhomocysteine nucleosidase	MTA/SAH nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704 MTA/SAH nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase	MTA/SAH nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	5-methylthioadenosine nucleosidase	
ECOLI00154	Deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase- like protein	Deoxyguanosinetriphosphate triphosphohydrolase- like protein	Probable deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase- like protein	hypothetical deoxyguanosinetriphosphatetriphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase- like protein	Deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase- like protein	Residues 1 to 461 of 461 are 99 pct identical to residues 1 to 461 of a 505 aa protein from Escherichia coli K12 ref: NP_414702.1 deoxyguanosine triphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark deoxyguanosinetriphosphate triphosphohydrolase	deoxyguanosine triphosphate triphosphohydrolase	similar to Salmonella typhi CT18 deoxyguanosinetriphosphate triphosphohydrolase deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase	identified by similarity to SP:P15723; match to protein family HMM PF01966; match to protein family HMM TIGR01353 deoxyguanosinetriphosphate triphosphohydrolase	dGTP triphosphohydrolase Dgt protein	Deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2157212, 2165018, 2826481; Product type e : enzyme Deoxyguanosinetriphosphate triphosphohydrolase (dGTPase) (dGTP triphosphohydrolase)	Code: F; COG: COG0232 deoxyguanosine triphosphate triphosphohydrolase	deoxyguanosine triphosphate triphosphohydrolase	Deoxyguanosinetriphosphate triphosphohydrolase	Putative deoxyguanosinetriphosphate triphosphohydrolase	
ECOLI00155	Protease do	Heat shock protein	Serine protease	Protease DO; heat shock protein HtrA	DegQ protease	putative DegQ serine protease	Periplasmic serine protease DO	Protease do	Serine protease, HtrA/DegQ/DegS family	Protease Do	PMID: 10684935 best DB hits: BLAST: swissprot:P18584; DEGP_CHLTR PROBABLE SERINE PROTEASE DO-LIKE; E=1e-63 pir:B81728; serine proteinase, HtrADegQ/DegS family TC0210; E=3e-63 embl:CAA72164.1; (Y11304) ORF E0 [Rhodobacter capsulatus]; E=5e-62 COG: CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=1e-64 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=5e-63 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=3e-57 PFAM: PF02874; ATP synthase alpha/beta family,; E=0.027 PF00089; Trypsin; E=9.8e-30 PF00595; PDZ domain (Also known as DHR o; E=1e-10 probable serine protease do-like DEGP	Probable serine protease do-like	PROTEASE DO	serine proteinase	serine protease Do	Protease do	Probable serine protease do-like	Residues 1 to 474 of 474 are 99 pct identical to residues 1 to 474 of a 474 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285857.1 periplasmic serine protease Do; heat shock protein HtrA	Global stress requirement protein GsrA	Heat shock protein	identified by similarity to SP:P09376; match to protein family HMM PF00089; match to protein family HMM PF00595 protease DO	Serine protease do-like htrA	IPR001478: PDZ/DHR/GLGF domain; IPR001940: Peptidase S1C, HtrA/DegQ protease periplasmic serine protease Do, heat shock protein	similar to Salmonella typhi CT18 protease DO precursor; heat shock protein HtrA protease DO precursor; heat shock protein HtrA	Putative uncharacterized protein gbs2133	identified by match to PFAM protein family HMM PF00089 serine protease	Periplasmic serine protease Do, heat shock protein	Periplasmic serine protease DO	Similar to sp|Q92JA1|DEGP_RICCN sp|O05942|DEGP_RICPR; Ortholog to ERGA_CDS_08430 Probable serine protease do-like precursor	
ECOLI00156	Carbohydrate diacid regulator	Putative uncharacterized protein CPE0859	Putative uncharacterized protein	Putative uncharacterized protein STY0232	Putative transcriptional regulator	Carbohydrate diacid regulator	Putative uncharacterized protein VCA0905	Putative uncharacterized protein	Carbohydrate diacid regulator	Putative uncharacterized protein	Carbohydrate diacid regulator, putative	Putative uncharacterized protein VPA0115	Putative uncharacterized protein yaeG	CDS_ID OB2784 hypothetical protein	Uncharacterized conserved protein, YAEG family	Regulator of polyketide synthase expression	Putative sugar diacid recognition	carbohydrate diacid regulator	putative inner membrane protein	similar to Salmonella typhi Ty2 conserved hypothetical protein conserved hypothetical protein	Sugar diacide regulator	carbohydrate diacid regulator	Regulator of polyketide synthase expression SrmR protein	Putative uncharacterized protein	Putative inner membrane protein	sugar diacide regulator	identified by match to protein family HMM PF05651 Putative sugar diacid recognition family	Putative sugar diacid recognition	Code: KT; COG: COG3835 conserved hypothetical protein	
ECOLI00157	UPF0325 protein yaeH	UPF0325 protein yaeH	conserved hypothetical protein	UPF0325 protein yaeH	UPF0325 protein VC_2264	UPF0325 protein ECA1027	UPF0325 protein VP2321	UPF0325 protein yaeH	UPF0325 protein VV1_1856	Residues 1 to 128 of 128 are 100 pct identical to residues 1 to 128 of a 128 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285859.1 putative structural protein	UPF0325 protein YPO1040/y3141/YP_2811	UPF0325 protein plu0668	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0325 protein YPTB3007	putative structural protein	UPF0325 protein yaeH	putative structural protein	putative structural protein	conserved hypothetical protein	Chromosome segregation ATPase COG1196	putative structural protein	UPF0325 protein yaeH	Hypothetical protein	UPF0325 protein yaeH	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Hypothetical protein	
ECOLI00158	Phosphodiesterase yaeI	identified by match to PFAM protein family HMM PF02549 hypothetical protein	Uncharacterized metallophosphoesterase DR_2345	Uncharacterized metallophosphoesterase CPn_0578/CP_0170/CPj0578/CpB0602	Phosphoesterase	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	CDS_ID OB1398 hypothetical protein	Putative uncharacterized protein ykuE	Predicted phosphohydrolase	Putative uncharacterized protein	Uncharacterized metallophosphoesterase CT_461	phosphoesterase	Putative uncharacterized protein yqeD	Similar to Chlamydia pneumoniae hypothetical protein cpn0578/cp0170/cpj0578 precursor cpn0578 or cp0170 or cpj0578 SWALL:Y578_CHLPN (SWALL:Q9Z7X6) (320 aa) fasta scores: E(): 6.5e-86, 62.92% id in 321 aa putative exported protein	Evidence 5 : No homology to any previously reported sequences hypothetical protein; putative membrane protein	Ser/Thr protein phosphatase family protein	conserved hypothetical protein	Code: R; COG: COG1408 conserved hypothetical protein	Predicted phosphohydrolases	Code: R; COG: COG1408 conserved hypothetical protein	Metallophosphoesterase	putative membrane-associated phosphoesterase	metallophosphoesterase	predicted phosphohydrolase COG1408	Twin-arginine translocation pathway signal TIGRFAM: Twin-arginine translocation pathway signal: (0.082) PFAM: metallophosphoesterase: (1.4e-18) KEGG: dra:DR2345 hypothetical protein, ev=1e-89, 59% identity	phosphohydrolase	hypothetical protein similarity to COG1408 Predicted phosphohydrolases(Evalue: 8E-27)	
ECOLI00159	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2-carboxylate N-succin	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	DapD protein	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	23,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase	identified by match to PFAM protein family HMM PF00132 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE 2,3,4,5-TETRAHYDROPYRIDINE-2-CARBOXYLATE N-SUCCINYLTRANSFERASE PROTEIN	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	PUTATIVE 2	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (EC2.3.1.117)	
ECOLI00160	[Protein-PII] uridylyltransferase	Protein-P-II uridylyltransferase, putative	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	Putative uncharacterized protein glnD	Protein-pII; uridylyltransferase	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	Uridylyltransferase	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	Probable [Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	putative protein-P-II uridylyltransferase	Protein-P-II uridylyltransferase	[Protein-PII] uridylyltransferase	similar to GB:M27903, GB:M24779, GB:M34228, GB:M16750, GB:M54915, SP:P11309, PID:1066791, PID:189957, PID:189962, and PID:387022; identified by sequence similarity; putative [protein-pII] uridylyltransferase, putative	Protein-P-II uridylyltransferase, putative	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	[Protein-PII] uridylyltransferase	PMID: 11065377 PMID: 8412694 best DB hits: BLAST: gb:AAF17352.1; AF155830_1 (AF155830) putative; E=1e-62 swissprot:Q9RAE4; GLND_RHILV [PROTEIN-PII] URIDYLYLTRANSFERASE; E=1e-62 swissprot:Q9KPV0; GLND_VIBCH [PROTEIN-PII] URIDYLYLTRANSFERASE; E=1e-61 COG: VC2262; COG2844 UTP:GlnB (protein PII) uridylyltransferase; E=9e-63 PFAM: PF01966; HD domain; E=0.48 PF01842; ACT domain; E=0.0017 uridylyltransferase/uridylyl-removing enzyme glnD	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PROTEIN-PII URIDYLYLTRANSFERASE	[Protein-PII] uridylyltransferase	
ECOLI00161	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	identified by match to TIGR protein family HMM TIGR01477 methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	hypothetical methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	Methionine aminopeptidase	
ECOLI00162	30S ribosomal protein S2	40S ribosomal protein mrp4, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC24C9.10c]	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	identified by match to PFAM protein family HMM PF03033 ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	
ECOLI00162	30S ribosomal protein S2	40S ribosomal protein mrp4, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC24C9.10c]	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	identified by match to PFAM protein family HMM PF03033 ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	30S ribosomal protein S2	
ECOLI00163	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	identified by match to PFAM protein family HMM PF03662 translation elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	Elongation factor Ts	
ECOLI00164	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	identified by match to PFAM protein family HMM PF03575 uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	Uridylate kinase	
ECOLI00165	Ribosome-recycling factor	Ribosome-recycling factor	some similarities with sp|P38771 Saccharomyces cerevisiae YHR038w FIL1 Killed in Mutagen, sensitive to Diepoxybutane and/or Mitomycin C singleton, hypothetical start	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	similar to uniprot|P38771 Saccharomyces cerevisiae YHR038w FIL1;	DEHA2F14630p;weakly similar to uniprot|P38771 Saccharomyces cerevisiae YHR038W RRF1 Ribosomal Recycling Factor 1;	identified by match to TIGR protein family HMM TIGR00496 ribosome recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	Ribosome-recycling factor	
ECOLI00166	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	similar to GB:X70683, GB:X65661, GB:Z64667, SP:Q06945, PID:36553,  and PID:938230; identified by sequence similarity; putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase	
ECOLI00167	Undecaprenyl pyrophosphate synthetase	Uncharacterized protein C4D7.04c [Source:GeneDB_Spombe;Acc:SPAC4D7.04c]	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	identified by match to TIGR protein family HMM TIGR00055 undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase 2	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	Undecaprenyl pyrophosphate synthetase	
ECOLI00168	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	similar to GB:J00179, GB:M32724, GB:M91036, GB:M91037, GB:V00513, GB:V00514, GB:V00517, GB:J00176, GB:M32249, GB:M33200, GB:X00672, GB:X55655, GB:M23864, GB:X00424, GB:M15386, GB:U01317, GB:X55656, GB:V00512, SP:P02096, PID:182962, PID:182963, PID:182965, PID:182966, PID:183239, PID:183832, PID:183851, PID:183872, PID:183885, PID:31640, PID:31727, PID:31729, PID:31731, PID:31733, PID:31760, PID:31761, PID:455994,  and PID:455995; identified by sequence similarity; putative phosphatidate cytidylyltransferase, putative	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	putative phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	identified by match to protein family HMM PF01148 phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PHOSPHATIDATE CYTIDYLYLTRANSFERASE TRANSMEMBRANE PROTEIN	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	
ECOLI00168	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	similar to GB:J00179, GB:M32724, GB:M91036, GB:M91037, GB:V00513, GB:V00514, GB:V00517, GB:J00176, GB:M32249, GB:M33200, GB:X00672, GB:X55655, GB:M23864, GB:X00424, GB:M15386, GB:U01317, GB:X55656, GB:V00512, SP:P02096, PID:182962, PID:182963, PID:182965, PID:182966, PID:183239, PID:183832, PID:183851, PID:183872, PID:183885, PID:31640, PID:31727, PID:31729, PID:31731, PID:31733, PID:31760, PID:31761, PID:455994,  and PID:455995; identified by sequence similarity; putative phosphatidate cytidylyltransferase, putative	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	putative phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	identified by match to protein family HMM PF01148 phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PHOSPHATIDATE CYTIDYLYLTRANSFERASE TRANSMEMBRANE PROTEIN	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	
ECOLI00169	Regulator of sigma E protease	Putative zinc metalloprotease FN1322	Membrane-associated zinc metalloprotease, putative	Putative zinc metalloprotease PD_0327	Putative zinc metalloprotease slr1821	Putative uncharacterized protein	Putative zinc metalloprotease HI0918	Membrane-associated zinc metalloprotease	Membrane-associated zinc metalloprotease, putative	Putative zinc metalloprotease aq_1964	Putative uncharacterized protein	Putative uncharacterized protein	Probable protease eep	Metalloprotease mmpA	Putative zinc metalloprotease RC0203	Putative zinc metalloprotease NMB0183	Putative zinc metalloprotease PM1991	Putative zinc metalloprotease PA3649	Putative zinc metalloprotease TM_0890	Predicted membrane-associated Zn-dependent protease 1	Putative zinc metalloprotease DR_1507	Putative zinc metalloprotease Atu1380	Regulator of sigma E protease	Putative zinc metalloprotease all3971	Putative membrane-associated zinc metalloprotease	Hypothetical membrane protein	Putative zinc metalloprotease Lmo1318	Predicted membrane-associated Zn-dependent proteases 1	Putative zinc metalloprotease ML1582	
ECOLI00170	Outer membrane protein assembly factor yaeT	Outer membrane protein	Outer membrane protein, putative	Outer membrane antigen	Protective surface antigen D15	similar to GB:X75201,  and PID:435005; identified by sequence similarity; putative outer membrane protein, putative	Bacterial surface antigen family protein	Outer membrane protein	Outer membrane protein omp1	Outer membrane protein omp85	Putative uncharacterized protein	Outer membrane protein	Outer membrane surface antigen protein	Outer membrane protein	Outer membrane protein	Group 1 outer membrane protein	Outer membrane protein assembly factor yaeT	Related to outer membrane protein	Putative outer membrane protein	Surface antigen	putative surface antigen	Omp85 Analog	Putative uncharacterized protein	Outer membrane protein assembly factor yaeT precursor	similar to GB:U01215, SP:P16535, GB:M24197, PID:397992, and SP:P55118; identified by sequence similarity; putative bacterial surface antigen	Outer membrane protein, putative	Outer membrane protein, OMP85 family	Surface antigen	Outer membrane protein Omp1	
ECOLI00171	Chaperone protein skp	Outer membrane p25	Outer membrane protein	Chaperone protein skp	Putative outer membrane protein	putative outer membrane protein OmpH	Chaperone protein skp precursor	Chaperone protein skp	Putative outer membrane protein	Putative outer membrane protein	Outer membrane protein OmpH	Chaperone protein skp	Putative outer membrane protein	Outer membrane protein, OmpH/HlpA family	Outer membrane protein OmpH	Chaperone protein skp	Outer membrane protein	Outer membrane protein	Residues 1 to 161 of 161 are 99 pct identical to residues 1 to 161 of a 161 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285872.1 histone-like protein, located in outer membrane or nucleoid	Chaperone protein skp	Putative transmembrane protein	HlpA protein	Probable outer membrane chaperone, skp-related transmembrane protein	Chaperone protein skp	similar to putative outer membrane proteins hypothetical protein	conserved gene outer membrane protein OmpH	similar to putative outer membrane proteins hypothetical protein	Outer membrane protein	Chaperone protein skp	
ECOLI00172	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	putative UDP-3-O- glucosamine N-acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase	
ECOLI00173	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	identified by match to PFAM protein family HMM PF03061 (3R)-hydroxymyristol-(acyl carrier protein) dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase 2	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase	
ECOLI00174	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-(Acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	similar to GB:X63657, SP:Q06136,  and PID:296186; identified by sequence similarity; putative acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine o-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	UDP-N-acetylglucosamine acyltransferase	UDP-N-acetylglucosamine acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine o-acyltransferase	Probable acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	putative Acyl-UDP-N-acetylglucosamine O-acyltransferase	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	Acyl-UDP-N-acetylglucosamineO-acyltransferase	
ECOLI00175	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase, putative	Lipid-A-disaccharide synthetase	Lipid-A-disaccharide synthetase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid A-disaccharide synthase	Lipid-A-disaccharide synthase	Lipid A disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	putative lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	similar to SP:P10441; identified by sequence similarity; putative lipid A disaccharide synthase	Lipid A disaccharide synthase	Lipid-A-disaccharide synthase	Lipid-A-disaccharide synthase	
ECOLI00176	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	identified by match to PFAM protein family HMM PF03826 ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	hypothetical ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	Ribonuclease HII	
ECOLI00177	DNA polymerase III subunit alpha	DNA polymerase III alpha subunit	DNA polymerase III, alpha subunit	DNA polymerase III subunit alpha	DNA polymerase III subunit alpha	DNA polymerase III alpha chain	DNA polymerase III subunit alpha	identified by match to PFAM protein family HMM PF04301 DNA polymerase III, alpha subunit	DNA polymerase III alpha subunit	DNA polymerase III, alpha subunit	Putative DNA polymerase III alpha subunit	DNA polymerase III alpha subunit	DNA polymerase III subunit alpha	DNA polymerase III, alpha subunit	DNA polymerase III, alpha subunit	DNA polymerase III, subunit alpha	DNA polymerase III, alpha subunit	DNA polymerase III subunit alpha	DNA polymerase III subunit alpha	DNA polymerase III subunit alpha	DNA polymerase III subunit alpha	DNA polymerase III subunit alpha	DNA polymerase III subunit alpha	DNA polymerase III, alpha subunit	DNA polymerase III subunit alpha	DNA polymerase III, subunit alpha	DNA polymerase III, alpha chain	DNA polymerase III, alpha chain	DNA polymerase III alpha subunit	
ECOLI00178	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	identified by match to PFAM protein family HMM PF03255 acetyl-coenzyme A carboxylase carboxyl transferase, alpha subunit	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	
ECOLI00179	Lysine decarboxylase, constitutive	Lysine decarboxylase	Lysine decarboxylase, constitutive	lysine decarboxylase	Lysine decarboxylase 2, constitutive	CDS_ID OB0035 lysine decarboxylase	Residues 1 to 713 of 713 are 99 pct identical to residues 1 to 713 of a 713 aa protein from Escherichia coli K12 ref: NP_414728.1 lysine decarboxylase 2, constitutive	lysine decarboxylase	IPR000310: Orn/Lys/Arg decarboxylase, major region lysine decarboxylase 2, constitutive	similar to Salmonella typhi CT18 lysine decarboxylase lysine decarboxylase	Lysine decarboxylase 2, constitutive	Code: E; COG: COG1982 lysine decarboxylase 2, constitutive	lysine decarboxylase	Lysine decarboxylase precursor	Lysine decarboxylase, constitutive	Lysine decarboxylase	Lysine decarboxylase, constitutive	Lysine decarboxylase PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein KEGG: bcn:Bcen_1821 lysine decarboxylase	Lysine decarboxylase, constitutive	Probable Orn/Arg/Lys decarboxylase	putative arginine/lysine/ornithine decarboxylase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	lysine decarboxylase 2, constitutive Code: E; COG: COG1982	Orn/Lys/Arg decarboxylase, major region	lysine decarboxylase, constitutive	Lysine decarboxylase	Ornithine decarboxylase	L-lysine decarboxylase	Lysine decarboxylase	Lysine decarboxylase 2, constitutive	
ECOLI00180	Uncharacterized protein yaeR	Putative uncharacterized protein CPE0451	Glyoxylase family protein	Putative uncharacterized protein	Lactoylglutathione lyase	Putative uncharacterized protein STY0260	Alr4469 protein	Glyoxylase family protein	Lactoylglutathione lyase	Lactoylglutathione lyase	putative glyoxylase I family protein	Hypothetical protein yaeR	identified by match to protein family HMM PF00903 glyoxylase family protein	Glyoxylase I family protein	Glyoxalase family protein	Putative uncharacterized protein	hypothetical conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Glyoxylase I family protein	Putative uncharacterized protein yaeR	hypothetical protein	Glyoxalase I	Lactoylglutathione lyase	Residues 1 to 138 of 138 are 99 pct identical to residues 1 to 138 of a 138 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285881.1 orf, conserved hypothetical protein	Lactoylglutathione lyase and related lyases	Lactoylglutathione lyase	Probable glyoxylase I family protein	conserved hypothetical protein	
ECOLI00181	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	hypothetical cell cycle protein MesJ	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	hypothetical conserved protein	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	tRNA(Ile)-lysidine synthase	
ECOLI00182	Protein rof	ROF protein	Rof protein	Modulator of rho-dependent transcription termination	Putative uncharacterized protein yaeO	Residues 1 to 86 of 86 are 100 pct identical to residues 1 to 86 of a 86 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285883.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Rof protein	modulator of Rho-dependent transcription termination	similar to Salmonella typhi CT18 ROF protein ROF protein	Putative uncharacterized protein	Modulator of Rho-dependent transcription termination	Code: K; COG: COG4568 conserved hypothetical protein	Code: K; COG: COG4568 conserved hypothetical protein	conserved hypothetical protein	Transcriptional antiterminator, Rof	Code: K; COG: COG4568; orf conserved hypothetical protein	Rho-dependent transcription termination	Hypothetical protein	Rho-binding antiterminator protein	Hypothetical protein	Hypothetical protein	hypothetical protein	conserved hypothetical protein Code: K; COG: COG4568	Hypothetical protein	Rho-binding antiterminator protein	transcriptional antiterminator, Rof KEGG: pfo:Pfl_3287 transcriptional antiterminator, Rof	Transcriptional antiterminator, Rof	Transcriptional antiterminator, Rof	
ECOLI00183	UPF0253 protein yaeP	UPF0253 protein yaeP	conserved hypothetical protein	UPF0253 protein yaeP	UPF0253 protein VC_0872	UPF0253 protein VP2335	UPF0253 protein yaeP	UPF0253 protein VV1_1836	Residues 1 to 72 of 72 are 93 pct identical to residues 1 to 72 of a 72 aa protein from Salmonella typhimurium LT2 ref: NP_459243.1 putative cytoplasmic protein	UPF0253 protein YPO1064.1/y3113/YP_2785	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0253 protein YPTB2982	conserved hypothetical protein	UPF0253 protein yaeP	putative cytoplasmic protein	putative cytoplasmic protein	putative cytoplasmic protein	UPF0253 protein yaeP	Hypothetical protein	UPF0253 protein yaeP	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Hypothetical protein	putative cytoplasmic protein	Hypothetical protein	conserved hypothetical protein KEGG: vfi:VF0662 hypothetical protein	UPF0253 protein Ent638_0728	
ECOLI00184	Uncharacterized protein yaeQ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VVA1068	Uncharacterized protein yaeQ	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein yaeQ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VPA0551	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Residues 1 to 181 of 181 are 100 pct identical to residues 1 to 181 of a 181 aa protein from Escherichia coli K12 ref: NP_414732.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00185	Uncharacterized protein yaeJ	Peptidyl-tRNA hydrolase domain protein	Slr5115 protein	Peptidyl-tRNA hydrolase	Prokaryotic and mitochondrial release factors family protein	Putative uncharacterized protein	Putative uncharacterized protein	Class I peptide chain release factor	Peptidyl-tRNA hydrolase	Putative uncharacterized protein	Putative uncharacterized protein	Putative release factor	Alr4696 protein	Putative uncharacterized protein	Putative release factor	conserved hypothetical protein	Peptidyl-tRNA hydrolase	Hypothetical protein yaeJ	identified by match to TIGR protein family HMM TIGR00020 peptidyl-tRNA hydrolase domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Prokaryotic and mitochondrial release factors family protein	PMID: 2215213 best DB hits: BLAST: swissprot:P45388; YAEJ_PSEPU HYPOTHETICAL 15.2 KD PROTEIN IN PCAJ; E=3e-16 embl:CAA63804.1; (X93605) hypothetical protein YAEJ [Zymomonas; E=7e-15 pir:A83538; conserved hypothetical protein PA0868 [imported] -; E=4e-12 COG: PA0868; COG1186 Protein chain release factor B; E=4e-13 sll1110; COG0216 Protein chain release factor A; E=0.010 PFAM: PF00472; Peptidyl-tRNA hydrolase domain; E=2.2e-09 conserved hypothetical protein-putative protein chain release factor B	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Peptidyl-tRNA hydrolase domain protein	Putative uncharacterized protein	hypothetical protein	Peptidyl-tRNA hydrolase, putative	Peptidyl-tRNA hydrolase domain	
ECOLI00186	Lipoprotein nlpE	Copper homeostasis protein cutF	Copper homeostasis lipoprotein	Copper homeostasis protein	Residues 1 to 236 of 236 are 98 pct identical to residues 1 to 236 of a 236 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285886.1 copper homeostasis protein (lipoprotein)	Putative copper homeostasis lipoprotein	Copper homeostasis protein CutF	similar to Salmonella typhi Ty2 copper homeostasis protein CutF precursor copper homeostasis protein CutF precursor	Putative copper homeostasis lipoprotein	lipoprotein; Code: MP; COG: COG3015 copper homeostasis protein	Code: MP; COG: COG3015 copper homeostasis protein (lipoprotein)	lipoprotein; Code: MP; COG: COG3015 copper homeostasis protein	Copper homeostasis protein CutF	Putative copper homeostasis lipoprotein precursor	Copper homeostasis protein CutF	Copper homeostasis lipoprotein precursor	Putative copper homeostasis lipoprotein precursor	copper homeostasis protein (lipoprotein) Code: MP; COG: COG3015	Copper homeostasis lipoprotein precursor	copper homeostasis protein CutF precursor	Copper resistance lipoprotein NlpE precursor	Copper homeostasis protein	Putative uncharacterized protein	Copper homeostasis protein CutF	Copper resistance lipoprotein NlpE precursor	Lipoprotein involved with copper homeostasis and adhesion	Copper homeostasis protein CutF	Copper homeostasis protein CutF	Copper resistance lipoprotein NlpE precursor	
ECOLI00187	Uncharacterized lipoprotein yaeF	Putative uncharacterized protein yaeF	Residues 1 to 277 of 277 are 98 pct identical to residues 16 to 292 of a 292 aa protein from Escherichia coli K12 ref: NP_414735.1 orf, conserved hypothetical protein	Putative lipoprotein	Putative lipoprotein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative lipoprotein	Putative synthase of the YaeF/YiiX family	Lipoprotein	conserved hypothetical protein	Lipoprotein	putative synthase of the YaeF/YiiX family	Putative synthase	Predicted lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	
ECOLI00188	Prolyl-tRNA synthetase	conserved hypothetical protein;	Protein with similarity to tRNA synthetases; non- tagged protein is detected in purified mitochondria; null mutant is viable and displays elevated frequency of mitochondrial genome loss. [Source:SGD;Acc:S000000889]	similar to sp|P78600 Candida albicans Prolyl-tRNA synthetase, cytoplasmic, start by similarity	Prolyl-tRNA synthetase	Probable prolyl-tRNA synthetase, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC24C6.03]	similar to sp|P39965 Saccharomyces cerevisiae YER087w singleton, start by similarity	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	similar to uniprot|P39965 Saccharomyces cerevisiae YER087w;	DEHA2A07678p;similar to uniprot|P39965 Saccharomyces cerevisiae YER087W Probable Prolyl-tRNA synthetase;	identified by match to PFAM protein family HMM PF03129 prolyl-tRNA synthetase	Prolyl-tRNA synthetase 1	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	Prolyl-tRNA synthetase	
ECOLI00189	UPF0066 protein yaeB	UPF0066 protein HI0510	Putative uncharacterized protein	Putative uncharacterized protein	UPF0066 protein rcsF	Putative uncharacterized protein VV2571	Putative uncharacterized protein STY0270	Putative uncharacterized protein	conserved hypothetical protein	Hypothetical protein yaeB	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2332	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 235 of 235 are 99 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli K12 ref: NP_414737.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YaeB	Putative uncharacterized protein	IPR001378: Protein of unknown function, UPF0066 paral putative regulator	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	putative transcriptional regulator	Similar to: HI0510, YAEB_HAEIN conserved hypothetical protein	
ECOLI00190	Protein rcsF	Protein rcsF	Stimulator of colanic acid capsule synthesis	Regulator in colanic acid synthesis; interacts with RcsB	Residues 1 to 134 of 134 are 99 pct identical to residues 1 to 134 of a 134 aa protein from Escherichia coli K12 ref: NP_414738.1 regulator in colanic acid synthesis; interacts with RcsB	Putative lipoprotein	Exopolysaccharide synthesis regulatory protein RcsF	regulator in colanic acid synthesis; overexpression confers mucoid phenotype, increases capsule synthesis	similar to Salmonella typhi CT18 RcsF protein RcsF protein	Putative lipoprotein	RcsF	regulator in colanic acid synthesis; interacts with RcsB	interacts with RcsB regulator in colanic acid synthesis	putative lipoprotein	interacts with RcsB regulator in colanic acid synthesis	Protein RcsF	Putative lipoprotein precursor	Lipoprotein, putative precursor	Regulator of colanic acid synthesis	Lipoprotein precursor	Putative lipoprotein precursor	regulator in colanic acid synthesis	Lipoprotein precursor	putative outer membrane protein, signal	Regulator in colanic acid synthesis; overexpression confers mucoid phenotype, increases capsule synthesis precursor	Regulator in colanic acid synthesis; interacts with RcsB	Putative uncharacterized protein	Exopolysaccharide synthesis regulator RcsF	Putative lipoprotein precursor	
ECOLI00191	D-methionine-binding lipoprotein metQ	Probable D-methionine-binding lipoprotein metQ	ABC-type metal ion transport system, periplasmic component	D-methionine-binding lipoprotein metQ	Putative ABC transporter, substrate-binding protein	Putative lipoprotein	ABC transporter substrate-binding protein	ABC transporter, substrate-binding protein; probable NLPA lipoprotein	Putative exported protein	putative lipoprotein YaeC	D-methionine-binding lipoprotein metQ	identified by match to protein family HMM PF03180 ABC transporter, substrate-binding protein, putative	Lipoprotein, YaeC family	Probable D-methionine-binding lipoprotein metQ	Putative exported protein	Membrane lipoprotein TpN32	D-methionine-binding lipoprotein	D-methionine-binding lipoprotein MetQ	ABC-TRANSPORT PERIPLASMIC PROTEIN	Outer membrane protein	Putative lipoprotein	Putative lipoprotein	D-methionine ABC transporter, periplasmic D- methionine-binding protein	Outer membrane lipoprotein	Lipoprotein YaeC	D-methionine-binding lipoprotein metQ	CDS_ID OB3165 lipoprotein	Probable D-methionine-binding lipoprotein MetQ	Methionine-binding protein	
ECOLI00192	D-methionine transport system permease protein metI	ABC transporter, permease protein	Probable D-methionine transport system permease protein metI	ABC transporter, membrane spanning protein	D-methionine transport system permease protein metI	Lmo0283 protein	Putative ACB transport system, membrane protein	ABC transporter	D-methionine transport system permease protein metI	identified by match to TIGR protein family HMM TIGR01594 ABC transporter, permease protein	ABC transporter, permease protein	D-methionine transport system permease protein	ABC transporter permease protein	ABC transporter, permease protein	ABC TRANSPORTER PERMEASE PROTEIN	D-methionine transport system permease protein metI	CDS_ID OB3325 ABC transporter permease	Probable ABC transporter permease yaeE	Putative ABC transporter, permease protein	ABC transporter, permease component	Lin0311 protein	Residues 1 to 217 of 217 are 99 pct identical to residues 1 to 217 of a 217 aa protein from Escherichia coli K12 ref: NP_414740.1 putative transport system permease protein	D-methionine transport system permease protein metI	D-methionine transport permease protein MetI	Similar to ABC transporter permease protein hypothetical protein	conserved gene ATP binding protein, permease protein	Similar to ABC transporter permease protein hypothetical protein	ABC transporter permease protein	IPR000515: Binding-protein-dependent transport systems inner membrane component putative ABC superfamily (membrane) transport protein	
ECOLI00193	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN 1	Methionine import ATP-binding protein metN	ABC transporter, ATP-binding protein	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN 1	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN 1	Methionine import ATP-binding protein metN 1	putative ABC-type metal ion transportsystem, ATPase component	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN	identified by match to TIGR protein family HMM TIGR00972 ABC transporter, ATP-binding protein	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN	Amino acid ABC transporter, ATP-binding protein	Methionine import ATP-binding protein metN 3	Methionine import ATP-binding protein metN	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN 2	Methionine import ATP-binding protein metN	Methionine import ATP-binding protein metN	
ECOLI00194	D,D-heptose 1,7-bisphosphate phosphatase	D,D-heptose 1,7-bisphosphate phosphatase	Probable D,D-heptose 1,7-bisphosphate phosphatase	Putative phosphatase	D,D-heptose 1,7-bisphosphate phosphatase	Probable D,D-heptose 1,7-bisphosphate phosphatase	Possible phosphatase	D,D-heptose 1,7-bisphosphate phosphatase	D,D-heptose 1,7-bisphosphate phosphatase	Histidinol phosphatase	D,D-heptose 1,7-bisphosphate phosphatase	Histidinol-phosphatase	Histidinol-phosphatase; haloacid dehalogenase- like hydrolase	Putative D-glycero-d-manno-heptose 1,7- bisphosphate phosphatase	putative histidinol phosphatase-related protein	D,D-heptose 1,7-bisphosphate phosphatase	identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662 histidinol-phosphate phosphatase family protein	Hydrolase, HAD-superfamily, subfamily IIIA	D,D-heptose 1,7-bisphosphate phosphatase	Histidinol phosphatase domain protein	Putative uncharacterized protein	Putative uncharacterized protein	D,D-heptose 1,7-bisphosphate phosphatase	hypothetical protein	D,D-heptose 1,7-bisphosphate phosphatase	Histidinol phosphatase-related protein	D,D-heptose 1,7-bisphosphate phosphatase	CDS_ID OB1275 hypothetical protein	hypothetical protein	




ECOLI00196	Uncharacterized HTH-type transcriptional regulator yafC	Putative transcriptional regulator, LysR family	Hypothetical transcriptional regulator yafC	Probable LysR-family transcriptional regulator	Transcriptional regulator, LysR family	Putative transcriptional regulator LYSR-type	Residues 1 to 301 of 304 are 98 pct identical to residues 1 to 301 of a 304 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285896.1 putative transcriptional regulator LYSR-type	Similar to LysR-family transcriptional regulator	IPR000847: Bacterial regulatory protein LysR, HTH motif putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 hypothetical transcriptional regulator hypothetical transcriptional regulator	Putative lysR-family transcriptional regulator	Putative LysR family transcriptional regulator	Similar to Bacillus subtilis glutamate biosynthesis transcriptional regulatory protein GltC SW:GLTC_BACSU (P20668) (300 aa) fasta scores: E(): 1.3e-14, 29.900% id in 301 aa. N-terminus is similar to the N-terminal region of Acinetobacter calcoaceticus cat operon transcriptional regulator CatM SW:CATM_ACICA (P07774) (303 aa) fasta scores: E(): 5.1e-12, 30.364% id in 247 aa LysR family regulatory protein	Best Blastp Hit: pir||E81979 probable lysR-family transcription regulator NMA0601 [imported] - Neisseria meningitidis (group A strain Z2491) >gi|7379336|emb|CAB83891.1| (AL162753) putative lysR-family transcriptional regulator [Neisseria meningitidis] COG0583 Transcriptional regulators, LysR family putative LysR-family transcriptional regulator	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Transcriptional regulator, LysR family	Putative transcriptional regulator LYSR-type	putative HTH-type transcriptional regulator YafC identified by match to protein family HMM PF00126; match to protein family HMM PF03466	Putative LysR-family transcriptional regulatory protein	Transcriptional regulator, LysR-family	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	putative transcriptional regulator LYSR-type	Putative lysR-family transcriptional regulator	Putative LysR-family transcriptional regulator	Transcriptional regulator, LysR family	Putative transcriptional regulator	Putative uncharacterized protein	
ECOLI00195	2,5-diketo-D-gluconic acid reductase B	Probable oxidoreductase	2,5-diketo-D-gluconic acid reductase B	2,5-diketo-D-gluconic acid reductase B	Probable aldehyde reductase	Probable aldehyde reductase	Probable aldehyde reductase	2,5-diketo-D-gluconic acid reductase B	Residues 1 to 267 of 267 are 99 pct identical to residues 1 to 267 of a 267 aa protein from Escherichia coli K12 ref: NP_414743.1 putative aldose reductase	2,5-diketo-D-gluconic acid reductase B	Putative aldo/keto reductase; oxidoreductase protein	2,5-diketo-D-gluconic acid reductase B	Probable oxidoreductase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark oxidoreductase	IPR001395: Aldo/keto reductase 2,5-diketo-D-gluconate reductase B	similar to Salmonella typhi CT18 hypothetical oxidoreductase hypothetical oxidoreductase	Putative aldo/keto reductase	Evidence 2b : Function of strongly homologous gene; Product type e : enzyme aldehyde reductase	Oxidoreductase, aldo/keto reductase family	2,5-diketo-D-gluconic acid reductase B	oxidoreductase	identified by match to protein family HMM PF00248 oxidoreductase, aldo/keto reductase family	2,5-didehydrogluconate reductase	Code: R; COG: COG0656 putative aldose reductase	Code: R; COG: COG0656 putative aldose reductase	aldo/keto reductase	aldo/keto reductase	Aldo/keto reductase	2,5-didehydrogluconate reductase	
ECOLI00197	UPF0294 protein yafD	UPF0294 protein yafD	Alr4222 protein	Putative uncharacterized protein	hypothetical protein	UPF0294 protein yafD	UPF0294 protein VC_2238	Endonuclease/exonuclease/phosphatase family protein	hypothetical protein	UPF0294 protein VP2298	UPF0294 protein yafD	UPF0294 protein VV1_1880	Residues 1 to 266 of 266 are 99 pct identical to residues 1 to 266 of a 266 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285897.1 orf, conserved hypothetical protein	UPF0294 protein YPO1077/y3099/YP_2772	UPF0294 protein plu0699	Hypothetical protein yafD	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Uncharacterized BCR Hypothetical protein	UPF0294 protein yafD	Code: S; COG: COG3021 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3021 conserved hypothetical protein	Endonuclease/exonuclease/phosphatase	conserved hypothetical protein	Code: S; COG: COG3021; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	
ECOLI00198	Uncharacterized protein yafE	Putative uncharacterized protein	Putative methyltransferase	Methyltransferase, UbiE/COQ5 family	SAM-dependent methyltransferase	Methyltransferase	Putative biotin biosyntehsis related protein	Hypothetical protein yafE	identified by match to protein family HMM PF01209 methlytransferase, UbiE/COQ5 family	UbiE/COQ5 methyltransferase family protein	UbiE/COQ5 methyltransferase family protein	Putative methyltransferase	pseudo	Methlytransferase, UbiE/COQ5 family	Putative uncharacterized protein	CDS_ID OB1496 hypothetical protein	BH2331 protein	Residues 1 to 256 of 256 are 95 pct identical to residues 1 to 256 of a 256 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285898.1 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR000051: SAM (and some other nucleotide) binding motif; IPR001601: Generic methyltransferase putative methyltransferase in menaquinone/biotin biosynthesis	similar to Salmonella typhi CT18 putative methyltransferase putative methyltransferase	Putative methyltransferase in menaquinone/biotin biosynthesis	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative methyltransferase	Methlytransferase, UbiE/COQ5 family	Similar to Q8Z984 Putative methyltransferase from Salmonella typhi (256 aa). FASTA: opt: 707 Z-score: 818.1 E(): 1.1e-37 Smith-Waterman score: 707; 42.570 identity in 249 aa overlap. ORF ftt0677c conserved hypothetical protein	Putative methyltransferase in menaquinone/biotin biosynthesis	methyltransferase in menaquinone/biotin biosynthesis	methyltransferase	identified by match to protein family HMM PF01209 methlytransferase, UbiE/COQ5 family	
ECOLI00199	Membrane-bound lytic murein transglycosylase D	Membrane-bound lytic murein transglycosylase D	Membrane-bound lytic murein transglycosylase D	Soluble lytic murein transglycosylase	Membrane-bound lytic murein transglycosylase d	Related to membrane-bound lytic murein transglycosylase D	Membrane-bound lytic murein transglycosylase D presursor	Putative exported transglycosylase protein	Membrane-bound lytic murein transglycosylase D	Membrane-bound lytic murein transglycosylase D precursor	Membrane-bound lytic murein transglycosylase D	Putative membrane-bound lytic murein transglycosylase D	Putative membrane-bound lytic murein transglycosylase D	Membrane-bound lytic murein transglycosylase D	Membrane-bound lytic murein transglycosylase D	Putative membrane-bound lytic murein transglycosylase D	REGULATORY PROTEIN DNIR	Membrane-bound lytic murein transglycosylase D, putative	Membrane-bound lytic murein transglycosylase D, putative	Membrane-bound lytic murein transglycosylase D	Transcriptional regulator for nitrite reductase	Transglycosylase, SLT family	Soluble lytic murein transglycosylase	Residues 1 to 402 of 402 are 98 pct identical to residues 47 to 452 of a 452 aa protein from Escherichia coli K12 ref: NP_414747.1 transcriptional regulator for nitrite reductase (cytochrome c552)	Membrane-bound lytic murein transglycosylase D	SLT domain:LysM motif	Putative membrane-bound lytic murein transglycosylase-like lipoprotein	Membrane-bound lytic murein transglycosylase D	Similar to membrane bound lytic murein transglycosylase hypothetical protein	
ECOLI00200	Hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase	Probable hydroxyacylglutathione hydrolase C824.07 [Source:GeneDB_Spombe;Acc:SPAC824.07]	Hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase	HYDROXYACYL GLUTATHION HYDROLASE;02_0580,HYDROXYACYL GLUTATHION HYDROLASE, GLO2_yeast, gene found by Glimmer;	Hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase, putative	Putative metallo-beta-lactamase	Hydroxyacylglutathione hydrolase	Putative hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase, putative	Hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase	Probable hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase	Hydroxyacylglutathione hydrolase	Putative glyoxylase II	Putative gultathione hydrolase	putative hydroxyacylglutathione hydrolase GloB	Hydroxyacylglutathione hydrolase	Probable hydroxyacylglutathione hydrolase	similar to GB:M88458, SP:P33947, and PID:31218; identified by sequence similarity; putative hydroxyacylglutathione hydrolase, putative	Hydroxyacylglutathione hydrolase	Probable hydroxyacylglutathione hydrolase	
ECOLI00202	Ribonuclease HI	Ribonuclease H	Ribonuclease HI	Ribonuclease HI	Ribonuclease H	Ribonuclease HI	Ribonuclease H	Ribonuclease H	Ribonuclease HI	Ribonuclease HI	Ribonuclease HI	Ribonuclease HI	Ribonuclease HI	Ribonuclease HI	Ribonuclease H	Ribonuclease H	Ribonuclease H	Ribonuclease H	Ribonuclease HI	Ribonuclease HI	Ribonuclease H	putative ribonuclease HI	RnhA protein	Ribonuclease HI	similar to GP:15073845, GB:J05412, GB:M18963, GB:L08010, GB:J05413, SP:P05451, SP:P48304, PID:190979, PID:190981, PID:474306, PID:474308, PID:487726, and PID:623413; identified by sequence similarity; putative ribonuclease H	Ribonuclease H	Ribonuclease HI	Ribonuclease H	Ribonuclease H	
ECOLI00201	Uncharacterized protein yafS	Putative uncharacterized protein	SAM-dependent methyltransferase	Putative uncharacterized protein STY0283	hypothetical SAM-dependent methyltransferase	Hypothetical protein yafS	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative SAM-dependent methyltransferase	Putative uncharacterized protein yafS	Methyltransferase	SAM-dependent methyltransferase	Residues 1 to 241 of 241 are 98 pct identical to residues 6 to 246 of a 246 aa protein from Escherichia coli K12 ref: NP_414749.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YafS of Escherichia coli	putative SAM-dependent methyltransferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	methyltransferase	SAM-dependent methyltransferases SmtA protein	SAM-dependent methyltransferase	Putative SAM-dependent methyltransferase	identified by similarity to OMNI:VC2235 conserved hypothetical protein	conserved hypothetical protein	Code: QR; COG: COG0500 conserved hypothetical protein	generic methyl-transferase	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function ; putative S-adenosyl-L-methionine-dependent methyltransferase	Code: QR; COG: COG0500 conserved hypothetical protein	
ECOLI00203	DNA polymerase III subunit epsilon	DNA polymerase III epsilon chain	DNA polymerase III epsilon chain	DNA polymerase III, subunit epsilon	DNA polymerase III subunit epsilon	DNA polymerase III subunit epsilon	DNA polymerase III, epsilon subunit	DNA polymerase III subunit epsilon	DNA polymerase III, epsilon subunit	DNA polymerase III subunit epsilon	DNA polymerase III, epsilon chain	DNA polymerase III, epsilon subunit, putative	DNA polymerase III, epsilon subunit	Hypothetical conserved protein	DNA polymerase III, epsilon chain	DNA polymerase III subunit epsilon	DNA polymerase III, epsilon chain	DNA polymerase III, epsilon subunit	Putative DNA polymerase III, epsilon subunit	DNA polymerase III, epsilon chain	similar to GB:D13635, and PID:285983; identified by sequence similarity; putative DNA polymerase III, epsilon subunit	DNA polymerase III, epsilon subunit	DNA polymerase III subunit epsilon	DNA polymerase III, epsilon chain	DNA polymerase III, epsilon chain	DNA polymerase III, epsilon subunit	DNA polymerase III, epsilon chain	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DNA POLYMERASE III, EPSILON CHAIN PROTEIN	DNA polymerase III subunit epsilon	
ECOLI00204	Uncharacterized lipoprotein yafT	putative aminopeptidase	Hypothetical lipoprotein	Putative aminopeptidase	putative aminopeptidase	Putative lipoprotein	Predicted aminopeptidase	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative aminopeptidase	Putative aminopeptidase	Putative aminopeptidase	Putative aminopeptidase	Putative aminopeptidase	Putative aminopeptidase	YafT protein	Predicted aminopeptidase	Predicted aminopeptidase	putative aminopeptidase	Predicted aminopeptidase	
ECOLI00205	Uncharacterized protein ykfM	Putative uncharacterized protein ykfM	conserved predicted protein	
ECOLI00206	Putative inner membrane protein yafU	
ECOLI00207	Putative uncharacterized protein yafF	
ECOLI00208	UPF0012 hydrolase yafV	Hydrolase	Putative amidohydrolase	Carbon-nitrogen hydrolase family protein	Putative hydrolase	Putative uncharacterized protein	Probable carbon-nitrogen hydrolase	Possible hydrolase	Putative uncharacterized protein	Lmo0282 protein	Putative amidohydrolase	Nitrilase	Hypothetical protein yafV	Putative carbon-nitrogen hydrolase	Hydrolase, carbon-nitrogen family	Hydrolase, carbon-nitrogen family	Putative carbon-nitrogen hydrolase	Putative amidohydrolase	Putative EC 3.5. amidase-type enzyme	CDS_ID OB3111 hypothetical protein	Predicted amidohydrolase	BH1047 protein	Lin0310 protein	Putative uncharacterized protein	Residues 1 to 259 of 259 are 97 pct identical to residues 1 to 259 of a 259 aa protein from Escherichia coli dbj: BAA77889.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein lp_0433	identified by match to protein family HMM PF00795 hydrolase, carbon-nitrogen family	conserved hypothetical protein	
ECOLI00209	Inhibitor of vertebrate lysozyme	Inhibitor of vertebrate lysozyme	Residues 1 to 157 of 157 are 99 pct identical to residues 1 to 157 of a 157 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285937.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	hypothetical protein	orf conserved hypothetical protein	Inhibitor of vertebrate lysozyme	Inhibitor of vertebrate lysozyme	hypothetical protein KEGG: bur:Bcep18194_B2474 hypothetical protein	conserved hypothetical protein	inhibitor of vertebrate C-lysozyme	Inhibitor of vertebrate lysozyme	Inhibitor of vertebrate C-lysozyme	Inhibitor of vertebrate lysozyme	Inhibitor of vertebrate lysozyme precursor	Inhibitor of vertebrate lysozyme	Inhibitor of vertebrate lysozyme	Probable inhibitor of vertebrate lysozyme	Inhibitor of vertebrate lysozyme	Inhibitor of vertebrate lysozyme	Putative uncharacterized protein	Inhibitor of vertebrate C-lysozyme	Inhibitor of vertebrate C-lysozyme	Inhibitor of vertebrate C-lysozyme	Inhibitor of vertebrate C-lysozyme	Inhibitor of vertebrate C-lysozyme	Inhibitor of vertebrate C-lysozyme	Inhibitor of vertebrate C-lysozyme	
ECOLI00210	Acyl-coenzyme A dehydrogenase	Probable acyl-CoA dehydrogenase	Oxidoreductase, acyl-CoA dehydrogenase family	Acyl-coenzyme A dehydrogenase	putative oxidoreductase, acyl-CoA dehydrogenase family	Butyryl-CoA dehydrogenase	Acyl-coenzyme A dehydrogenase	Oxidoreductase, acyl-CoA dehydrogenase family	Putative acyl-CoA dehydrogenase	Oxidoreductase, acyl-CoA dehydrogenase family	Acyl-coenzyme A dehydrogenase	Acyl-CoA dehydrogenase family protein	Putative acyl-CoA dehydrogenase	Oxidoreductase, acyl-CoA dehydrogenase family	Acyl-coenzyme A dehydrogenase	Oxidoreductase	Residues 1 to 840 of 840 are 99 pct identical to residues 1 to 840 of a 840 aa protein from Escherichia coli dbj: BAA77891.1 acyl-CoA dehydrogenase	Acyl-coenzyme A dehydrogenase	Acyl-CoA dehydrogenase	Putative transmembrane acyl-coa dehydrogenase oxidoreductase protein	Similar to putative acyl-CoA dehydrogenase YafH of Escherichia coli	similar to acyl-CoA dehydrogenase hypothetical protein	conserved gene oxidoreductase, acyl CoA dehydrogenase family	similar to acyl-CoA dehydrogenase hypothetical protein	Probable acyl-CoA dehydrogenase	FadE10	Uncharacterized protein Rv0873/MT0896	Mb0897, fadE10, len: 650 aa. Equivalent to Rv0873, len: 650 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 650 aa overlap). Probable fadE10, acyl-CoA dehydrogenase (EC 1.3.99.-), highly similar to many e.g. CAB91129.1|AL355913 putative acyl CoA dehydrogenase from Streptomyces coelicolor (658 aa); P50544|ACDV_MOUSE ACYL-COA DEHYDROGENASE from Mus musculus (656 aa); D30647|RATVLCAD_1 very-long-chain Acyl-CoA dehydrogenase from Rattus norvegicus (655 aa), FASTA scores: opt: 675, E(): 0, (33.9% identity in 380 aa overlap); etc. PROBABLE ACYL-COA DEHYDROGENASE FADE10	putative acyl-CoA dehydrogenase	
ECOLI00211	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase 1	Phosphoheptose isomerase	Phosphoheptose isomerase	putative phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Probable phosphoheptose isomerase	probable phosphoheptose isomerase	Possible phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	Residues 49 to 246 of 246 are 100 pct identical to residues 1 to 198 of a 198 aa protein from Escherichia coli gb: AAB08644.1 orf, conserved hypothetical protein	Phosphoheptose isomerase	Phosphoheptose isomerase	Phosphoheptose isomerase	identified by similarity to SP:Q9AGY7; match to protein family HMM PF01380; match to protein family HMM TIGR00441 phosphoheptose isomerase	Phosphoheptose isomerase	Mb0117, gmhA, len: 196 aa. Equivalent to Rv0113, len: 196 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 196 aa overlap). Probable gmhA (alternate gene name: lpcA), phosphoheptose isomerase (EC 5.-.-.-), similar to many e.g. AE0005|HPAE000596_11 from Helicobacter pylori (192 aa), FASTA scores: opt: 451, E(): 1.9e-24, (45.1% identity in 162 aa overlap). BELONGS TO THE SIS FAMILY, LPCA SUBFAMILY. PROBABLE PHOSPHOHEPTOSE ISOMERASE GMHA	
ECOLI00213	Uncharacterized protein yafK	Hypothetical protein yafK	Putative exported protein	Uncharacterized protein yafK	hypothetical protein	Residues 1 to 246 of 246 are 99 pct identical to residues 1 to 246 of a 246 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285941.1 orf, conserved hypothetical protein	Putative exported protein	Similar to putative exported protein YafK of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative uncharacterized protein	Putative exported protein	Putative periplasmic protein	Code: S; COG: COG3034 conserved hypothetical protein	Code: S; COG: COG3034 conserved hypothetical protein	Code: S; COG: COG3034; orf conserved hypothetical protein	Putative periplasmic protein	Hypothetical protein precursor	2-dehydro-3-deoxyphosphooctonate aldolase	Hypothetical protein	Probable membrane protein	conserved hypothetical protein KEGG: rsp:RSP_1201 hypothetical protein	Hypothetical protein	Putative lipoprotein	Putative exported protein precursor	conserved hypothetical protein Code: S; COG: COG3034	Hypothetical protein precursor	Hypothetical lipoprotein	conserved hypothetical protein	
ECOLI00212	Putative glutamine amidotransferase yafJ	Putative glutamine amidotransferase HI1037	Predicted glutamine amidotransferase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted glutamine amidotransferase	Putative uncharacterized protein	Putative uncharacterized protein STY0356	All0327 protein	Family C44 non-peptidase homologue	putative amidotransferase	Hypothetical protein yafJ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative amidotransferase	Putative amidotransferase	Predicted glutamine amidotransferase	Glutamine amidotransferase	Residues 6 to 260 of 260 are 99 pct identical to residues 1 to 255 of a 255 aa protein from Escherichia coli K12 ref: NP_414758.1 putative amidotransferase	Putative uncharacterized protein	Probable glutamine amidotransferase, class-II; protein	Similar to putative amidotransferase YafJ of Escherichia coli	hypothetical protein	Probable amidotransferase	putative glutamine amidotransferase	
ECOLI00214	Uncharacterized protein yafQ	EF0033	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Identified by comparison to Escherichia coli pseudo hypothetical protein	Similar to unknown protein YafQ of Escherichia coli	Putative uncharacterized protein	Conserved hypothetical protein	Similar to: HI0711, YAFQ_HAEIN conserved hypothetical protein	Putative cytoplasmic protein	identified by match to protein family HMM PF05016; match to protein family HMM TIGR02385 addiction module toxin, RelE/StbE family	Plasmid stabilization system	Conserved hypothetical protein	Code: S; COG: COG3041 conserved hypothetical protein	conserved hypothetical protein	Addiction module toxin, RelE/StbE	Code: S; COG: COG3041; orf conserved hypothetical protein	Hypothetical protein	hypothetical protein similarity to COG3041 Uncharacterized BCR	DNA damage inducible protein	hypothetical protein	Hypothetical protein	conserved hypothetical protein	Addiction module toxin, RelE/StbE family	addiction module toxin, RelE/StbE family TIGRFAM: addiction module toxin, RelE/StbE family PFAM: plasmid stabilization system KEGG: rpc:RPC_1376 addiction module toxin, RelE/StbE	Hypothetical protein	
ECOLI00215	DNA-damage-inducible protein J	DNA-damage-inducible protein J	Putative uncharacterized protein	Damage-inducible protein J	DNA-damage-inducible protein	pseudo	Putative DNA-damage-inducibile protein	Damage inducible-like protein, Anti-RelE antitoxin	identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384 DNA-damage-inducible protein	DNA-damage-inducible protein J	Code: L; COG: COG3077 damage-inducible protein J	RelB antitoxin	RelB antitoxin	Code: L; COG: COG3077 damage-inducible protein J	DNA-damage-inducible protein J	DNA-damage-inducible protein J	Addiction module antitoxin, RelB/DinJ family	addiction module antitoxin, RelB/DinJ family TIGRFAM: addiction module antitoxin, RelB/DinJ family PFAM: RelB antitoxin KEGG: rpc:RPC_1377 RelB antitoxin	DinJ-like protein	DNA-damage-inducible protein J	DNA-damage-inducible protein J	DNA-damage-inducible protein J	Addiction module antitoxin, RelB/DinJ family	Addiction module antitoxin, RelB/DinJ family	DNA-damage-inducible protein J	Addiction module antitoxin, RelB/DinJ family	Predicted antitoxin of YafQ-DinJ toxin-antitoxin system	DNA-damage-inducible protein J	Addiction module antitoxin, RelB/DinJ family	
ECOLI00216	Uncharacterized lipoprotein yafL	Putative lipoprotein	similar to Escherichia coli K12 putative lipoprotein gi: 1786421 (250 aa). BLAST with identity of 93% in 176 aa. This CDS has been truncated. The sequence has been checked and is believed to be correct. pseudo	Code: M; COG: COG0791 putative lipoprotein	Code: M; COG: COG0791 putative lipoprotein	Putative lipoprotein	Hypothetical lipoprotein YafL	putative lipoprotein Code: M; COG: COG0791	putative lipoprotein	NlpC/P60 family protein	Predicted lipoprotein and C40 family peptidase	NlpC/P60 family protein	NLP/P60 protein	NlpC/P60 family protein	Putative uncharacterized protein	YafL	NlpC/P60 family protein	Putative lipoprotein	Putative exported hydrolase	Putative exported hydrolase	Putative exported hydrolase	Putative exported hydrolase	Putative exported hydrolase	Predicted lipoprotein	Putative exported hydrolase	YafL protein	Predicted lipoprotein and C40 family peptidase	Predicted lipoprotein and C40 family peptidase	predicted lipoprotein and C40 family peptidase	
ECOLI00216	Uncharacterized lipoprotein yafL	Putative lipoprotein	similar to Escherichia coli K12 putative lipoprotein gi: 1786421 (250 aa). BLAST with identity of 93% in 176 aa. This CDS has been truncated. The sequence has been checked and is believed to be correct. pseudo	Code: M; COG: COG0791 putative lipoprotein	Code: M; COG: COG0791 putative lipoprotein	Putative lipoprotein	Hypothetical lipoprotein YafL	putative lipoprotein Code: M; COG: COG0791	putative lipoprotein	NlpC/P60 family protein	Predicted lipoprotein and C40 family peptidase	NlpC/P60 family protein	NLP/P60 protein	NlpC/P60 family protein	Putative uncharacterized protein	YafL	NlpC/P60 family protein	Putative lipoprotein	Putative exported hydrolase	Putative exported hydrolase	Putative exported hydrolase	Putative exported hydrolase	Putative exported hydrolase	Predicted lipoprotein	Putative exported hydrolase	YafL protein	Predicted lipoprotein and C40 family peptidase	Predicted lipoprotein and C40 family peptidase	predicted lipoprotein and C40 family peptidase	
ECOLI00217	Uncharacterized protein yafM	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yafM	Residues 1 to 164 of 165 are 94 pct identical to residues 1 to 164 of a 165 aa protein from Escherichia coli K12 ref: NP_414763.1 orf, conserved hypothetical protein	similar to transposase hypothetical protein	Similar to transposase hypothetical protein	similar to Salmonella typhi Ty2 conserved hypothetical protein conserved hypothetical protein	Hypothetical protein	Transposase related protein	Code: L; COG: COG1943 conserved hypothetical protein	Protein of unknown function DUF1568	Transposase, putative	conserved hypothetical protein	Transposase and inactivated derivatives COG1943	Code: L; COG: COG1943; orf conserved hypothetical protein	protein of unknown function DUF1568	Putative uncharacterized protein	Protein of unknown function DUF1568	Hypothetical protein yafM	transposase and inactivated derivatives	Putative uncharacterized protein yafM	Transposase and inactivated derivatives-like protein	protein of unknown function DUF1568 PFAM: protein of unknown function DUF1568 KEGG: rpb:RPB_1952 protein of unknown function DUF1568	Hypothetical protein	Transposase and inactivated derivative	conserved hypothetical protein Code: L; COG: COG1943	hypothetical protein DUF1568 PFAM: protein of unknown function DUF1568 KEGG: ana:alr4734 hypothetical protein	conserved hypothetical protein	
ECOLI00218	Putative protein fhiA	Putative flagellar biosynthesis protein	FhiA protein	Flagellar biosynthesis protein	Flagellar biosynthesis	Residues 1 to 578 of 579 are 98 pct identical to residues 1 to 578 of a 579 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285946.1 flagellar biosynthesis	FhiA protein	Flagellar biosynthesis protein FlhA	Putative flagellar biosynthesis/export membrane protein flhA, fhiA.	Code: NU; COG: COG1298 flagellar biosynthesis	Pfam: FHIPEP family (Flagellar/Hr/Invasion proteins export pore) Citation: Type III secretion machines: bacterial devices for protein delivery into host cells.  Science. 1999 May 21;284(5418):1322-8. Rev Flagellar biosynthesis pathway, component FlhA	Flagellar biosynthetic protein FlhA	Flagellar biosynthesis protein FlhA precursor	Hypothetical protein	FhiA protein	type III secretion FHIPEP protein PFAM: type III secretion FHIPEP protein KEGG: sil:SPO0170 flagellar biosynthesis protein FlhA	flagellar biosynthesis protein FlhA identified by match to protein family HMM PF00771; match to protein family HMM TIGR01398	Lateral flagellar biosynthesis protein	flagellar biosynthesis protein FlhA TIGRFAM: flagellar biosynthesis protein FlhA PFAM: type III secretion FHIPEP protein KEGG: rsp:RSP_1320 flagellar biosynthesis pathway, component FlhA	flagellar biosynthetic protein FlhA Code: NU; COG: COG1298	flagellar biosynthesis protein FlhA TIGRFAM: flagellar biosynthesis protein FlhA PFAM: type III secretion FHIPEP protein KEGG: sdn:Sden_3668 flagellar biosynthesis protein FlhA	Hypothetical protein	type III secretion FHIPEP protein PFAM: type III secretion FHIPEP protein KEGG: vpa:VPA1546 flagellar biosynthesis protein	type III secretion FHIPEP PFAM: type III secretion FHIPEP KEGG: yps:pYV0060 putative membrane-bound Yop protein	FhiA protein	Flagellar biosynthesis protein FlhA precursor	Flagellar biosynthesis protein FlhA precursor	Flagellar biosynthesis protein FlhA	TIGRFAM: flagellar biosynthesis protein FlhA PFAM: type III secretion FHIPEP protein KEGG: shw:Sputw3181_0454 flagellar biosynthesis protein FlhA flagellar biosynthesis protein FlhA	
ECOLI00219	Putative protein mbhA	Putative motility protein	Residues 2 to 262 of 262 are 98 pct identical to residues 1 to 261 of a 261 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285947.1 putative motility protein	Putative chemotaxis membrane protein	Code: N; COG: COG1360 putative motility protein	Code: N; COG: COG1360 putative motility protein	Putative chemotaxis membrane protein	Putative motility protein MbhA	putative motility protein Code: N; COG: COG1360	putative motility protein MbhA	Putative chemotaxis MotB protein	Putative chemotaxis protein	MotB	pseudo	Chemotaxis motB protein	Putative chemotaxis protein	OmpA/MotB domain protein	Lateral flagellar motor protein B	Chemotaxis motB protein	Chemotaxis motB protein	Putative chemotaxis protein	Putative motility protein	Flagellar system protein	Flagellar system protein	Flagellar system protein	Flagellar system protein	Flagellar system protein	Flagellar system protein MbhA	Flagellar system protein	
ECOLI00220	DNA polymerase IV	ImpB/MucB/SamB family protein	DNA polymerase IV	DNA polymerase IV	Uncharacterized protein MG360	Uncharacterized protein MG360 homolog	DNA damage-inducible protein	Putative uncharacterized protein	DNA-damage-inducible protein P	DNA polymerase IV	DNA-damage-inducible protein P	DNA polymerase IV	DNA polymerase IV	DNA polymerase IV	DNA polymerase IV	DNA polymerase IV	DNA polymerase IV 2	DNA polymerase IV	DNA polymerase IV	DNA polymerase IV	DNA polymerase IV	DNA polymerase IV	DNA polymerase IV	Possible DNA-damage-inducible protein P, DNA polymerase IV	Putative DNA polymerase IV	putative DNA-damage-inducible protein P	DNA polymerase IV	DNA polymerase IV	DNA polymerase IV	
ECOLI00221	Uncharacterized protein yafN	Putative uncharacterized protein yafN	Residues 1 to 97 of 97 are 98 pct identical to residues 1 to 97 of a 97 aa protein from Escherichia coli K12 ref: NP_414767.1 orf, conserved hypothetical protein	Antitoxin of toxin-antitoxin stability system, StbD family	identified by match to protein family HMM PF02604; match to protein family HMM TIGR01552 prevent-host-death family protein	Prevent-host-death protein	Putative uncharacterized protein	Putative uncharacterized protein yafN	conserved hypothetical protein Code: D; COG: COG2161	predicted antitoxin of the YafO-YafN toxin-antitoxin system	Predicted antitoxin of the YafO-YafN toxin- antitoxin system	Prevent-host-death family protein	Addiction module antitoxin, Axe family	Addiction module antitoxin, Axe family	Putative antitoxin of the YafO-YafN toxin- antitoxin system	Putative antitoxin of the YafO-YafN toxin- antitoxin system	Putative antitoxin of the YafO-YafN toxin- antitoxin system	Prevent-host-death protein	YafN protein	Predicted antitoxin of the YafO-YafN toxin- antitoxin system	Predicted antitoxin of the YafO-YafN toxin- antitoxin system	Prevent-host-death family protein	Predicted antitoxin of the YafO-YafN toxin- antitoxin system	
ECOLI00222	Uncharacterized protein yafO	Residues 1 to 132 of 132 are 99 pct identical to residues 1 to 132 of a 132 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285950.1 orf, conserved hypothetical protein	Similar to unknown protein YafO of Escherichia coli	Uncharacterized conserved protein, YafO-like	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yafO	conserved hypothetical protein	conserved hypothetical protein	Predicted toxin of the YafO-YafN toxin-antitoxin system	Putative uncharacterized protein	Putative toxin of the YafO-YafN toxin-antitoxin system	Putative toxin of the YafO-YafN toxin-antitoxin system	YafO protein	Predicted toxin of the YafO-YafN toxin-antitoxin system	Predicted toxin of the YafO-YafN toxin-antitoxin system	Predicted toxin of the YafO-YafN toxin-antitoxin system	
ECOLI00223	Uncharacterized N-acetyltransferase yafP	Sll1671 protein	Putative acetyltransferase	Putative acetyltransferase	All3024 protein	Acetyltransferase	Acetyltransferase, GNAT family	Hypothetical acetyltransferase yafP	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family, putative	Acetyltransferase, GNAT family	PMID: 9835490 best DB hits: BLAST: embl:CAA08848.1; (AJ009820) hypothetical protein [Salmonella; E=2e-16 gb:AAG17708.1; AF282595_4 (AF282595) unknown [Klebsiella; E=2e-16 pir:S74655; hypothetical protein sll1671 - Synechocystis sp. (strain; E=2e-15 COG: sll1671; COG0454 Histone acetyltransferase HPA2 and related; E=2e-16 PFAM: PF00583; Acetyltransferase (GNAT) family; E=3.9e-17 conserved hypothetical protein-putative acetyltransferase	hypothetical protein	Putative acetyltransferase	Putative uncharacterized protein yafP	GCN5-related N- acetyltransferase:Aminotransferase, class-II	Residues 1 to 150 of 150 are 91 pct identical to residues 1 to 150 of a 150 aa protein from Escherichia coli K12 ref: NP_414769.1 orf, conserved hypothetical protein	Putative acyltransferase protein	Putative uncharacterized protein yafE	IPR000182: GCN5-related N-acetyltransferase putative acetyltransferase	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	acetyltransferase	Acetyltransferase, GNAT family	Putative acetyltransferase	GCN5-related N-acetyltransferase	GCN5-related N-acetyltransferase	Code: KR; COG: COG0454 conserved hypothetical protein	GCN5-related N-acetyltransferase	GCN5-related N-acetyltransferase	GCN5-related N-acetyltransferase	
ECOLI00224	Putative uncharacterized protein ykfJ	Code: S; COG: COG1690; orf conserved hypothetical protein	pseudo	Release factor H-coupled RctB family protein	YkfJ protein	Putative uncharacterized protein	
ECOLI00225	Putative peptide chain release factor homolog	Probable peptide chain release factor	Putative peptide chain release factor	Putative peptide chain release factor	Peptide chain release factor homolog	Putative peptide chain release factor	Probable peptide chain release factor	Protein chain release factor B	Residues 21 to 151 of 151 are 97 pct identical to residues 1 to 131 of a 166 aa protein from Escherichia coli K12 ref: NP_414771.1 probable peptide chain release factor	Putative peptide chain release factor homolog protein	IPR000352: Class I peptide chain release factor domain putative peptide chain release factor	similar to Salmonella typhi CT18 putative peptide chain release factor putative peptide chain release factor	Similar to Salmonella typhi, and Salmonella typhimurium putative peptide chain release factor PrfH or T2535 or STM0315 or STY0360 SWALL:AAO70119 (EMBL:AE016842) (204 aa) fasta scores: E(): 9.5e-32, 46.04% id in 202 aa, and to Escherichia coli peptide chain release factor homolog PrfH or B0236 SWALL:RFH_ECOLI (SWALL:P28369) (141 aa) fasta scores: E(): 4.9e-22, 53.03% id in 132 aa putative peptide chain release factor	Putative peptide chain release factor	identified by match to protein family HMM PF00472 peptide chain release factor 2	Code: J; COG: COG1186 probable peptide chain release factor	Code: J; COG: COG1186 probable peptide chain release factor	Class I peptide chain release factor	Code: J; COG: COG1186 probable peptide chain release factor	Putative peptide chain release factor	putative peptide chain release factor	Peptide chain release factor-like protein	putative peptide chain release factor	putative peptide chain release factor Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type f : factor	Putative Class I peptide chain release factor domain protein	Putative Class I peptide chain release factor domain protein	peptide chain release factor-like protein	Putative peptide chain release factor H	Class I peptide chain release factor	
ECOLI00226	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	PepD	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Xaa-His dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	putative aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	identified by match to protein family HMM PF01546; match to protein family HMM TIGR01893 aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	PEPTIDASE-Di-tripeptidases	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase, putative	Aminoacyl-histidine dipeptidase	Residues 1 to 485 of 485 are 99 pct identical to residues 1 to 485 of a 485 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285954.1 aminoacyl-histidine dipeptidase (peptidase D)	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	Aminoacyl-histidine dipeptidase	IPR001160: Peptidase M20C, X-His dipeptidase aminoacyl-histidine dipeptidase (peptidase D)	
ECOLI00227	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Putative xanthine-guanine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	identified by match to TIGR protein family HMM TIGR01203 phosphoribosyltransferase family protein	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE PROTEIN	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	xanthine-guanine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Residues 1 to 152 of 152 are 100 pct identical to residues 1 to 152 of a 152 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285955.1 guanine-hypoxanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase	identified by similarity to SP:P00501; match to protein family HMM PF00156 xanthine-guanine phosphoribosyltransferase	Xanthine-guanine phosphoribosyltransferase protein	IPR002375: Purine/pyrimidine phosphoribosyl transferase guanine-hypoxanthine phosphoribosyltransferase	similar to Salmonella typhi CT18 xanthine-guanine phosphoribosyltransferase xanthine-guanine phosphoribosyltransferase	
ECOLI00228	Esterase frsA	Esterase frsA	Conserved hypothetical protein	Esterase yafA	UPF0255 protein VC_2276	UPF0255 protein ECA3465	UPF0255 protein VP0674	Esterase frsA	UPF0255 protein VV1_0328	Residues 1 to 414 of 414 are 99 pct identical to residues 1 to 414 of a 414 aa protein from Escherichia coli K12 ref: NP_414774.1 orf, conserved hypothetical protein	UPF0255 protein YPO3224/y0964/YP_0709	UPF0255 protein plu1242	Putative uncharacterized protein	Putative uncharacterized protein	IPR000379: Esterase/lipase/thioesterase putative hydrolase of the alpha/beta superfamily	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0255 protein YPTB0902	alpha/beta hydrolase	Esterase frsA	Code: R; COG: COG1073 conserved hypothetical protein	Code: R; COG: COG1073 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG1073; orf conserved hypothetical protein	Esterase frsA	Hypothetical protein	Esterase frsA	Hypothetical protein	esterase YafA identified by match to protein family HMM PF06500	Hypothetical protein	
ECOLI00229	Sigma factor-binding protein crl	Hypothetical transcriptional regulator Crl	Sigma factor-binding protein crl	Sigma factor-binding protein crl	Sigma factor-binding protein crl	Sigma factor-binding protein crl	Sigma factor-binding protein crl	Residues 1 to 133 of 133 are 99 pct identical to residues 1 to 133 of a 133 aa protein CRL_ECOLI sp: P24251 curlin genes transcriptional activatory protein	Sigma factor-binding protein crl	transcriptional regulator of cryptic csgA gene for curli surface fibers	similar to Salmonella typhi CT18 curlin genes transcriptional activator curlin genes transcriptional activator	Sigma factor-binding protein crl	Sigma factor-binding protein crl	transcriptional regulator of cryptic csgA gene for curli surface fibers	transcriptional regulator of cryptic csgA gene for curli surface fibers Crl	transcriptional regulator of cryptic csgA gene for curli surface fibers Crl	Sigma factor-binding protein crl	Curlin genes regulatory protein	Sigma factor-binding protein crl	Curlin genes regulatory protein	curlin genes transcriptional activatory protein identified by similarity to SP:P24251; match to protein family HMM PF07417	Curlin genes regulatory protein	Curlin genes transcriptional regulator	transcriptional regulator of cryptic csgA gene for curli surface fibers	Curlin genes regulatory protein	transcriptional regulator Crl KEGG: ppr:PBPRA0838 hypothetical transcriptional regulator Crl	crl transcriptional regulator	Sigma factor-binding protein crl	Transcriptional regulator of cryptic csgA gene for curli surface fibers	
ECOLI00230	Outer membrane pore protein E	Outer membrane pore protein E	Outer membrane pore protein E	Residues 1 to 353 of 353 are 99 pct identical to residues 1 to 353 of a 353 aa protein from Escherichia coli gb: AAB08661.1 outer pore protein E precursor	IPR001702: Porin, Gram-negative type; IPR001897: Porin, bacterial type outer membrane pore protein e (e,ic,nmpab)	similar to Salmonella typhi CT18 outer membrane pore protein E precursor outer membrane pore protein E precursor	Outer membrane pore protein E	Code: M; COG: COG3203 outer membrane pore protein E (E,Ic,NmpAB)	E,Ic,NmpAB; Code: M; COG: COG3203 outer membrane pore protein E	Outer membrane pore protein E	Outer membrane pore protein E	Outer membrane protein C2 precursor	outer membrane pore protein E (E,Ic,NmpAB) Code: M; COG: COG3203	outer membrane pore protein E precursor	Porin, Gram-negative type precursor	Outer membrane pore protein E	Putative uncharacterized protein	Outer membrane pore protein E	Outer membrane phosphoporin protein E	Outer membrane pore protein E	Porin Gram-negative type precursor	Outer membrane pore protein E	Putative uncharacterized protein	Porin Gram-negative type precursor	Putative uncharacterized protein	Putative uncharacterized protein	Outer membrane pore protein E	Outer membrane pore protein E	Outer membrane pore protein E	
ECOLI00231	Glutamate 5-kinase	glutamate 5-kinase;	similar to sp|P32264 Saccharomyces cerevisiae YDR300c PRO1 glutamate 5-kinase, hypothetical start	Glutamate 5-kinase	Probable glutamate 5-kinase [Source:GeneDB_Spombe;Acc:SPAC17H9.13c]	highly similar to sp|P32264 Saccharomyces cerevisiae YDR300c PRO1 glutamate 5-kinase, start by similarity	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	highly similar to uniprot|P32264 Saccharomyces cerevisiae YDR300c PRO1 glutamate 5-kinase;	DEHA2A13838p;similar to uniprot|P32264 Saccharomyces cerevisiae YDR300C PRO1 Gamma-glutamyl kinase;	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	Glutamate 5-kinase	
ECOLI00232	Gamma-glutamyl phosphate reductase	gamma-glutamyl phosphate reductase;	Gamma-glutamyl phosphate reductase, catalyzes the second step in proline biosynthesis.  [Source:SGD;Acc:S000005850]	similar to sp|P54885 Saccharomyces cerevisiae YOR323c PRO2 gamma-glutamyl phosphate reductase, hypothetical start	Probable gamma-glutamyl phosphate reductase [Source:GeneDB_Spombe;Acc:SPAC821.11]	highly similar to sp|P54885 Saccharomyces cerevisiae YOR323c PRO2 gamma-glutamyl phosphate reductase singleton, start by similarity	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Probable gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	highly similar to uniprot|P54885 Saccharomyces cerevisiae YOR323c PRO2 gamma-glutamyl phosphate reductase;	DEHA2F02728p;similar to uniprot|P54885 Saccharomyces cerevisiae YOR323C PRO2 Gamma-glutamyl phosphate reductase catalyzes the second step in proline biosynthesis and highly similar to CA5926|CaPRO2 Candida albicans CaPRO2;	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase	
ECOLI00234	Uncharacterized protein ykfI	CP4-6 prophage; toxin of the YkfI-YafW toxin- antitoxin system	CP4-6 prophage; toxin of the YkfI-YafW toxin- antitoxin system	
ECOLI00235	Uncharacterized protein yafW	CP4-6 prophage; antitoxin of the YkfI-YafW toxin- antitoxin system	CP4-6 prophage; antitoxin of the YkfI-YafW toxin- antitoxin system	

ECOLI00237	Putative radC-like protein ykfG	identified by similarity to SP:P25531; match to protein family HMM PF04002; match to protein family HMM TIGR00608 DNA repair protein RadC	DNA repair protein RadC	DNA repair protein DNA repair protein radC homolog. High confidence in function and specificity	putative DNA repair protein RadC identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608	DNA repair protein RadC	CP4-6 prophage; predicted DNA repair protein	DNA repair protein RadC	DNA repair protein RadC	DNA repair protein radC homolog	DNA repair protein RadC	DNA repair protein RadC	CP4-6 prophage; predicted DNA repair protein	
ECOLI00238	Uncharacterized protein yafX	Putative uncharacterized protein	Antirestriction protein	Antirestriction protein PFAM: Antirestriction protein KEGG: reu:Reut_D6452 antirestriction protein	conserved hypothetical protein	Antirestriction protein	CP4-6 prophage; predicted protein	Antirestriction protein	Antirestriction protein	pseudo	Predicted protein	CP4-6 prophage; predicted protein	Putative antirestriction protein	
ECOLI00239	UPF0401 protein ykfF	UPF0401 protein UTI89_C4989	Putative uncharacterized protein	CP4-6 prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	CP4-6 prophage; predicted protein	
ECOLI00240	Uncharacterized protein ykfB	CP4-6 prophage; predicted protein	CP4-6 prophage; predicted protein	
ECOLI00241	Uncharacterized lipoprotein yafY	

ECOLI00243	UPF0380 protein yafZ	conserved hypothetical protein Specificity unclear	CP4-6 prophage; conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yafZ	CP4-6 prophage; conserved protein	
ECOLI00244	Uncharacterized protein ykfA	CP4-6 prophage; predicted GTP-binding protein	Putative uncharacterized protein	GTPase family protein	pseudo	CP4-6 prophage; predicted GTP-binding protein	YeeP	
ECOLI00245	HTH-type transcriptional regulator perR	transcriptional regulatory protein	transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: reu:Reut_B4774 regulatory protein, LysR:LysR, substrate-binding	Putative transcriptional regulatory protein, LysR family; putative peroxide resistance protein PerR	Putative transcriptional regulatory protein, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	CP4-6 prophage; predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative uncharacterized protein	Putative transcriptional regulator protein, LysR family	Transcriptional regulator	CP4-6 prophage; predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Uncharacterized HTH-type transcriptional regulator y4mQ	
ECOLI00246	Transposase insN for insertion sequence element IS911A	Related to transposase	transposase IS3/IS911	transposase-like	putative transposase OrfA; similar to Ralstonia solanacearum ISRS08 transposase ORFA protein (NP_518700)	Transposase IS3/IS911 family protein	CP4-6 prophage; partial regulator of insertion element IS911A	Transposase IS3/IS911 family protein	ISHde3, transposase orfA	
ECOLI04127	Transposase insI for insertion sequence element IS30B/C/D	Transposase	Putative transposase	Transposase insI for insertion sequence element IS30B/C/D	glimmer prediction; similarity to integrase core domain TRm24 transposase	Transposase, ISlxx5	Putative uncharacterized protein	Putative uncharacterized protein gbs0208	Similar to Bacteroides fragilis transposase for insertion sequence element IS4351 SWALL:TRA4_BACFR (SWALL:P37247) (326 aa) fasta scores: E(): 6.7e-44, 45% id in 320 aa, to Neisseria meningitidis putative transposase for IS1655 NMA1486 and NMA1481 SWALL:Q9JS36 (EMBL:AL162756) (321 aa) fasta scores: E(): 3.7e-36, 39.55% id in 316 aa, and to Alcaligenes eutrophus transposase for insertion sequence element IS1086 SWALL:TRA8_ALCEU (SWALL:P37248) (339 aa) fasta scores: E(): 3.3e-20, 33.33% id in 327 aa putative IS element	transposase for IS1513e	Integrase, catalytic region	similar to gi|2673748|emb|CAA05973.1| [Lactobacillus casei], percent identity 49 in 332 aa, BLASTP E(): 2e-77 transposase	Integrase	Integrase, catalytic region PFAM: Integrase, catalytic region KEGG: pfo:Pfl_2765 integrase, catalytic region	Integrase, catalytic region	putative transcriptional regulator, Fis family	Integrase	Integrase, catalytic region	Transposase, IS30 family	transposase, putative	Putative transposase IS30	Transposase	Hypothetical protein	Hypothetical protein	Transposase IS30	Integrase, catalytic region PFAM: Integrase, catalytic region KEGG: cbu:CBU_1544 transposase, IS30 family	Hypothetical protein	Transposase	Putative uncharacterized protein	
ECOLI00247	Putative transposase insO for insertion sequence element IS911A	Putative uncharacterized protein YPCD1.82c	IS600 ORF2	conserved hypothetical protein	putative transposase protein KEGG: rso:RSc2313 putative transposase protein	pseudo putative transposase, OrfB (N-terminal part) Evidence 7 : Gene remnant; Product type e : enzyme	IS600 ORF2	IS911 ORF2 KEGG: sdy:SDY_4291 IS911 ORF2	conserved hypothetical protein	CP4-6 prophage; partial transposase of insertion element IS911A	Integrase, catalytic region	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	pseudo	pseudo	pseudo	
ECOLI00248	Putative uncharacterized protein ykfC	Related to reverse transcriptase/maturase	hypothetical maturase	Residues 1 to 502 of 502 are 99 pct identical to residues 1 to 502 of a 502 aa protein from Escherichia coli ref: NP_053121.1 orf, conserved hypothetical protein	Reverse transcriptase/maturase protein	reverse transcriptase	Prophage LambdaSa1, reverse transcriptase/maturase family protein	RNA-directed DNA polymerase	Putative uncharacterized protein	RNA-directed DNA polymerase (Reverse transcriptase) PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein KEGG: mac:MA4626 reverse transcriptase	RNA-directed DNA polymerase PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein KEGG: sag:SAG0567 prophage LambdaSa1, reverse transcriptase/maturase family protein	Retron-type reverse transcriptase	RNA-directed DNA polymerase (Reverse transcriptase) PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein KEGG: plu:plu1111 hypothetical protein	group II intron, maturase identified by similarity to GB:AAB68949.1; match to protein family HMM PF00078	RNA-directed DNA polymerase	RNA-directed DNA polymerase	RNA-directed DNA polymerase	RNA-directed DNA polymerase	RNA-directed DNA polymerase	RNA-directed DNA polymerase	pseudo	RNA-directed DNA polymerase	Retron-type reverse transcriptase	Reverse transcriptase family protein	RNA-directed DNA polymerase	RNA-directed DNA polymerase PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein KEGG: mac:MA4626 reverse transcriptase	GBSi1, group II intron, maturase	RNA-directed DNA polymerase	RNA-directed DNA polymerase	
ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	
ECOLI00249	Probable S-methylmethionine permease	S-methylmethionine permease	Putative amino acid permease	Probable S-methylmethionine permease	Putative amino acid permease	Amino acid transport protein	amino acid permease	Molecular Function: amino acid-polyamine transporter activity (GO:0005279), Biological Process: amino acid transport (GO:0006865), Cellular Component: membrane (GO:0016020) Amino acid permease	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark S-methylmethionine permease	IPR002293: Amino acid/polyamine transporter, family I putative amino acid transporter	similar to Salmonella typhi CT18 putative amino acid permease putative amino acid permease	Putative uncharacterized protein gbs1378	S-methylmethionine permease	identified by match to PFAM protein family HMM PF00324 amino acid permease	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative APC family, S-methylmethionine transporter (MmuP)	Amino acid transporter, AAT family	L-Arginine permease	Putative amino acid transporter	S-methylmethionine permease	identified by match to protein family HMM PF00324 amino acid transporter, AAT family	identified by similarity to SP:P39137; match to protein family HMM PF00324 amino acid (AAT) family permease protein	Amino acid permease COG0531 [E] Amino acid transporters	amino acid transporter family protein	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: sco:SCO1683 amino acid permease	S-methylmethionine permease identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Amino acid transporter	amino acid permease COG family: amino acid transporters Orthologue of BL0758 PFAM_ID:aa_permeases	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: bld:BLi00265 similar to histidine permease; RBL01520	Amino acid permease	
ECOLI00250	Homocysteine S-methyltransferase	hypothetical protein;similar to S-adenosylmethionine:homocysteine S-methyltransferase;	weakly similar to tr|Q8DZ17 Streptococcus agalactiae putative homocysteine S-methyltransferase MmuM, hypothetical start	highly similar to sgd|S0006194 Saccharomyces cerevisiae YPL273w SAM4, start by similarity	Homocysteine S-methyltransferase	DEHA2A00616p;similar to uniprot|Q12525 Saccharomyces cerevisiae YLL062C MHT1 S-methylmethionine-homocysteine methyltransferase or uniprot|Q08985 Saccharomyces cerevisiae YPL273W SAM4 S-adenosylmethionine-homocysteine methyltransferase;	Putative homocysteine S-methyltransferase	S-methyltransferase	Possible transferase	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_function: homocysteine S-methyltransferase activity [goid 0008898]; go_process: sulfur amino acid metabolism [goid 0000096] homocysteine S-methyltransferase, putative	Homocysteine S-methyltransferase	Homocysteine S-methyltransferase family protein	Putative methyltransferase	Possible homocysteine S-methyltransferase	SC1A9.01c, possible transferase, partial CDS, len: 219 aa, similar to TR:O53185 (EMBL:AL021246) a proposed transferase from Mycobacterium tuberculosis (302 aa), fasta scores: opt: 764, z-score: 1097.3, E(): 0, (62.1% identity in 203 aa overlap (302 aa). Also weakly similar to several methyltransferases eg. METH_ECOLI (EMBL:X16584)5-methyltetrahydrofolate-homocysteine methyltransferase (1226 aa), fasta scores; opt:160, z-score: 234.8, E(): 8.4e-06, (30.0% identity in 220 aa overlap).  SC9B2.24c, partial CDS, possible transferase, len: 113aa; constitutes the C-terminal end of SC1A9.01c (EMBL:AL034446) partial CDS, putative transferase from Streptomyces coelicolor cosmid 1A9. Similar to many eg.  TR:O53185 (EMBL:AL021246) putative transferase from Mycobacterium tuberculosis (302 aa) fasta scores; opt: 441, z-score: 524.5, E(): 6.3e-22, (56.6% identity in 113 aa overlap) and TR:E1359661 (EMBL:AJ131433) selenocysteine methyltransferase from Astragalus bisulcatus (338 aa) fasta scores; opt: 303, z-score: 363.6, E(): 5.8e-13, (42.0% identity in 112 aa overlap). putative transferase	Homocysteine S-methyltransferase	identified by match to protein family HMM PF02574 homocysteine S-methyltransferase family protein	homocysteine S-methyltransferase (S-methylmethionine)	Putative uncharacterized protein	Homocysteine S-methyltransferase protein	PROBABLE HOMOCYSTEINE S-METHYLTRANSFERASE MMUM	Mb2485, mmuM, len: 302 aa. Equivalent to Rv2458, len: 302 aa, from Mycobacterium tuberculosis strain H37Rv, (99.7% identity in 302 aa overlap). Probable mmuM, homocysteine S-methyltransferase (EC 2.1.1.10), equivalent to Q9CBY5|ML1478 POSSIBLE TRANSFERASE from Mycobacterium leprae (293 aa), FASTA scores: opt: 1507, E(): 2.7e-86, (78.85% identity in 293 aa overlap). Also similar to others e.g. Q47690|MMUM_ECOLI|B0261 HOMOCYSTEINE S-METHYLTRANSFERASE from Escherichia coli strain K12 (310 aa), FASTA scores: opt: 863, E(): 2.4e-46, (47.65% identity in 298 aa overlap); Q9FUM7 HOMOCYSTEINE S-METHYLTRANSFERASE-4 from Zea mays (Maize) (342 aa), FASTA scores: opt: 324, E(): 6.8e-13, (44.45% identity in 306 aa overlap); Q9LUI7|HMT3 CYSTEINE METHYLTRANSFERASE from Arabidopsis thaliana (Mouse-ear cress) (347 aa), FASTA scores: opt: 312, E(): 3.8e-12, (41.85% identity in 313 aa overlap); etc. Identical to AAK46833|MT2533 HOMOCYSTEINE S-METHYLTRANSFERASE from Mycobacterium tuberculosis strain CDC1551 (302 aa). PROBABLE HOMOCYSTEINE S-METHYLTRANSFERASE MMUM (S-METHYLMETHIONINE:HOMOCYSTEINE METHYLTRANSFERASE) (CYSTEINE METHYLTRANSFERASE)	Molecular Function: homocysteine S-methyltransferase activity (GO:0008898) Homocysteine S-methyltransferase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark homocysteine S-methyltransferase	homocysteine S-methyltransferase	Putative uncharacterized protein gbs1377	Homocysteine S-methyltransferase	identified by match to PFAM protein family HMM PF02574 homocysteine S-methyltransferase MmuM, putative	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative homocysteine S-methyltransferase family protein	
ECOLI00251	Fe(3+) ions import ATP-binding protein fbpC	Sulfate transport system ATP-binding protein	ABC transporter:AAA ATPase	ABC-transporter ATP-binding protein	Sugar ABC transporter ATP binding protein	Fe(3+) ions import ATP-binding protein fbpC	Related to ABC transporter, ATP-binding protein	putative iron(III) ABC transporter, ATP-binding protein	similar to GP:15140222; identified by sequence similarity; putative ABC transporter, ATP-binding protein	Fe(3+) ions import ATP-binding protein fbpC	Probable ABC transporter, ATP-binding protein	Fe(3+) ions import ATP-binding protein fbpC 1	Probable ABC transporter, ATP-binding protein	Fe(3+) ions import ATP-binding protein fbpC	Putative ABC transport system ATP-binding protein	Fe(3+) ions import ATP-binding protein fbpC	Fe(3+) ions import ATP-binding protein fbpC	Iron(III) ABC transporter	spermidine/putrescine ABC transporter ATP-binding protein	ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems, ATPase component MalK protein	ABC transporter, ATPase subunit	ABC transporter related	ABC transporter, ATP-binding protein identified by similarity to SP:P31134; match to protein family HMM PF00005	ABC transporter component	ATPase	Spermidine/putrescine ABC transporter, ATP-binding protein	ABC transporter related	Fe(3+) ABC transporter, iron-binding protein	ABC transporter, ATP binding component, possibly iron transporter COG3842 ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	
ECOLI00252	Putative ferric transport system permease protein fbpB	Iron ABC transporter, permease protein	
ECOLI00262	Insertion element IS1 2/3 protein insB	Hypothetical protein	IPR005063: transposase transposition protein	Putative IS1 transposase	

ECOLI00253	pseudo	pseudo	Transposase	Residues 1 to 94 of 94 are 91 pct identical to residues 1 to 94 of a 94 aa protein from Pantoea agglomerans gb: AAG53987.1 putative transposase A	Putative transposase-related protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ISxac3 transposase	similar to Salmonella typhimurium putative transposase putative transposase	ISxac3 transposase	Transposase family protein	Transposon related ORF, HTH transcriptional regulator	Putative transposase	identified by match to protein family HMM PF01527; match to protein family HMM TIGR01199 transposase family protein	Transposase IS3/IS911	Transposase and inactivated derivatives	ISxac3 transposase (fragment)	transposase-like	hypothetical protein similarity to COG2963 Transposase	transposase IS3/IS911	Transposase	Transposase	Transposase IS3/IS911 family protein	Transposase	transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein KEGG: sfx:S4629 ISEhe3 orfA	putative transposase, IS3 family (orf 1) Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	Hypothetical protein	transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein KEGG: pen:PSEEN3943 transposase, IS3 family (orf 1)	transposase, putative KEGG: abo:ABO_2082 transposase, putative	Transposase IS3/IS911 family protein	
ECOLI00254	Putative uncharacterized protein yagB	CP4-6 prophage; conserved protein	
ECOLI00255	Uncharacterized protein yagA	Putative IS481 family ISAni1-like transposase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSPOSASE PROTEIN	Possible transposase	Transposase, undefined	SCD31.23, probable insertion element IS1652 transposase, len: 339 aa; identical to TR:CAB71807 (EMBL:AL138662) Streptomyces coelicolor putative transposase SC8E4A.02, 339 aa and highly similar to various other Streptomyces coelicolor transposases putative insertion element IS1652 transposase	Integrase, catalytic region	Integrase, catalytic region PFAM: Integrase, catalytic region KEGG: sme:SMb20905 putative transposase protein	Putative transposase integrase	Putative transposase; putative insertion element	Transposase	Transposase	Integrase, catalytic region	KEGG: lpf:lpl0800 hypothetical protein conserved hypothetical protein	Transposase	CP4-6 prophage; predicted DNA-binding transcriptional regulator	Integrase catalytic region	Integrase catalytic region	Putative uncharacterized protein	Integrase catalytic region	Transposase, putative	Transposase for insertion sequence	Transposase	Transposase /integrase family protein	Putative transposase	Transposase	Integrase family protein	Integrase catalytic region	Transposase	
ECOLI00256	Uncharacterized protein yagE	hypothetical dihydrodipicolinate synthase	Dihydrodipicolinate synthase/N-acetylneuraminate lyase DapA protein	dihydrodipicolinate synthase	dihydrodipicolinate synthase-like, mitochondrial [Source:HGNC Symbol;Acc:25155]	putative dihydrodipicolinate synthase similarity:fasta; with=UniProt:DAPA_BACSU (EMBL:BSSPOVFAB); Bacillus subtilis.; dapA; Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS) (Vegetative protein 81) (VEG81).; length=290; id 32.180; 289 aa overlap; query 5-290; subject 3-290 similarity:fasta; with=UniProt:Q89Q28_BRAJA (EMBL:BA000040); Bradyrhizobium japonicum.; Dihydrodipicolinate synthase (EC 4.2.1.52).; length=301; id 75.254; 295 aa overlap; query 3-296; subject 2-296	dihydrodipicolinate synthetase	transcript_id=ENSOGAT00000008787	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase-like, mitochondrial Precursor (DHDPS-like protein)(EC 4.-.-.-) [Source:UniProtKB/Swiss-Prot;Acc:Q86XE5]	Dihydrodipicolinate synthase	hypothetical protein	Dihydrodipicolinate synthase	transcript_id=ENSMICT00000007698	Dihydrodipicolinate synthetase	Dihydrodipicolinate synthetase	CP4-6 prophage; predicted lyase/synthase	jgi|Lacbi1|189233|estExt_GeneWisePlus_worm.C_50514	Dihydrodipicolinate synthetase	transcript_id=ENSTTRT00000009896	transcript_id=ENSPVAT00000003381	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase-like, mitochondrial Precursor (DHDPS-like protein)(EC 4.-.-.-) [Source:UniProtKB/Swiss-Prot;Acc:Q86XE5]	
ECOLI00257	Uncharacterized protein yagF	dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase KEGG: bcl:ABC1110 hypothetical protein	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	CP4-6 prophage; predicted dehydratase	Dihydroxy-acid dehydratase	Dehydratase, YjhG/YagF family	
ECOLI00258	Uncharacterized symporter yagG	Putative GPH family sugar transporter	Probable sugar transport protein	Putative membrane protein	putative permease	Sugar:proton symporter	Na+/galactoside symporter	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark transport protein	Transport protein	Na+/melibiose symporter and related transporters MelB protein	transport protein	identified by match to protein family HMM PF07690; match to protein family HMM TIGR00792 sugar:cation symporter family protein	glycoside-pentoside-hexuronide:cation symporter family protein	sodium:glactoside symporter family protein identified by match to protein family HMM PF07690; match to protein family HMM TIGR00792	transport protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family identified by match to protein family HMM PF07690; match to protein family HMM TIGR00792	transcript_id=ENSFCAT00000009861	sugar (Glycoside-Pentoside-Hexuronide) transporter TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter KEGG: xcv:XCV4363 glycoside-pentoside-hexuronide:cation symporter family protein	XylP protein	Na+/galactoside symporter	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Glycoside-pentoside-hexuronide:cation symporter	CP4-6 prophage; predicted sugar transporter	Putative uncharacterized protein	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Sodium:galactoside symporter family protein, putative precursor	Transport protein	transcript_id=ENSPVAT00000011341	
ECOLI00259	Putative beta-xylosidase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE BETA-XYLOSIDASE PROTEIN	CDS_ID OB3125; beta-xylosidase xylan 1,4-beta-xylosidase	Beta-xylosidase, family 43 glycosyl hydrolase	Xylan beta-1,4-xylosidase	Beta-xylosidase protein	beta xylosidase xylan 1,4-beta-xylosidase	putative glycosyl hydrolase similarity:fasta; with=UniProt:Q68HB3_BACST (EMBL:AY690618); Bacillus stearothermophilus.; xynB3; Beta-D-xylosidase.; length=535; id 48.998; 549 aa overlap; query 2-537; subject 4-535 similarity:fasta; with=UniProt:Q93E12_RHILT (EMBL:AF372655); Rhizobium leguminosarum (biovar trifolii).; xynA; XynA.; length=537; id 100.000; 537 aa overlap; query 1-537; subject 1-537	beta-xylosidase protein similar to XynA [Rhizobium leguminosarum bv.  trifolii] and SMc04247 [Sinorhizobium meliloti] Similar to entrez-protein:AAL14914.1 Putative location:bacterial cytoplasm Psort-Score: 0.3671	Alpha-N-arabinofuranosidase PFAM: glycoside hydrolase, family 43 KEGG: ccr:CC0989 xylan 1,4-beta-xylosidase	Xylan 1,4-beta-xylosidase	Magnaporthe grisea xylan 1,4-beta-xylosidase, putative	hypothetical protein	Alpha-N-arabinofuranosidase	Alpha-N-arabinofuranosidase	Alpha-N-arabinofuranosidase	Alpha-N-arabinofuranosidase	XynB	Glycoside hydrolase family 43	CP4-6 prophage; predicted xylosidase/arabinosidase	Alpha-N-arabinofuranosidase	Xylan 1,4-beta-xylosidase	Alpha-N-arabinofuranosidase	Beta-xylosidase protein	Xylan 1,4-beta-xylosidase	Alpha-N-arabinofuranosidase	Beta-xylosidase/alpha-L-arabinofuranosidase	Xylan 1,4-beta-xylosidase	Xylan 1,4-beta-xylosidase	
ECOLI00260	Uncharacterized HTH-type transcriptional regulator yagI	Putative IclR-family regulatory protein	Putative transcriptional regulator	Transcriptional regulator	identified by match to protein family HMM PF01614 transcriptional regulator, IclR family	transcriptional regulator, IclR family	Transcriptional regulator, IclR family	transcriptional regulator, IclR family PFAM: regulatory proteins, IclR KEGG: ppr:PBPRB1669 hypothetical transcriptional regulator	Transcriptional regulator, TrmB	Transcriptional regulator IclR-like protein	Regulatory protein, IclR	Transcriptional regulator IclR	Transcriptional regulator, IclR family	pseudo	Transcriptional regulator, IclR family	transcriptional regulator, IclR family PFAM: regulatory protein IclR; Transcriptional regulator IclR KEGG: rrs:RoseRS_2571 regulatory protein, IclR	Putative TRANSCRIPTIONal REGULATOR, IclR family	IclR-type transcriptional regulator	Transcriptional regulator, IclR family	Transcriptional regulator, IclR family	Transcriptional regulator, IclR family	
ECOLI00261	Ornithine carbamoyltransferase chain F	Ornithine carbamoyltransferase, catabolic	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Similar to Pseudomonas aeruginosa ornithine carbamoyltransferase, anabolic ArgF or pa3537 SWALL:OTCA_PSEAE (SWALL:P11724) (304 aa) fasta scores: E(): 1.9e-09, 25.46% id in 326 aa, and to Bacteroides thetaiotaomicron ornithine carbamoyltransferase BT3717 SWALL:Q8A1E9 (EMBL:AE016941) (318 aa) fasta scores: E(): 3.8e-121, 93.37% id in 317 aa, and to Bacteroides forsythus transcarbamylase SWALL:AAO33834 (EMBL:AY184490) (177 aa) fasta scores: E(): 6.9e-48, 76.1% id in 159 aa putative ornithine carbamoyltransferase	ornithine carbamoyltransferase, catabolic	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	CP4-6 prophage; ornithine carbamoyltransferase 2, chain F	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase, catabolic	Ornithine carbamoyltransferase	ornithine carbamoyltransferase TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: bcb:BCB4264_A0421 ornithine carbamoyltransferase	
ECOLI00262	Insertion element IS1 2/3 protein insB	Hypothetical protein	IPR005063: transposase transposition protein	Putative IS1 transposase	

ECOLI00263	Uncharacterized protein yagJ	
ECOLI00264	Uncharacterized protein yagK	Putative uncharacterized protein yagK	conserved hypothetical protein KEGG: son:SO1443 hypothetical protein	KEGG: slo:Shew_1252 transposase transposase	CP4-6 prophage; conserved protein	Putative uncharacterized protein	
ECOLI00265	Uncharacterized protein yagL	
ECOLI00266	Uncharacterized protein yagM	Residues 9 to 163 of 263 are 100 pct identical to residues 1 to 155 of a 156 aa protein from Shigella flexneri 2a gb: AAK00470.1 orf, partial conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	CP4-6 prophage; predicted protein	

ECOLI00267	Uncharacterized protein yagN	
ECOLI00268	Putative prophage CP4-6 integrase	Related to integrase	Phage integrase	Similar to phage-related integrase proteins hypothetical protein	Phage-related integrase	phage-related integrase	Phage integrase	Phage integrase	Phage integrase	phage integrase	phage integrase family protein PFAM: phage integrase family protein KEGG: bcn:Bcen_0845 phage integrase	phage integrase family protein PFAM: phage integrase family protein KEGG: eba:ebA751 phage integrase	Phage integrase	CP4-6 prophage; phage integrase	phage integrase family protein PFAM: phage integrase family protein KEGG: bcn:Bcen_0845 phage integrase	Phage related integrase	Phage integrase family protein	CP4-6 prophage; predicted phage integrase	Integrase	Putative integrase from bacteriophage	Phage integrase family protein	Integrase family protein	Integrase family protein	Possible phage integrase	Phage-related integrase	Integrase family protein	Integrase family protein	Integrase family protein	
ECOLI00269	Uncharacterized protein yagP	putative transcription regulator protein	Predicted transcriptional regulator	Putative uncharacterized protein	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	YagP protein	putative transcriptional regulator LYSR-type	Predicted transcriptional regulator	
ECOLI00270	Uncharacterized protein yagQ	Putative xanthine dehydrogenase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Xanthine dehydrogenase accessory factor XdhC, putative	Putative uncharacterized protein	Lipoprotein, putative	Putative uncharacterized protein yagQ	SC6C5.10, conserved hypothetical protein, len: 395 aa; similar to many eg. TR:O53711 (EMBL:AL021931) hypothetical protein from Mycobacterium tuberculosis (380 aa) fasta scores; opt: 1247, z-score: 1422.8, E(): 0, (56.7% identity in 372 aa overlap). hypothetical protein SC6C5.10	identified by match to protein family HMM PF02625 XdhC/CoxI family protein	Probable xanthine dehydrogenase accessory factor	Putative uncharacterized protein	Mb0383c, -, len: 380 aa. Equivalent to Rv0376c, len: 380 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 380 aa overlap). Conserved hypothetical protein, highly similar to T35481|4008539|CAA22508.1|AL034492|SC6C5.10 hypothetical protein from Streptomyces coelicolor (395 aa); and AAK64260.1|AF373840_20 ORF377 hypothetical CoxI from Arthrobacter nicotinovorans (377 aa). And similar to other conserved hypothetical proteins e.g.  NP_101963.1|14021136|BAB47749.1|AP002994 hypothetical protein from Mesorhizobium loti (245 aa). Note that C-terminus shows similarity with C-termini of CAB76248.1|X82447|COXF CoxF protein from Pseudomonas/Oligotropha carboxidovorans (280 aa); CAB76250.1|X82447|COXI CoxI protein from Pseudomonas/Oligotropha carboxidovorans (330 aa); and AJ224684|BJAJ4684_6 cooxS from Bradyrhizobium japonicum (176 aa), FASTA scores: E(): 1.9e-17, (47.1% identity in 138 aa overlap). Also some partial similarity with AJ224684|BJAJ4684_5 cooxS from Bradyrhizobium japonicum (107 aa), FASTA scores: opt: 321, E(): 4.2e-14, (53.3% identity in 92 aa overlap); E1184330|Z99120|YURF YURF PROTEIN from Bacillus subtilis (330 aa), FASTA scores: opt: 170, E(): 2.9e- 16, (27.5% identity in 345 aa overlap). Also similar to downstream ORF Rv0372c from Mycobacterium tuberculosis (251 aa), FASTA scores: E(): 2.1e-06, (30.7% identity in 277 aa overlap). CONSERVED HYPOTHETICAL PROTEIN	Xanthine dehydrogenase accessory factor, putative	conserved hypothetical protein	conserved hypothetical protein	identified by match to protein family HMM PF02625 xanthine dehydrogenase accessory factor, putative	identified by match to protein family HMM PF02625 XdhC/CoxI family protein	Protein of unknown function DUF182	Protein of unknown function DUF182	protein of unknown function DUF182	conserved hypothetical protein	protein of unknown function DUF182	protein of unknown function DUF182	protein of unknown function DUF182	CO dehydrogenase maturation factor Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family; COG1975	conserved hypothetical protein similarity:fasta; SWALL:Q8UJI0 (EMBL:AE008970); Agrobacterium tumefaciens; hypothetical protein atu5497; length 329 aa; id=54.54; ungapped id=54.73; E()=2.6e-51; 297 aa overlap; query 9-304 aa; subject 26-322 aa	
ECOLI00271	Putative xanthine dehydrogenase yagR molybdenum- binding subunit	Oxidoreductase	glimmer prediction; very similar to E. coli probable oxidoreductase (theoretical) YagR, P77489.  Aldehyde oxidase and xanthine  family. Possibly one of three subunits of  (SMA2349, SMA2351, SMA2353) probable oxidoreductase	Putative xanthine dehydrogenase yagR molybdenum- binding subunit	Xanthine dehydrogenase protein	Oxidoreductase	oxidoreductase	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead:Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding	BELONGS TO THE XANTHINE DEHYDROGENASE FAMILY.99.7% aligned to CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]. Putative xanthine dehydrogenase	aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding	Xanthine dehydrogenase	Xanthine dehydrogenase	Aldehyde oxidase	putative xanthine dehydrogenase YagR, molybdenum binding subunit similarity:fasta; SWALL:YAGR_ECOLI (SWALL:P77489); Escherichia coli; putative xanthine dehydrogenase YagR,molybdenum binding subunit; yagR; length 732 aa; id=68.71; ungapped id=68.9; E()=3.6e-194; 732 aa overlap; query 1-731 aa; subject 1-731 aa similarity:fasta; SWALL:Q92XH9 (EMBL:AE007312); Rhizobium meliloti; probable oxidoreductase; length 733 aa; id=79.97; ungapped id=80.41; E()=0; 734 aa overlap; query 1-732 aa; subject 2-733 aa	putative xanthine dehydrogenase molybdenum binding subunit	Putative xanthine dehydrogenase, molybdenum- binding subunit	aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding KEGG: rpc:RPC_1131 xanthine dehydrogenase	aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding KEGG: shm:Shewmr7_1505 twin-arginine translocation pathway signal	aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding KEGG: rsp:RSP_3206 putative xanthine dehydrogenase	Putative xanthine dehydrogenase, molybdenum binding subunit	Putative oxidoreductase	Xanthine dehydrogenase, molybdenum binding subunit apoprotein	Putative uncharacterized protein	Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding	Xanthine dehydrogenase family protein, molybdopterin-binding subunit	Putative xanthine dehydrogenase molybdenum binding subunit	Putative xanthine dehydrogenase YagR, molybdenum binding subunit	Predicted oxidoreductase with molybdenum-binding domain	Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding	
ECOLI00272	Putative xanthine dehydrogenase yagS FAD-binding subunit	Oxidoreductase	Probable oxidoreductase	glimmer prediction; very similar to E. coli YagS, a hypothetical protein, P77324; may be one of three subunits of  (SMA2349, SMA2351, SMA2353) possible oxidoreductase, molybdopterin-binding subunit	Oxidoreductase, molybdopterin-binding subunit	Putative xanthine dehydrogenase yagS FAD-binding subunit	Oxidoreductase, molybdopterin-binding subunit	Oxidoreductase	oxidoreductase	molybdopterin dehydrogenase, FAD-binding	molybdopterin dehydrogenase, FAD-binding	Molybdopterin dehydrogenase, FAD-binding	putative xanthine dehydrogenase YagS, fad binding subunit similarity:fasta; SWALL:YAGS_ECOLI (SWALL:P77324); Escherichia coli; putative xanthine dehydrogenase YagS,fad binding subunit; yagS; length 318 aa; id=75.55; ungapped id=75.55; E()=3.8e-91; 315 aa overlap; query 1-315 aa; subject 1-315 aa similarity:fasta; SWALL:Q92XI0 (EMBL:AE007312); Rhizobium meliloti; possible oxidoreductase,molybdopterin-binding subunit; length 316 aa; id=79.11; ungapped id=79.11; E()=2.1e-96; 316 aa overlap; query 1-316 aa; subject 1-316 aa	putative xanthine dehydrogenase FAD binding subunit	molybdopterin dehydrogenase, FAD-binding	Putative xanthine dehydrogenase, FAD-binding subunit	molybdopterin dehydrogenase, FAD-binding PFAM: molybdopterin dehydrogenase, FAD-binding KEGG: xac:XAC2894 oxidoreductase	Molybdopterin dehydrogenase, FAD-binding	Putative oxidoreductase, molybopterin binding subunit	FAD-binding molybdopterin dehydrogenase	Putative xanthine dehydrogenase, FAD binding subunit	molybdopterin dehydrogenase, FAD-binding PFAM: molybdopterin dehydrogenase, FAD-binding KEGG: bja:blr2218 putative xanthine dehydrogenase	Putative oxidoreductase	Molybdopterin dehydrogenase, FAD-binding	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead	FAD binding domain in molybdopterin dehydrogenase	Xanthine dehydrogenase	Molybdopterin dehydrogenase FAD-binding	Putative xanthine dehydrogenase FAD binding subunit	
ECOLI00273	Putative xanthine dehydrogenase yagT iron-sulfur- binding subunit	Oxidoreductase, iron-sulfur subunit	Quinoline 2-oxidoreductase	4Fe-4S binding domain protein	Putative xanthine dehydrogenase yagT iron-sulfur- binding subunit	Iron-sulfur cluster-binding protein	Xanthine dehydrogenase protein, iron-sulfur- binding subunit	Oxidoreductase	oxidoreductase	identified by match to protein family HMM PF00111; match to protein family HMM PF01799; match to protein family HMM TIGR01409 oxidoreductase, iron-sulfur binding subunit, putative	Twin-arginine translocation pathway signal	Twin-arginine translocation pathway signal	similar to CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]. putative Oxidoreductase	(2Fe-2S)-binding	Twin-arginine translocation pathway signal	Twin-arginine translocation pathway signal	Ferredoxin	putative xanthine dehydrogenase YagT iron-sulfur binding subunit similarity:fasta; SWALL:YAGT_ECOLI (SWALL:P77165); Escherichia coli; putative xanthine dehydrogenase YagT iron-sulfur binding subunit; yagT; length 229 aa; id=67.47; ungapped id=69.15; E()=2.2e-49; 206 aa overlap; query 11-212 aa; subject 21-225 aa similarity:fasta; SWALL:Q92XI1 (EMBL:AE007312); Rhizobium meliloti; probable oxidoreductase; length 215 aa; id=73.95; ungapped id=73.95; E()=2.1e-61; 215 aa overlap; query 1-215 aa; subject 1-215 aa	(2Fe-2S)-binding	putative xanthine dehydrogenase iron-sulfur binding subunit	2Fe-2S protein	(2Fe-2S)-binding	(2Fe-2S)-binding protein	Twin-arginine translocation pathway signal	Putative xanthine dehydrogenase, iron-sulfur binding subunit	ferredoxin; (2Fe-2S)-binding domain protein TIGRFAM: Twin-arginine translocation pathway signal PFAM: ferredoxin; [2Fe-2S]-binding domain protein KEGG: reu:Reut_B4505 twin-arginine translocation pathway signal	(2Fe-2S)-binding domain protein PFAM: ferredoxin; [2Fe-2S]-binding domain protein KEGG: bcn:Bcen_2341 (2Fe-2S)-binding	(2Fe-2S)-binding domain protein PFAM: ferredoxin; [2Fe-2S]-binding domain protein KEGG: ava:Ava_C0128 ferredoxin	carbon monoxyde dehydrogenase (small chain), CoxS_1 cytoplasmic protein involved in cellular metabolism [catalytic activity: CO + H(2)O + acceptor = CO(2) + reduced acceptor]	
ECOLI00274	Inner membrane protein yagU	Hypothetical protein yagU	Putative membrane protein	Putative uncharacterized protein	Conserved protein	Inner membrane protein yagU	Putative membrane protein	Putative uncharacterized protein	Integral membrane protein	identified by similarity to OMNI:NTL01SA0184 conserved hypothetical protein	Hypothetical protein SE0576	Putative uncharacterized protein yreD	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0182 putative membrane protein	conserved hypothetical protein	Predicted periplasmic/secreted protein Hypothetical protein	identified by similarity to GB:AAO54386.1; match to protein family HMM PF07274 conserved hypothetical protein	Protein of unknown function DUF1440	Similar to Lactococcus lactis hypothetical protein YreD TR:Q9CEZ2 (EMBL:AE006399) (178 aa) fasta scores: E(): 6.7e-30, 47.771% id in 157 aa, and to Campylobacter jejuni putative integral membrane protein CJ0014C TR:Q9PJ97 (EMBL:AL139074) (174 aa) fasta scores: E(): 8.7e-24, 42.424% id in 165 aa putative membrane protein	identified by match to protein family HMM PF07274 conserved hypothetical protein	similar to gi|23003157|ref|ZP_00046825.1| [Lactobacillus gasseri], percent identity 41 in 150 aa, BLASTP E(): 7e-31 putative periplasmic secreted protein	conserved hypothetical protein identified by match to protein family HMM PF07274	Conserved hypothetical membrane protein COG3471 [S] Predicted periplasmic/secreted protein	Putative integral membrane protein	Putative membrane protein	conserved hypothetical protein	Putative uncharacterized protein yagU	Predicted periplasmic/secreted protein	Predicted periplasmic/secreted protein	
ECOLI00276	Uncharacterized protein yagV	Putative uncharacterized protein yagV	Putative uncharacterized protein	Putative uncharacterized protein yagV	conserved hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein yagV	Putative uncharacterized protein	Putative uncharacterized protein precursor	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative fimbrial protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yagV	Putative uncharacterized protein yagV	Putative uncharacterized protein yagV	Putative uncharacterized protein yagV	Predicted chaperone	Putative uncharacterized protein yagV	YagV protein	Predicted chaperone	conserved chaperone	Putative uncharacterized protein	Putative fimbrial protein	
ECOLI00277	Uncharacterized protein yagW	Putative receptor	Putative uncharacterized protein	Putative uncharacterized protein yagW	conserved hypothetical protein	conserved hypothetical protein	Putative receptor	Putative uncharacterized protein	Putative receptor precursor	Predicted receptor	Putative receptor precursor	Putative uncharacterized protein	Putative fimbrial protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative surface or exported protein	Putative surface or exported protein	Putative surface or exported protein	pseudo	Putative surface or exported protein	Predicted protein	Putative surface or exported protein	YagW protein	Predicted receptor	hypothetical protein	Predicted receptor	Putative fimbrial protein	
ECOLI00278	Uncharacterized protein yagX	Putative uncharacterized protein	Putative enzyme	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yagX	conserved hypothetical protein	conserved hypothetical protein; putative signal peptide Evidence 4 : Homologs of previously reported genes of unknown function	hypothetical protein KEGG: ssn:SSO_3248 outer membrane fimbrial user protein	hypothetical protein YagX precursor	Putative uncharacterized protein precursor	Putative enzyme	Putative uncharacterized protein	Putative enzyme precursor	Predicted aromatic compound dioxygenase	Putative uncharacterized protein precursor	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yagX	Putative uncharacterized protein yagX	Putative uncharacterized protein yagX	Putative uncharacterized protein yagX	Putative uncharacterized protein yagX	Predicted outer membrane usher protein	Putative uncharacterized protein yagX	YagX protein	
ECOLI00279	Uncharacterized protein matC	Uncharacterized protein matC	conserved hypothetical protein	Uncharacterized protein matC	Uncharacterized protein matC	conserved hypothetical protein	Hypothetical protein yagY precursor	Putative uncharacterized protein yagY	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative fimbrial protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yagY	Uncharacterized protein matC	Uncharacterized protein matC	Putative uncharacterized protein yagY	Uncharacterized protein matC	Predicted chaperone	Putative uncharacterized protein yagY	YagY protein	Predicted chaperone	predicted chaperone	Putative uncharacterized protein	Putative fimbrial protein	
ECOLI00280	Uncharacterized protein matB	Fimbrillin matB homolog	conserved hypothetical protein	Fimbrillin matB homolog	Fimbrillin matB homolog	fimbrillin MatB identified by similarity to GB:AAK01671.1	MatB protein	Hypothetical protein yagZ precursor	Putative uncharacterized protein yagZ	Fimbrillin MatB	Putative uncharacterized protein precursor	Mat fimbrillin	Putative uncharacterized protein precursor	Fimbrillin MatB	Putative fimbrial protein	Fimbrillin MatB	Fimbrillin MatB	Putative uncharacterized protein	E. coli common pilus	pseudo	E. coli common pilus	Fimbrillin matB homolog	E. coli common pilus	Fimbrillin	E. coli common pilus	pseudo	Mat fimbrillin	predicted fimbrillin precursor	Putative uncharacterized protein	
ECOLI00281	Putative HTH-type transcriptional regulator ykgK	Probable HTH-type transcriptional regulator matA homolog	Code: K; COG: COG2771 putative regulator	Probable HTH-type transcriptional regulator matA homolog	Probable HTH-type transcriptional regulator matA homolog	conserved hypothetical protein	Putative regulator	Fimbrillin MatA	Predicted regulator	Fimbrillin MatA	Transcriptional regulator, LuxR family	Fimbrillin MatA	Putative transcriptional regulator MatA	Fimbrillin MatA	Putative regulator	Probable HTH-type transcriptional regulator matA homolog	Putative transcriptional regulator	Probable HTH-type transcriptional regulator matA homolog	Probable HTH-type transcriptional regulator matA homolog	Putative transcriptional regulator	Predicted regulator	Putative transcriptional regulator	YkgK protein	Predicted regulator	predicted regulator	Transcriptional regulator, LuxR family	
ECOLI00284	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	similar to GB:X66113, SP:Q01780,  and PID:35555; identified by sequence similarity; putative ribosomal protein L31	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105 ribosomal protein L31	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	50S ribosomal protein L31 type B	
ECOLI00286	Putative attaching and effacing protein homolog	Attaching and effacing protein, pathogenesis factor	pseudo	EaeH protein	pseudo predicted adhesin, partial	Attaching and effacing protein, pathogenesis factor	

ECOLI00287	Putative HTH-type transcriptional regulator ykgA	Hypothetical transcriptional regulator ykgA	Putative AraC-like transcriptional regulator	IPR000005: Helix-turn-helix, AraC type putative bacterial regulatory helix-turn-helix proteins, araC family	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Putative bacterial regulatory helix-turn-helix protein, araC family	Putative bacterial regulatory helix-turn-helix proteins, AraC family	Hypothetical transcriptional regulator YkgA	putative transcriptional regulator	Transcriptional regulator, AraC family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Putative uncharacterized protein	Putative HTH-type transcriptional regulator YkgA	Putative transcriptional regulator	Putative regulatory protein	Putative regulatory protein	Putative transcriptional regulator	Putative regulatory protein	Transcriptional regulator, AraC family	Putative regulatory protein	Putative transcriptional regulator	Putative transcription regulator	Putatve transcriptional regulator ykgA	Putatve transcriptional regulator ykgA	Putatve transcriptional regulator ykgA	Putatve transcriptional regulator ykgA	

ECOLI00289	Inner membrane protein ykgB	Putative transmembrane protein	Predicted membrane protein	Putative membrane protein	Putative uncharacterized protein	Hypothetical protein ykgB	Putative uncharacterized protein	Putative uncharacterized protein ykgB	Predicted membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative	Similar to: HI0219, YKGB_HAEIN conserved hypothetical protein	Similar to Bacteroides thetaiotaomicron conserved hypothetical protein BT1541 SWALL:Q8A7I3 (EMBL:AE016932) (193 aa) fasta scores: E(): 5.5e-68, 90.67% id in 193 aa, and to Escherichia coli O6 hypothetical protein Ykgb Ykgb or C0418 SWALL:Q8FKK0 (EMBL:AE016756) (200 aa) fasta scores: E(): 1.1e-30, 51.07% id in 186 aa, and to Salmonella typhimurium putative inner membrane protein STM0566 SWALL:Q8ZR55 (EMBL:AE008722) (186 aa) fasta scores: E(): 1.4e-30, 50.27% id in 185 aa putative transmembrane protein	Putative inner membrane protein	Code: S; COG: COG3059 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative membrane protein	protein of unknown function DUF417	Putative membrane protein	hypothetical protein	Putative uncharacterized protein ykgB	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein similar to HP0565 High confidence in function and specificity	conserved hypothetical protein identified by match to protein family HMM PF04224	protein of unknown function DUF417 PFAM: protein of unknown function DUF417 KEGG: aba:Acid345_3718 protein of unknown function DUF417	conserved hypothetical protein identified by similarity to GB:AAN78899.1; match to protein family HMM PF04224	protein of unknown function DUF417 PFAM: protein of unknown function DUF417 KEGG: pha:PSHAb0032 hypothetical protein	putative membrane protein	
ECOLI00290	UPF0379 protein ykgI	Hypothetical protein ykgI	Putative uncharacterized protein ykgI	putative periplasmic protein	similar to Salmonella typhi CT18 hypothetical secreted protein hypothetical secreted protein	Putative periplasmic protein	conserved hypothetical protein	Hypothetical secreted protein	Putative uncharacterized protein ykgI	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical secreted protein	Conserved domain protein	Conserved domain protein	Conserved domain protein	Hypothetical secreted protein	Conserved domain protein	Putative uncharacterized protein	Conserved domain protein	Hypothetical secreted protein	Putative uncharacterized protein	Putative uncharacterized protein ykgI	Putative uncharacterized protein ykgI	Putative uncharacterized protein ykgI	Putative uncharacterized protein ykgI	Putative uncharacterized protein ykgI	
ECOLI00291	Probable pyridine nucleotide-disulfide oxidoreductase ykgC	Putative pyridine nucleotide-disulfide oxidoreductase	Pyridine nucleotide-disulphide oxidoreductase	Probable pyridine nucleotide-disulfide oxidoreductase	Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes	Putative pyridine nucleotide-disulfide oxidoreductase	Putative pyridine nucleotide-disulphide oxidoreductase	Probable pyridine nucleotide-disulfide oxidoreductase ykgC	Product confidence : putative Gene name confidence : putative putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase, similar to mercuric reductases protein	Pyridine nucleotide-disulphide oxidoreductase	Putative oxidoreductase	Mercuric reductase homologue	Putative pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes oxidoreductase protein	similar to oxydoreductase hypothetical protein	conserved gene pyridine nucleotide-disulfide oxidoreductase	similar to oxydoreductase hypothetical protein	identified by match to protein family HMM PF00070; match to protein family HMM PF02852 pyridine nucleotide-disulfide oxidoreductase family protein	oxidoreductase, pyridine nucleotide-disulfide	Mercuric reductase-like protein	Lpd	COG1249 Pyruvate-2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component pyridine mercuric reductase	Pyridine nucleotide-disulfide oxidoreductase	IPR000103: Pyridine nucleotide-disulphide oxidoreductase, class-II; IPR000815: Mercuric reductase; IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I;IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase putative oxidoreductase	similar to Salmonella typhi CT18 probable pyridine nucleotide-disulfide oxidoreductase probable pyridine nucleotide-disulfide oxidoreductase	mercuric reductase homologue	Ortholog of S. aureus MRSA252 (BX571856) SAR0600 pyridine nucleotide-disulphide oxidoreductase protein	mercuric reductase homologue	Putative Oxidoreductase (Mercury (II) reductase)	Similar to Bacteroides thetaiotaomicron putative pyridine nucleotide-disulfide oxidoreductase BT1542 SWALL:AAO76649 (EMBL:AE016932) (457 aa) fasta scores: E(): 4.8e-121, 70.45% id in 457 aa, and to Escherichia coli probable pyridine nucleotide-disulfide oxidoreductase YkgC or B0304 SWALL:YKGC_ECOLI (SWALL:P77212) (441 aa) fasta scores: E(): 7.5e-66, 50.98% id in 457 aa, and to Escherichia coli O6 probable pyridine nucleotide-disulfide oxidoreductase YkgC or C0420 SWALL:Q8FKJ9 (EMBL:AE016756) (450 aa) fasta scores: E(): 7.6e-66, 51.2% id in 457 aa putative pyridine nucleotide-disulfide oxidoreductase	
ECOLI00292	Uncharacterized HTH-type transcriptional regulator ykgD	Hypothetical transcriptional regulator ykgD	Putative ARAC-type regulatory protein	probable transcriptional regulator	SC9B5.15, AraC-like transcriptional regulator, len: 313aa; similar to many members of the AraC family of transcriptional regulators eg. SW:MMSR_PSEAE mmsAB operon regulatory protein (307 aa) fasta scores; opt: 171, z-score: 257.7, E(): 4.6e-07, (34.6% identity in 78 aa overlap). Contains PS00041 Bacterial regulatory proteins, araC family signature and Pfam match to entry PF00165 HTH_2, Bacterial regulatory helix-turn-helix proteins, araC family. putative AraC-like transcriptional regulator	IPR000005: Helix-turn-helix, AraC type putative transcriptional regulator (AraC/XylS family)	similar to Salmonella typhi CT18 hypothetical araC-family transcriptional regulator hypothetical araC-family transcriptional regulator	Similar to: HI1052, YA52_HAEIN conserved hypothetical transcriptional regulator	Predicted regulatory protein containing AraC-type DNA-binding domain and DSBH domain	Putative transcriptional regulator	Helix-turn-helix, AraC type	Best Blastp Hit: gb|AAD44696.1|AF128630_1 (AF128630) MtrA [Neisseria gonorrhoeae] >gi|7228474|gb|AAF42471.1|AF133676_1 (AF133676) MtrA [Neisseria gonorrhoeae] COG2207 AraC-type DNA-binding domain-containing mtrCDE transcriptional regulator, activator	Code: K; COG: COG2207 putative ARAC-type regulatory protein	AraC-family transcriptional regulator	Transcriptional regulator, AraC family	Putative transcriptional regulator, AraC family protein	Transcriptional regulator, AraC family	histidine kinase	transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Hypothetical transcriptional regulator YkgD	transcriptional regulator, AraC family	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: bur:Bcep18194_A3879 transcriptional regulator, AraC family	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: ade:Adeh_2267 transcriptional regulator, AraC family	Helix-turn-helix-domain containing protein, AraC type	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: bcn:Bcen_0306 transcriptional regulator, AraC family	Transcriptional regulator, AraC family	transcriptional regulator, AraC family identified by match to protein family HMM PF00165	Transcriptional regulatory protein	

ECOLI00293	Uncharacterized protein ykgE	Oxidoreductase, putative glycolate oxidase	Putative fumarate reductase-related protein	Oxidoreductase, putative	Putative uncharacterized protein	Fumarate reductase-related protein	Putative uncharacterized protein	Lactate utilization protein A 1	Putative glycolate oxidase	Lactate utilization protein A	Lactate utilization protein A	Putative uncharacterized protein	putative dehydrogenase subunit	Hypothetical protein ykgE	identified by match to protein family HMM PF02754 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Glycolate oxidase	best DB hits: BLAST: pir:T36428; hypothetical protein SCF43A.05 - Streptomyces coelicolor; E=3e-48 ddbj:BAB05551.1; (AP001513) glycolate oxidase [Bacillus; E=1e-39 pir:H75337; fumarate reductase-related protein - Deinococcus; E=7e-39 COG: BH1832; COG0247 Fe-S oxidoreductases; E=1e-40 MJ0863; COG2048 Heterodisulfide reductase subunit B; E=1e-05 MJ0092_2; COG0247 Fe-S oxidoreductases; E=7e-05 PFAM: PF02754; Domain of unknown function (DUF224); E=9.2e-10 conserved hypothetical protein-putative Fe-S containing oxidoreductase	Oxidoreductase, putative	glycolate oxidase	Cysteine-rich domain protein	Conserved protein	Putative oxididoreductase subunit	Putative dehydrogenase subunit	CDS_ID OB0370 glycolate oxidase	Lactate utilization protein A	SCF43A.05, conserved hypothetical protein, len: 250 aa; unknown function, similar to other hypothetical proteins e.g. TR:O07020 (EMBL:Z94043) Bacillus subtilis hypothetical protein (238 aa), fasta scores; opt: 720 z-score: 887.0 E(): 0, 46.1% identity in 245 aa overlap.  Also similar to the C-terminal half of many Fe-S proteins e.g. SW:GLPC_ECOLI (EMBL:M20938), glpC, Escherichia coli anaerobic glycerol-3-phosphate dehydrogenase subunit C (396 aa) (26.7% identity in 255 aa overlap) conserved hypothetical protein	Residues 1 to 239 of 239 are 98 pct identical to residues 1 to 239 of a 239 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286032.1 putative dehydrogenase subunit	
ECOLI00294	Uncharacterized electron transport protein ykgF	Iron-sulfur protein	Putative electron transport protein	Putative iron-sulfur protein	Conserved iron-sulfur protein	hypothetical protein	Iron-sulfur cluster-binding protein	Iron-sulfur cluster binding protein	Putative uncharacterized protein	Putative iron-sulfur protein	Uncharacterized conserved protein containing a ferredoxin-like domain	Iron-sulfur cluster-binding protein	Lactate utilization protein B	Conserved hypothetical iron-sulfur protein	Putative electron transport protein	Lactate utilization protein B	Lactate utilization protein B	putative electron transport protein ykgF	Putative electron transport protein ykgF	identified by match to protein family HMM TIGR00273 iron-sulfur cluster-binding protein	Iron-sulfur cluster-binding protein	Iron-sulfur cluster-binding protein	Putative electron transport protein	Conserved hypothetical iron-sulphur protein	PMID: 97426617 PMID: 9278503 best DB hits: BLAST: swissprot:P77536; YKGF_ECOLI HYPOTHETICAL 53.1 KD PROTEIN IN; E=5e-89 gb:AAG54641.1; AE005208_9 (AE005208) orf, hypothetical protein; E=9e-89 pir:T36429; probable iron-sulfur protein SCF43A.06 [similarity] -; E=1e-86 COG: ykgF; COG1139 Uncharacterized conserved protein containing a; E=5e-90 AF0506; COG0247 Fe-S oxidoreductases; E=2e-05 PFAM: PF00037; 4Fe-4S binding domain; E=0.43 putative electron transport protein ykgF-putative 4Fe-4S containing oxidoreductase	Iron-sulfur cluster binding protein, putative	hypothetical conserved protein	Putative iron-sulfur protein	Putative iron-sulfur protein	
ECOLI00295	UPF0707 protein ykgG	YkgG family protein	Putative uncharacterized protein	Lactate utilization protein C	Lactate utilization protein C	Lactate utilization protein C	hypothetical ykgG family protein	Hypothetical protein ykgG	identified by match to protein family HMM PF02589 ykgG family protein	Putative uncharacterized protein	hypothetical conserved protein	Putative uncharacterized protein ykgG	CDS_ID OB0372 hypothetical protein	Lactate utilization protein C	Residues 1 to 231 of 231 are 99 pct identical to residues 1 to 231 of a 231 aa protein YKGG_ECOLI sp: P77433 orf, conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein yrjD	Uncharacterized ACR Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Protein of unknown function DUF162	Code: S; COG: COG1556 putative transporter	Putative uncharacterized protein	hypothetical protein similarity to COG1556 Uncharacterized ACR	Putative uncharacterized protein ykgG	Hypothetical protein	hypothetical protein	conserved hypothetical protein	Hypothetical protein	
ECOLI00297	Uncharacterized protein ykgH	Putative uncharacterized protein	Residues 1 to 222 of 222 are 97 pct identical to residues 1 to 222 of a 222 aa protein from Escherichia coli K12 ref: NP_414844.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ykgH	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ykgH	Putative uncharacterized protein	Putative uncharacterized protein ykgH	Putative uncharacterized protein ykgH	Putative uncharacterized protein ykgH	pseudo	Putative uncharacterized protein ykgH	YkgH protein	Predicted inner membrane protein	
ECOLI00298	Choline dehydrogenase	Choline dehydrogenase	Putative uncharacterized protein	Choline dehydrogenase	Choline dehydrogenase	similar to SP:P54223; identified by sequence similarity; putative choline dehydrogenase	Choline dehydrogenase	PMID: 92177421 best DB hits: BLAST: pir:C75453; GMC oxidoreductase - Deinococcus radiodurans (strain R1); E=9e-35 swissprot:Q00593; ALKJ_PSEOL ALCOHOL DEHYDROGENASE [ACCEPTOR]; E=3e-28 embl:CAB51051.1; (AJ233397) alcohol dehydrogenase [Pseudomonas; E=3e-25 COG: DR0965; COG2303 Choline dehydrogenase and related flavoproteins; E=9e-36 PFAM: PF01494; FAD binding domain; E=0.085 PF00732; GMC oxidoreductases; E=2.3e-09 PF01583; Adenylylsulfate kinase; E=0.85 GMC oxidoreductase	predicted by Codon_usage predicted by Homology predicted by FrameD CHOLINE DEHYDROGENASE CHD OXIDOREDUCTASE FLAVOPROTEIN FAD MEMBRANE	Choline dehydrogenase	Choline dehydrogenase	Choline dehydrogenase	Choline dehydrogenase	Choline dehydrogenase	Choline dehydrogenase	identified by similarity to EGAD:12485; match to protein family HMM PF00732; match to protein family HMM PF05199; match to protein family HMM TIGR01810 choline dehydrogenase	identified by similarity to SP:P54223; match to protein family HMM PF00732; match to protein family HMM PF05199; match to protein family HMM TIGR01810 choline dehydrogenase	Choline dehydrogenase	Putative uncharacterized protein	Choline dehydrogenase	choline dehydrogenase	Choline dehydrogenase	Ortholog of S. aureus MRSA252 (BX571856) SAR2690 putative choline dehydrogenase	choline dehydrogenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme choline dehydrogenase, a flavoprotein	choline dehydrogenase	Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH).,Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine (By similarity). choline dehydrogenase	choline dehydrogenase	identified by similarity to SP:P17444; match to protein family HMM PF00732; match to protein family HMM PF05199; match to protein family HMM TIGR01810 choline dehydrogenase	
ECOLI00299	Betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	putative betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	predicted by Codon_usage predicted by Homology predicted by FrameD BETAINE ALDEHYDE DEHYDROGENASE BADH OXIDOREDUCTASE NAD PROTEIN	Betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	identified by similarity to SP:P54222; match to protein family HMM PF00171; match to protein family HMM TIGR01804 betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase (BADH) protein	Betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme NAD+-dependent betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	betaine aldehyde dehydrogenase	identified by similarity to SP:P17445; match to protein family HMM PF00171; match to protein family HMM TIGR01804 betaine aldehyde dehydrogenase	identified by similarity to SP:P17445; match to protein family HMM PF00171; match to protein family HMM TIGR01804 betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12676692; Product type e : enzyme NAD+-dependent betaine aldehyde dehydrogenase	betaine aldehyde dehydrogenase	betaine aldehyde dehydrogenase	Betaine aldehyde dehydrogenase	
ECOLI00300	HTH-type transcriptional regulator betI	HTH-type transcriptional regulator betI	HTH-type transcriptional regulator betI	putative transcriptional regulator	HTH-type transcriptional regulator betI	similar to GP:15155810, and SP:O69786; identified by sequence similarity; putative transcriptional regulator BetI	HTH-type transcriptional regulator betI	TetR family transcriptional regulator	HTH-type transcriptional regulator betI	HTH-type transcriptional regulator betI	HTH-type transcriptional regulator betI	HTH-type transcriptional regulator betI	HTH-type transcriptional regulator betI	transcriptional regulator	HTH-type transcriptional regulator betI	HTH-type transcriptional regulator betI	Transcriptional regulator protein	InterProMatches:IPR009057; regulation of the polyketide synthase operon (pks) transcriptional regulator	similar to BR0554, transcriptional regulator BetI BetI, transcriptional regulator BetI	HTH-type transcriptional regulator betI	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator repressor of bet genes	identified by similarity to SP:P17446; match to protein family HMM PF00440 transcriptional regulator BetI	identified by similarity to SP:P17446; match to protein family HMM PF00440 transcriptional regulator BetI	regulatory protein, TetR	Bacterial regulatory protein TetR, HTH motif	Evidence 2b : Function of strongly homologous gene; Product type r : regulator putative transcriptional repressor for the cellular response to osmotic stress (TetR/AcrR family)	Conserved domains; TetR Family Bacterial Regulators/AcrR, transcriptional regulator Citation: T.Lamark et al. J Bacteriol. 1996. Mar:178(6):1655-62.  PMID:8626294 transcriptional regulator, BetI	transcriptional regulator, TetR family	transcriptional regulator, TetR family	
ECOLI00301	High-affinity choline transport protein	Probable choline transporter	Probable glycine-betaine transporter	High-affinity choline transport protein	High-affinity choline transport protein	High-affinity choline transport protein	High-affinity choline transport protein	Choline transporter	High-affinity choline transport protein	High-affinity choline transport protein	High-affinity choline transport protein	High-affinity choline transport protein	High-affinity choline transport protein	Choline/carnitine/betaine transporter family protein	High-affinity choline transport protein.,High- affinity uptake of choline driven by a proton- motive force. high-affinity choline transport protein	identified by match to protein family HMM PF02028; match to protein family HMM TIGR00842 transporter, BCCT family	choline/carnitine/betaine transport	choline/carnitine/betaine transport	BCCT transporter	BCCT family protein	High-affinity choline transport protein	High-affinity choline transport protein	High-affinity choline transport protein	High-affinity choline transport protein	Choline/carnitine/betaine transporter precursor	choline/carnitine/betaine transporter TIGRFAM: choline/carnitine/betaine transporter PFAM: BCCT transporter KEGG: ecs:ECs0360 high-affinity choline transport	Probable choline transporter	probable choline transporter	putative choline/glycine betaine transporter, BCCT family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	
ECOLI00302	Cyclic di-GMP phosphodiesterase yahA	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein	Regulatory protein BvgR	Regulatory protein BvgR	Regulatory protein BvgR	Putative two-component response regulator	Putative uncharacterized protein yahA	Response regulator VieA	Putative diguanylate phosphodiesterase	Putative uncharacterized protein	regulatory protein (EAL domain) hypothetical protein	regulatory protein (EAL domain) hypothetical protein	Rtn like protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	identified by match to protein family HMM PF00072; match to protein family HMM PF00563 response regulator	identified by match to protein family HMM PF00563 EAL domain protein	identified by match to protein family HMM PF00072; match to protein family HMM PF00563 response regulator/EAL domain protein	Sensory box/GGDEF family protein	Code: T; COG: COG2200 conserved hypothetical protein	EAL domain protein identified by match to protein family HMM PF00563	response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain)	diguanylate phosphodiesterase (EAL domain)	Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation	FOG: EAL domain COG2200	Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation	EAL domain, putative identified by match to protein family HMM PF00563	Putative uncharacterized protein	
ECOLI00303	Uncharacterized HTH-type transcriptional regulator yahB	Transcriptional regulator, LysR family	Transcriptional Regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein, LysR: (1.2e-18) LysR, substrate-binding: (3.4e-27) KEGG: hch:HCH_06627 transcriptional regulator, ev=1e-38, 32% identity	Hypothetical transcriptional regulator YahB	Hypothetical transcriptional regulator YahB	putative transcriptional regulator, LysR family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	putative DNA-bindng transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family precursor	KEGG: sit:TM1040_3283 transcriptional regulator, LysR family transcriptional regulator, LysR family	Transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein LysR; LysR substrate-binding KEGG: pen:PSEEN3961 transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Predicted DNA-bindng transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family precursor	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Transcriptional regulator	Predicted DNA-binding transcriptional regulator	
ECOLI00304	Uncharacterized protein yahC	Hypothetical membrane protein	Putative uncharacterized protein yahC	Glutathione-regulated potassium-efflux system protein	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yahC	Putative uncharacterized protein yahC	Putative uncharacterized protein yahC	Putative uncharacterized protein yahC	Predicted inner membrane protein	Putative uncharacterized protein yahC	YahC protein	predicted inner membrane protein	Predicted inner membrane protein	
ECOLI00305	Putative ankyrin repeat protein yahD	Ankyrin repeat domain protein	Ankyrin	Ankyrin repeat protein	Prophage LambdaW1, ankyrin repeat domain protein	Hypothetical ANK-repeats protein yahD	Putative transcription factor	Putative uncharacterized protein	, predicted protein, len = 227 aa, probably conserved hypothetical protein pa2498; predicted pI = 6.3465; good similarity to several hypothetical proteins; has 3 ankyrin repeats hypothetical protein, conserved	ankyrin repeat protein	ankyrin repeat protein identified by match to protein family HMM PF00023	ankyrin repeat domain 29 [Source:HGNC Symbol;Acc:27110]	conserved hypothetical protein identified by match to protein family HMM PF00023	ankyrin repeat protein identified by match to protein family HMM PF00023	transcript_id=ENSDNOT00000000204	FOG: Ankyrin repeat COG0666	transcript_id=ENSGACT00000014557	Ankyrin-repeats protein	Putative transcription factor	ankyrin	transcript_id=ENSEEUT00000014854	transcript_id=ENSSTOT00000003936	FOG: Ankyrin repeat-like KEGG: hch:HCH_00625 FOG: ankyrin repeat	transcript_id=ENSMLUT00000007139	Ankyrin PFAM: Ankyrin KEGG: lxx:Lxx09580 hypothetical protein	Ankyrin repeat domain-containing protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q8N6D5]	hypothetical protein, conserved	predicted protein	
ECOLI00306	Uncharacterized protein yahE	Hypothetical protein yahE	Putative uncharacterized protein yahE	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yahE	conserved hypothetical protein	Uncharacterized conserved protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yahE	Putative uncharacterized protein yahE	Putative uncharacterized protein yahE	Putative uncharacterized protein yahE	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein yahE	YahE protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI00306	Uncharacterized protein yahE	Hypothetical protein yahE	Putative uncharacterized protein yahE	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yahE	conserved hypothetical protein	Uncharacterized conserved protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yahE	Putative uncharacterized protein yahE	Putative uncharacterized protein yahE	Putative uncharacterized protein yahE	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein yahE	YahE protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI00307	Uncharacterized protein yahF	Hypothetical protein	Putative oxidoreductase subunit	Code: C; COG: COG0074 putative oxidoreductase subunit	YahF/FdrA-like protein	Putative uncharacterized protein yahF	FdrA	predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain	Oxidoreductase	FdrA family protein	FdrA family protein	FdrA family protein	Bacterial FdrA protein	Predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain	Bacterial FdrA protein	FdrA family protein	Bacterial FdrA protein	Bacterial FdrA protein	Putative uncharacterized protein	Protein fdrA	Putative enzyme with acyl-CoA domain	Putative enzyme with acyl-CoA domain	Putative enzyme with acyl-CoA domain	Putative enzyme with acyl-CoA domain	Putative enzyme with acyl-CoA domain	Putative uncharacterized protein	Predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain	Putative enzyme with acyl-CoA domain	pseudo	
ECOLI00308	Uncharacterized protein yahG	Putative uncharacterized protein yahG	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yahG	conserved hypothetical protein	Uncharacterized conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yahG	Putative uncharacterized protein yahG	Putative uncharacterized protein yahG	Putative uncharacterized protein yahG	Putative uncharacterized protein yahG	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein yahG	YahG protein	Conserved protein	conserved predicted protein	protein of unknown function DUF1116 PFAM: protein of unknown function DUF1116; KEGG: ecp:ECP_4035 hypothetical protein	Putative uncharacterized protein	
ECOLI00309	Putative uncharacterized protein yahH	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	YahH protein	Putative uncharacterized protein	
ECOLI00310	Carbamate kinase-like protein yahI	Carbamate kinase 2	Carbamate kinase-like protein yahI	Putative kinase	Carbamate kinase	Similar to Lactobacillus sakei carbamate kinase ArcC SW:ARCC_LACSK (O53090) (314 aa) fasta scores: E(): 3.8e-56, 51.93% id in 310 aa, and to Bacillus licheniformis carbamate kinase ArcC SW:ARCC_BACLI (O86134) (316 aa) fasta scores: E(): 1.3e-57, 52.1% id in 309 aa.  Possible alternative translational start site carbamate kinase	Code: E; COG: COG0549 putative kinase	identified by similarity to SP:P35836; match to protein family HMM PF00696; match to protein family HMM TIGR00746 carbamate kinase	carbamate kinase identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746	Carbamate kinase-like protein YahI	carbamate kinase TIGRFAM: carbamate kinase PFAM: aspartate/glutamate/uridylate kinase KEGG: mta:Moth_2117 carbamate kinase	carbamate kinase	Carbamate kinase-like protein YahI	carbamate kinase	ArcC2 protein	carbamate kinase	putative carbamate kinase-like protein	Carbamate kinase	Carbamate kinase	Carbamate kinase family protein	Carbamate kinase	carbamate kinase	Carbamate kinase family protein	Carbamate kinase	Carbamate kinase family protein	Carbamate kinase	Carbamate kinase family protein	Carbamate kinase	Putative carbamate kinase	
ECOLI00311	Uncharacterized protein yahJ	Hydrolase	Cytosine deaminase	Hypothetical protein yahJ	N-acyl-D-amino-acid deacylase family protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE DEAMINASE OR DEAMIDASE PROTEIN	Putative deaminase	Cytosine deaminase protein	Code: FR; COG: COG0402 putative deaminase	N-isopropylammelide isopropylaminohydrolase	Putative uncharacterized protein	Putative uncharacterized protein yahJ	N-isopropylammelide isopropylaminohydrolase PFAM: Amidohydrolase 3 KEGG: ssn:SSO_0309 putative deaminase	N-isopropylammelide isopropylaminohydrolase	N-isopropylammelide isopropylaminohydrolase PFAM: amidohydrolase; Amidohydrolase 3 KEGG: sme:SMc02420 cytosine deaminase	amidohydrolase identified by similarity to SP:O52063; match to protein family HMM PF07969	deaminase	cytosine deaminase	Cytosine deaminase and related metal-dependent hydrolase	Amidohydrolase 3	Amidohydrolase 3 precursor	N-isopropylammelide isopropylaminohydrolase	Amidohydrolase family protein	Amidohydrolase 3 precursor	Amidohydrolase 3	N-isopropylammelide isopropylaminohydrolase	Amidohydrolase family protein	Amidohydrolase 3 precursor	Amidohydrolase family protein	
ECOLI00312	Zinc-type alcohol dehydrogenase-like protein yahK	Alcohol dehydrogenase, zinc-containing	Alcohol dehydrogenase	Alcohol dehydrogenase	highly similar to uniprot|Q04894 Saccharomyces cerevisiae YMR318c;	Putative NADP-dependent alcohol dehydrogenase	Alcohol dehydrogenase	Hypothetical zinc-type alcohol dehydrogenase-like protein yahK	Putative zinc-binding dehydrogenase	Oxidoreductase, zinc-binding	Cinnamyl-alcohol dehydrogenase ELI3-2	Putative oxidoreductase	Zinc-containing alcohol dehydrogenase superfamily	similar to alcohol dehydrogenase hypothetical protein	conserved gene alcohol dehydrogenase (NADP-dependent, zinc-type)	similar to alcohol dehydrogenase hypothetical protein	identified by match to protein family HMM PF00107 oxidoreductase, zinc-binding dehydrogenase family	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark alcohol dehydrogenase	Putative NADP-dependent alcohol dehydrogenase	Alcohol dehydrogenase	go_component: soluble fraction [goid 0005625]; go_function: alcohol dehydrogenase (NADP+) activity [goid 0008106]; go_process: alcohol metabolism [goid 0006066] NADP-dependent alcohol dehydrogenase	probable 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase	alcohol dehydrogenase	identified by match to protein family HMM PF00107 oxidoreductase, zinc-binding	Zinc-containing alcohol dehydrogenase superfamily	Code: R; COG: COG1064 putative oxidoreductase	Alcohol dehydrogenase GroES-like	Zinc-containing alcohol dehydrogenase superfamily protein	Hypothetical zinc-type alcohol dehydrogenase-like protein YahK	
ECOLI00313	Uncharacterized protein yahL	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yahL	Putative uncharacterized protein yahL	Putative uncharacterized protein yahL	Putative uncharacterized protein yahL	YahL protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	

ECOLI00315	Uncharacterized membrane protein yahN	Hypothetical protein yahN	Putative cytochrome subunit of dehydrogenase	Amino acid efflux protein	IPR001123: Lysine exporter protein (LYSE/YGGA) paral putative transport protein	similar to Salmonella typhi CT18 RhtC-like transporter RhtC-like transporter	Putative transport protein	identified by match to protein family HMM PF01810 threonine efflux protein	Code: E; COG: COG1280 putative cytochrome subunit of dehydrogenase	putative threonine efflux protein COG1280	LysE family translocator, putative	Putative cytochrome subunit of dehydrogenase	Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA) KEGG: bur:Bcep18194_B1477 lysine exporter family protein (LysE/YggA)	Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA) KEGG: rru:Rru_A1198 lysine exporter protein (LysE/YggA)	Putative membrane transport protein	Transporter, LysE family	Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA) KEGG: rsp:RSP_2343 putative threonine efflux protein, RhtB family	putative cytochrome subunit of dehydrogenase	Putative uncharacterized protein	Putative uncharacterized protein	Putative homoserine/threonine efflux protein	Putative uncharacterized protein	Putative homoserine/threonine efflux protein	Homoserine/threonine efflux pump	Putative homoserine/threonine efflux protein	Lysine exporter protein	Putative uncharacterized protein	Putative uncharacterized protein	Translocator protein, LysE family superfamily	
ECOLI00316	UPF0379 protein yahO	Hypothetical protein yahO	Putative uncharacterized protein yahO	putative periplasmic protein	similar to Salmonella typhi CT18 probable secreted protein probable secreted protein	Putative periplasmic protein	Putative periplasmic protein	Putative uncharacterized protein yahO	Putative exported protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Probable secreted protein	Protein YahO	Protein YahO	Protein YahO	Probable secreted protein	Putative uncharacterized protein	Protein YahO	Putative uncharacterized protein	Protein YahO	Probable secreted protein	
ECOLI00317	Propionate catabolism operon regulatory protein	Probable transcriptional regulator	Propionate catabolism operon regulatory protein	Putative sigma interaction-related Fis-family transcriptional regulator	Propionate catabolism operon Regulatory protein	Propionate catabolism operon regulatory protein	Propionate catabolism operon regulatory protein	Propionate catabolism operon regulatory protein	Regulator for prp operon	CDS_ID OB1010 sigma-L-dependent transcriptional regulator	Putative propionate catabolism operon regulatory transcription regulator protein	Propionate catabolism operon regulatory protein	InterProMatches:IPR002197; Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355) putative transcriptional regulator	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark propionate catabolism regulatory protein	IPR001254: Peptidase S1, chymotrypsin family; IPR002078: Sigma-54 factor interaction domain; IPR002197: Helix-turn-helix, Fis-type regulator for prp operon (EBP family)	similar to Salmonella typhi CT18 propionate catabolism operon regulatory protein propionate catabolism operon regulatory protein	Propionate catabolism regulatory protein	Sigma-54 dependent sensory box protein	Propionate catabolism operon regulatory protein	propionate catabolism regulatory protein	PAS:Helix-turn-helix, Fis-type:Propionate catabolism activator, N-terminal	sigma54 specific transcriptional regulator with PAS sensor, Fis family	Sigma54 specific transcriptional regulator, Fis family	Propionate catabolism regulatory protein	propionate catabolism operon regulatory protein PrpR identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF06506; match to protein family HMM TIGR01199; match to protein family HMM TIGR02329	Propionate catabolism operon regulatory protein	propionate catabolism regulatory protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	sigma54 specific transcriptional regulator, Fis family KEGG: bur:Bcep18194_B0140 sigma54 specific transcriptional regulator with PAS sensor, fis family TIGRFAM: propionate catabolism operon regulatory protein PrpR PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; Propionate catabolism activator domain protein; ATPase associated with various cellular activities, AAA_5 SMART: PAS domain containing protein; AAA ATPase	sigma54 specific transcriptional regulator, Fis family KEGG: bcn:Bcen_5343 sigma54 specific transcriptional regulator, fis family TIGRFAM: propionate catabolism operon regulatory protein PrpR PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; Propionate catabolism activator domain protein; ATPase associated with various cellular activities, AAA_5 SMART: PAS domain containing protein; AAA ATPase	
ECOLI00318	Methylisocitrate lyase	Carboxyphosphonoenolpyruvate phosphonomutase (CPEP Phosphonomutase), putative	Carboxyphosphonoenolpyruvate phosphonomutase	Carboxyphosphonoenolpyruvate phosphonomutase	Putative carboxyvinyl-carboxyphosphonate phosphorylmutase	Carboxyphosphonoenolpyruvate phosphonomutase	Probable carboxyphosphonoenolpyruvate phosphonomutase	hypothetical carboxyvinyl-carboxyphosphonate phosphorylmutase	Methylisocitrate lyase	Putative carboxyphosphonoenolpyruvate phosphonomutase	Carboxyphosphonoenolpyruvate phosphonomutase	PEP phosphonomutase	Putative carboxyvinyl-carboxyphosphonate phosphorylmutase	Methylisocitrate lyase	Methylisocitrate lyase	Carboxyvinyl-carboxyphosphonate phosphorylmutase; possible methylisocitrate lyase	putative carboxyphosphonoenolpyruvate phosphonomutase	2-methylisocitratelyase 2	Probable methylisocitrate lyase	carboxyvinyl-carboxyphosphonate phosphorylmutase	Methylisocitrate lyase	pseudo	Probable methylisocitrate lyase	Methylisocitrate lyase	Probable methylisocitrate lyase	Carboxyphosphonoenolpyruvate phosphonomutase	Putative phosphonomutase 2	CDS_ID OB2267 carboxyvinyl-carboxyphosphonate phosphorylmutase	similar to AX065495-1|CAC25987.1| percent identity: 76 in 299 aa putative carboxyphosphonoenolpyruvate phosphonomutase	
ECOLI00318	Methylisocitrate lyase	Carboxyphosphonoenolpyruvate phosphonomutase (CPEP Phosphonomutase), putative	Carboxyphosphonoenolpyruvate phosphonomutase	Carboxyphosphonoenolpyruvate phosphonomutase	Putative carboxyvinyl-carboxyphosphonate phosphorylmutase	Carboxyphosphonoenolpyruvate phosphonomutase	Probable carboxyphosphonoenolpyruvate phosphonomutase	hypothetical carboxyvinyl-carboxyphosphonate phosphorylmutase	Methylisocitrate lyase	Putative carboxyphosphonoenolpyruvate phosphonomutase	Carboxyphosphonoenolpyruvate phosphonomutase	PEP phosphonomutase	Putative carboxyvinyl-carboxyphosphonate phosphorylmutase	Methylisocitrate lyase	Methylisocitrate lyase	Carboxyvinyl-carboxyphosphonate phosphorylmutase; possible methylisocitrate lyase	putative carboxyphosphonoenolpyruvate phosphonomutase	2-methylisocitratelyase 2	Probable methylisocitrate lyase	carboxyvinyl-carboxyphosphonate phosphorylmutase	Methylisocitrate lyase	pseudo	Probable methylisocitrate lyase	Methylisocitrate lyase	Probable methylisocitrate lyase	Carboxyphosphonoenolpyruvate phosphonomutase	Putative phosphonomutase 2	CDS_ID OB2267 carboxyvinyl-carboxyphosphonate phosphorylmutase	similar to AX065495-1|CAC25987.1| percent identity: 76 in 299 aa putative carboxyphosphonoenolpyruvate phosphonomutase	
ECOLI00319	2-methylcitrate synthase	Citrate synthase 2	Citrate synthase	similar to uniprot|P43635 Saccharomyces cerevisiae YPR001w CIT3;	Citrate synthase	Citrate synthase	Methylcitrate synthase/citrate synthase 2	Citrate synthase 2	Citrate synthase	Methylcitrate synthase	Citrate (Si)-synthase MmgD	Citrate synthase	2-methylcitrate synthase	Citrate synthase	2-methylcitrate synthase	Cit protein	2-methylcitrate synthase	identified by match to protein family HMM PF00285 citrate synthase MmgD	Methylcitrate synthase	2-methylcitrate synthase	2-methylcitrate synthase	Methylcitrate synthase	2-methylcitrate synthase	2-methylcitrate synthase	2-methylcitrate synthase/citrate synthase II	Methylcitrate synthase	Putative citrate synthase; propionate metabolism	CDS_ID OB2269 citrate synthase III	similar to AP001517-282|BAB06879.1| percent identity: 42 in 377 aa putative citrate synthase	
ECOLI00320	2-methylcitrate dehydratase	Mitochondrial protein that participates in respiration, induced by diauxic shift; homologous to E.  coli PrpD, may take part in the conversion of 2- methylcitrate to 2-methylisocitrate.  [Source:SGD;Acc:S000006206]	similar to sp|Q12428 Saccharomyces cerevisiae YPR002W Hypothetical 57.7 kDa protein in CIT3-HAL1 intergenic region, start by similarity	similar to sp|Q12428 Saccharomyces cerevisiae YPR002w PDH1 singleton, start by similarity	highly similar to uniprot|Q12428 Saccharomyces cerevisiae YPR002w;	Propionate catabolic protein PrpD	2-methylcitrate dehydratase	MmgE protein	2-methylisocitrate dehydratase	2-methylisocitrate dehydratase	2-methylcitrate dehydratase	putative 2-methylcitrate dehydratase	2-methylcitrate dehydratase	identified by match to protein family HMM PF03972 mmgE protein	2-methylcitrate dehydratase	2-methylcitrate dehydratase	2-methylcitrate dehydratase	2-methylcitrate dehydratase	2-methylcitrate dehydratase	CDS_ID OB2268 hypothetical protein	similar to AX065475-1|CAC25977.1| percent identity: 74 in 501 aa conserved hypothetical protein	2-methylcitrate dehydratase	BH3923 protein	Probable prpd protein	2-methylcitrate dehydratase	2-methylcitrate dehydratase	conserved gene 2-methylcitrate dehydratase PrpD	2-methylcitrate dehydratase	InterProMatches:IPR005656 2-methylisocitrate dehydratase	
ECOLI00321	Propionate--CoA ligase	PrpE protein	Propionate--CoA ligase	pseudo	Propionate--CoA ligase	Propionate--CoA ligase	Putative propionyl-CoA synthetase	Propionyl-coenzyme a synthetase prpe protein	Propionate--CoA ligase	IPR000873: AMP-dependent synthetase and ligase putative acetyl-CoA synthetase, propionate catabolism operon	similar to Salmonella typhi CT18 PrpE protein PrpE protein	Propionate--CoA ligase	similar to acetyl-CoA synthetase AcoE (GI:32265895) (Helicobacter hepaticus); go_component: cytosol [goid 0005829]; go_function: acetate-CoA ligase activity [goid 0003987]; go_process: acetyl-CoA biosynthesis [goid 0006085] acetate-CoA ligase, putative	Propionate-CoA ligase	AMP-dependent synthetase and ligase	AMP-dependent synthetase and ligase	propionate--CoA ligase	acyl-CoA synthetase short-chain family member 3 [Source:HGNC Symbol;Acc:24723]	Propionate--CoA ligase	transcript_id=ENSOCUT00000015757	transcript_id=ENSDNOT00000015342	transcript_id=ENSETET00000001961	Propionate-CoA ligase	Propionate--CoA ligase TIGRFAM: Propionate--CoA ligase PFAM: AMP-dependent synthetase and ligase KEGG: rso:RSc1518 PrpE protein ligase (putative propionyl-CoA synthetase)	Propionate--CoA ligase	Putative propionyl-CoA synthetase	Propionate--CoA ligase	
ECOLI00322	Cytosine permease	CodB	Cytosine permease	Purine-cytosine permease	Cytosine permease	Putative cytosine permease	putative cytosine permease/transport	Cytosine permease	Cytosine permease	Cytosine permease/transport	Cytosine permease	Purine-cytosine permease	nucleobase:cation symporter	IPR001248: Permease for cytosine/purines, uracil, thiamine, allantoin putative purine-cytosine permease	similar to Salmonella typhi CT18 cytosine permease cytosine permease	cytosine permease	Cytosine transporter	Putative purine-cytosine permease	identified by match to protein family HMM PF02133 cytosine transporter	permease for cytosine/purines, uracil, thiamine, allantoin	Permease for cytosine/purines, uracil, thiamine, allantoin	cytosine/purines, uracil, thiamine, allantoin transporter	cytosine permease identified by match to protein family HMM PF02133	Putative purine-cytosine permease	permease for cytosine/purines, uracil, thiamine, allantoin PFAM: permease for cytosine/purines, uracil, thiamine, allantoin KEGG: bja:bll3347 unknown protein	Cytosine permease	permease for cytosine/purines, uracil, thiamine, allantoin PFAM: permease for cytosine/purines, uracil, thiamine, allantoin KEGG: efa:EF3277 cytosine permease, putative	cytosine permease identified by match to protein family HMM PF02133	Putative permease	
ECOLI00323	Cytosine deaminase	Cytosine deaminase	Cytosine deaminase	hypothetical cytosine deaminase	Possible cytosine deaminase	Cytosine deaminase	Putative uncharacterized protein	Cytosine deaminase	Cytosine deaminase	Cytosine deaminase	Cytosine deaminase and related metal-dependent hydrolases	putative cytosine deaminase	Cytosine deaminase	similar to SMB0128 on S. meliloti pSymb; SMA2371; glimmer prediction; very similar to E. coli cytosine deaminase, P25524 putative CodA1 cytosine deaminase	Cytosine deaminase	cytosine deaminase	Putative cytosine deaminase	Cytosine deaminase	similar to AE004481-2|AAG03826.1| percent identity: 42 in 416 aa putative cytosine deaminase	creatinine deaminase	Cytosine deaminase	Cytosine deaminase	Probable cytosine deaminase (Cytosine aminohydrolase) protein	identified by similarity to SP:P25524 cytosine deaminase, putative	Cytosine deaminase protein	cytosine deaminase	IPR006680: Amidohydrolase putative cytosine deaminase	similar to Salmonella typhi CT18 cytosine deaminase cytosine deaminase	Cytosine deaminase	
ECOLI00324	HTH-type transcriptional regulator cynR	Probable LysR-type transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulators, LysR family	HTH-type transcriptional regulator cynR	Cyn operon transcriptional activator	identified by similarity to EGAD:6257; match to protein family HMM PF00126 transcriptional regulatory protein GltC, putative	Transcriptional regulators, LysR family	Cyn operon transcriptional regulator	Transcription activator of glutamate synthase operon	identified by similarity to SP:P27111; match to protein family HMM PF00126; match to protein family HMM PF03466 transcription regulator CynR, putative	identified by similarity to SP:P27111; match to protein family HMM PF00126; match to protein family HMM PF03466; match to protein family HMM TIGR01199 transcriptional regulator CynR	regulatory protein, LysR:LysR, substrate-binding	transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator (LysR family)	Transcriptional regulator, LysR family protein	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: plu:plu0110 cyn operon transcriptional activator	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: rme:Rmet_5606 transcriptional regulator, LysR family	malolactic fermentation system transcription activator	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bcn:Bcen_4781 transcriptional regulator, LysR family	transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466	Malolactic fermentation system transcriptional activator	Transcriptional regulator, LysR family, putative	cyn operon transcriptional activator	transcriptional regulator CynR Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator	Transcriptional regulator, LysR family protein	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bam:Bamb_5949 transcriptional regulator, LysR family	transcriptional regulator, LysR family	
ECOLI00325	Carbonic anhydrase 1	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrases	Carbonic anhydrase 1	Carbonic anhydrase	SC9B1.02c, probable carbonic anhydrase, len: 193aa; similar to many eg. SW:CYNT_ECOLI carbonic anhydrase from Escherichia coli (219 aa) fasta scores; opt: 512, z-score: 618.8, E(): 3.8e-27, (43.6% identity in 188 aa overlap).  Contains two Pfam matches to entry PF00484 Pro_CA, Prokaryotic-type carbonic anhydrases and Prosite matches to PS00705 Prokaryotic-type carbonic anhydrases signature 2 and PS00704 Prokaryotic-type carbonic anhydrases signature 1. probable carbonic anhydrase	Carbonic anhydrase	carbonic anhydrase	Carbonic anhydrase	identified by similarity to SP:P17582; match to protein family HMM PF00484 carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonic anhydrase	Carbonate dehydratase	Carbonate dehydratase	Carbonic anhydrase COG0288	Carbonic anhydrase	beta-carbonic anhydrase	hypothetical protein similarity to COG0288 Carbonic anhydrase(Evalue: 2E-59)	carbonic anhydrase	Carbonate dehydratase	Carbonate dehydratase PFAM: carbonic anhydrase KEGG: bur:Bcep18194_B2816 carbonate dehydratase	carbonic anhydrase identified by match to protein family HMM PF00484	Carbonate dehydratase	
ECOLI00326	Cyanate hydratase	Cyanate hydratase	hypothetical cyanate lyase	Cyanate hydratase	Cyanate hydratase	Cyanate hydratase	Cyanate hydratase	Cyanate hydratase	Cyanate hydratase	Cyanate hydratase	Cyanate hydratase	Cyanate hydratase	go_function: cyanate hydratase activity [goid 0008824]; go_process: response to toxin [goid 0009636] cyanate hydratase, putative	Cyanate lyase	identified by similarity to SP:P00816; match to protein family HMM PF02560; match to protein family HMM TIGR00673 cyanate hydratase	identified by match to protein family HMM PF02560; match to protein family HMM TIGR00673 cyanate hydratase	Cyanase	Cyanase	Cyanase	Cyanase	Cyanate lyase	Cyanase	Cyanate hydratase	Cyanate lyase	cyanate lyase KEGG: bpm:BURPS1710b_3463 cyanate hydratase TIGRFAM: cyanate lyase PFAM: Cyanate lyase domain protein	cyanate hydratase identified by match to protein family HMM PF02560; match to protein family HMM TIGR00673	cyanate lyase KEGG: bcn:Bcen_4778 cyanate lyase TIGRFAM: cyanate lyase PFAM: Cyanate lyase domain protein	Cyanase	cyanate lyase KEGG: rpb:RPB_2057 cyanate lyase TIGRFAM: cyanate lyase PFAM: Cyanate lyase domain protein	
ECOLI00327	Cyanate transport protein cynX	Cyanate transport protein	Probable major facilitator superfamily (MFS) transporter	Putative membrane transport protein	Putative membrane transport protein	pseudo	Cyanate transport	Membrane protein, putative	hypothetical protein	Putative uncharacterized protein gbs0822	MFS transporter	Cyanate transporter, putative	Cyanate permease	identified by match to protein family HMM PF07690 major facilitator family transporter	identified by match to protein family HMM PF07690 cyanate transporter, putative	Major facilitator superfamily MFS_1	major facilitator superfamily MFS_1	major facilitator family transporter	major facilitator superfamily MFS_1	Major facilitator superfamily (MFS_1) transporter	conserved hypothetical protein-signal peptide and transmembrane prediction	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: bur:Bcep18194_B2468 major facilitator superfamily (MFS_1) transporter	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: reu:Reut_B5382 major facilitator superfamily MFS_1	cyanate transport protein CynX identified by match to protein family HMM PF07690	Cyanate transport protein CynX	putative cyanate permease	putative transporter, MFS family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	MFS transporter; MFS transporter cyanate permease family	MFS transporter MFS transporter, cyanate permease family 12 TMHs	
ECOLI00328	Galactoside O-acetyltransferase	Galactoside-O-acetyltransferase	Maltose O-acetyltransferase	Galactoside O-acetyltransferase	Putative uncharacterized protein	Acetyltransferase	Galactoside O-acetyltransferase	Galactoside O-acetyltransferase	go_function: maltose O-acetyltransferase activity [goid 0008925]; go_function: acetyltransferase activity [goid 0016407] maltose O-acetyltransferase, putative	Thiogalactoside acetyltransferase	Galactoside O-acetyltransferase	Acetyltransferase	Putative acetyltransferase SAV2555	Galactoside O-acetyltransferase	putative transferase hexapeptide repeat containing protein	acetyltransferase	Galactoside O-acetyltransferase	Putative uncharacterized protein	hypothetical protein, similar to O-acetyltransferase	Ortholog of S. aureus MRSA252 (BX571856) SAR2635 putative acetyltransferase	hypothetical protein, similar to O-acetyltransferase	putative acetyltransferase in HXT11-HXT8 intergenic region	Similar to Bacillus subtilis probable maltose O-acetyltransferase MaA or BSU40850 SWALL:MAA_BACSU (SWALL:P37515) (184 aa) fasta scores: E(): 3.6e-12, 40.51% id in 195 aa, and to Lactobacillus plantarum galactoside O-acetyltransferase Thga2 or LP_1933 SWALL:CAD64321 (EMBL:AL935257) (202 aa) fasta scores: E(): 3.8e-50, 68.36% id in 196 aa, and to Bifidobacterium longum probable sugar O-acetyltransferase bl1719 SWALL:Q8CZF3 (EMBL:AE014805) (225 aa) fasta scores: E(): 1.1e-22, 38.34% id in 193 aa putative sugar O-acetyltransferase	hypothetical protein, similar to O-acetyltransferase	Similar to Escherichia coli galactoside O-acetyltransferase LacA SW:THGA_ECOLI (P07464) (203 aa) fasta scores: E(): 9.1e-28, 43.01% id in 186 aa, and to Streptococcus pyogenes putative acetyltransferase SPY1065 TR:Q99ZU6 (EMBL:AE006551) (188 aa) fasta scores: E(): 1.5e-42, 56.45% id in 186 aa putative acetyltransferase	identified by similarity to EGAD:12452; match to protein family HMM PF00132 galactoside O-acetyltransferase	Acetyltransferase	acetyltransferase, putative	acetyltransferase family protein identified by match to protein family HMM PF00132	
ECOLI00329	Lactose permease	Lactose permease	Galactoside permease	Sugar-proton symporter	pseudo	MFS lactose lactose-proton symporter	Permeases of the major facilitator superfamily ProP protein	Lactose permease	Hypothetical protein	Lactose permease	Na+/melibiose symporter related transporter	Hypothetical protein	hypothetical protein, conserved	Major facilitator superfamily MFS_1	Hypothetical protein	galactoside permease	Anion symport for sucrose, putative	Galactoside permease	Major facilitator superfamily MFS_1	Putative uncharacterized protein	Lactose permease	Oligosaccharide/H+ symporter, major facilitator superfamily (MFS) precursor	Oligosaccharide/H+ symporter, major facilitator superfamily	Putative uncharacterized protein	Lactose/galactose transporter	Lactose permease	Lactose permease	Oligosaccharide/H+ symporter, major facilitator superfamily	Lactose permease	
ECOLI00330	Beta-galactosidase	Beta-galactosidase	Beta-galactosidase	Beta-galactosidase	putative beta-galactosidase	Beta-galactosidase	Beta-galactosidase	Beta-galactosidase	SCE65.15c, possible beta-galatosidase, len: 995 aa; similar to SW:BGAL_ECOLI (EMBL:J01636) Escherichia coli beta-galactosidase (EC 3.2.1.23) (lactase) lacZ, 1023 aa; fasta scores: opt: 1594 z-score: 1693.3 E(): 0; 33.6% identity in 1039 aa overlap. Contains Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl hydrolases family and match to Prosite entry PS00719 Glycosyl hydrolases family 2 signature 1 putative beta-galatosidase	Beta-galactosidase	Beta-galactosidase	Beta-galactosidase	Code: G; COG: COG3250 beta-D-galactosidase	Code: G; COG: COG3250 beta-D-galactosidase	Beta-galactosidase	Beta-galactosidase	beta-galactosidase identified by similarity to SP:O33815; match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929	Beta-galactosidase	beta-galactosidase	Beta-galactosidase	Beta-galactosidase	Beta-galactosidase	Beta-galactosidase, putative similar to GenBank Accession Number BAD87855.1| putative beta-galactosidase [Oryza sativa] 707 0.0; go_component: beta-galactosidase complex; go_function: hydrolase activity, hydrolyzing O-glycosyl compounds; beta-galactosidase activity; go_process: carbohydrate metabolism	Beta-galactosidase	Beta-galactosidase PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding KEGG: vvy:VVA0165 beta-galactosidase	beta-galactosidase	Beta-galactosidase	Glycoside hydrolase family 2, TIM barrel	Beta-galactosidase	
ECOLI00331	Lactose operon repressor	Code: K; COG: COG1609 transcriptional repressor of the lac operon	Code: K; COG: COG1609 transcriptional repressor of the lac operon	Lactose operon repressor	Lac operon repressor	lac operon repressor	Lactose operon repressor	Putative uncharacterized protein	Lactose operon repressor	DNA-binding transcriptional repressor	Lactose operon repressor	Transcriptional regulator, LacI family	Lactose operon repressor	Putative uncharacterized protein	Lactose operon repressor	Lactose operon repressor LacI	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	LacI protein	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor LacI	Transcriptional regulator, LacI family	Lactose operon repressor	
ECOLI00332	Mhp operon transcriptional activator	Transcriptional regulator, IclR family	Transcriptional regulator for mhp operon	identified by match to protein family HMM PF01614 transcriptional regulator, IclR family	identified by similarity to SP:P77569; match to protein family HMM PF01614 transcriptional regulator, IclR family	regulatory protein, IclR	regulatory proteins, IclR	Citation: J. Bacteriol. 178 (17), 5249-5256 (1996)-E.coli transcriptional regulator, IclR family/MhpR	Transcriptional regulator, IclR family	Transcriptional Regulator, IclR family	transcriptional regulator, IclR family SMART: regulatory proteins, IclR: (7.6e-09) KEGG: pfo:Pfl_1294 transcriptional regulator, IclR family, ev=1e-19, 27% identity	transcriptional regulator, IclR family PFAM: regulatory protein, IclR KEGG: ecs:ECs0401 transcriptional regulator for mhp operon	transcriptional regulator, putative	Regulatory proteins, IclR	Beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family	Transcriptional regulator, IclR family	Transcriptional regulator for mhp operon	putative transcriptional regulator	regulatory proteins, IclR SMART: regulatory proteins, IclR KEGG: rsp:RSP_3024 transcriptional regulator, IclR family/MhpR	Putative transcriptional regulatory protein, IclR family	transcriptional regulator, IclR family PFAM: Helix-turn-helix, type 11 SMART: regulatory proteins, IclR KEGG: dar:Daro_0897 regulatory proteins, IclR	Regulatory proteins, IclR	Transcriptional activator for 3- hydroxyphenylpropionate degradation	Regulatory protein IclR	Mhp operon transcriptional activator	Transcriptional regulator, IclR family	Transcriptional regulator, IclR family	DNA-binding transcriptional activator, 3HPP- binding	Mhp operon transcriptional activator	
ECOLI00333	3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	Monooxygenase, FAD-binding	Code: HC; COG: COG0654 3-(3-hydroxyphenyl)propionate hydroxylase	transcript_id=ENSGACT00000003910	Monooxygenase, FAD-binding protein	3-(3-hydroxy-phenyl)propionate hydroxylase identified by match to protein family HMM PF01494	Monooxygenase, FAD-binding	Monooxygenase, FAD-binding precursor	Putative 3-(3-hydroxyphenyl)propionatehydroxylase	monooxygenase, FAD-binding PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase KEGG: mmc:Mmcs_3786 monooxygenase, FAD-binding protein	monooxygenase, FAD-binding PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase KEGG: mmc:Mmcs_3786 monooxygenase, FAD-binding protein	predicted protein go_function: monooxygenase activity; go_process: aromatic compound metabolism; electron transport	3-(3-hydroxy-phenyl)propionate hydroxylase	putative 3-(3-hydroxy-phenyl)propionate hydroxylase, FAD/NAD(P)-binding Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 3531186; Product type e : enzyme	monooxygenase, FAD-binding PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase KEGG: mmc:Mmcs_3786 monooxygenase, FAD-binding protein	ustilago_maydis hypothetical protein	Monooxygenase, FAD-binding	3-(3-hydroxyphenyl)propionate hydroxylase	3-(3-hydroxy-phenyl)propionate hydroxylase	monooxygenase, FAD-binding PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase KEGG: mmc:Mmcs_3786 monooxygenase, FAD-binding protein	Monooxygenase FAD-binding	3-(3-hydroxyphenyl)propionate hydroxylase	3-(3-hydroxy-phenyl)propionate hydroxylase	Monooxygenase FAD-binding	3-(3-hydroxy-phenyl)propionate hydroxylase	Monooxygenase FAD-binding	Monooxygenase FAD-binding	
ECOLI00334	2,3-dihydroxyphenylpropionate/2,3- dihydroxicinnamic acid 1,2-dioxygenase	2,3-dihydroxyphenylpropionate/2,3- dihydroxicinnamic acid 1,2-dioxygenase	2,3-dihydroxyphenylpropionate/2,3- dihydroxicinnamic acid 1,2-dioxygenase	Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B	2,3-dihydroxyphenylpropionate 1,2-dioxygenase	Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B	2,3-dihydroxyphenylpropionate 1,2-dioxygenase 2,3-dihydroxyphenylpropionate 1,2-dioxygenase similar in function (51% identity) to TrEMBL: P54711,PF02900, IPR004183 The LigAB enzyme (a protocatechuate 4,5-dioxygenase EC: 1.13.11.8), of Sphingomonas paucimobilis oxidizes protocatechuate (or 3,4-dihydroxybenzoic acid,PCA). The enzyme belongs to the class III extradiol-type catecholic dioxygenase family, which catalyzes the ring-opening reaction of protocatechuate and related compounds . Other members of this family include 3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC: 1.13.11.15) and 2,3-dihydroxyphenylpropionate 1,2-dioxygenase. FUNCTION: Extradiol cleavage of 2,3-dihydroxyphenylpropionic acid.  COFACTOR: Ferrous ion. PATHWAY: 3-hydroxyphenylpropionate degradation. SUBUNIT: Homotetramer. No Signal Peptide or TMH being reported as present. High confidence in function and specificity	Putative 2,3-dihydroxyphenylpropionate 1,2- dioxygenase	Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B KEGG: mpa:MAP0695 2,3-dihydroxyphenylpropionate 1,2-dioxygenase	extradiol dioxygenase, MhpB cytoplasmic protein involved in the catabolism of 3-(3- hydroxyphenyl)propionate. contains catalytic LigB subunit of aromatic ring-opening dioxygenase	Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B KEGG: mmc:Mmcs_3785 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B	Metapyrocatechase 1	3-(2,3-dihydroxyphenyl) propionic acid dioxygenase	Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B KEGG: mmc:Mmcs_3785 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B	Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B	2,3-dihydroxyphenylpropionate 1,2-dioxygenase	2,3-dihydroxyphenylpropionate 1,2-dioxygenase	Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B	extradiol ring-cleavage dioxygenase, class III enzyme, subunit B KEGG: mva:Mvan_4244 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B	Extradiol ring-cleavage dioxygenase class III protein subunit B	2,3-dihydroxyphenylpropionate 1,2-dioxygenase	2,3-dihydroxyphenylpropionate 1,2-dioxygenase	Extradiol ring-cleavage dioxygenase class III protein subunit B	2,3-dihydroxyphenylpropionate 1,2-dioxygenase	Extradiol ring-cleavage dioxygenase class III protein subunit B	Extradiol dioxygenase, MhpB	Extradiol ring-cleavage dioxygenase class III protein subunit B	Putative 3-(2,3-dihydroxyphenyl) propionic acid dioxygenase	2,3-dihydroxyphenylpropionate 1,2-dioxygenase	
ECOLI00335	2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase	Proline iminopeptidase	Proline iminopeptidase	Predicted hydrolase or acyltransferase, alpha/beta hydrolase superfamily	Cultivar specificity protein W78	best DB hits: BLAST: embl:CAA96346.1; (Z71679) ORF YNR064c [Saccharomyces cerevisiae]; E=3e-59 embl:CAB56721.1; (AL121600) putative hydrolase [Streptomyces; E=1e-53 embl:CAB56691.1; (AL121596) putative hydrolase [Streptomyces; E=6e-30 COG: YNR064c; COG0596 Predicted hydrolases or acyltransferases; E=3e-60 Rv2296; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-15 BS_yugF; COG0596 Predicted hydrolases or acyltransferases; E=2e-15 PFAM: PF00561; alpha/beta hydrolase fold; E=7.1e-28 putative hydrolase	Putative hydrolase	2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase	ESTERASE/LIPASE 1	SCE29.02, probable hydrolase, len: 272 aa; similar to many e.g. TR:O52809 (EMBL:AJ223998) from the vancomycin biosynthesis cluster of Amycolatopsis orientalis (276 aa) fasta scores; opt: 892, z-score: 1028.9, E(): 0, (50.9% identity in 271 aa overlap) and TR:O67982 (EMBL:AF003947) PcaL; single polypeptide combining 3-oxoadipate enol-lactone hydrolyzing and 4-carboxymuconolactone decarboxylating activityfrom Rhodococcus opacus (400 aa) fasta scores; opt: 288, z-score: 335.4, E(): 2.3e-11, (32.0% identity in 256 aa overlap). Contains Pfam match to entry PF00561 abhydrolase, alpha/beta hydrolase fold, score 77.80, E-value 2.2e-19. putative hydrolase	Predicted hydrolases or acyltransferases	Hydrolase	Alpha/beta superfamily hydrolase	Putative uncharacterized protein	Non-heme chloride peroxidase	predicted alpha/beta hydrolase superfamily protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative peroxidase/hydrolase	Arylesterase, putative	alpha/beta hydrolase fold family hydrolase	Alpha/beta hydrolase fold	alpha/beta hydrolase fold	alpha/beta hydrolase fold	alpha/beta hydrolase fold	putative hydrolase protein Similar to SMc03098 [Sinorhizobium meliloti], hydrolase PSPTO2495 [Pseudomonas syringae pv. tomato str.DC3000]and haloalkane dehalogenase dhaAf [Mycobacteriumsp.] Similar to swissprot:Q92LP0 Putative location:bacterial cytoplasm Psort-Score: 0.1880; go_function: hydrolase activity [goid 0016787]; go_function: catalytic activity [goid 0003824]; go_process: aromatic compound metabolism [goid 0006725]	Hydrolase	Alpha/beta hydrolase fold	alpha/beta fold hydrolase	alpha/beta hydrolase fold PFAM: alpha/beta hydrolase fold KEGG: cte:CT0947 hydrolase, alpha/beta hydrolase fold family	
ECOLI00336	2-keto-4-pentenoate hydratase	CDS_ID OB0419 2-hydroxypenta-2,4-dienoate hydratase	Putative hydratase/decarboxylase; protein	2-oxo-hept-3-ene-1,7-dioate hydratase; 2-oxo-hept -4-ene-1,7-dioate hydratase	Hydratase/decarboxylase	Code: Q; COG: COG3971 2-keto-4-pentenoate hydratase	Hydratase/decarboxylase	2-keto-4-pentenoate hydratase start codon not provided	4-oxalocrotonate decarboxylase	Hydratase/decarboxylase	Hydratase/decarboxylase	2-keto-4-pentenoate hydratase	MhpD protein This family consist of various hydratases and 4-oxalocrotonate decarboxylases which are involved in the bacterial meta-cleavage pathways for degradation of aromatic compounds, TREMBL:Q51981 (54% identity); SWISSPROT:P77608 (50% identity). InterPro (IPR002607): Hydratase/decarboxylase Pfam (PF01689): Hydratase/decarboxylase. High confidence in function and specificity	Hydratase/decarboxylase PFAM: Hydratase/decarboxylase KEGG: nfa:nfa33180 putative hydratase	4-oxalocrotonate decarboxylase PFAM: Hydratase/decarboxylase KEGG: mmc:Mmcs_5436 4-oxalocrotonate decarboxylase	4-oxalocrotonate decarboxylase	4-oxalocrotonate decarboxylase	2-keto-4-pentenoate hydratase	2-keto-4-pentenoate hydratase	4-oxalocrotonate decarboxylase	2-keto-4-pentenoate hydratase	4-oxalocrotonate decarboxylase	2-keto-4-pentenoate hydratase	4-oxalocrotonate decarboxylase	4-oxalocrotonate decarboxylase	4-oxalocrotonate decarboxylase	2-oxo-hept-3-ene-1,7-dioate hydratase	2-keto-4-pentenoate hydratase	Putative hydratase/decarboxylase	
ECOLI00337	Acetaldehyde dehydrogenase	identified by similarity to SP:P77580; match to protein family HMM PF02396 acetaldehyde dehydrogenase, putative	Acetaldehyde dehydrogenase	Acetaldehyde dehydrogenase 3	Acetaldehyde dehydrogenase	SCP1.54c, possible acetaldehyde dehydrogenase (acylating), len: 293aa; similar to many eg. TR:Q51962 (EMBL:U13232) acetaldehyde dehydrogenase (acylating) from Pseudomonas putida (307 aa) fasta scores; opt: 550, z-score: 658.2, E(): 3.4e-29, 35.0% identity in 294 aa overlap. putative acetaldehyde dehydrogenase (acylating)	Acetaldehyde dehydrogenase	Acetaldehyde dehydrogenase protein	Semialdehyde dehydrogenase, NAD-binding	Semialdehyde dehydrogenase, NAD-binding	Code: Q; COG: COG4569 acetaldehyde dehydrogenase	identified by similarity to SP:P77580; match to protein family HMM PF01118 acetaldehyde dehydrogenase	Semialdehyde dehydrogenase, NAD-binding	acetaldehyde dehydrogenase	acetaldehyde dehydrogenase identified by match to protein family HMM PF01118	Semialdehyde dehydrogenase, NAD-binding protein	Acetaldehyde dehydrogenase	Semialdehyde dehydrogenase, NAD-binding PFAM: Semialdehyde dehydrogenase, NAD - binding KEGG: nfa:nfa33190 putative acetaldehyde dehydrogenase	acetaldehyde dehydrogenase identified by match to protein family HMM PF02396	Semialdehyde dehydrogenase, NAD-binding	Acylating acetaldehyde dehydrogenase	Acetaldehyde dehydrogenase	Acetaldehyde dehydrogenase	Putative acetaldehyde dehydrogenase	acetaldehyde dehydrogenase	Semialdehyde dehydrogenase, NAD-binding PFAM: Semialdehyde dehydrogenase, NAD - binding KEGG: mmc:Mmcs_5437 semialdehyde dehydrogenase, NAD - binding protein	Acetaldehyde dehydrogenase-like protein	Arginase/agmatinase/formiminoglutamase	Acetaldehyde dehydrogenase	
ECOLI00338	4-hydroxy-2-oxovalerate aldolase	Hydroxymethylglutaryl-CoA lyase	Hydroxymethylglutaryl-CoA lyase	4-hydroxy-2-oxovalerate aldolase	Putative homocitrate synthase	4-hydroxy-2-oxovalerate aldolase	4-hydroxy-2-oxovalerate aldolase protein	identified by match to protein family HMM PF00682 4-hydroxy-2-oxovalerate aldolase domain protein	Pyruvate carboxyltransferase:DmpG-like communication	Pyruvate carboxyltransferase:DmpG-like communication	HMG-CoA lyase-like	Code: E; COG: COG0119 4-hydroxy-2-ketovalerate aldolase	4-hydroxy-2-oxovalerate aldolase	Pyruvate carboxyltransferase family protein	pyruvate carboxyltransferase	Putative hydroxymethylglutaryl-CoA lyase	pyruvate carboxyltransferase	pyruvate carboxyltransferase PFAM: pyruvate carboxyltransferase; DmpG communication domain protein KEGG: ecj:JW0343 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I	4-hydroxy-2-oxovalerate aldolase cytoplasmic protein supposed involvement in one, or several, catabolic pathways [catalytic activity: 4-hydroxy-2-oxovalerate = pyruvate + acetaldehyde]	Hypothetical protein	4-Hydroxy-2-oxovalerate aldolase	2-oxo-4-hydroxypentanoate aldolase	4-hydroxy-2-oxovalerate aldolase	4-hydroxy-2-oxovalerate aldolase	Putative uncharacterized protein	Pyruvate carboxyltransferase	4-hydroxy-2-ketovalerate aldolase	4-hydroxy-2-oxovalerate aldolase	
ECOLI00339	Putative 3-hydroxyphenylpropionic acid transporter	Putative sugar transport protein	MFS transporter	3-hydroxyphenylpropionic acid transporter	Putative transport protein	Evidence 1 : Function experimentally demonstrated in the studied organism; PubMedId : 2298704, 8449410, 8331077, 8181753, 8063101, 8002591, 9515921, 12514037; Product type t : transporter transporter of hydroxycinnamates (MFS superfamily)	Code: GEPR; COG: COG0477 putative transport protein	Major facilitator superfamily (MFS_1) transporter	Major facilitator superfamily MFS_1	3-hydroxyphenylpropionic acid transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690	major facilitator superfamily MFS_1 PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: bur:Bcep18194_B0053 major facilitator superfamily (MFS_1) transporter	transcript_id=ENSEEUT00000006788	major facilitator superfamily permease	transcript_id=ENSOGAT00000013801	major facilitator superfamily MFS_1 PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: bcn:Bcen_5226 major facilitator superfamily MFS_1	Major facilitator superfamily (MFS) aromatic acid transporter	MFS transporter, aromatic acid:H+ symporter (AAHS) family	Botrytis cinerea hypothetical protein	Major facilitator superfamily MFS_1	MFS transporter, aromatic acid:H+ symporter (AAHS) family	Putative 3-hydroxyphenylpropionic transport protein	Permease of the major facilitator superfamily,putative 3-hydroxyphenylpropionate transporter	Putative 3-hydroxyphenylpropionic acid transporter	Major facilitator superfamily MFS_1	Major facilitator superfamily MFS_1	Predicted 3-hydroxyphenylpropionic transporter	Putative 3-hydroxyphenylpropionic acid transporter	Benzoate transport precursor	Putative 3-hydroxyphenylpropionic acid transporter	
ECOLI00340	Uncharacterized protein yaiL	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical nucleoprotein/polynucleotide-associated enzyme	Hypothetical protein yaiL	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative nucleoprotein/polynucleotide-associated enzyme	Nucleoprotein/polynucleotide-associated enzyme	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative nucleoprotein/polynucleotide-associated enzyme	Putative uncharacterized protein	nucleoprotein/polynucleotide-associated enzyme	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	identified by similarity to GB:AAN67279.1 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3122 nucleoprotein/polynucleotide-associated enzyme	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function ; putative nucleoprotein/polynucleotide-associated enzyme	
ECOLI00341	S-formylglutathione hydrolase frmB	Esterase D	S-formylglutathione hydrolase	DEHA2E04708p;similar to uniprot|P40363 Saccharomyces cerevisiae YJL068C;	Putative esterase	Esterase D	S-formylglutathione hydrolase	Hypothetical protein yaiM	identified by match to PFAM protein family HMM PF00756 esterase, putative	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE S-FORMYLGLUTATHIONE HYDROLASE PROTEIN	S-FORMYLGLUTATHIONE HYDROLASE	S-formylglutathione hydrolase frmB	esterase	Similar to putative esterase YaiM of Escherichia coli	S-formylglutathione hydrolase	similar to BR0127, esterase, hypothetical esterase, hypothetical	Esterase D	Similar to: HI0184, YAIM_HAEIN conserved hypothetical protein	go_component: cytosol [goid 0005829]; go_function: carboxylesterase activity [goid 0004091]; go_process: formaldehyde catabolism [goid 0046294] esterase, putative	Best Blastp Hit: pir||G81097 esterase, probable NMB1305 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7226546|gb|AAF41680.1| (AE002479) esterase, putative [Neisseria meningitidis MC58] COG0627 Predicted esterase putative esterase D	Code: R; COG: COG0627 putative esterase	Esterase/lipase/thioesterase, active site:Putative esterase	putative esterase similarity:fasta; SWALL:ESTD_HUMAN (SWALL:P10768); Homo sapiens; esterase d; esD; length 282 aa; id=52.33; ungapped id=53.09; E()=2.9e-57; 279 aa overlap; query 1-276 aa; subject 3-280 aa similarity:fasta; SWALL:Q987D2 (EMBL:AP003011); Rhizobium loti; esterase; length 290 aa; id=73.91; ungapped id=73.91; E()=1.9e-88; 276 aa overlap; query 1-276 aa; subject 5-280 aa	probable S-formylglutathione hydrolase protein Similar to SMc01273 [Sinorhizobium meliloti] and BMEI1822 [Brucella melitensis] Similar to swissprot:Q92QE0 Putative location:bacterial cytoplasm Psort-Score: 0.2363; go_function: hydrolase activity [goid 0016787]; go_function: catalytic activity [goid 0003824]; go_function: S-formylglutathione hydrolase activity [goid 0018738]	S-formylglutathione hydrolase frmB	S-formylglutathione hydrolase	S-formylglutathione hydrolase frmB	esterase D COG0627 Predicted esterase	
ECOLI00342	S-(hydroxymethyl)glutathione dehydrogenase	Bifunctional enzyme containing both alcohol dehydrogenase and glutathione-dependent formaldehyde dehydrogenase activities, functions in formaldehyde detoxification and formation of long chain and complex alcohols, regulated by Hog1p-Sko1p.  [Source:SGD;Acc:S000002327]	similar to sp|P32771 Saccharomyces cerevisiae YDL168w SFA1 long-chain alcohol dehydrogenase and DEHA0G06457g Debaryomyces hansenii, start by similarity	Probable S-(hydroxymethyl)glutathione dehydrogenase 1 [Source:GeneDB_Spombe;Acc:SPBC1539.07c]	S-(hydroxymethyl)glutathione dehydrogenase	S-(hydroxymethyl)glutathione dehydrogenase	highly similar to uniprot|P32771 Saccharomyces cerevisiae YDL168w SFA1 long-chain alcohol dehydrogenase;	Alcohol dehydrogenase, class III	Alcohol dehydrogenase , formaldehyde dehydrogenase	Alcohol dehydrogenase class III	go_component: cytoplasm [goid 0005737]; go_function: formaldehyde dehydrogenase (glutathione) activity [goid 0004327]; go_process: formaldehyde assimilation [goid 0019649] formaldehyde dehydrogenase (glutathione), putative	Zinc-containing alcohol dehydrogenase	Putative alcohol dehydrogenase class III	S-(hydroxymethyl)glutathione dehydrogenase	Alcohol dehydrogenase class III	IPR002328: Zinc-containing alcohol dehydrogenase alcohol dehydrogenase class III	Alcohol dehydrogenase class-III	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme glutathione-dependent formaldehyde dehydrogenase	Zn-dependent alcohol dehydrogenases, class III AdhC protein	Alcohol dehydrogenase class III	Zinc-containing alcohol dehydrogenase superfamily	formaldehyde dehydrogenase, glutathione-dependent; Code: C; COG: COG1062 alcohol dehydrogenase class III	Evidence 2b : Function of strongly homologous gene; PubMedId : 1731906; Product type e : enzyme alcohol dehydrogenase class III	Alcohol dehydrogenase GroES-like protein	S-(hydroxymethyl)glutathione dehydrogenase	Alcohol dehydrogenase, formaldehyde dehydrogenase	S-(hydroxymethyl)glutathione dehydrogenase	Alcohol dehydrogenase, zinc-binding domain protein	glutathione-dependent formaldehyde dehydrogenase (alcohol dehydrogenase class III) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8891129; Product type e : enzyme	
ECOLI00343	Transcriptional repressor frmR	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein yaiN	similar to SP:P29480, PID:48415, SP:P29480, and PID:48415; identified by sequence similarity; putative conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Transcriptional repressor frmR	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	Code: S; COG: COG1937 putative alpha helix chain	conserved hypothetical protein	conserved hypothetical protein identified by match to protein family HMM PF02583	Transcriptional repressor frmR	Hypothetical cytosolic protein	Transcriptional repressor frmR	protein of unknown function DUF156 PFAM: protein of unknown function DUF156 KEGG: xac:XAC0733 hypothetical protein	Putative uncharacterized protein	Uncharacterized BCR, COG1937 family identified by match to protein family HMM PF02583	conserved hypothetical protein identified by match to protein family HMM PF02583	conserved hypothetical protein	Hypothetical protein	regulator protein that represses frmRAB operon	Hypothetical protein	Hypothetical protein	protein of unknown function DUF156 PFAM: protein of unknown function DUF156 KEGG: bms:BR0131 hypothetical protein	Putative uncharacterized protein	
ECOLI00344	Uncharacterized protein yaiO	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yaiO	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yaiO	Putative uncharacterized protein yaiO	Putative uncharacterized protein yaiO	pseudo	Putative uncharacterized protein yaiO	Putative uncharacterized protein yaiO	YaiO protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	


ECOLI01533	pseudo	Code: L; COG: COG2801 IS2 ORF2	
ECOLI00345	Uncharacterized protein yaiP	Glycosyl transferase, group 2 family protein	Hypothetical protein	Predicted glycosyltransferase	identified by match to PFAM protein family HMM PF00535 glycosyl transferase, group 2 family protein	N-acetylglucosaminyltransferase COG1215 [M] Glycosyltransferases, probably involved in cell wall biogenesis	Putative glycosyl transferase	Putative uncharacterized protein yaiP	transmembrane family-2 glycosyl transferase-po ssibly involved in biofilm formation	Glycosyl transferase, family 2 precursor	Glycosyl transferase, family 2	putative glucosyltransferase	Glycosyl transferase, group 2 family domain protein	Glycosyl transferase family 2	Glycosyl transferase, group 2 family protein	Putative transmembrane glycosyl transferase precursor	Predicted glucosyltransferase	Glycosyl transferase, group 2 family protein	Glycosyl transferase family 2	Glycosyl transferase, group 2 family protein	glycosyl transferase, family 2 PFAM: glycosyl transferase, family 2 KEGG: plt:Plut_0982 glucosaminyltransferase	Putative uncharacterized protein	Putative membrane-associated glycosyltransferase	Putative membrane-associated glycosyltransferase	Putative membrane-associated glycosyltransferase	glycosyl transferase family 2 PFAM: glycosyl transferase family 2; chitin synthase; KEGG: cpo:COPRO5265_0045 chitin synthase	Glycosyl transferase family 2	Putative membrane-associated glycosyltransferase	Putative membrane-associated glycosyltransferase	
ECOLI00346	Uncharacterized protein yaiS	Putative conserved protein	SCP1.48c, unknown, len: 218aa; N-terminal region weakly similar to many eg. SW:P71311 (YAIS_ECOLI) hypothetical protein from Escherichia coli (185 aa) fasta scores; opt:  221, z-score: 290.7, E():  1e-08, 28.7% identity in 164 aa overlap. hypothetical protein	Code: S; COG: COG2120 conserved hypothetical protein	identified by similarity to GB:AAP25493.1; match to protein family HMM PF02585 conserved hypothetical protein	LmbE-like protein	Putative conserved protein	conserved hypothetical protein	LmbE family protein PFAM: LmbE family protein KEGG: lxx:Lxx09320 hypothetical protein	conserved hypothetical protein	LmbE family protein	LmbE family protein	Putative GlcNAc-PI de-N-acetylase	Putative uncharacterized protein	LmbE family protein	Putative N-acetyl glucosamine deacetylase (LmbE- like) precursor	Conserved protein	Putative GlcNAc-PI de-N-acetylase	LmbE family protein	Putative GlcNAc-PI de-N-acetylase	LmbE family protein	Putative LmbE-like protein	Putative GlcNAc-PI de-N-acetylase	Hypothetical conserved protein	LmbE family protein	Putative uncharacterized protein	Putative uncharacterized protein yaiS	LmbE family protein	Putative uncharacterized protein yaiS	
ECOLI00347	Taurine-binding periplasmic protein	Probable periplasmic taurine-binding protein	ABC transporter, periplasmic substrate-binding protein, putative	ABC transporter, substrate binding protein	Periplasmic component of taurine ABC transporter	Taurine-binding periplasmic protein	Sulfate ABC transporter substrate-binding protein	Product confidence : putative Gene name confidence : putative putative taurine uptake ABC transporter periplasmic solute-binding protein precursor	Taurine-binding periplasmic protein	Taurine ABC transporter, periplasmic taurine- binding protein	unknown protein	Taurine ABC transporter, periplasmic taurine- binding protein	Taurine transport system periplasmic protein	taurine transport system periplasmic protein	Residues 1 to 298 of 298 are 98 pct identical to residues 42 to 339 of a 339 aa protein from Escherichia coli K12 ref: NP_414899.1 taurine transport system periplasmic protein	Putative taurine-binding periplasmic protein	Assignment partly based on membership in taurine ABC transporter gene cluster.; identified by similarity to SP:Q47537 taurine ABC transporter, periplasmic taurine-binding protein	Taurine transport system substrate-binding protein	Taurine ABC transporter, periplasmic binding protein	ABC transporter, periplasmic taurine-binding protein	Taurine ABC transporter, periplasmic taurine- binding protein	taurine transport system periplasmic protein	identified by match to protein family HMM PF04069; match to protein family HMM PF06642; match to protein family HMM TIGR01729 taurine ABC transporter, periplasmic binding protein	identified by match to protein family HMM PF04069; match to protein family HMM PF06642; match to protein family HMM TIGR01729 taurine ABC transporter, periplasmic binding protein	Taurine ABC transporter, periplasmic binding protein	Code: P; COG: COG4521 taurine transport system periplasmic protein	Code: P; COG: COG4521 taurine transport system periplasmic protein	predicted ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic solute-binding protein COG0715	ABC transporter, substrate-binding protein, aliphatic sulphonates	
ECOLI00348	Taurine import ATP-binding protein tauB	Taurine import ATP-binding protein tauB	Taurine import ATP-binding protein tauB	Taurine import ATP-binding protein tauB	Residues 1 to 255 of 255 are 99 pct identical to residues 1 to 255 of a 255 aa protein from Escherichia coli K12 ref: NP_414900.1 taurine ATP-binding component of a transport system	Taurine import ATP-binding protein tauB	Taurine import ATP-binding protein tauB	Taurine uptake ABC transporter	Taurine import ATP-binding protein tauB	Taurine import ATP-binding protein tauB	identified by match to protein family HMM PF00005 taurine ABC transporter, ATP-binding protein	ABC transporter related	Code: P; COG: COG4525 taurine ATP-binding component of a transport system	Code: P; COG: COG4525 taurine ATP-binding component of a transport system	Code: P; COG: COG4525 taurine ATP-binding component of a transport system	taurine ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	Taurine import ATP-binding protein tauB	Putative taurine transport ATP-binding protein	Taurine import ATP-binding protein tauB	Taurine transport ATP-binding protein	taurine ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	taurine ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	Putative taurine transport ATP-binding protein	taurine ABC transporter, ATP-binding protein Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme	taurine ATP-binding component of a transport system Code: P; COG: COG4525	Taurine transport ATP-binding protein	taurine transport ATP-binding protein TauB	ABC transporter related	ABC transporter related precursor	
ECOLI00349	Taurine transport system permease protein tauC	Nitrate transport protein	Permease component of taurine ABC transporter	Taurine transport system permease protein tauC	identified by match to protein family HMM PF00528 taurine ABC transporter, permease protein	Probable inner membrane component of binding- protein-dependent transport system	Product confidence : putative Gene name confidence : putative putative taurine uptake ABC transporter permease protein	Taurine transport system permease protein tauC	Taurine ABC transporter, permease protein	Probable inner membrane component of binding- protein-dependent transport system	Taurine ABC transporter, permease protein	Taurine transport system permease protein	taurine transport system permease protein	Residues 1 to 275 of 275 are 99 pct identical to residues 1 to 275 of a 275 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286109.1 taurine transport system permease protein	Putative taurine transport system permease protein	identified by similarity to SP:Q47539 taurine ABC transporter, permease protein	Taurine transport system permease protein	Taurine uptake ABC transporter	ABC taurine transporter, permease subunit	Taurine ABC transporter, permease protein	ABC transporter, permease protein; possible sulfonate/taurine transporter	identified by match to protein family HMM PF00528 taurine ABC transporter, permease protein	identified by match to protein family HMM PF00528 taurine ABC transporter, permease protein	Code: P; COG: COG0600 taurine transport system permease protein	Code: P; COG: COG0600 taurine transport system permease protein	Binding-protein-dependent transport systems inner membrane component	ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit	Code: P; COG: COG0600 taurine transport system permease protein	putative permease component of ABC transporter similarity:fasta; SWALL:TAUC_ECOLI (SWALL:Q47539); Escherichia coli; taurine transport system permease protein TauC; length 275 aa; 251 aa overlap; query 35-284 aa; subject 24-274 aa similarity:fasta; SWALL:Q74Y04 (EMBL:AE017127); Yersinia pestis; putative taurine transport system permease protein; tauc1; length 284 aa; 251 aa overlap; query 34-283 aa; subject 32-282 aa	
ECOLI00350	Alpha-ketoglutarate-dependent taurine dioxygenase	DEHA2D17446p;similar to uniprot|Q12358 Saccharomyces cerevisiae YLL057C JLP1 similar to Fe(II)-dependent sulfonate/alpha- ketoglutarate dioxygenase;	Taurine dioxygenase	Alpha-ketoglutarate-dependent taurine dioxygenase	Alpha-ketoglutarate-dependent taurine dioxygenase	Alpha-ketoglutarate-dependent taurine dioxygenase	go_function: sulfonate dioxygenase activity [goid 0000907]; go_process: sulfur metabolism [goid 0006790] sulfonate dioxygenase, putative	Alpha-ketoglutarate-dependent taurine dioxygenase	Taurine dioxygenase, 2-oxoglutarate-dependent	Residues 1 to 283 of 283 are 99 pct identical to residues 1 to 283 of a 283 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286110.1 taurine dioxygenase, 2-oxoglutarate-dependent	Putative taurine dioxygenase	Similar to alpha-ketoglutarate-dependent taurine dioxygenase	Taurine dioxygenase	Putative taurine dioxygenase	Alpha-ketoglutarate-dependent taurine dioxygenase	identified by similarity to SP:P37610; match to protein family HMM PF02668 alpha-ketoglutarate-dependent taurine dioxygenase	Taurine dioxygenase	Code: Q; COG: COG2175 taurine dioxygenase, 2-oxoglutarate-dependent	2-oxoglutarate-dependent; Code: Q; COG: COG2175 taurine dioxygenase	2-oxoglutarate-dependent; Code: Q; COG: COG2175 taurine dioxygenase	alpha-ketoglutarate-dependent taurine dioxygenase identified by match to protein family HMM PF02668	Alpha-ketoglutarate-dependent taurine dioxygenase	Putative taurine dioxygenase	Alpha-ketoglutarate-dependent taurine dioxygenase	Taurine dioxygenase	alpha-ketoglutarate-dependent taurine dioxygenase identified by match to protein family HMM PF02668	alpha-ketoglutarate-dependent taurine dioxygenase identified by match to protein family HMM PF02668	Putative taurine dioxygenase	TauD	
ECOLI00351	Delta-aminolevulinic acid dehydratase	delta-aminolevulinic acid dehydratase;	Delta-aminolevulinate dehydratase, a homo-octameric enzyme, catalyzes the conversion of delta-aminolevulinic acid to porphobilinogen, the second step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus. [Source:SGD;Acc:S000003008]	similar to sp|P05373 Saccharomyces cerevisiae YGL040c HEM2 porphobilinogen synthase singleton and sp|O42768 Candida glabrata Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH), start by similarity	Delta-aminolevulinic acid dehydratase [Source:GeneDB_Spombe;Acc:SPAC1805.06c]	highly similar to sp|P05373 Saccharomyces cerevisiae YGL040c HEM2 porphobilinogen synthase singleton, start by similarity	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	highly similar to uniprot|P05373 Saccharomyces cerevisiae YGL040c HEM2 porphobilinogen synthase;	Porphobilinogen synthase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	hypothetical delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Porphobilinogen synthase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	Delta-aminolevulinic acid dehydratase	





ECOLI00353	Uncharacterized protein yaiV	Hypothetical protein yaiV	Uncharacterized protein yaiV	Residues 1 to 182 of 182 are 81 pct identical to residues 1 to 222 of a 222 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286113.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yaiV	conserved hypothetical protein	conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative transcriptional regulator, Crp/Fnr family	Predicted DNA-binding transcriptional regulator	Putative uncharacterized protein	Putative transcriptional regulator, Crp/Fnr family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yaiV	Putative uncharacterized protein	Putative uncharacterized protein yaiV	
ECOLI00354	Penicillin-binding protein ampH	Putative beta-lactamase	Penicillin-binding protein 4*	Penicillin-binding protein AmpH	Putative penicillin-binding protein	Possible beta-lactamase	Penicillin-binding protein ampH	Penicillin binding protein 4*	Penicillin-binding protein ampH	Putative uncharacterized protein	BH0715 protein	SCF43A.20c, possible penicillin-binding protein, len: 359 aa; weakly similar to penicillin-binding proteins, carboxypeptidases and beta-lactamases e.g.  SW:AMPH_ECOLI (EMBL:AE000144), AmpH, Escherichia coli penicillin-binding protein (376 aa), fasta scores; opt: 274 z-score: 305.5 E(): 1.1e-09, 26.5% identity in 343 aa overlap, SW:DAC_STRSQ (EMBL:M26842) Streptomyces sp.  D-alanyl-D-alanine carboxypeptidase precursor (406 aa) (23.8% identity in 344 aa overlap) and SW:AMPC_PSEAE (EMBL:X54719), AmpC, Pseudomonas aeruginosa beta-lactamase precursor (397 aa) (27.3% identity in 381 aa overlap).  Weakly similar to others from S. coelicolor e.g. TR:O86739 (EMBL:AL031035) S. coelicolor probable secreted peptidase (386 aa) (26.6% identity in 369 aa overlap) and SCH24.34 (EMBL:AL049826) S. coelicolor possible beta-lactamase (461 aa) (31.4% identity in 325 aa overlap) putative penicillin-binding protein	PENICILLIN-BINDING PROTEIN 4*	Residues 1 to 385 of 385 are 99 pct identical to residues 1 to 385 of a 385 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286114.1 putative enzyme	Putative penicillin-binding protein	Penicillin-binding protein AmpH	Penicillin-binding protein	Putative uncharacterized protein	PROBABLE CONSERVED LIPOPROTEIN	Mb1957, -, len: 371 aa. Equivalent to Rv1922, len: 371 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 371 aa overlap). Probable conserved lipoprotein, possibly peptidase (EC 3.4.-.-) similar to many peptidases, e.g. P15555|DAC_STRSQ D-alanyl-D-alanine carboxypeptidase from Streptomyces sp. (406 aa), FASTA scores: opt: 382, E(): 3.1e-17, (28.0% identity in 379 aa overlap). Also similar to Mycobacterium tuberculosis hypothetical proteins Rv1497, Rv2463, Rv3775, etc.  Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site. PROBABLE CONSERVED LIPOPROTEIN	penicillin-binding protein	similar to Salmonella typhi CT18 penicillin-binding protein AmpH penicillin-binding protein AmpH	Putative uncharacterized protein gbs0640	Beta-lactamase	similar to OMNI:EF0746; identified by sequence similarity; putative lipoprotein, putative	Putative penicillin-binding protein	Penicillin-binding protein	beta-lactamase	

ECOLI00355	Protein sbmA	Bacteroid development protein	Probable ABC-transporter inner membrane protein SbmA	Related to SbmA protein	SbmA protein	similar to GP:8571413, and GP:8571413; identified by sequence similarity; putative bacteroid development protein BacA	putative transport protein, essential for bacteroid development protein	BACTEROID DEVELOPMENT PROTEIN BACA	Protein sbmA	BACTEROID DEVELOPMENT PROTEIN BACA	pseudo	Residues 1 to 408 of 408 are 99 pct identical to residues 1 to 408 of a 408 aa protein from Escherichia coli gb: AAB18100.1 SbmA protein	identified by similarity to SP:P24212; similarity to SP:Q08120 antibiotic transport protein, putative	Undecaprenol kinase protein	putative ABC superfamily transporter	similar to Salmonella typhi CT18 probable ABC-transporter inner membrane protein SbmA probable ABC-transporter inner membrane protein SbmA	similar to BR0372, bacteroid development protein BacA BacA, bacteroid development protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter microcin B17 transport protein (ABC superfamily, atp_bind and membrane)	SbmA protein	Putative ABC superfamily transporter	probable ABC-transporter inner membrane protein SbmA	Code: I; COG: COG1133 sensitivity to microcin B17, possibly envelop protein	bacteroid development protein BacA	sensitivity to microcin B17, possibly envelop protein; Code: I; COG: COG1133 SbmA	ABC transporter-like	possible envelop protein; Code: I; COG: COG1133 sensitivity to microcin B17	putative transmembrane transporter required for bacteroid development similarity:fasta; with=UniProt:BACA_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; bacA; Bacteroid development protein bacA.; length=420; id 57.452; 416 aa overlap; query 1-415; subject 1-413 similarity:fasta; with=UniProt:Q7CXD9_AGRT5 (EMBL:AE008146); Agrobacterium tumefaciens (strain C58/ATCC 33970).; AGR_C_4191p.; length=422; id 76.087; 414 aa overlap; query 1-414; subject 1-412	transporter protein, essential for bacteroid development protein similar to bacA (SMb20999) [Sinorhizobium meliloti] Similar to entrez-protein:Q08120 Putative location:bacterial inner membrane Psort-Score: 0.4482; go_component: integral to membrane [goid 0016021]; go_component: inner membrane [goid 0019866]; go_component: extrachromosomal DNA [goid 0046821]; go_process: transport [goid 0006810]	
ECOLI00356	Uncharacterized protein yaiW	Lipoprotein, putative	Putative uncharacterized protein	Putative lipoprotein	Hypothetical protein yaiW	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein yaiW	Residues 1 to 364 of 364 are 98 pct identical to residues 1 to 364 of a 364 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286116.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative uncharacterized protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	Putative uncharacterized protein	Putative outer membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	identified by similarity to PIR:G83309; match to protein family HMM PF07759 conserved hypothetical protein	identified by match to protein family HMM PF07759 lipoprotein, putative	Protein of unknown function DUF1615	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Protein of unknown function DUF1615	orf conserved hypothetical protein	putative secreted protein	Putative lipoprotein YaiW	conserved hypothetical protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Putative uncharacterized protein yaiW	
ECOLI00357	Inner membrane protein yaiY	Inner membrane protein yaiY	Inner membrane protein yaiY	Residues 1 to 103 of 103 are 99 pct identical to residues 1 to 103 of a 103 aa protein from Escherichia coli K12 gi: 1786577 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YaiY	Putative uncharacterized protein yaiY	conserved hypothetical protein	conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein yaiY	Putative uncharacterized protein	Putative membrane protein	Predicted inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Inner membrane protein YaiY	Inner membrane protein YaiY	
ECOLI00358	Uncharacterized protein yaiZ	Hypothetical protein yaiZ	Putative uncharacterized protein	Residues 1 to 114 of 114 are 96 pct identical to residues 1 to 114 of a 114 aa protein from Escherichia coli K12 ref: NP_414914.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YaiZ	Putative uncharacterized protein yaiZ	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yaiZ	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00359	D-alanine--D-alanine ligase A	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase A	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase A	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase B	D-alanine--D-alanine ligase	putative D-alanine-D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase A	D-alanine--D-alanine ligase	identified by match to protein family HMM PF01820; match to protein family HMM TIGR01205 D-alanine--D-alanine ligase	similar to GB:X04366, SP:P07384, and PID:29664; identified by sequence similarity; putative D-alanine--D-alanine ligase A	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	D-alanine--D-alanine ligase	
ECOLI00360	Anti-adapter protein iraP	Hypothetical protein yaiB	Anti-adapter protein iraP	Residues 1 to 86 of 86 are 98 pct identical to residues 1 to 86 of a 86 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286120.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Anti-adapter protein iraP	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Anti-adapter protein iraP	Anti-adapter protein iraP	conserved hypothetical protein	conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yaiB	Putative uncharacterized protein	Putative uncharacterized protein	Anti-adaptor protein	Putative uncharacterized protein	Anti-adapter protein iraP	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative cytoplasmic protein	
ECOLI00361	Alkaline phosphatase	Alkaline phosphatase	Alkaline phosphatase III	Alkaline phosphatase H	Alkaline phosphatase	Alkaline phosphatase	identified by match to protein family HMM PF00245 alkaline phosphatase	similar to SP:P00634; identified by sequence similarity; putative alkaline phosphatase	alkaline phosphatase	Alkaline phosphatase family protein	ALKALINE PHOSPHATASE	Alkaline phosphatase	similar to Y18016-1|CAB82508.1| percent identity: 26 in 388 aa putative alkaline phosphatase	Residues 1 to 494 of 494 are 98 pct identical to residues 1 to 494 of a 494 aa protein from Escherichia coli K12 ref: NP_414917.1 alkaline phosphatase	Alkaline phosphatase	Alkaline phosphatase	alkaline phosphatase	similar to BR1200, alkaline phosphatase PhoA, alkaline phosphatase	Alkaline phosphatase	Similar to Bacillus subtilis alkaline phosphatase IV precursor PhoA or PhoAIV SWALL:PPB4_BACSU (SWALL:P19406) (461 aa) fasta scores: E(): 6.4e-29, 33.76% id in 459 aa, and to Bacteroides thetaiotaomicron alkaline phosphatase III precursor BT3708 SWALL:AAO78813 (EMBL:AE016941) (467 aa) fasta scores: E(): 2.4e-144, 81.15% id in 467 aa, and to Bacillus subtilis alkaline phosphatase III precursor PhoB or PhoAIII SWALL:PPB3_BACSU (SWALL:P19405) (462 aa) fasta scores: E(): 3.9e-28, 33.99% id in 456 aa putative alkaline phosphatase	identified by similarity to GP:28738; match to protein family HMM PF00245 alkaline phosphatase family protein	Alkaline phosphatase	Code: P; COG: COG1785 alkaline phosphatase	Alkaline phosphatase	Alkaline phosphatase	Evidence 2b : Function of strongly homologous gene; Product type e : enzyme secreted alkaline phosphatase	Code: P; COG: COG1785 alkaline phosphatase	alkaline phosphatase identified by match to protein family HMM PF00245	alkaline phosphatase, liver/bone/kidney [Source:HGNC Symbol;Acc:438]	
ECOLI00362	Phosphate starvation-inducible protein psiF	Putative exported protein	Phosphate starvation-inducible protein psiF precursor	Phosphate starvation-inducible protein	Phosphate starvation-inducible protein	Phosphate starvation-inducible protein PsiF	Phosphate starvation-inducible protein	Phosphate starvation-inducible protein	Induced by phosphate starvation	Residues 1 to 113 of 113 are 97 pct identical to residues 1 to 113 of a 113 aa protein from Escherichia coli K12 gi: 1786583 induced by phosphate starvation	Putative starvation-inducible protein	induced by phosphate starvation	similar to Salmonella typhi CT18 phosphate starvation-inducible protein PsiF phosphate starvation-inducible protein PsiF	Putative starvation-inducible protein	Phosphate starvation-inducible protein, PSIF	Induced by phosphate starvation	identified by similarity to SP:P27295; match to protein family HMM PF07769 phosphate starvation-inducible protein PsiF	identified by match to protein family HMM PF07769 phosphate starvation-inducible protein PsiF	PsiF	hypothetical protein	induced by phosphate starvation	induced by phosphate starvation PsiF	PsiF	PsiF repeat protein	induced by phosphate starvation	PsiF precursor	phosphate starvation-inducible protein identified by match to protein family HMM PF07769	Phosphate starvation-inducible protein PsiF	Putative starvation-inducible protein precursor	
ECOLI00363	Protein adrA	Alr3504 protein	Putative membrane protein	Hypothetical protein yaiC	identified by match to PFAM protein family HMM PF03772 GGDEF domain protein	GGDEF family protein	Putative signaling membrane protein	GGDEF domain protein	Putative uncharacterized protein yaiC	Residues 1 to 371 of 371 are 98 pct identical to residues 1 to 371 of a 371 aa protein from Escherichia coli K12 ref: NP_414919.1 orf, conserved hypothetical protein	Uncharacterized membrane protein SAV0746	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 GGDEF domain protein	Hypothetical protein SE0528	IPR000160: GGDEF putative diguanylate cyclase/phosphodiesterase domain 1	similar to Salmonella typhi Ty2 adrA protein adrA protein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0800 putative membrane protein	conserved hypothetical protein	YaiC/YhcK/ArdA family protein	Putative diguanylate cyclase/phosphodiesterase domain 1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 GGDEF domain protein	GGDEF	Similar to Bacillus subtilis hypothetical protein YhcK SW:YHCK_BACSU (P54595) (359 aa) fasta scores: E(): 1.8e-19, 27.901% id in 362 aa, and to Deinococcus radiodurans GGDEF family protein DR1090 TR:Q9RVD9 (EMBL:AE001959) (356 aa) fasta scores: E(): 1.7e-13, 26.158% id in 367 aa putative membrane protein	conserved hypothetical protein	identified by match to protein family HMM PF00990; match to protein family HMM PF07694; match to protein family HMM TIGR00254 GGDEF domain protein	similar to gi|27467446|ref|NP_764083.1| [Staphylococcus epidermidis ATCC 12228], percent identity 75 in 356 aa, BLASTP E(): e-153 conserved hypothetical protein	Code: T; COG: COG2199 conserved hypothetical protein	Putative diguanylate cyclase (GGDEF domain)	GGDEF domain protein identified by match to protein family HMM PF00990; match to protein family HMM PF07694; match to protein family HMM TIGR00254	
ECOLI00364	Pyrroline-5-carboxylate reductase	hypothetical protein;similar to delta-1-pyrroline-5-carboxylate reductase;	Delta 1-pyrroline-5-carboxylate reductase, catalyzes the last step in proline biosynthesis.  [Source:SGD;Acc:S000000825]	similar to sp|Q12740 Zalerion arboricola Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase), start by similarity	Delta 1-pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase [Source:GeneDB_Spombe;Acc:SPAPYUG7.05]	similar to sp|P32263 Saccharomyces cerevisiae YER023w PRO3 delta 1-pyrroline-5-carboxylate reductase singleton, start by similarity	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	pyrroline carboxylate reductase	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	highly similar to uniprot|P32263 Saccharomyces cerevisiae YER023w PRO3 delta 1-pyrroline-5-carboxylate reductase;	DEHA2F06182p;similar to uniprot|P32263 Saccharomyces cerevisiae YER023W PRO3 Delta 1-pyrroline-5-carboxylate reductase catalyzes the last step in proline biosynthesis;	1-pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase related protein	Pyrroline-5-carboxylate reductase	hypothetical pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	Delta 1-pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase	
ECOLI00365	UPF0178 protein yaiI	UPF0178 protein GSU0171	UPF0178 protein XCC2288	UPF0178 protein EF_0842	UPF0178 protein CC_1215	UPF0178 protein PA5247	UPF0178 protein VV2566	UPF0178 protein Atu1478	UPF0178 protein yaiI	UPF0178 protein BA_3063/GBAA_3063/BAS2849	UPF0178 protein DP1304	UPF0178 protein Lmo1456	UPF0178 protein BC_3040	UPF0178 protein BT9727_2823	conserved hypothetical protein	UPF0178 protein Bd1212	UPF0178 protein yaiI	identified by match to protein family HMM PF02639 yaiI/yqxD family protein	identified by match to PFAM protein family HMM PF02639 YaiI/YqxD family protein	UPF0178 protein VC_0881	UPF0178 protein BB1267	UPF0178 protein SO_2894	UPF0178 protein TP_0845	UPF0178 protein ECA0873	best DB hits: BLAST: pir:A82990; conserved hypothetical protein PA5247 [imported] -; E=2e-27 swissprot:P52089; YPAH_PSELE HYPOTHETICAL 21.7 KD PROTEIN IN PAHZ1; E=3e-26 pir:C64767; yaiI protein - Escherichia coli ----- gb:; E=4e-26 COG: PA5247; COG1671 Uncharacterized BCR; E=2e-28 PFAM: PF02639; Uncharacterized BCR, YaiI/YqxD; E=7e-46 conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	UPF0178 protein CTC_02403	UPF0178 protein BPP1051	UPF0178 protein BMEI0088	
ECOLI00366	Shikimate kinase 2	Shikimate kinase	Shikimate kinase 2	Shikimate kinase 2	Shikimate kinase	Shikimate kinase	Shikimate kinase 2	PMID: 3026317 PMID: 3001025 PMID: 9278503 best DB hits: BLAST: swissprot:P08329; AROL_ECOLI SHIKIMATE KINASE II (SKII) -----; E=2e-22 swissprot:P34003; AROK_PSEAE SHIKIMATE KINASE (SK) ----- pir:; E=4e-20 swissprot:P72796; AROK_SYNY3 SHIKIMATE KINASE (SK) ----- pir:; E=4e-20 COG: aroL; COG0703 Shikimate kinase; E=2e-23 PFAM: PF01583; Adenylylsulfate kinase; E=0.014 PF00005; ABC transporter; E=0.059 PF00910; RNA helicase; E=0.016 Shikimate kinase II	Shikimate kinase	Shikimate kinase 2	Shikimate kinase	Residues 1 to 155 of 155 are 99 pct identical to residues 20 to 174 of a 174 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286126.1 shikimate kinase II	Shikimate kinase 2	Shikimate kinase 2	IPR000623: Shikimate kinase shikimate kinase II	similar to Salmonella typhi CT18 shikimate kinase II shikimate kinase II	Shikimate kinase 2	Shikimate kinase 2	Code: E; COG: COG0703 shikimate kinase II	Code: E; COG: COG0703 shikimate kinase II	shikimate kinase II	Code: E; COG: COG0703 shikimate kinase II	Shikimate kinase 2	Shikimate kinase II	Shikimate kinase 2	shikimate kinase	shikimate kinase	Shikimate kinase	Shikimate kinase II	
ECOLI00367	Uncharacterized protein yaiA	Hypothetical protein yaiA	Uncharacterized protein yaiA	Residues 1 to 63 of 63 are 100 pct identical to residues 1 to 63 of a 63 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286127.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yaiA	conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yaiA	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00368	Protein aroM	217aa long hypothetical aroM protein	AroM protein	AroM protein	Protein of aro operon, regulated by aroR	Residues 1 to 225 of 225 are 100 pct identical to residues 1 to 225 of a 225 aa protein from Escherichia coli K12 ref: NP_414924.1 protein of aro operon, regulated by aroR	conserved hypothetical protein	protein of aro operon, regulated by aroR	similar to Salmonella typhimurium protein of aro operon, regulated by aroR protein of aro operon, regulated by aroR	Protein of aro operon, regulated by aroR	protein of aro operon, regulated by aroR	protein of aro operon, regulated by aroR AroM	regulated by aroR protein of aro operon	AroM protein	AroM protein, regulated by AroR	AroM	protein of aro operon, regulated by aroR	AroM protein	protein of aro operon, regulated by aroR	AroM protein	AroM family protein	Protein of aro operon, regulated by aroR	Putative uncharacterized protein	AroM protein	AroM family protein	AroM family protein	Conserved protein	AroM protein	AroM family protein	
ECOLI00369	UPF0345 protein yaiE	UPF0345 protein PA1574	UPF0345 protein VVA0047	UPF0345 protein LA_0973	UPF0345 protein yaiE	conserved hypothetical protein	UPF0345 protein yaiE	UPF0345 protein VC_A0970	UPF0345 protein SO_4467	UPF0345 protein ECA1104	best DB hits: BLAST: pir:D83447; conserved hypothetical protein PA1574 [imported] -; E=5e-21 swissprot:P36768; YAIE_ECOLI HYPOTHETICAL 10.2 KD PROTEIN IN; E=2e-15 pir:A82395; conserved hypothetical protein VCA0970 [imported] -; E=4e-11 COG: PA1574; COG3123 Uncharacterized BCR; E=5e-22 conserved hypothetical protein	UPF0345 protein PSPTO_2022	UPF0345 protein WS0164	UPF0345 protein NFA_15710	UPF0345 protein VPA0057	UPF0345 protein yaiE	UPF0345 protein VV2_1219	UPF0345 protein LIC_12681	Residues 1 to 94 of 94 are 100 pct identical to residues 1 to 94 of a 94 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286129.1 orf, conserved hypothetical protein	UPF0345 protein YPO3213/y0973/YP_0722	UPF0345 protein RSc2552	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0345 protein YPTB0912	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	UPF0345 protein MCA1207	hypothetical cytosolic protein	UPF0345 protein PP_4248	UPF0345 protein yaiE	
ECOLI00370	Putative uncharacterized protein ykiA	Putative uncharacterized protein	Residues 1 to 93 of 93 are 96 pct identical to residues 1 to 93 of a 93 aa protein from Escherichia coli K12 ref: NP_414926.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ykiA	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ykiA	Putative uncharacterized protein ykiA	Putative uncharacterized protein ykiA	Putative uncharacterized protein ykiA	Predicted protein	YkiA protein	Predicted protein	
ECOLI00371	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	hypothetical recombination associated protein RdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination associated protein	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Residues 3 to 327 of 327 are 99 pct identical to residues 1 to 325 of a 325 aa protein from Escherichia coli gb: AAB18117.1 orf, conserved hypothetical protein	Recombination-associated protein rdgC	Putative recombination associated protein rdgC	Recombination-associated protein rdgC	Recombination-associated protein rdgC	Similar to recombinaison associated protein RdgC hypothetical protein	conserved gene exonuclease involved in removal of stalled replication fork	Similar to recombinaison associated protein RdgC hypothetical protein	Recombination associated protein RdgC	
ECOLI00372	Fructokinase	ROK family protein	Putative uncharacterized protein	Hypothetical ROK-family protein	hypothetical ROK family protein	Glucokinase	Hypothetical protein	ROK family protein	ROK family protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein yajF	CDS_ID OB2757 polyketide synthase	Residues 1 to 348 of 348 are 98 pct identical to residues 1 to 348 of a 348 aa protein from Escherichia coli K12 ref: NP_414928.1 possible NAGC-like transcriptional regulator	Putative uncharacterized protein	IPR000600: ROK family putative sugar kinase/putative transcriptional regulator (NagC/XylR familiy)	similar to Salmonella typhi CT18 hypothetical ROK-family protein hypothetical ROK-family protein	Putative sugar kinase/putative transcriptional regulator (NagC/XylR	ROK family protein	Putative sugar kinase/putative transcriptional regulator	Putative sugar kinase/putative transcriptional regulator	ROK	Code: KG; COG: COG1940 possible NAGC-like transcriptional regulator	ROK	ROK family protein	Code: KG; COG: COG1940 possible NAGC-like transcriptional regulator	ROK	Putative sugar kinase/putative transcriptional regulator	Transcriptional regulator/sugar kinase	
ECOLI04326	Protein traP	Conjugal transfer protein TraP	Conjugative transfer protein precursor	TraP conjugal transfer protein; similar to AAO49522; identified by match to protein family HMM PF07296	Type IV secretion-like conjugative transfer system protein TraP	Putative conjugal transfert protein	Putative conjugal transfert protein TraP	
ECOLI00373	Protein araJ	AraJ-like protein probably involved in transport of arabinose polymers	pseudo	Protein araJ	Involved in either transport or processing of arabinose polymers	Putative to nasA protein	Residues 21 to 425 of 425 are 98 pct identical to residues 1 to 406 of a 406 aa protein from Escherichia coli gb: AAB18120.1 protein AraJ precursor	IPR007114: Major facilitator superfamily MFS family, arabinose polymer transporter	similar to Salmonella typhimurium MFS family, arabinose polymer transporter MFS family, arabinose polymer transporter	MFS family, arabinose polymer transporter	putative transport transmembrane protein	putative transmembrane transport protein	Code: G; COG: COG2814 protein involved in either transport or processing of arabinose polymers	involved in either transport or processing of arabinose polymers; Code: G; COG: COG2814 AraJ	major facilitator superfamily MFS_1	Putative sugar transport protein AraJ	Putative transmembrane efflux protein	AraJ MFS transporter	major facilitator superfamily permease-possibl y arabinose polymer transporter	AraJ-like protein probably involved in transport of arabinose polymers COG family: arabinose efflux permease Orthologue of BL1652 PFAM_ID:sugar_tr	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: ftf:FTF0444 multidrug transporter (tetracycline resistance protein)	Putative permease	involved in either transport or processing of arabinose polymers Code: G; COG: COG2814	AraJ MFS transporter	Putative transmembrane efflux protein	Putative transmembrane efflux protein	Major facilitator family transporter	Probable sugar efflux transporter, MFS superfamily	Major facilitator superfamily MFS_1	
ECOLI00374	Nuclease sbcCD subunit C	Exonuclease SBCC	DNA double-strand break repair rad50 ATPase	Slr1048 protein	DEHA2A12056p;weakly similar to uniprot|Q06704 Saccharomyces cerevisiae YLR309C IMH1 Protein involved in vesicular transport;	DNA double-strand break repair rad50 ATPase	DNA double-strand break repair rad50 ATPase	ATP-dependent exonuclease sbcC	Exonuclease SbcC	Putative ATP-dependent dsDNA exonuclease	Probable DNA double-strand break repair rad50 ATPase	DNA double-strand break repair rad50 ATPase	Probable exonuclease	Exonuclease SbcC	Nuclease sbcCD subunit C	Probable DNA double-strand break repair rad50 ATPase	Putative exonuclease SbcC	Nuclease sbcCD subunit C	Putative uncharacterized protein	Exonuclease SbcC	Alr3988 protein	Putative exonuclease	Related to ATP-dependent dsDNA exonuclease	Lmo1645 protein	ATP-dependent exonuclease SbcC	hypotehtical exonuclease	Exonuclease SbcC	Exonuclease sbcC	identified by match to protein family HMM TIGR01612 exonuclease, putative	
ECOLI00375	Nuclease sbcCD subunit D	Exonuclease SbcD	Putative ATP-dependent dsDNA exonuclease	ATP-dependent dsDNA exonuclease	Probable exonuclease	Exonuclease SbcD	Exonuclease SbcD	Exonuclease, putative	DNA repair exonuclease	Exonuclease SbcD, putative	Exonuclease SbcD	Putative exonuclease SbcD	Related to ATP-dependent dsDNA exonuclease	Lmo1646 protein	Putative exonuclease	Exonuclease SbcD	Exonuclease SbcD	hypothetical exonuclease SbcD	Nuclease sbcCD subunit D	Nuclease sbcCD subunit D	Exonuclease SbcD, putative	Exonuclease SbcD, putative	Exonuclease, putative	Exonuclease subunit D	DNA repair exonuclease	Exonuclease sbcD	Exonuclease SbcD	DNA repair exonuclease	Putative ATP-dependent dsDNA exonuclease	
ECOLI00376	Phosphate regulon transcriptional regulatory protein phoB	Two-component system regulatory protein	PhoB	Phosphate regulon transcriptional regulatory protein phoB	DNA-binding response regulator PhoB	Phosphate regulon transcriptional regulatory protein PhoB	Phosphate regulon two-component system response regulator	putative DNA-binding response regulator PhoB	Phosphate regulon transcriptional Regulatory protein phoB	DNA-binding response regulator PhoB	Phosphate regulon transcriptional regulatory protein	Phosphate regulon transcriptional regulatory protein	Phosphate regulon response regulator PhoB	Phosphate regulon response regulator	Phosphate regulon transcriptional regulatory protein PhoB	Phosphate regulon transcriptional regulatory protein	DNA-binding response regulator PhoB	DNA-binding response regulator PhoB	Phosphate regulon transcriptional regulatory protein phoB	Phosphate regulon transcriptional regulatory protein	Response regulator	Residues 1 to 229 of 229 are 99 pct identical to residues 1 to 229 of a 229 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286137.1 positive response regulator for pho regulon, sensor is PhoR (or CreC)	Phosphate regulon transcriptional regulatory protein	Phosphate regulon transcriptional regulatory protein	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response regulator in two-component regulatory system with PhoR (or CreC), regulates pho regulon (OmpR family)	similar to Salmonella typhi CT18 phosphate regulon transcriptional regulatory protein PhoB phosphate regulon transcriptional regulatory protein PhoB	Response regulator in two-component regulatory system with PhoR (Or CreC), regulates Pi uptake	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator positive response regulator for the pho regulon,autophosphorylates and phosphorylates sensor PhoR	phosphate regulon transcriptional regulatory protein PhoB	
ECOLI00377	Phosphate regulon sensor protein phoR	Sensor protein	Sensor protein	Sensor protein	Phosphate regulon sensor protein phoR	Sensor protein	Sensor protein	Sensor protein	Phosphate regulon sensor protein phoR	Sensor protein	Sensor protein	Sensor protein	Two-component sensor histidine kinase	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	putative histidine protein kinase PhoR	Phosphate regulon sensor protein phoR	Sensor protein	identified by similarity to SP:P16497; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229 sporulation kinase A	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	PMID: 8346225 PMID: 9278503 best DB hits: BLAST: embl:CAB64771.1; (AJ007794) kin1 [Bacillus cereus] -----; E=3e-20 gb:AAD47812.1; (AF163841) putative histidine protein kinase; E=1e-19 pir:G82495; probable C4-dicarboxylate transport sensor protein; E=7e-19 COG: VCA0141; COG0642 Sensory transduction histidine kinases; E=7e-20 PFAM: PF00989; PAS domain; E=0.031 PF00785; PAC motif; E=1.5e-10 PF00512; His Kinase A (phosphoacceptor) doma; E=1.3e-12 sensor protein atoS	
ECOLI00378	Branched-chain amino acid transport system 2 carrier protein	Branched-chain amino acid transport system 3 carrier protein	Branched-chain amino acid transport system 2 carrier protein	Branched-chain amino acid transport system carrier protein	Branched-chain amino acid transport system carrier protein	Branched-chain amino acid transport system II carrier protein	identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796 branched-chain amino acid transport system II carrier protein	Branched-chain amino acid transport system II carrier protein	Branched-chain amino acid transport system II carrier protein	Branched-chain amino acid transport system 2 carrier protein	Residues 1 to 439 of 439 are 99 pct identical to residues 1 to 439 of a 439 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286139.1 branched chain amino acid transport system II carrier protein	Branched-chain amino acid transport system II carrier protein	BrnQ protein	Branched chain amino acid transport system II carrier protein	InterProMatches:IPR004685; Biological Process: branched-chain aliphatic amino acid transport (GO:0015803), Cellular Component: integral to membrane (GO:0016021) branched-chain amino acid transporter	LIVCS family, branched chain amino acid transporter system II (LIV-II)	similar to Salmonella typhi CT18 branched chain amino acid transport system II carrier protein branched chain amino acid transport system II carrier protein	Putative uncharacterized protein gbs1683	hypothetical protein, similar to branched-chain amino acid transport system carrier protein	identified by match to TIGR protein family HMM TIGR00796 branched-chain amino acid transport system II carrier protein	LIVCS family, branched chain amino acid transporter system II	Ortholog of S. aureus MRSA252 (BX571856) SAR0187 putative branched-chain amino acid transport system carrier protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter branched chain amino acid transporter	Branched-chain amino acid transport system III carrier protein	Branched-chain amino acid transport system 2 carrier protein	identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796 branched-chain amino acid transport system II carrier protein	identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796 branched-chain amino acid transport system II carrier protein	Branched-chain amino acid transport system II carrier protein	Similar to Lactobacillus delbrueckii branched-chain amino acid transport system carrier protein BrnQ SW:BRNQ_LACDL (P54104) (446 aa) fasta scores: E(): 1.5e-65, 46.347% id in 438 aa, and to Bacillus subtilis branched-chain amino acid transport system carrier protein BrnQ SW:BRNQ_BACSU (P94499) (440 aa) fasta scores: E(): 4.7e-62, 44.196% id in 448 aa putative branched-chain amino acid transport system carrier protein	
ECOLI00379	Proline-specific permease proY	Proline-specific permease ProY	Gamma-aminobutyrate permease and related permeases	Proline-specific permease proY	Proline-specific permease	Proline-specific permease proY	similar to AX067029-1|CAC26742.1| percent identity: 89 in 463 aa putative amino acid permease	Residues 2 to 458 of 458 are 99 pct identical to residues 1 to 457 of a 457 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286140.1 proline permease transport protein	Probable proline-specific permease	amino acid permease	IPR002293: Amino acid/polyamine transporter, family I; IPR002422: Amino acid/polyamine transporter, family II; IPR004840: Amino acid permease putative APC family, proline transporter	similar to Salmonella typhi CT18 proline-specific permease ProY proline-specific permease ProY	Amino acid permease	Probable APC family, proline transporter	Proline-specific permease proY	go_component: integral to plasma membrane [goid 0005887]; go_function: general amino acid permease activity [goid 0005281]; go_process: amino acid transport [goid 0006865] amino-acid permease	identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG0531; TC:2.A.3.6.1 putative amino acid permease	identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG0531; TC:2.A.3.6.1 amino acid permease	identified by match to protein family HMM PF00324 proline-specific permease proY	Code: E; COG: COG1113 proline permease transport protein	Code: E; COG: COG1113 proline permease transport protein	Code: E; COG: COG1113 proline permease transport protein	Proline-specific permease ProY	Proline-specific permease precursor	Proline-specific permease ProY	Proline-specific permease precursor	Probable proline-specific permease precursor	Hypothetical protein	proline permease transport protein Code: E; COG: COG1113	
ECOLI00380	Maltodextrin glucosidase	Neopullulanase	Amylopullulanase	Cyclomaltodextrinase, putative	Glycosidase	Maltodextrin glucosidase	Maltodextrin glucosidase	Neopullulanase	Alpha-amylase	Neopullulanase	putative maltodextrin glucosidase	Maltodextrin glucosidase	neopullulanase	Putative maltodextrin glucosidase	Maltodextrin glucosidase	Maltogenic amylase	Glycosidases	Residues 1 to 605 of 605 are 98 pct identical to residues 1 to 605 of a 605 aa protein from Escherichia coli K12 ref: NP_414937.1 maltodextrin glucosidase	Putative maltodextrin glucosidase	cyclomaltodextrinase	Alpha-amylase	maltogenic amylase	amylopullulanase	Putative maltodextrin glucosidase	Amylopullulanase	maltodextrin glucosidase	similar to Salmonella typhi CT18 maltodextrin glucosidase maltodextrin glucosidase	Putative maltodextrin glucosidase category	Neopullulanase/cyclomaltodextrinase/maltogenic alpha-amylase	
ECOLI00381	Acyl carrier protein phosphodiesterase	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Acyl carrier protein phosphodiesterase	hypothetical protein	Acyl carrier protein phosphodiesterase	Putative uncharacterized protein	Putative uncharacterized protein	Acyl carrier protein phosphodiesterase	Putative uncharacterized protein	Putative uncharacterized protein VPA0844	Acyl carrier protein phosphodiesterase	Uncharacterized protein conserved in bacteria	Residues 1 to 143 of 143 are 98 pct identical to residues 51 to 193 of a 193 aa protein from Escherichia coli K12 ref: NP_414938.1 putative glycoprotein	Acyl carrier protein phosphodiesterase	Acyl carrier protein phosphodiesterase	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Acyl carrier protein phosphodiesterase	Putative uncharacterized protein	Acyl carrier protein phosphodiesterase	conserved hypothetical protein	identified by similarity to GB:AAN66547.1; match to protein family HMM PF04336 conserved hypothetical protein	identified by similarity to GB:AAN66547.1; match to protein family HMM PF04336 conserved hypothetical protein	Protein of unknown function DUF479	Code: S; COG: COG3124 putative glycoprotein	Putative uncharacterized protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3124 putative glycoprotein	
ECOLI00382	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	Queuosine biosynthesis protein	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	S-adenosylmethionine:tRNA ribosyltransferase- isomerase	
ECOLI00383	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	7-cyano-7-deazaguanine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	QUEUINE tRNA RIBOSYLTRANSFERASE;06_0310, QUEUINE tRNA RIBOSYLTRANSFERASE, TGT_DROME, gene found by Glimmer;	Queuine tRNA-ribosyltransferase	similar to SP:P24011, GB:X54140, PID:39869, PID:2339992,  and GB:AL009126; identified by sequence similarity; putative queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	Queuine tRNA-ribosyltransferase	
ECOLI00384	UPF0092 membrane protein yajC	Protein translocase subunit YajC	Preprotein translocase YajC subunit	Preprotein translocase YajC subunit	UPF0092 membrane protein HI0241	Putative uncharacterized protein	UPF0092 membrane protein aq_1254	Preprotein translocase, YajC subunit	Putative uncharacterized protein	YajC	Putative uncharacterized protein	Putative preprotein translocase protein	UPF0092 membrane protein TM_0859	Preprotein translocase, YajC subunit	Putative uncharacterized protein	Preprotein tranlocase protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Preprotein translocase, YajC subunit	conserved hypothetical protein	Preprotein translocase YajC subunit	UPF0092 membrane protein yajC	similar to SP:Q9ZG87, and SP:Q9ZG87; identified by sequence similarity; putative preprotein translocase, YajC subunit	Putative uncharacterized protein	Putative secreted protein	Putative secreted protein	Preprotein translocase, YajC subunit	Putative membrane subunit of preprotein translocase	
ECOLI00385	Protein-export membrane protein secD	Protein translocase subunit SedD	Protein-export membrane protein SecD	Protein-export membrane protein SecD	Protein-export membrane protein	Protein-export membrane protein secD	Putative preprotein translocase SecD subunit	Protein-export membrane protein secD	Preprotein translocase subunit	Protein-export membrane protein SecD	Protein-export membrane protein secD	Protein-export membrane protein SecD	SecD	Protein-export membrane protein secD	Protein-export membrane protein	Preprotein translocase subunit SecD	Preprotein translocase subunit SecD	Protein-export membrane protein SecD	Putative uncharacterized protein secD	Protein-export membrane protein SecD	putative protein-export membrane protein SecD	Protein-export membrane protein secD	SecD, protein-export membrane protein	Protein-export membrane protein secD	Protein-export membrane protein SecD	Protein-export membrane protein SecD	Protein-export membrane protein secD	Protein-export membrane protein	Protein-export membrane protein	
ECOLI00386	Protein-export membrane protein secF	Protein translocase subunit secF	Uncharacterized membrane protein MJ1253	Protein-export membrane protein SecF	Protein-export membrane protein SecF	Protein-export membrane protein secF	Protein-export membrane protein	Protein-export membrane protein secF	Protein-export membrane protein, SecF	Putative preprotein translocase SecF subunit	Protein-export membrane protein secF	Protein-export membrane protein	Protein-export membrane protein SecF	Protein-export membrane protein secF	Protein-export membrane protein SecF	SecF	Protein-export membrane protein secF	Protein-export membrane protein	Protein-export membrane protein SecF, putative	Preprotein translocase subunit SecF	Protein-export membrane protein SecF	Protein-export membrane protein	Preprotein translocase subunit SecF	Protein-export membrane protein secF	Putative uncharacterized protein secF	Protein-export membrane protein SecF	Putative preprotein translocase subunit SecF	Protein-export membrane protein secF	Protein-export membrane protein SecF	
ECOLI00387	Uncharacterized protein yajD	Conserved hypothetical protein	Hypothetical protein yajD	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein yajD	Residues 1 to 115 of 115 are 100 pct identical to residues 1 to 115 of a 115 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286151.1 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR000345: Cytochrome c heme-binding site putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Uncharacterized protein yajD	identified by similarity to SP:P40777 conserved hypothetical protein	identified by match to protein family HMM PF01844 conserved hypothetical protein	HNH endonuclease	HNH endonuclease	Code: V; COG: COG1403 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: V; COG: COG1403 conserved hypothetical protein	conserved hypothetical protein	HNH endonuclease	Code: V; COG: COG1403; orf conserved hypothetical protein	Putative uncharacterized protein	HNH endonuclease	HNH endonuclease	Hypothetical protein	HNH nuclease	
ECOLI00388	Nucleoside-specific channel-forming protein tsx	Nucleoside-specific channel-forming protein tsx	Nucleoside-specific channel-forming protein tsx	Outer membrane protein OmpK	Outer membrane protein OmpK, putative	Nucleoside-specific channel-forming protein	Nucleoside-specific channel-forming protein	Outer membrane protein ompK	Nucleoside-specific channel-forming protein tsx	Outer membrane protein OmpK	Residues 17 to 310 of 310 are 100 pct identical to residues 1 to 294 of a 294 aa protein from Escherichia coli O157:H7 ref: NP_308491.1 nucleoside-specific channel-forming protein TSX	IPR003055: Nucleoside-specific channel-forming protein, Tsx nucleoside channel; receptor of phage T6 and colicin K	similar to Salmonella typhi CT18 nucleoside-specific channel-forming protein tsx precursor nucleoside-specific channel-forming protein tsx precursor	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter nucleoside-specific channel-forming protein	Nucleoside-specific channel-forming protein tsx	identified by match to protein family HMM PF03502 nucleoside-specific channel-forming protein	identified by match to protein family HMM PF03502 nucleoside-specific channel-forming protein	Nucleoside-specific channel-forming protein, Tsx	receptor of phage T6 and colicin K; Code: M; COG: COG3248 nucleoside channel	nucleoside channel; receptor of phage T6 and colicin K; Code: M; COG: COG3248 Tsx	nucleoside-specific channel-forming protein, Tsx	Nucleoside-specific channel-forming protein, Tsx	Nucleoside-binding outer membrane protein COG3248	receptor of phage T6 and colicin K; Code: M; COG: COG3248 nucleoside channel	Nucleoside-specific channel-forming protein tsx	Nucleoside-specific channel-forming protein, Tsx precursor	Nucleoside-specific channel-forming protein, Tsx precursor	Nucleoside channel; receptor of phage T6 and colicin K	outer membrane protein identified by match to protein family HMM PF03502	
ECOLI00389	Uncharacterized lipoprotein yajI	Hypothetical lipoprotein yajI	Putative lipoprotein	Putative uncharacterized protein yajI	Residues 1 to 199 of 199 are 99 pct identical to residues 1 to 199 of a 199 aa protein from Escherichia coli K12 ref: NP_414946.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative outer membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical lipoprotein YajI	Hypothetical lipoprotein YajI	conserved hypothetical protein	conserved hypothetical lipoprotein YajI	Lipoprotein precursor	Hypothetical lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein precursor	Predicted lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	
ECOLI00390	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	identified by match to PFAM protein family HMM PF03477 hypothetical protein	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Putative transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	Transcriptional repressor nrdR	
ECOLI00391	Riboflavin biosynthesis protein ribD	Riboflavin biosynthesis protein RibD	Riboflavin-specific deaminase	Riboflavin-specific deaminase/5-amino-6-uracil reductase	Riboflavin biosynthesis protein ribD	identified by match to TIGR protein family HMM TIGR01508 riboflavin-specific deaminase	Riboflavin biosynthesis protein ribD	Riboflavin biosynthesis protein RibD	Riboflavin biosynthesis protein ribD	Putative uncharacterized protein	Putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5 -amino-6-(5-phosphoribosylamino)uracil reductase	Riboflavin biosynthesis protein	Riboflavin biosynthesis protein RibD	RibD	Riboflavin-specific deaminase/reductase	Pyrimidine reductase	Riboflavin-specific deaminase	Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase	Riboflavin biosynthesis protein RibD	Riboflavin biosynthesis protein RibD	Probable riboflavin biosynthesis protein	Pyrimidine reductase, riboflavin biosynthesis	Putative bifunctional riboflavin-specific deaminase/reductase	Riboflavin biosynthesis protein RibD	Diaminohydroxyphosphoribosylaminopyrimidine deaminase	Riboflavin biosynthesis protein	Multifunctional riboflavin biosynthetic protein [deaminase, reductase	Riboflavin biosynthesis protein RibD	Putative pyrimidine deaminase/pyrimidine reductase	
ECOLI00392	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase;	Lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, also known as DMRL synthase); catalyzes synthesis of immediate precursor to riboflavin.  [Source:SGD;Acc:S000005503]	similar to sp|P50861 Saccharomyces cerevisiae YOL143c RIB4 6,7-dimethyl -8-ribityllumazine synthase, hypothetical start	6,7-dimethyl-8-ribityllumazine synthase [Source:GeneDB_Spombe;Acc:SPBC409.13]	highly similar to sp|P50861 Saccharomyces cerevisiae YOL143c RIB4 6, 7-dimethyl-8-ribityllumazine synthase singleton, start by similarity	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	highly similar to uniprot|P50861 Saccharomyces cerevisiae YOL143c RIB4 6 7-dimethyl-8-ribityllumazine synthase;	6,7-dimethyl-8-ribityllumazine synthase	DEHA2D04180p;similar to uniprot|P50861 Saccharomyces cerevisiae YOL143c RIB4 6 7-dimethyl-8-ribityllumazine synthase;	6,7-dimethyl-8-ribityllumazine synthase	identified by match to TIGR protein family HMM TIGR00114 riboflavin synthase, beta subunit	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	hypothetical 6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase	6,7-dimethyl-8-ribityllumazine synthase 1	
ECOLI00393	N utilization substance protein B	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B homolog	Putative NusB protein	N utilization substance protein B homolog	N utilization substance protein B homolog	N utilization substance protein B	
ECOLI00394	Thiamine-monophosphate kinase	Probable thiamine-monophosphate kinase	Thiamin-monophosphate kinase	Thiamine monophosphate kinase	Thiamine-monophosphate kinase	Hydrogenase expression/formation protein	Slr1787 protein	Thiamine-monophosphate kinase	Probable thiamine-monophosphate kinase	Thiamine-monophosphate kinase	Thiamine monophosphate kinase	Probable thiamine-monophosphate kinase	Thiamine monophosphate kinase	Probable thiamine-monophosphate kinase	Putative thiamine-monophosphate kinase	Thiamine-monophosphate kinase	Putative thiamine monophosphate kinase	Thiamine monophosphate kinase	Putative thiamine monophosphate kinase	Thiamine monophosphate kinase related protein	AIR synthase related protein	Probable thiamine-monophosphate kinase	Thiamine monophosphate kinase	Thiamine-monophosphate kinase	Putative thiamine-monophosphate kinase	Thiamine-monophosphate kinase	Thiamin-monophosphate kinase	ThiL	Thiamine monophosphate kinase	
ECOLI00395	Phosphatidylglycerophosphatase A	Phosphatidylglycerophosphatase A	Phosphatidylglycerophosphatase A	Phosphatidylglycerophosphatase A	Phosphatidylglycerophosphatase A	Putative uncharacterized protein	Phosphatidylglycerophosphatase A	PgpA	Phosphatidylglycerophosphatase A	Putative phosphatidylglycerophosphatase	Phosphatidylglycerophosphatase A	Phosphatidylglycerophosphatase A	Related to phosphatidylglycerophosphatase A	Putative phosphatidylglycerophosphatase	Phosphatidylglycerophosphatase A, putative	Putative phosphatidylglycerophosphatase A	Phosphatidylglycerophosphatase A	Phosphatidylglycerophosphatase A	Phosphatidylglycerophosphatase	Phosphatidylglycerophosphatase A	Putative phosphatidylglycerophosphatase	Putative phosphatidylglycerophosphatase	Phosphatidylglycerophosphatase A	Phosphatidylglycerophosphatase A	Putative phosphatidylglycerophosphatase	PHOSPHATIDYLGLYCEROPHOSPHATASE A	Conserved hypothetical integral membrane protein	Phosphatidylglycerophosphatase A, putative	Phosphatidylglycerophosphatase A	
ECOLI00396	Uncharacterized oxidoreductase yajO	Putative oxidoreductase	Lmo2005 protein	Hypothetical oxidoreductase yajO	go_function: aryl-alcohol dehydrogenase activity [goid 0018456]; go_process: aldehyde metabolism [goid 0006081] aryl-alcohol dehydrogenase, putative	Putative NAD(P)H-dependent xylose reductase	Lin2113 protein	Residues 1 to 305 of 305 are 99 pct identical to residues 25 to 329 of a 348 aa protein from Escherichia coli K12 ref: NP_414953.1 putative NAD(P)H-dependent xylose reductase	Oxidoreductase (Aldo/keto reductase) protein	IPR001395: Aldo/keto reductase putative oxidoreductase / K + channel protein	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	identified by match to protein family HMM PF00248 oxidoreductase, aldo/keto reductase family	Oxidoreductase, aldo/keto reductase family	Putative oxidoreductase , K + channel protein	identified by match to protein family HMM PF00248 oxidoreductase, aldo/keto reductase family	Aldo/keto reductase	Aldo/keto reductase	Code: C; COG: COG0667 putative NAD(P)H-dependent xylose reductase	Code: C; COG: COG0667 putative NAD(P)H-dependent xylose reductase	Aldo/keto reductase	putative oxidoreductase protein	Aldo/keto reductase	Code: C; COG: COG0667 putative NAD(P)H-dependent xylose reductase	putative oxidoreductase similarity:fasta; with=UniProt:Q44328_9RHIZ (EMBL:AF242881); Agrobacterium tumefaciens.; MocA.; length=354; id 40.064; 312 aa overlap; query 1-309; subject 1-311 similarity:fasta; with=UniProt:Q82MR3_STRAW (EMBL:BA000030); Streptomyces avermitilis.; Putative oxidoreductase.; length=322; id 70.679; 324 aa overlap; query 1-324; subject 1-321	Aldo/keto reductase	probable oxidoreductase (aldo/keto reductase) protein similar to Bcep5671 [Burkholderia fungorum] Similar to entrez-protein:ZP_00032809.1 Putative location:bacterial cytoplasm Psort-Score: 0.0847	Putative oxidoreductase	Aldo/keto reductase	Hypothetical oxidoreductase YajO	
ECOLI00397	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase 1	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	identified by match to PFAM protein family HMM PF04002 1-deoxyxylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose-5-phosphate synthase	
ECOLI00398	Geranyltranstransferase	similar to sgd|S0005990 Saccharomyces cerevisiae YPL069c BTS1 geranylgeranyl diphosphate synthase, start by similarity	Dimethylallyltransferase	Bifunctional short chain isoprenyl diphosphate synthase	Geranyltranstransferase	Geranyltranstransferase	Geranylgeranyl pyrophosphate synthase	Geranyltranstransferase	Geranyltranstransferase	similar to uniprot|Q12051 Saccharomyces cerevisiae YPL069c BTS1;	342aa long hypothetical geranylgeranyl pyrophosphate synthetase	similar to SP:P31969, GB:M99379,  and PID:154583; identified by sequence similarity; putative geranylgeranyl pyrophosphate synthase, putative	Geranyltranstransferase	Geranylgeranyl pyrophosphate synthase	IdsA-like multifunctional short chain isoprenyl diphosphate synthase	Bifunctional short chain isoprenyl diphosphate synthase	Polyprenyl synthetase	Geranyltranstransferase	Geranyltranstransferase	Geranyltranstransferase	Geranyltranstransferase	IspA	Geranyltranstransferase	Geranyltranstransferase	Geranyltranstransferase	Geranylgeranyl pyrophosphate synthase	Geranylgeranyl diphosphate synthase	Geranyltranstransferase	Geranyltranstransferase	
ECOLI00399	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	putative exodeoxyribonuclease, small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	identified by match to protein family HMM PF02609; match to protein family HMM TIGR01280 exodeoxyribonuclease VII, small subunit	identified by match to TIGR protein family HMM TIGR01280 exodeoxyribonuclease VII, small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	Exodeoxyribonuclease 7 small subunit	
ECOLI00400	Thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	ATP pyrophosphatase involved in thiamine biosynthesis	Probable thiamine biosynthesis protein thiI	NEQ423	Probable thiamine biosynthesis protein thiI	Thiamine biosynthesis protein:THUMP domain	Putative thiamine biosynthesis protein THII	hypothetical thiamine biosynthesis protein thiI	Hypothetical thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Thiamine biosynthesis protein thiI	Thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Thiamine biosynthesis protein thiI	Probable thiamine biosynthesis protein thiI	Thiamine biosynthesis protein thiI	Probable tRNA sulfurtransferase	Probable tRNA sulfurtransferase	Probable tRNA sulfurtransferase	
ECOLI00401	Protein thiJ	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme	Putative ThiJ family intracellular protease/amidase	4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein	4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein	4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein	Putative ThiJ family intracellular protease	Putative 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme	Putative 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein	Putative uncharacterized protein	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme	4-methyl-5b-hydroxyethyl-thiazole monophosphate biosynthesis protein	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme	MONOPHOSPHATE SYNTHESISPROTEIN	ThiJ/PfpI family protein	4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein	4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme	4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis	DJ-1 family protein	Putative uncharacterized protein	Putative intracellular protease/amidase, ThiJ family	Putative intracellular protease/amidase	4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme	Putative uncharacterized protein	Residues 1 to 198 of 198 are 97 pct identical to residues 1 to 198 of a 198 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286166.1 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis	
ECOLI00402	2-dehydropantoate 2-reductase	weakly similar to sp|Q9HDU6 Schizosaccharomyces pombe Probable 2-dehydropantoate 2-reductase (EC 1.1.1.  169) (Ketopantoate reductase), hypothetical start	Putative 2-dehydropantoate 2-reductase	DEHA2G13332p;similar to uniprot|P38787 Saccharomyces cerevisiae YHR063c PAN5 2-dehydropantoate-2-reductase;	2-dehydropantoate 2-reductase	Putative 2-dehydropantoate 2-reductase	Probable 2-dehydropantoate 2-reductase	Ketopantoate reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	hypothetical 2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	identified by match to protein family HMM PF02558; match to protein family HMM TIGR00745 2-dehydropantoate 2-reductase, putative	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	pyrimidine-thiamine biosynthesis (ketopantoate reductase) (KPA reductase)	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	Putative 2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase	
ECOLI00403	UPF0234 protein yajQ	UPF0234 protein XCC3632	UPF0234 protein HI1034	UPF0234 protein SAV_4896	UPF0234 protein SYNW1816	UPF0234 protein PMM0481	UPF0234 protein EF_1165	UPF0234 protein PM1656	UPF0234 protein PA4395	UPF0234 protein Cj0374	UPF0234 protein VV1636	UPF0234 protein LA_3406	UPF0234 protein yajQ	UPF0234 protein all4662	UPF0234 protein BA_1166/GBAA_1166/BAS1081	UPF0234 protein BC_1159	UPF0234 protein BT9727_1064	UPF0234 protein BPSL0867	conserved hypothetical protein	UPF0234 protein Bd0338	UPF0234 protein yajQ	identified by match to protein family HMM PF04461 conserved hypothetical protein	UPF0234 protein DVU_1981	UPF0234 protein VC_1508	UPF0234 protein BP2916	UPF0234 protein BB1300	UPF0234 protein SO_3815	UPF0234 protein ECA1137	UPF0234 protein PSPTO_4393	
ECOLI00404	Inner membrane transport protein yajR	Transporter, putative	Transporter	Transporter	Drug resistance translocase family protein	Probable major facilitator superfamily (MFS) transporter	Hpothetical major facilitator family transport protein	Permeases of the major facilitator superfamily	Putative transporter protein	Hypothetical transport protein yajR	putative sugar transporter	Putative transport protein	Putative transport protein	Transporter, putative	Probable transporter	Major facilitator family transporter	hypothetical conserved protein	Major facilitator family transporter	Putative transport protein	Putative transporter	MFS family transporter	Putative multidrug-efflux transporter transmembrane protein	Similar to probable transport protein YajR of Escherichia coli	putative transport protein, MFS family hypothetical protein	conserved gene major facilitator family transporter	Similar to major facilitator superfamily (MFS)transporter hypothetical protein	Probable integral membrane transporter	PROBABLE CONSERVED INTEGRAL MEMBRANE TRANSPORT PROTEIN	Mb2483c, -, len: 418 aa. Equivalent to Rv2456c, len: 418 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 418 aa overlap). Probable conserved integral membrane transport protein, involved in a efflux system, weakly similar to many e.g.  Q9RUR0|YD22_DEIRA|DR1322 PUTATIVE SUGAR EFFLUX TRANSPORTER from Deinococcus radiodurans (389 aa), FASTA scores: opt: 224, E(): 8.4e-06, (24.45% identity in 409 aa overlap); Q9UYY0|PAB0913 MULTIDRUG RESISTANCE PROTEIN from Pyrococcus abyssi (410 aa), FASTA scores: opt: 210, E(): 5.6e-05, (21.8% identity in 408 aa overlap); etc. Contains PS00216 Sugar transport proteins signature 1. PUTATIVE CONSERVED INTEGRAL MEMBRANE TRANSPORT PROTEIN	
ECOLI00405	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Heme synthase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase 2	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	PMID: 8253713 PMID: 9537320 best DB hits: BLAST: gb:AAH00060.1; AAH00060 (BC000060) Unknown (protein for MGC:2077); E=9e-25 gb:AAF52915.1; (AE003628) CG5037 gene product [Drosophila; E=2e-24 gb:AAA21148.1; (U09466) heme A:farnesyltransferase [Homo sapiens]; E=4e-24 COG: YPL172c; COG0109 Polyprenyltransferase (cytochrome oxidase assembly; E=9e-23 VNG0666G_2; COG0109 Polyprenyltransferase (cytochrome oxidase; E=8e-11 AF2036; COG0109 Polyprenyltransferase (cytochrome oxidase assembly; E=4e-09 PFAM: PF01943; Polysaccharide biosynthesis pro; E=0.44 PF01040; UbiA prenyltransferase family; E=1.5e-31 protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase 2	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Residues 1 to 311 of 311 are 99 pct identical to residues 1 to 311 of a 311 aa protein from Escherichia coli gb: AAB40184.1 cytochrome o ubiquinol oxidase C subunit	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase	Protoheme IX farnesyltransferase 2	cytochrome oxidase assembly factor, polyprenyltransferase	Protoheme IX farnesyltransferase	IPR000537: UbiA prenyltransferase; IPR001969: Eukaryotic/viral aspartic protease, active site; IPR006369: Protoheme IX farnesyltransferase protohaeme IX farnesyltransferase (haeme O biosynthesis)	similar to Salmonella typhi CT18 cytochrome o ubiquinol oxidase C subunit cytochrome o ubiquinol oxidase C subunit	Protoheme IX farnesyltransferase	
ECOLI00406	Cytochrome o ubiquinol oxidase protein cyoD	Cytochrome O ubiquinol oxidase subunit IV	Cytochrome O ubiquinol oxidase subunit IV	Ubiquinol oxidase subunit IV	Cytochrome o ubiquinol oxidase protein cyoD	Cytochrome o ubiquinol oxidase subunit IV	Cytochrome o ubiquinol oxidase C subunit	QoxD protein	Cytochrome O ubiquinol oxidase protein cyoD	similar to GP:1773113, GB:X66403, SP:Q04844, and PID:560153; identified by sequence similarity; putative ubiquinol oxidase subunit IV	Cytochrome ubiquinol oxidase subunit IV	Cytochrome ubiquinol oxidase subunit IV	Cytochrome O ubiquinol oxidase subunit IV	Cytochrome o ubiquinol oxidase protein cyoD	Cytochrome o ubiquinol oxidase, subunit IV	Cytochrome ubiquinol oxidase subunit IV	cytochrome aa3 quinol oxidase subunit IV	CYTOCHROME O UBIQUINOL OXIDASE OPERON PROTEIN CYOD	Putative uncharacterized protein VPA0630	Cytochrome o ubiquinol oxidase protein cyoD	Putative cytochrome O ubiquinol oxidase chain IV cyoD	cytochrome o ubiquinol oxidase subunit IV	Cytochrome O ubiquinol oxidase protein	Cytochrome o ubiquinol oxidase protein cyoD	QoxD protein	Residues 1 to 109 of 109 are 100 pct identical to residues 1 to 109 of a 109 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286171.1 cytochrome o ubiquinol oxidase subunit IV	Cytochrome O ubiquinol oxidase subunit CyoD	CyoD protein	Probable transmembrane cytochrome o ubiquinol oxidase (Subunit iv) oxidoreductase protein	
ECOLI00407	Cytochrome o ubiquinol oxidase subunit 3	Cytochrome O ubiquinol oxidase subunit III	Cytochrome o ubiquinol oxidase subunit 3	Cytochrome o ubiquinol oxidase subunit III	AA3-600 quinol oxidase subunit III	Probable cytochrome c oxidase subunit 3	Cytochrome o ubiquinol oxidase subunit 3	similar to GB:M38083, GB:M59199, GB:M62783, SP:P17050, PID:1513067, PID:178248, PID:189055, GB:M38083, GB:M59199, GB:M62783, SP:P17050, PID:1513067, PID:178248, and PID:189055; identified by sequence similarity; putative ubiquinol oxidase subunit III	Cytochrome o ubiquinol oxidase subunit III	Cytochrome o ubiquinol oxidase subunit 3	Cytochrome o ubiquinol oxidase, subunit III	cytochrome aa3 quinol oxidase subunit III	Probable cytochrome c oxidase subunit 3	Ubiquinol oxidase, subunit III	CYTOCHROME O UBIQUINOL OXIDASE SUBUNIT III	Cytochrome o ubiquinol oxidase, subunit III	Cytochrome o ubiquinol oxidase subunit III	CDS_ID OB2255 cytochrome aa3 quinol oxidase subunit III	Probable cytochrome o ubiquinol oxidase chain III cyoC	Cytochrome c oxidase polypeptide III	Cytochrome aa3 quinol oxidase subunit III	Cytochrome o ubiquinol oxidase subunit 3	Cytochrome c oxidase subunit III	AA3-600 quinol oxidase subunit III	Residues 1 to 204 of 204 are 100 pct identical to residues 1 to 204 of a 204 aa protein from Escherichia coli K12 ref: NP_414964.1 cytochrome o ubiquinol oxidase subunit III	Cytochrome O ubiquinol oxidase subunit III	Probable quinol oxidase subunit 3	CyoC protein	Probable transmembrane cytochrome o ubiquinol oxidase (Subunit III) oxidoreductase protein	
ECOLI00408	Ubiquinol oxidase subunit 1	Cytochrome O ubiquinol oxidase subunit I	Cytochrome O ubiquinol oxidase subunit I	Cytochrome c oxidase polypeptide I/III	Ubiquinol oxidase subunit 1	Cytochrome o ubiquinol oxidase subunit I	Cytochrome aa3 quinol oxidase, subunit I	AA3-600 quinol oxidase subunit I	Cytochrome aa3 quinol oxidase polypeptide I	Quinol oxidase, subunit 1	Ubiquinol oxidase polypeptide I	Ubiquinol oxidase subunit 1	identified by match to protein family HMM PF00115 quinol oxidase, subunit I	identified by match to PFAM protein family HMM PF03626 ubiquinol oxidase subunit I	Cytochrome O ubiquinol oxidase subunit I	Ubiquinol oxidase subunit 1	Cytochrome o ubiquinol oxidase, subunit I	cytochrome aa3 quinol oxidase subunit I	CYTOCHROME O UBIQUINOL OXIDASE SUBUNIT I	Cytochrome o ubiquinol oxidase, subunit I	Ubiquinol oxidase subunit 1	CDS_ID OB2254 cytochrome aa3 quinol oxidase subunit I	Probable cytochrome o ubiquinol oxidase chain I cyoB	Cytochrome aa3 quinol oxidase subunit I	Ubiquinol oxidase subunit 1	AA3-600 quinol oxidase subunit I	Cytochrome o ubiquinol oxidase subunit I	similar to Escherichia coli K12 cytochrome o ubiquinol oxidase subunit I gi: 1786634 (664 aa). BLAST with identity of 99% in 663 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Cytochrome O ubiquinol oxidase subunit I	
ECOLI00409	Ubiquinol oxidase subunit 2	Cytochrome O ubiquinol oxidase subunit II	Cytochrome c oxidase polypeptide II	Ubiquinol oxidase subunit 2	Cytochrome o ubiquinol oxidase subunit II	Ubiquinol oxidase subunit 2 precursor	similar to GP:15155020, GB:M27504, GB:Z15111, GB:S56813, GB:X68060, GB:Z15115, GB:D17023, SP:Q02880, PID:1354507, PID:2088635, PID:288565, PID:288567, PID:339810, PID:37231, and PID:38325; identified by sequence similarity; putative ubiquinol oxidase, subunit II	Putative ubiquinol oxidase polypeptide II	Putative ubiquinol oxidase polypeptide II	Cytochrome o ubiquinol oxidase subunit II	Cytochrome o ubiquinol oxidase, subunit II	Putative ubiquinol oxidase polypeptide II	CYTOCHROME O UBIQUINOL OXIDASE SUBUNIT II	Cytochrome o ubiquinol oxidase, subunit II	Cytochrome o ubiquinol oxidase subunit II	Probable cytochrome o ubiquinol oxidase chain II cyoA	Cytochrome c oxidase polypeptide II	Ubiquinol oxidase subunit 2	Cytochrome o ubiquinol oxidase subunit II	Cytochrome O ubiquinol oxidase subunit II	Probable quinol oxidase subunit 2	CyoA protein	Probable transmembrane cytochrome o ubiquinol oxidase (Subunit II) oxidoreductase protein	Ubiquinol oxidase polypeptide II	cytochrome o ubiquinol oxidase subunit II	identified by similarity to SP:P34957; match to protein family HMM PF02790; match to protein family HMM TIGR01432 quinol oxidase, subunit II	Cytochrome o ubiquinol oxidase, subunit II	Cytochrome O ubiquinol oxidase, subunit II	Quinol oxidase polypeptide II QoxA	
ECOLI00410	Protein ampG	Beta-lactamase induction signal transducer protein	Signal transducer	Uncharacterized protein HI0350	AmpG protein, putative	AmpG-related protein	Putative uncharacterized protein	Probable permease	Putative AmpG protein	AmpG protein	Alr4533 protein	Related to AmpG protein	Putative membrane protein	AmpG protein	AmpG protein, putative	Putative transporter ampG 1	Putative integral membrane signal transducer protein	Putative integral membrane signal transducer protein	AmpG protein, putative	Beta-lactamase induction signal transducer	AmpG protein, putative	Putative integral membrane signal transducer protein	signal transducer AmpG homolog	AmpG-related permease	Putative AmpG protein	Protein ampG	AmpG	Putative MFS transporter and signal transducer AmpG	AmpG protein	
ECOLI00411	Uncharacterized lipoprotein yajG	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	Hypothetical lipoprotein	Hypothetical lipoprotein yajG precursor	Lipoprotein, putative	Lipoprotein, putative	Putative lipoprotein	Putative lipoprotein	Putative uncharacterized protein yajG	Lipoprotein	Residues 20 to 245 of 245 are 99 pct identical to residues 1 to 226 of a 226 aa protein from Escherichia coli K12 ref: NP_414968.1 putative polymerase-proteinase	Putative lipoprotein	Similar to putative lipoprotein YajG of Escherichia coli	IPR005619: Uncharacterized lipoprotein putative lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	putative lipoprotein	Similar to: HI0162, YAJG_HAEIN conserved hypothetical lipoprotein	Uncharacterized lipoprotein Hypothetical protein	Putative lipoprotein	putative lipoprotein	Code: M; COG: COG3056 putative polymerase/proteinase	Code: M; COG: COG3056 putative polymerase/proteinase	putative lipoprotein	Code: M; COG: COG3056 putative polymerase/proteinase	Putative lipoprotein	Lipoprotein, putative	
ECOLI00412	Protein bolA	similar to gi|NP_075206|sgd|S0007586 Saccharomyces cerevisiae YAL044wa, hypothetical start	Bsr0185 protein	similar to ca|CA5246|IPF19808 Candida albicans unknown function, hypothetical start	Morphogene BolA protein	Putative uncharacterized protein	Protein bolA homolog	BolA protein	Putative uncharacterized protein	Morphogene protein BolA	Cell division protein BolA	Stress induced morphogen	BolA protein	Asr0798 protein	Putative uncharacterized protein	BolA protein, putative	putative cell division protein BolA	BolA-like protein	Protein bolA	similar to SP:P15298; identified by sequence similarity; putative bolA protein	Protein bolA	BolA protein	Morphogene, putative regulator of murein genes	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Uncharacterized protein BUsg_457	BolA protein	BolA-like protein	hypothetical protein	

ECOLI00413	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	identified by match to TIGR protein family HMM TIGR01796 trigger factor	FKBP-type peptidyl-prolyl cis-transisomerase	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	Trigger factor	
ECOLI00414	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit 3	ATP-dependent Clp protease proteolytic subunit 2	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit 1	ATP-dependent Clp protease proteolytic subunit 3	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit 1	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit 2	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit 2	
ECOLI00415	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	similar to sp|P38323 Saccharomyces cerevisiae YBR227c MCX1 singleton, hypothetical start	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	identified by match to PFAM protein family HMM PF03587 ATP-dependent Clp protease, ATP-binding regulatory subunit ClpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	ATP-dependent Clp protease ATP-binding subunit clpX	
ECOLI00416	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	Lon protease	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	ATP-dependent protease La	putative ATP-dependent protease LA	
ECOLI00417	DNA-binding protein HU-beta	DNA-binding protein HU	Histone-like protein	DNA-binding protein HU-beta	DNA-binding protein HU-beta	DNA-binding protein HU-beta	DNA-binding protein HU-beta	Bacterial nucleoid DNA-binding protein	DNA-binding protein HU-beta	Probable DNA-binding protein HU	DNA-binding protein HU-beta	putative bacterial nucleoid DNA-binding protein	DNA-binding protein HU-beta	DNA-binding protein HU-beta	DNA-binding protein Hu-beta	DNA-binding protein Hu-beta	DNA-binding protein, HU family	DNA-binding protein HU	DNA-binding protein HU-beta	DNA-binding protein HU-beta	DNA-binding protein Hu-beta	DNA-binding protein HU	DNA-binding protein HU-beta	DNA-binding protein HU-beta	DNA-binding protein HU	Bacterial nucleoid DNA-binding protein	DNA-binding protein	Residues 1 to 90 of 90 are 98 pct identical to residues 1 to 90 of a 90 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286182.1 DNA-binding protein HU-beta, NS1 (HU-1)	DNA-binding protein HU-beta	
ECOLI00418	Peptidyl-prolyl cis-trans isomerase D	Putative uncharacterized protein	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase D	Rotamase family protein	Putative uncharacterized protein	Peptidyl-prolyl cis-trans isomerase-related protein	Putative uncharacterized protein	Peptidyl-prolyl cis-trans isomerase D	Putative periplasmic protein	Parvulin-like peptidyl-prolyl isomerase	Peptidyl-prolyl cis-trans isomerse D	Peptidyl-prolyl cis-trans isomerase D	Related to peptidyl-prolyl cis-trans isomerase D	Putative peptidyl-prolyl cis-trans isomerase	putative peptidyl-prolyl cis-trans isomerase D	Peptidyl-prolyl cis-trans isomerase D	identified by match to PFAM protein family HMM PF04012 rotamase family protein	Peptidyl-prolyl cis-trans isomerse domain protein	Peptidyl-prolyl cis-trans isomerse D	Peptidyl-prolyl cis-trans isomerase D	Peptidyl-prolyl cis-trans isomerase D	Peptidyl-prolyl cis-trans isomerase D	Peptidyl-prolyl cis-trans isomerase D	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PROTEIN	Peptidyl-prolyl cis-trans isomerase D	Peptidyl-prolyl cis-trans isomerase D, putative	Peptidyl-prolyl cis-trans isomerase D	
ECOLI00419	Uncharacterized protein ybaV	Putative exported protein	Hypothetical protein ybaV	DNA-binding protein, putative	Putative exported protein	Competence protein, putative	Putative uncharacterized protein ybaV	Residues 1 to 123 of 123 are 100 pct identical to residues 1 to 123 of a 123 aa protein from Escherichia coli K12 ref: NP_414976.1 orf, conserved hypothetical protein	IPR000445: Helix-hairpin-helix motif putative DNA uptake protein and related DNA-binding proteins	similar to Salmonella typhi CT18 putative exported protein putative exported protein	DNA uptake protein and related DNA-binding proteins ComEA protein	DNA uptake protein, DNA-binding	Putative DNA uptake protein and related DNA- binding proteins	identified by similarity to SP:P39694; match to protein family HMM TIGR00426 comE domain protein	identified by match to protein family HMM TIGR00426 competence protein ComEA helix-hairpin-helix repeat region	identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426 competence protein comEA	Competence protein ComEA helix-hairpin-helix region	Code: L; COG: COG1555 conserved hypothetical protein	Code: L; COG: COG1555 conserved hypothetical protein	Code: L; COG: COG1555; orf conserved hypothetical protein	Putative uncharacterized protein	Competence protein ComEA helix-hairpin-helix repeat protein precursor	Flagellar motor switch protein FliM	Putative uncharacterized protein ybaV	competence protein ComEA helix-hairpin-helix repeat protein KEGG: she:Shewmr4_2476 competence protein ComEA helix-hairpin-helix repeat protein TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein PFAM: helix-hairpin-helix motif SMART: Helix-hairpin-helix DNA-binding, class 1	competence protein ComEA helix-hairpin-helix repeat protein KEGG: son:SO1813 DNA-binding protein, putative TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein PFAM: helix-hairpin-helix motif SMART: Helix-hairpin-helix DNA-binding, class 1	Hypothetical protein	putative competence protein	conserved hypothetical protein; Competence protein ComEA helix-hairpin-helix region Evidence 4 : Homologs of previously reported genes of unknown function	
ECOLI00420	Putative acyl-CoA thioester hydrolase ybaW	Putative uncharacterized protein STY0496	Putative uncharacterized protein	Hypothetical protein ybaW	Putative thioesterase	Putative uncharacterized protein ybaW	Thioesterase family protein	Thioesterase	Residues 1 to 132 of 132 are 98 pct identical to residues 1 to 132 of a 132 aa protein from Escherichia coli K12 ref: NP_414977.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YbaW of Escherichia coli	Putative uncharacterized protein	putative esterase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein ybaW	Hypothetical protein	Putative esterase	Best Blastp Hit: gb|AAF42288.1| (AE002544) conserved hypothetical protein [Neisseria meningitidis MC58] >gi|7379236|emb|CAB83785.1| (AL162753) conserved hypothetical protein [Neisseria meningitidis] COG0824 Predicted esterase conserved hypothetical protein	Code: R; COG: COG0824 conserved hypothetical protein	Code: R; COG: COG0824 conserved hypothetical protein	Code: R; COG: COG0824; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ybaW	conserved hypothetical protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: R; COG: COG0824	Hypothetical protein	
ECOLI00421	Queuosine biosynthesis protein queC	Archaeosine biosynthesis protein queC	Archaeosine biosynthesis protein queC	Queuosine biosynthesis protein queC	Archaeosine biosynthesis protein queC	Queuosine biosynthesis protein queC	Archaeosine biosynthesis protein queC	Archaeosine biosynthesis protein queC	Archaeosine biosynthesis protein queC	Queuosine biosynthesis protein queC	Queuosine biosynthesis protein queC	Queuosine biosynthesis protein queC	Queuosine biosynthesis protein queC	Queuosine biosynthesis protein queC	Queuosine biosynthesis protein queC	7-cyano-7-deazaguanine synthase	7-cyano-7-deazaguanine synthase	7-cyano-7-deazaguanine synthase	7-cyano-7-deazaguanine synthase	7-cyano-7-deazaguanine synthase	putative exsB protein	7-cyano-7-deazaguanine synthase	Queuosine biosynthesis protein queC	identified by match to protein family HMM TIGR00364 exsB protein	7-cyano-7-deazaguanine synthase	7-cyano-7-deazaguanine synthase	7-cyano-7-deazaguanine synthase	7-cyano-7-deazaguanine synthase	Queuosine biosynthesis protein queC	
ECOLI00422	Uncharacterized protein ybaE	Putative solute-binding protein	Oligopeptide-binding protein oppA	hypothetical protein	Hypothetical protein ybaE	Putative uncharacterized protein ybaE	Putative uncharacterized protein	Lin2150 protein	Residues 1 to 474 of 474 are 99 pct identical to residues 93 to 566 of a 566 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286187.1 orf, conserved hypothetical protein	ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components	ABC transporter substrate-binding protein	putative ABC transporter periplasmic binding protein	similar to Salmonella typhi CT18 putative solute-binding protein putative solute-binding protein	Putative uncharacterized protein	identified by match to protein family HMM PF00496 bacterial extracellular solute-binding protein, family 5	Putative ABC transporter periplasmic binding protein	Code: R; COG: COG4533 conserved hypothetical protein	Code: R; COG: COG4533 conserved hypothetical protein	Code: R; COG: COG4533; orf conserved hypothetical protein	Putative extracellular solute-binding protein	Hypothetical protein	Putative uncharacterized protein ybaE	Hypothetical protein	Hypothetical protein	Complete genome	conserved hypothetical protein Code: R; COG: COG4533	Hypothetical protein	conserved hypothetical protein	Extracellular solute-binding protein, family 5	
ECOLI00423	HMP-PP phosphatase	Hydrolase, haloacid dehalogenase-like hydrolase	HMP-PP phosphatase	Hydrolase, HAD superfamily	Hydrolase	Cof protein	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01484 hydrolase, haloacid dehalogenase-like family	HMP-PP phosphatase	hypothetical protein	Lin2453 protein	Residues 1 to 276 of 276 are 97 pct identical to residues 1 to 276 of a 276 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286188.1 orf, conserved hypothetical protein	HMP-PP phosphatase	Similar to unknown protein	Putative uncharacterized protein	IPR000150: Cof protein putative hydrolase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	HMP-PP phosphatase	Hydrolase	CHR28_tmp.0940, predicted protein, len = 290 aa, possibly haloacid dehalogenase-like hydrolase; predicted pI = 5.7878; contains a haloacid dehalogenase-like hydrolase domain haloacid dehalogenase-like hydrolase-like protein	HMP-PP phosphatase	hydrolase, HAD superfamily	Code: R; COG: COG0561 conserved hypothetical protein	Putative hydrolase, haloacid dehalogenase family	Code: R; COG: COG0561 conserved hypothetical protein	HAD-superfamily hydrolase subfamily IIB TIGRFAM: HAD-superfamily hydrolase subfamily IIB: (2.6e-15) PFAM: Haloacid dehalogenase-like hydrolase: (5.7e-05) sucrose-6F-phosphate phosphohydrolase: (0.00014) Haloacid dehalogenase-like hydrolase, type 3: (3.2e-18) KEGG: dra:DR2147 hypothetical protein, ev=2e-78, 66% identity	Cof protein	HMP-PP phosphatase	Putative haloacid dehalogenase-like hydrolase	Hydrolase	
ECOLI00424	Uncharacterized HTH-type transcriptional regulator ybaO	Transcriptional regulator, AsnC family	Transcriptional regulator	Hypothetical transcriptional regulator	Putative AsnC-family transcriptional regulator	putative transcriptional regulator, AsnC family	Putative HTH-type transcriptional regulator ybaO	Transcriptional regulator, AsnC family	AsnC-family transcriptional regulator	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Transcriptional regulator, AsnC family	Transcriptional regulator, AsnC family	Transcriptional regulator, AsnC family	Uncharacterized HTH-type transcriptional regulator ybaO	Transcriptional regulator	Transcriptional regulator	Residues 8 to 188 of 188 are 98 pct identical to residues 1 to 181 of a 181 aa protein from Escherichia coli O157:H7 ref: NP_308528.1 putative LRP-like transcriptional regulator	Probable AsnC-family regulatory protein	Similar to transcriptional regulator AsnC-family YbaO of Escherichia coli	IPR000485: Bacterial regulatory proteins, AsnC/Lrp putative transcriptional regulator (AsnC familiy)	similar to Salmonella typhi CT18 hypothetical transcriptional regulator hypothetical transcriptional regulator	Probable AsnC-family regulatory protein	COG1522 glutamate uptake regulatory protein	transcriptional regulator, AsnC family	Putative transcriptional regulator	identified by match to protein family HMM PF01037 transcription regulator, AsnC family	identified by match to protein family HMM PF01037; match to protein family HMM TIGR01199 transcriptional regulator, AsnC family	regulatory proteins, AsnC/Lrp	Transcriptional regulatory proteins, AsnC/Lrp family	
ECOLI00425	Multidrug resistance-like ATP-binding protein mdlA	ABC-type multidrug transport system, ATPase and permease component	Putative ABC transporter ATP-binding membrane protein	ABC transporter, permease/ATP-binding protein	Related to ABC transporter, multidrug resistance- like ATP-binding protein	Multidrug resistance ABC transporter ATP-binding and permease protein	ABC transporter, ATP-binding and permease protein	Multidrug resistance-like ATP-binding protein mdlA	ABC transporter ATP-binding protein	ABC transporter, ATP-binding/permease protein	identified by match to protein family HMM PF00005; match to protein family HMM PF00664 ABC transporter, ATP-binding/permease protein	Multidrug resistance-like ATP-binding protein mdla	ATP-binding component of a transport system	ATP-binding component of a transport system	ABC transporter, ATP-binding/permease protein	ABC-type multidrug/protein/lipid transport system, ATPase component	ATP-binding component of a transport system	Residues 1 to 590 of 590 are 98 pct identical to residues 1 to 590 of a 590 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286190.1 ATP-binding component of a transport system	Probable ABC transporter	Mdl protein	ABC transporter ABC binding and permease protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC superfamily (atp) transporter	similar to Salmonella typhi CT18 putative ABC transporter ATP-binding membrane protein putative ABC transporter ATP-binding membrane protein	Putative uncharacterized protein gbs0507	identified by match to PFAM protein family HMM PF00005 ABC transporter, ATP-binding/permease protein	ABC type drug efflux transporter, fused ATP binding and permease domains	Putative ABC transporter ATP-binding/membrane spanning protein - unknown substrate	multidrug resistance ABC transporter ATP-binding and permease protein	Multidrug resistance-like ATP-binding protein mdlA	
ECOLI00426	Multidrug resistance-like ATP-binding protein mdlB	Putative ABC transporter ATP-binding membrane protein	Lmo1651 protein	Multidrug resistance-like ATP-binding protein mdlB	identified by match to protein family HMM PF00005; match to protein family HMM PF00664 ABC transporter, ATP-binding/permease protein	ATP-binding component of ABC transporter	Multidrug resistance-like ATP-binding protein mdlB	ABC transporter (ATP-binding protein)	Putative ATP-binding component of a transport system	Multidrug resistance-like ATP-binding protein mdlB	ABC transporter	Multidrug resistance-like ATP-binding protein mdlB	Lin1691 protein	Residues 1 to 631 of 631 are 98 pct identical to residues 1 to 631 of a 631 aa protein from Escherichia coli gb: AAB40205.1 multidrug resistance-like ATP-binding protein Mdl	Probable ATP transporter	Multidrug resistance-like ATP-binding protein	multidrug ABC transporter ATP-binding protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC superfamily (atp&membrane) transporter	similar to Salmonella typhi CT18 putative ABC transporter ATP-binding membrane protein putative ABC transporter ATP-binding membrane protein	ABC type drug efflux transporter, fused ATP binding and permease domains	identified by match to protein family HMM PF00005; match to protein family HMM PF00664 ABC transporter, ATP-binding/permease protein	ABC transporter, ATP-binding protein	Putative ABC superfamily (Atp&membrane) transporter	Code: V; COG: COG1132 putative ATP-binding component of a transport system	Code: V; COG: COG1132 putative ATP-binding component of a transport system	ABC transporter ATP-binding component	Code: V; COG: COG1132 putative ATP-binding component of a transport system	Multidrug resistance-like ATP-binding protein MdlB	ATP transporter (ATP-binding protein) precursor	
ECOLI00427	Nitrogen regulatory protein P-II 2	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II 1	P-II family protein	Nitrogen regulatory protein P-II 2	Nitrogen regulatory protein P-II 2	Nitrogen regulatory protein PII	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II 2	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II 2	GlnK, nitrogen regulatory protein P-II	GlnK, nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Residues 1 to 158 of 158 are 98 pct identical to residues 1 to 158 of a 158 aa protein from Escherichia coli gb: AAB40206.1 glutamine synthetase activity regulation protein	Nitrogen regulatory protein P-II	Nitrogen regulatory protein	conserved gene nitrogen regulatory P-II transcription regulator	Nitrogen regulatory protein	Nitrogen regulatory protein P-II	IPR002187: Nitrogen regulatory protein P-II; IPR002332: P-II protein urydylation site regulatory protein, P-II 2, for nitrogen assimilation by glutamine synthetase, regulates GlnL (NRII) and GlnE (ATase)	similar to Salmonella typhi CT18 nitrogen regulatory protein P-II nitrogen regulatory protein P-II	Regulatory protein P-II 2, for nitrogen assimilation by glutamine synthetase, regulates GlnL (NRII) and GlnE	
ECOLI00428	Ammonia channel	Ammonium transporter	similar to sp|P41948 Saccharomyces cerevisiae YNL142w MEP2 high affinity low capacity ammonia permease, start by similarity	Ammonium transporter	Ammonium transporter	Ammonium transporter	Ammonium transporter	Ammonium transporter	Ammonium transporter	Ammonium transporter AmtB	Ammonium transporter	Probable ammonium transporter	Ammonium transporter	Ammonia permeases	Ammonium transporter family protein	Probable ammonium transporter	pseudo	Probable ammonium transporter	Probable ammonium transporter	best DB hits: BLAST: gb:AAK00343.1; AF329498_3 (AF329498) ammonium transporter AmtB; E=4e-82 gb:AAC38548.1; (AF005275) AmtB [Azospirillum brasilense]; E=3e-81 embl:CAA12410.1; (AJ225126) ammonium transporter, AmtB; E=4e-77 COG: PA5287; COG0004 Ammonia permeases; E=2e-76 PFAM: PF00909; Ammonium Transporter Family; E=1.5e-154 ammonium transporter	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE AMMONIUM TRANSPORTER PROTEIN	Ammonium transporter	Probable ammonium transporter	Putative ammonium transporter	Ammonium transporter	Putative ammonium transporter, NrgA protein	Ammonia channel	similar to AJ010319-2|CAB39372.1| percent identity: 84 in 438 aa low affinity ammonium uptake protein	Putative ammonium transporter AmtB	
ECOLI00429	Acyl-CoA thioesterase 2	Peroxisomal acyl-CoA thioesterase likely to be involved in fatty acid oxidation rather than fatty acid synthesis; conserved protein also found in human peroxisomes; TES1 mRNA levels increase during growth on fatty acids. [Source:SGD;Acc:S000003780]	similar to tr|Q9C3Z1 Cochliobolus heterostrophus peroxisomal Acyl-CoA thioesterase, start by similarity	Acyl-CoA thioesterase II	similar to sp|P41903 Saccharomyces cerevisiae YJR019c TES1 thioesterase, peroxisomal singleton, start by similarity	Acyl-CoA thioesterase II	Acyl-CoA thiolesterase II	Acyl-CoA thioesterase 2	highly similar to uniprot|P41903 Saccharomyces cerevisiae YJR019c TES1 thioesterase;	Acyl-CoA thioesterase II	Acyl-CoA thioesterase II	TesB	Acyl-CoA thioesterase II	Acyl-CoA thioesterase	Acyl-CoA thioesterase II	Acyl-CoA thioesterase II	putative acyl-CoA thioesterase II	Acyl-CoA thioesterase II	similar to SP:P23911; identified by sequence similarity; putative acyl-CoA thioesterase II	Acyl-CoA thioesterase II	Acyl-CoA thioesterase II	Acyl-CoA thioesterase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE ACYL-COA THIOESTERASE II PROTEIN	Acyl-CoA thioesterase II	Putative acyl-CoA thioesterase	Acyl-CoA thioesterase II	ACYL-COA THIOESTERASE II	Acyl-CoA thioesterase II	Putative acyl-CoA thioesterase II	
ECOLI00430	Uncharacterized lipoprotein ybaY	Hypothetical protein ybaY	Conserved hypothetical lipoprotein	Glycoprotein/polysaccharide metabolism	Residues 1 to 190 of 190 are 100 pct identical to residues 1 to 190 of a 190 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286195.1 glycoprotein-polysaccharide metabolism	Putative lipoprotein	Similar to probable lipoprotein YbaY of Escherichia coli	glycoprotein/polysaccharide metabolism	similar to Salmonella typhi CT18 conserved hypothetical lipoprotein conserved hypothetical lipoprotein	Putative lipoprotein	Glycoprotein/polysaccharide metabolism	Code: S; COG: COG3126 glycoprotein-polysaccharide metabolism	Code: S; COG: COG3126 glycoprotein/polysaccharide metabolism	Putative uncharacterized protein	Putative lipoprotein precursor	Putative uncharacterized protein ybaY	conserved hypothetical protein	conserved hypothetical protein	Lipoprotein precursor	Putative lipoprotein precursor	glycoprotein/polysaccharide metabolism Code: S; COG: COG3126	Lipoprotein precursor	conserved hypothetical lipoprotein	Glycoprotein/polysaccharide metabolism precursor	Putative uncharacterized protein precursor	Glycoprotein/polysaccharide metabolism	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein precursor	
ECOLI00431	Uncharacterized protein ybaZ	Alkyltransferase-like protein 1 [Source:GeneDB_Spombe;Acc:SPAC1250.04c]	DEHA2G06204p;similar to uniprot|Q5ACR6 Candida albicans Potential DNA repair methyltransferase [CaO19.7576],;	Putative methylated-DNA methyltransferase	Putative 6-O-methylguanine DNA methyltransferase family protein	Methyltransferase	Putative uncharacterized protein	Predicted methylated DNA-protein cysteine methyltransferase	Putative uncharacterized protein	Methylated-DNA--protein-cysteine methyltransferase-related protein	Putative methylated-DNA methyltransferase	Lmo0571 protein	Putative methylated-DNA methyltransferase	putative methylated DNA-proteincysteine methyltransferase	Putative methylated-DNA methyltransferase	Hypothetical protein ybaZ	Methylated-DNA--protein-cysteine methyltransferase-related protein	Methylated-DNA--protein-cysteine methyltransferase, putative	Putative 6-O-methylguanine DNA methyltransferase	probable methyltransferase	Methylated-DNA-protein-cysteine methyltransferase -related protein	Putative uncharacterized protein ybaZ	CDS_ID OB3148 hypothetical protein	Predicted methylated DNA-protein cysteine methyltransferase	Lin0580 protein	Methylated-DNA--protein-cysteine methyltransferase	Residues 8 to 136 of 136 are 100 pct identical to residues 1 to 129 of a 129 aa protein from Escherichia coli K12 ref: NP_414988.1 orf, conserved hypothetical protein	probable methyltransferase	Probable methylated-DNA-[protein]-cysteine S- methyltransferase	
ECOLI00432	Uncharacterized protein ybaA	Putative uncharacterized protein	Putative uncharacterized protein ybaA	Hypothetical protein ybaA	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Uncharacterized protein ybaA	hypothetical protein	Residues 1 to 117 of 117 are 100 pct identical to residues 1 to 117 of a 117 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286197.1 orf, conserved hypothetical protein	Similar to conserved hypothetical proteins hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Code: S; COG: COG5507 conserved hypothetical protein	COG5507, Uncharacterized conserved protein conserved hypothetical protein	Code: S; COG: COG5507 conserved hypothetical protein	conserved hypothetical protein	Protein of unknown function DUF1428	Code: S; COG: COG5507; orf conserved hypothetical protein	conserved hypothetical protein similarity:fasta; with=UniProt:Q92NA2_RHIME (EMBL:SME591790); Rhizobium meliloti (Sinorhizobium meliloti).; Hypothetical protein SMc01560.; length=117; id 73.504; 117 aa overlap; query 1-117; subject 1-117	conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	response regulator receiver domain protein (CheY-like)	Hypothetical protein	
ECOLI00433	Uncharacterized protein ylaB	Putative uncharacterized protein	Hypothetical 58.9 kDa protein in tesb-hha intergenic region. Contains probable N-terminal signal sequence	conserved hypothetical protein	Hypothetical protein ylaB	similar to SP:P77473; identified by sequence similarity; putative EAL domain protein	Probable transcriptional regulator	RTN PROTEIN	Putative uncharacterized protein ylaB	Residues 1 to 518 of 518 are 99 pct identical to residues 1 to 518 of a 518 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286198.1 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR001633: EAL domain putative diguanylate cyclase/phosphodiesterase domain 2	similar to Salmonella typhi CT18 hypothetical 58.9 kDa protein in tesb-hha intergenic region. Contains probable N-terminal signal sequence hypothetical 58.9 kDa protein in tesb-hha intergenic region. Contains probable N-terminal signal sequence	similar to BRA0344, EAL domain protein EAL domain protein	Putative uncharacterized protein	Putative diguanylate cyclase/phosphodiesterase domain 2	conserved hypothetical protein	identified by match to protein family HMM PF00563 EAL domain protein	EAL	Code: T; COG: COG4943 conserved hypothetical protein	EAL domain	Code: T; COG: COG4943 conserved hypothetical protein	EAL	Code: T; COG: COG4943; orf conserved hypothetical protein	Putative diguanylate phosphodiesterase	EAL domain protein	Putative uncharacterized protein ylaB	putative signal transduction protein; EAL domain protein Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	conserved hypothetical protein Code: T; COG: COG4943	
ECOLI00434	Inner membrane protein ylaC	Hypothetical protein ylaC	Putative membrane protein	Inner membrane protein ylaC	Residues 1 to 169 of 169 are 99 pct identical to residues 1 to 169 of a 169 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286199.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to probable membrane protein YlaC of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YlaC	Putative membrane protein	Putative uncharacterized protein ylaC	Membrane protein	Putative membrane protein	conserved hypothetical protein	Membrane protein	conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein ylaC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00435	Maltose O-acetyltransferase	weakly similar to sp|Q09707 Schizosaccharomyces pombe putative acetyltransferase C18B11.09c (EC 2.3.1.-), hypothetical start	similar to sp|P40892 Saccharomyces cerevisiae YJL218w singleton, start by similarity	Nodulation protein	DEHA2D01166p;similar to uniprot|Q09707 Schizosaccharomyces pombe SPAC18B11 Putative acetyltransferase C18B11.09c;	Maltose transacetylase	Maltose O-acetyltransferase, putative	Acetyltransferase	Nodulation protein L	Maltose O-acetyltransferase	Maltose O-acetyltransferase	Lmo0664 protein	Acetyltransferases	Putative maltose O-acetyltransferase	Maltose O-acetyltransferase	Maltose O-acetyltransferase	hypothetical maltose O-acetyltransferase	Maltose O-acetyltransferase	maltose O-acetyltransferase	identified by match to protein family HMM PF00132 maltose O-acetyltransferase	go_function: acetyltransferase activity [goid 0016407] hypothetical protein	PMID: 1856235 best DB hits: BLAST: ddbj:BAB06720.1; (AP001517) maltose transacetylase (maltose; E=3e-44 swissprot:P37515; MAA_BACSU PROBABLE MALTOSE O-ACETYLTRANSFERASE; E=1e-43 swissprot:P77791; MAA_ECOLI MALTOSE O-ACETYLTRANSFERASE (MALTOSE; E=3e-40 COG: BH3001; COG0110 Acetyltransferases (the isoleucine patch; E=3e-45 ylaD; COG0110 Acetyltransferases (the isoleucine patch superfamily); E=3e-41 YJL218w; COG0110 Acetyltransferases (the isoleucine patch; E=3e-34 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.62 maltose O-acetyltransferase	NodL Nod factor acetyltransferase	Putative maltose O-acetyltransferase	maltose transacetylase	maltose transacetylase (maltose O-acetyltransferase)	Putative transferase	CDS_ID OB1064; maltose O-acetyltransferase maltose transacetylase	similar to AX065309-1|CAC25894.1| percent identity: 73 in 206 aa putative acetyltransferase	
ECOLI00436	Hemolysin expression-modulating protein	Hemolysin expression-modulating protein	Haemolysin expression modulating protein	Hemolysin expression-modulating protein	Residues 1 to 76 of 76 are 98 pct identical to residues 41 to 116 of a 116 aa protein from Escherichia coli pir: S15270 hha protein	Modulating protein ymoA	Hha protein	Haemolysin expression modulating protein	hemolysin expression modulating protein (involved in environmental regulation of virulence factors)	similar to Salmonella typhi CT18 haemolysin expression modulating protein haemolysin expression modulating protein	Hemolysin expression modulating protein	Hemolysin expression modulating protein	haemolysin expression modulating protein	haemolysin expression modulating protein	haemolysin expression modulating protein	haemolysin expression modulating protein	Hemolysin expression modulating protein	Modulating protein YmoA	Hemolysin expression modulating protein	Modulating protein YmoA	Modulating protein YmoA	Modulating protein YmoA	Haemolysin expression modulating family protein	Haemolysin expression modulating protein	Putative uncharacterized protein	Haemolysin expression modulating family protein	Haemolysin expression modulating protein	Haemolysin expression modulating protein	Haemolysin expression modulating protein	
ECOLI00437	Uncharacterized protein ybaJ	Hypothetical protein ybaJ	Putative uncharacterized protein	Uncharacterized protein ybaJ	Residues 1 to 124 of 124 are 99 pct identical to residues 1 to 124 of a 124 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286202.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative cytoplasmic protein	Hypothetical protein	Putative uncharacterized protein ybaJ	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein ybaJ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00438	Acriflavine resistance protein B	Acriflavin resistance protein B	Putative RND family acriflavine resistance protein	Acriflavine resistance protein B	Acriflavine resistance protein B	Acriflavine resistance protein B	AcrB/AcrD/AcrF family protein	Acriflavin resistance protein B	Acriflavine resistance protein B	Hydrophobe/amphiphile efflux family protein	Acridine efflux pump	Acridine efflux pump	Residues 1 to 1049 of 1049 are 99 pct identical to residues 1 to 1049 of a 1049 aa protein from Escherichia coli K12 ref: NP_414995.1 acridine efflux pump	Multidrug efflux protein	Acriflavin resistance protein B	IPR001036: Acriflavin resistance protein RND family, acridine efflux pump	similar to Salmonella typhi CT18 acriflavin resistance protein B acriflavin resistance protein B	RND family, acridine/multidrug efflux pump	putative RND family multidrug efflux transporter	COG0841 RND multidrug efflux transporter	Probable acriflavine resistance protein B, RND family efflux system component	RND family, acridine efflux pump	Acriflavine resistance protein B	Acriflavin resistance protein B (mulitdrug efflux system)	Code: V; COG: COG0841 acridine efflux pump	The structure shows the AcrB forms a homotrimer. Cation/multidrug efflux pump, RND family	Code: V; COG: COG0841 acridine efflux pump	acriflavine resistance protein B (multidrug efflux system transmembrane protein)	Hydrophobe/amphiphile efflux-1 HAE1	
ECOLI00439	Acriflavine resistance protein A	Acriflavin resistance protein A	Acriflavine resistance protein A	Acriflavine resistance protein a	Putative transmembrane protein affecting septum formation and cell membrane permeability	Acriflavine resistance protein A	Putative RND multidrug efflux membrane fusion protein MexA	Residues 13 to 409 of 409 are 99 pct identical to residues 1 to 397 of a 397 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286204.1 acridine efflux pump	Multidrug efflux protein	Acriflavin resistance protein A	Probable multidrug efflux protein	acridine efflux pump	similar to Salmonella typhi CT18 acriflavin resistance protein A precursor acriflavin resistance protein A precursor	Acridine efflux pump, membrane fusion (MFP/HlyD) family protein	Probable acriflavine resistance protein A, RND family efflux system component	Acridine efflux pump	identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 efflux transporter, RND family, MFP subunit	Secretion protein HlyD	Code: M; COG: COG0845 acridine efflux pump	Cation/multidrug efflux pump, membrane-fusion protein	Code: M; COG: COG0845 acridine efflux pump	acriflavine resistance protein A	secretion protein HlyD	acriflavin efflux protein AcrA	Secretion protein HlyD	Code: M; COG: COG0845 acridine efflux pump	Acriflavin resistance protein A	Multidrug efflux protein precursor	secretion protein HlyD	
ECOLI00440	HTH-type transcriptional regulator acrR	Transcriptional regulator, TetR family	Potential acrAB operon repressor	TetR family regulatory protein	HTH-type transcriptional regulator acrR	similar to GP:15073119; identified by sequence similarity; putative transcriptional regulator, TetR family	Potential acrAB operon repressor	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	AcrAB operon repressor	Residues 1 to 215 of 215 are 100 pct identical to residues 1 to 215 of a 215 aa protein from Escherichia coli K12 ref: NP_414997.1 acrAB operon repressor	Putative tetR-family transcriptional regulatory protein	Putative acrab operon repressor transcription regulator protein	AcrAB operon repressor	hypothetical protein	similar to Salmonella typhi CT18 potential acrAB operon repressor potential acrAB operon repressor	similar to BR0290, transcriptional regulator, TetR family transcriptional regulator, TetR family	Putative transcriptional repressor for multidrug efflux pump	Probable HTH-type transcriptional regulator ttgR	AcrAB operon repressor	identified by similarity to GB:AAK15050.1; match to protein family HMM PF00440 transcriptional regulator TtgR	identified by similarity to GB:AAK15050.1; match to protein family HMM PF00440 transcriptional regulator TtgR	regulatory protein, TetR	regulatory protein, TetR	Code: K; COG: COG1309 acrAB operon repressor	Bacterial regulatory protein TetR, HTH motif	Code: K; COG: COG1309 acrAB operon repressor	AcrAB operon repressor AcrR	
ECOLI00441	Potassium efflux system kefA	Putative uncharacterized protein	Putative uncharacterized protein	Integral membrane protein AefA	Potassium efflux system kefA	PMID: 10202137 best DB hits: BLAST: swissprot:P77338; KEFA_ECOLI POTASSIUM EFFLUX SYSTEM KEFA (AEFA; E=3e-55 gb:AAK02442.1; (AE006072) unknown [Pasteurella multocida]; E=1e-52 swissprot:Q57362; YJEP_HAEIN PROTEIN HI0195.1 PRECURSOR -----; E=9e-49 COG: aefA; COG3264 Small-conductance mechanosensitive channel; E=3e-56 slr0510_1; COG0668 Small-conductance mechanosensitive channel; E=1e-18 PFAM: PF00924; Uncharacterized protein family UPF0; E=1.4e-66 potassium efflux system KefA	Potassium efflux system protein KefA, putative	Putative uncharacterized protein aefA	Residues 1 to 1120 of 1120 are 99 pct identical to residues 1 to 1120 of a 1120 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286206.1 aefA gene product	Putative potassium efflux system	IPR006686: Mechanosensitive (MS) ion channel subdomain putative small-conductance mechanosensitive channel	similar to Salmonella typhi CT18 integral membrane protein AefA integral membrane protein AefA	MscS family mechanosensitive channel	Similar to: HI0195.1, YJEP_HAEIN putative small-conductance mechanosensitive channel	Small-conductance mechanosensitive channel Hypothetical protein	Potassium efflux system protein KefA, putative	Putative small-conductance mechanosensitive channel	identified by match to protein family HMM PF00924 potassium efflux system protein KefA, putative	identified by match to protein family HMM PF00924 potassium efflux system protein KefA, putative	MscS Mechanosensitive ion channel	Code: M; COG: COG3264 putative alpha helix protein	MscS Mechanosensitive ion channel	Code: M; COG: COG3264 putative alpha helix protein	MscS Mechanosensitive ion channel	MscS Mechanosensitive ion channel	Code: M; COG: COG3264 putative alpha helix protein	Potassium efflux system KefA	Hypothetical protein	MscS Mechanosensitive ion channel precursor	
ECOLI00442	Uncharacterized protein ybaM	Putative uncharacterized protein STY0524	conserved hypothetical protein	Hypothetical protein ybaM	Putative uncharacterized protein VC1858	Putative uncharacterized protein	Putative uncharacterized protein VP1004	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 53 of 53 are 98 pct identical to residues 1 to 53 of a 53 aa protein from Escherichia coli K12 ref: NP_414999.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YbaM of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein ybaM	hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ybaM	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein KEGG: vch:VC1858 hypothetical protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	
ECOLI00443	Primosomal replication protein N''	pseudo	hypothetical primosomal replication protein N``	Primosomal replication protein N	Primosomal replication protein N``	Primosomal replication protein N''	Primosomal replication protein N''	Primosomal replication protein N''	Primosomal replication protein N''	Residues 1 to 175 of 175 are 98 pct identical to residues 1 to 175 of a 175 aa protein from Escherichia coli K12 ref: NP_415000.1 primosomal replication protein N''	Primosomal replication protein n''	Primosomal replication factor N''	primosomal replication protein N	similar to Salmonella typhimurium primosomal replication protein N primosomal replication protein N	Putative primosomal replication protein N''	primosomal replication protein N'	Primosomal replication protein N	Code: L; COG: COG3923 primosomal replication protein N''	Code: L; COG: COG3923 primosomal replication protein N''	primosomal replication protein N	Code: L; COG: COG3923 primosomal replication protein N''	Primosomal replication protein N	Primosomal replication protein n''	Primosomal replication protein N''	Primosomal replication protein n''	Primosomal replication protein n''	primosomal replication protein N' Code: L; COG: COG3923	Primosomal replication protein n''	primosomal replication protein N''	
ECOLI00444	Inner membrane protein ybaN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE0228	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV2722	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Conserved hypothetical protein	Putative uncharacterized protein ybaN	Hypothetical protein ybaN	Putative uncharacterized protein	similar to GP:15157642, GB:X00264, SP:P01229, SP:P01233, and PID:2292893; identified by sequence similarity; putative conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein VP2181	Inner membrane protein ybaN	CDS_ID OB3349 hypothetical protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Residues 1 to 125 of 125 are 100 pct identical to residues 1 to 125 of a 125 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286209.1 putative gene 58	
ECOLI00445	Adenine phosphoribosyltransferase	adenine phosphoribosyltransferase 1;	similar to sp|P49435 Saccharomyces cerevisiae YML022w APT1 adenine phosphoribosyltransferase, start by similarity	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase [Source:GeneDB_Spombe;Acc:SPAC23A1.03]	similar to sp|P49435 Saccharomyces cerevisiae YML022w APT1 adenine phosphoribosyltransferase, start by similarity	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	similar to uniprot|P49435 Saccharomyces cerevisiae YML022w APT1 adenine phosphoribosyltransferase or uniprot|P36973 Saccharomyces cerevisiae YDR441c APT2;	DEHA2A01650p;highly similar to uniprot|P49435 Saccharomyces cerevisiae YML022w APT1 adenine phosphoribosyltransferase;	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase 2	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase	
ECOLI00446	DNA polymerase III subunit tau	DNA polymerase, gamma and tau subunits	DNA polymerase III, subunits gamma and tau	DNA polymerase III subunits gamma and tau	DNA polymerase III gamma and tau subunits	Hypothetical DNA polymerase III, subunits gamma and tau	DNA polymerase III subunit tau	DNA polymerase III, gamma and tau subunits, putative	DNA polymerase III, subunits gamma and tau	DNA polymerase III subunit tau	DNA polymerase III, gamma and tau subunits	DNA polymerase III, subunits gamma and tau	DNA polymerase III, tau and gamma subunits; DNA elongation factor III	DNA polymerase III, gamma/tau subunits	Residues 1 to 641 of 641 are 99 pct identical to residues 1 to 643 of a 643 aa protein from Escherichia coli K12 ref: NP_415003.1 DNA polymerase III, tau and gamma subunits; DNA elongation factor III	DNA polymerase III subunit Tau	DNA polymerase III subunit Tau	IPR000694: Proline-rich region; IPR000862: Replication factor C conserved domain; IPR001270: Chaperonin clpA/B DNA polymerase III, tau and gamma subunits; DNA elongation factor III	similar to Salmonella typhi CT18 DNA polymerase III subunits gamma and tau DNA polymerase III subunits gamma and tau	DNA polymerase III, tau and gamma subunits; DNA elongation factor III	DNA polymerase III subunit gamma/tau	Similar to: HI1229, DP3X_HAEIN DNA polymerase III subunit gamma/tau	DNA polymerase III, gamma/tau subunits DnaX protein	DNA polymerase III subunit tau	ortholog to Escherichia coli bnum: b0470; MultiFun: Information transfer 2.1.1 DNA polymerase III, tau and gamma subunits	AAA ATPase, central region	DNA elongation factor III; Code: L; COG: COG2812 DNA polymerase III tau and gamma subunits	DNA-directed DNA polymerase III, gamma/tau subunit	DNA elongation factor III; Code: L; COG: COG2812 DNA polymerase III tau and gamma subunits	
ECOLI00447	UPF0133 protein ybaB	Hypothetical cytosolic protein	Putative uncharacterized protein	UPF0133 protein PD_1058	UPF0133 protein slr1847	UPF0133 protein XCC1002	UPF0133 protein HI0442	identified by match to TIGR protein family HMM TIGR00103 hypothetical protein	UPF0133 protein CT0805	UPF0133 protein SAV_4556	UPF0133 protein SYNW0027	UPF0133 protein PMM0020	UPF0133 protein CPE0046	UPF0133 protein EF_2780	UPF0133 protein CC_0268	UPF0133 protein RC1337	UPF0133 protein NMB1444	UPF0133 protein PM0205	UPF0133 protein PA1533	UPF0133 protein TM_0687	UPF0133 protein VV2410	UPF0133 protein DR_0199	UPF0133 protein LA_4332	UPF0133 protein Atu0095	UPF0133 protein ybaB	UPF0133 protein alr5067	UPF0133 protein BA_0020/GBAA_0020/BAS0022	UPF0133 protein DP1429	UPF0133 protein lmo2703	
ECOLI00448	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	identified by match to PFAM protein family HMM PF03731 recombination protein RecR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	Recombination protein recR	
ECOLI00449	Chaperone protein htpG	Heat shock protein 90 homolog [Source:GeneDB_Spombe;Acc:SPAC926.04c]	similar to sp|P15108 Saccharomyces cerevisiae YMR186w HSC82 heat shock protein, start by similarity	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	Heat shock protein	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	Heat shock protein HtpG	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	Heat shock protein HtpG	Chaperone protein htpG	Heat shock protein	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	Chaperone protein htpG	putative heat shock protein HtpG	Chaperone protein htpG	Chaperone protein htpG	
ECOLI00450	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase 1	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	identified by match to PFAM protein family HMM PF03937 adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	Adenylate kinase	
ECOLI00452	Acetyl esterase	Acetyl esterase	Similar to lipase LipA	Acetyl esterase	acetyl esterase, putative	Acetyl esterase	Residues 1 to 272 of 272 are 98 pct identical to residues 1 to 272 of a 319 aa protein from Escherichia coli K12 ref: NP_415009.1 putative lipase	Similar to lipase LipA	Esterase	PROBABLE LIPASE/ESTERASE LIPN	Mb2994c, lipN, len: 376 aa. Equivalent to Rv2970c, len: 376 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 376 aa overlap). Probable lipN, lipase/esterase (EC 3.1.1.-), similar to others e.g.  Q9AA37|CC0771 PUTATIVE ESTERASE from Caulobacter crescentus (380 aa), FASTA scores: opt: 822, E(): 8e-46, (42.15% identity in 318 aa overlap); Q9XDR4 ESTERASE HDE from petroleum-degrading bacterium HD-1 (317 aa), FASTA scores: opt: 738, E(): 2e-40, (48.85% identity in 262 aa overlap); O52270 LIPASE from Pseudomonas sp. (strain B11-1) (308 aa), FASTA scores: opt: 683, E(): 7.3e-37, (41.3% identity in 288 aa overlap); etc. Also similar to P71668 HYPOTHETICAL 34.1 KDA PROTEIN from Mycobacterium tuberculosis (320 aa), FASTA scores: opt: 715, E(): 6.3e-39, (42.3% identity in 298 aa overlap). Equivalent to AAK47374 from Mycobacterium tuberculosis strain CDC1551 (309 aa) but longer 67 aa. PROBABLE LIPASE/ESTERASE LIPN	IPR000379: Esterase/lipase/thioesterase; IPR002168: Lipolytic enzyme acetyl esterase	similar to Salmonella typhi CT18 acetyl esterase acetyl esterase	hypothetical protein, similar to lipase LipA	Ortholog of S. aureus MRSA252 (BX571856) SAR0665 putative esterase	hypothetical protein, similar to lipase LipA	Acetyl esterase	esterase	Lipolytic enzyme	Internal region of the CDS is similar to an internal region of Rhodococcus sp heroin esterase Her TR:O06441 (EMBL:U70619) (322 aa) fasta scores: E(): 1.3e-12, 28.017% id in 232 aa, and the C-terminal region of Clostridium perfringens lipase LipA TR:Q9XDU5 (EMBL:AB028629) (311 aa) fasta scores: E(): 6e-34, 39.163% id in 263 aa putative esterase	esterase / lipase	Code: I; COG: COG0657 putative lipase	identified by match to protein family HMM PF07859 lipase/esterase	Code: I; COG: COG0657 putative lipase	putative lipase/esterase identified by match to protein family HMM PF07859	probable lipase	Esterase/lipase/thioesterase	Lipolytic enzyme	Acetyl esterase	
ECOLI00451	Ferrochelatase	Ferrochelatase	ferrochelatase, putative	Ferrochelatase	Ferrochelatase	Ferrochelatase	identified by match to PFAM protein family HMM PF03982 ferrochelatase	Ferrochelatase	Ferrochelatase	Ferrochelatase	Ferrochelatase	Ferrochelatase	Ferrochelatase	Ferrochelatase	Ferrochelatase	Ferrochelatase	Ferrochelatase 2	Ferrochelatase	Ferrochelatase	Ferrochelatase 2	Ferrochelatase 2	Ferrochelatase	Putative ferrochelatase	Ferrochelatase	Ferrochelatase	Ferrochelatase	identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109 ferrochelatase	identified by match to TIGR protein family HMM TIGR00109 ferrochelatase	Ferrochelatase	
ECOLI00453	Inosine-guanosine kinase	Inosine-guanosine kinase	Putative inosine-guanosine kinase	Inosine-guanosine kinase	Inosine-guanosine kinase	Inosine-guanosine kinase	Inosine-guanosine kinase	Inosine-guanosine kinase	Inosine-guanosine kinase	Residues 1 to 434 of 434 are 99 pct identical to residues 1 to 434 of a 434 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286218.1 inosine-guanosine kinase	Inosine-guanosine kinase	Inosine-guanosine kinase	IPR002173: Carbohydrate kinase, PfkB inosine-guanosine kinase	similar to Salmonella typhi CT18 inosine-guanosine kinase inosine-guanosine kinase	Inosine-guanosine kinase	inosine-guanosine kinase	Inosine-guanosine kinase	Code: G; COG: COG0524 inosine-guanosine kinase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7721718; Product type e : enzyme inosine-guanosine kinase	Code: G; COG: COG0524 inosine-guanosine kinase	Code: G; COG: COG0524 inosine-guanosine kinase	Inosine-guanosine kinase	Inosine kinase	Inosine kinase	Inosine-guanosine kinase	Inosine kinase	Inosine-guanosine kinase	Inosine-guanosine kinase	inosine-guanosine kinase identified by match to protein family HMM PF00294	
ECOLI00454	Inner membrane protein ybaL	Putative uncharacterized protein	Cation:proton antiporter	Cation:proton antiporter	Probable potassium efflux transporter	Putative transport protein	Related to potassium efflux transporter	Putative efflux pump/antiporter	Hypothetical protein ybaL	Putative transport protein	best DB hits: BLAST: pir:T37039; hypothetical protein SCJ12.22 - Streptomyces coelicolor; E=6e-05 swissprot:P39066; ACUB_BACSU ACETOIN UTILIZATION ACUB PROTEIN; E=0.016 pir:T36952; conserved hypothetical protein SCJ1.19c - Streptomyces; E=0.021 COG: BS_acuB; COG0517 CBS domains; E=0.002 PFAM: PF00999; Sodium/hydrogen exchanger fami; E=0.024 PF00571; CBS domain; E=0.00084 conserved hypothetical protein	Putative potassium efflux system protein	Putative transport protein	Putative glutathione-regulated potassium-efflux system protein	potassium-efflux system protein	Potassium-efflux system protein	Residues 1 to 558 of 558 are 99 pct identical to residues 1 to 558 of a 558 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286219.1 putative transport protein	Putative potassium antiporter	Probable cation-efflux system transmembrane protein	Similar to putative transport protein YbaL of Escherichia coli	Similar to glutathione-regulated potassium-efflux system protein kefC (K(+)/H(+) antiporter) hypothetical protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark cation:proton antiporter	putative CPA2 family transport protein	similar to Salmonella typhi CT18 putative transport protein putative transport protein	Cation:proton antiporter	Potassium-efflux system protein	CPA2 family K+/H+ antiporter, CAMP induced rosB subunit	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transport protein (CPA2 family )	Putative CPA2 family transport protein	
ECOLI00455	Fosmidomycin resistance protein	Putative membrane efflux protein	Putative fosmidomycin resistance protein	Conserved hypothetical membrane protein	hypothetical protein	Transporter	Fosmidomycin resistance protein, putative	Fosmidomycin resistance protein	Fosmidomycin resistance protein	Fosmidomycin resistance protein	Putative membrane efflux protein	Fosmidomycin resistance protein	Fosmidomycin resistance protein	Putative fosmidomycin resistance protein	Fosmidomycin resistance protein	identified by match to protein family HMM PF00083 fosmidomycin resistance protein	similar to GB:X64063, SP:P28765, and PID:1335662; identified by sequence similarity; putative fosmidomycin resistance protein	Putative fosmidmycin resistance protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE FOSMIDOMYCIN RESISTANCE ANTIBIOTIC RESISTANCE TRANSMEMBRANE PROTEIN	Fosmidomycin resistance protein	fosmidmycin resistance protein	Fosmidomycin resistance protein	FOSMIDOMYCIN RESISTANCE PROTEIN	Fosmidomycin resistance protein	Putative uncharacterized protein	probable fosmidomycin resistance protein	Putative fosmidomycin resistance protein	Membrane efflux protein	SC9H11.04c, possible membrane efflux protein, len: 398 aa. Similar to many membrane efflux proteins including: Streptomyces lividans SW:CMLR_STRLI(EMBL:X59968) chloramphenicol resistance protein, CmlR (392 aa), fasta scores opt: 227 z-score: 239.8 E(): 6.8e-06 27.7% identity in 411 aa overlap and Escherichia coli SW:FSR_ECOLI(EMBL:D73370) fosmidomycin resistance protein, FsR (406 aa), fasta scores opt: 506 z-score: 524.2 E(): 9.8e-22 28.4% identity in 373 aa overlap. Contains multiple possible membrane spanning hydrophobic domains. Note that the C-terminal 37 aa of this protein are highly similar to CDS SC9H11.02c and SC9H11.03c. putative membrane efflux protein.	
ECOLI00456	Protein ushA	5'-nucleotidase	Putative uncharacterized protein	UDP-sugar hydrolase	5'-nucleotidase	Predicted orf	Protein ushA	5'-nucleotidase	Protein UshA	Putative 5'-nucleotidase	5'-nucleotidase	UDP-sugar hydrolase	5'-NUCLEOTIDASE	Putative uncharacterized protein	Nucleotidase	5'-nucleotidase	Residues 1 to 550 of 550 are 99 pct identical to residues 1 to 550 of a 550 aa protein from Escherichia coli K12 ref: NP_415013.1 UDP-sugar hydrolase (5'-nucleotidase)	pseudo	Probable 5'-nucleotidase	5'-nucleotidase	Protein UshA	hypothetical protein	UDP-sugar diphosphatase	5'-nucleotidase, putative	nucleotidase	putative UDP-sugar hydrolase	IPR004843: Metallo-phosphoesterase; IPR006146: 5'-Nucleotidase, N-terminal; IPR006179: 5'-Nucleotidase and apyrase;IPR008334: 5'-Nucleotidase, C-terminal UDP-sugar hydrolase 5'-nucleotidase	similar to Salmonella typhimurium UDP-sugar hydrolase 5'-nucleotidase UDP-sugar hydrolase 5'-nucleotidase	hypothetical protein, similar to 5'-nucleotidase	
ECOLI00457	Uncharacterized protein ybaK	Regulatory protein	YbaK/EbsC protein	Transcriptional regulator	Uncharacterized protein HI1434	Putative transcription regulator	Putative transcriptional regulator	Putative uncharacterized protein	Probable transcriptional regulator	Protein ebsC	Transcriptional regulator, putative	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized conserved protein	Putative uncharacterized protein	Putative uncharacterized protein STY0541	All0659 protein	YbaK/ebsC family protein	Probable transcription regulator	Lmo0790 protein	Uncharacterized ACR	Putative transcription regulator	Regulatory protein	Probable transcriptional regulator	Putative uncharacterized protein	hypothetical protein ybaK	Putative uncharacterized protein	Protein ybaK	
ECOLI00458	Uncharacterized protein ybaP	Putative uncharacterized protein	Putative uncharacterized protein VV0941	Putative uncharacterized protein STY0542	hypothetical protein	Hypothetical protein ybaP	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein VP0753	Putative ligase	CDS_ID OB0924 hypothetical protein	Putative uncharacterized protein	Residues 1 to 264 of 264 are 99 pct identical to residues 1 to 264 of a 264 aa protein from Escherichia coli K12 ref: NP_415015.1 putative ligase	Putative uncharacterized protein	Similar to putative ligase YbaP of Escherichia coli	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	COG3735 conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	Code: S; COG: COG3735 putative ligase	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	conserved hypothetical protein	Code: S; COG: COG3735 putative ligase	GumN	GumN protein identified by match to protein family HMM PF07446	
ECOLI00459	Uncharacterized HTH-type transcriptional regulator ybaQ	Virulence associated protein	Uncharacterized HTH-type transcriptional regulator HI1251	Virulence-associated protein, putative	Putative uncharacterized protein	Virulence-associated protein	Plasmid maintenance system antidote protein	Putative HTH-type transcriptional regulator ybaQ	DNA-binding protein	Antitoxin higA-1	Plasmid maintenance system antidote protein HigA	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Virulence-associated protein, putative	Putative uncharacterized protein ybaQ	similar to L31763-11|AAB00945.1| percent identity: 51 in 96 aa putative virulence-associated protein	hypothetical protein	Virulence-associated protein I	Possible plasmid maintenance system antidote protein	Virulence-associated protein a	Residues 1 to 131 of 131 are 97 pct identical to residues 1 to 131 of a 131 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286224.1 orf, conserved hypothetical protein	Helix-turn-helix motif	Helix-turn-helix motif protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark virulence associated protein	Similar to: HI1251, YC51_HAEIN predicted plasmid maintenance system antidote protein	Toxin-antitoxin stability system antidote protein	plasmid maintenance system antidote protein	virulence associated protein	Code: R; COG: COG3093 conserved hypothetical protein	Code: R; COG: COG3093 conserved hypothetical protein	
ECOLI00460	Copper-exporting P-type ATPase A	similar to sp|P38995 Saccharomyces cerevisiae YDR270w CCC2 probable copper-transporting ATPase, start by similarity	Cation transporting ATPase	Heavy-metal transporting P-type ATPase related protein	hypothetical cation-transporter ATPase	Putative cation-transporting ATPase	Copper-exporting P-type ATPase A	hypothetical cation-transporting ATPase	Copper-transporting P-type ATPase	Copper-translocating P-type ATPase	Copper-transporting P-type ATPase	Heavy-metal transporting P-type ATPase	Copper-exporting P-type ATPase A	Residues 1 to 834 of 834 are 99 pct identical to residues 1 to 834 of a 834 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286225.1 putative ATPase	Copper-exporting P-type ATPase A	Copper-transporting P-type ATPase	identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525 copper-translocating P-type ATPase	copper-transporting ATPase	IPR000150: Cof protein; IPR000695: H+ transporting ATPase, proton pump; IPR001756: Copper-transporting ATPase;IPR001757: ATPase, E1-E2 type;IPR006121: Heavy metal transport/detoxification protein;IPR006191: Heavy metal binding putative copper-transporting ATPase	similar to Salmonella typhi Ty2 copper-transporting ATPase copper-transporting ATPase	Putative uncharacterized protein	Putative uncharacterized protein gbs0421	Copper-transporting ATPase	identified by match to PFAM protein family HMM PF00122 copper-transporter ATPase CopA	Putative Cu2+ exporting P-type ATPase	Putative cation-transporting ATPase	truncated copper-transporting P-type ATPase	copper-exporting ATPase	Similar to: HI0290, Y290_HAEIN probable cation-transporting ATPase	
ECOLI00461	Glutaminase 1	Glutaminase	Glutaminase 2	Glutaminase	Glutaminase	Glutaminase 2	Glutaminase	Glutaminase 1	glutaminase, putative	Glutaminase 1	similar to Z81465-5|CAC42253.1| percent identity: 36 in 335 aa putative glutaminase	Probable glutaminase	Residues 1 to 310 of 310 are 98 pct identical to residues 1 to 310 of a 310 aa protein from Escherichia coli K12 ref: NP_415018.1 putative glutaminase	similar to glutaminase hypothetical protein	Molecular Function: glutaminase activity (GO:0004359), Biological Process: glutamine metabolism (GO:0006541) Glutaminase	similar to BRA0340, glutaminase, hypothetical hypothetical glutaminase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative glutaminase	Similar to Rhizobium etli thermolabile glutaminase GlsA SWALL:GLSA_RHIET (SWALL:O87405) (309 aa) fasta scores: E(): 2.1e-27, 31.71% id in 309 aa, and to Bacteroides thetaiotaomicron putative glutaminase BT2571 SWALL:AAO77678 (EMBL:AE016936) (321 aa) fasta scores: E(): 4.6e-105, 84.11% id in 321 aa, and to Shigella flexneri putative glutaminase YbaS or SF0430 SWALL:AAN42085 (EMBL:AE015075) (310 aa) fasta scores: E(): 1.5e-49, 44.51% id in 310 aa putative glutaminase	identified by match to protein family HMM PF04960 glutaminase	glutaminase	Code: E; COG: COG2066 putative glutaminase	Glutaminase	Code: E; COG: COG2066 putative glutaminase	Glutaminase	glutaminase	Probable glutaminase YbaS	Glutaminase	Probable glutaminase YbaS	transcript_id=ENSOGAT00000003036	
ECOLI00462	Inner membrane transport protein ybaT	Putative amino acid transporter protein	Hypothetical transport protein ybaT	Putative amino acid/amine transport protein	Residues 1 to 430 of 430 are 98 pct identical to residues 1 to 430 of a 430 aa protein from Escherichia coli K12 ref: NP_415019.1 putative amino acid-amine transport protein	identified by similarity to SP:P77400; match to protein family HMM PF00324 amino acid permease	, predicted protein, len = 467 aa, possibly amino acid transporter aap10ld; predicted pI = 8.1297; reasonable similarity to several amino acid transporters; contains 9 probable transmembrane helices (aa 20-42, 62-81, 127-149, 203-225, 265-287, 307-329, 333-352, 372-394 and 398-420) amino acid permease/transporter, putative	Code: E; COG: COG0531 putative amino acid/amine transport protein	identified by similarity to SP:P39570; match to protein family HMM PF01490; match to protein family HMM PF03845; match to protein family HMM TIGR00912 putative spore germination protein	Code: E; COG: COG0531 putative amino acid/amine transport protein	Code: E; COG: COG0531 putative amino acid/amine transport protein	Hypothetical amino acid transporter YbaT protein	amino acid transporter	Amino acid permease-associated region precursor	Hypothetical transport protein YbaT	amino acid permease	amino acid permease COG0531 Amino acid transporters	transcript_id=ENSEEUT00000008798	transcript_id=ENSMLUT00000015437	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: eli:ELI_04575 amino acid permease	amino acid permease/transporter, putative	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: mmc:Mmcs_2649 amino acid permease-associated region	putative amino acid/amine transport protein Code: E; COG: COG0531	amino acid permease/transporter, putative previous systematic id LinJ11.0520	Amino acid transporter	predicted transporter	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: mmc:Mmcs_2649 amino acid permease-associated region	transcript_id=ENSMICT00000003691	Amino acid permease family protein	
ECOLI00463	HTH-type transcriptional regulator cueR	Transcriptional regulator, MerR family	Predicted transcriptional regulator	HTH-type transcriptional regulator cueR	Transcriptional regulator, MerR family	Transcriptional regulator, MerR family	Transcriptional regulator, MerR family	hypothetical SoxR, transcriptional regulators	HTH-type transcriptional regulator cueR	identified by match to protein family HMM PF00376 transcriptional regulator, MerR family	HTH-type transcriptional regulator cueR	Transcriptional regulator, MerR family	Copper efflux regulator	Transcriptional regulator, MerR family	HTH-type transcriptional regulator cueR	transcriptional regulator	SCE39.25c, possible merR-family transcriptional regulator, len: 150 aa; similar to many e.g. SW:MERR_BACSR MerR, mercury resistance operon transcriptional regulator from Bacillus subtilis (132 aa) fasta scores; opt: 201, z-score: 245.2, E(): 2.4e-06, (40.3% identity in 77 aa overlap) and SW:TIPA_STRLI TipA, transcriptional activator of a thiostrepton-induced gene in Streptomyces lividans (253 aa) fasta scores; opt: 196, z-score: 235.4, E(): 8.4e-06, (35.5% identity in 107 aa overlap). Contains Pfam match to entry PF00376 merR, Bacterial regulatory proteins, merR family and Prosite match to PS00552 Bacterial regulatory proteins, merR family signature. Also contains probable helix-turn-helix (+3.27 SD) 13-34 aa putative merR-family transcriptional regulator	Predicted transcriptional regulator	Residues 1 to 135 of 135 are 100 pct identical to residues 1 to 135 of a 135 aa protein from Escherichia coli K12 ref: NP_415020.1 putative transcriptional regulator	HTH-type transcriptional regulator cueR	Similar to putative transcriptional regulator YbbI of Escherichia coli	identified by match to protein family HMM PF00376; match to protein family HMM TIGR02044 Cu(I)-responsive transcriptional regulator	Putative DNA binding protein	IPR000551: Bacterial regulatory protein, MerR family putative heavy metal transcriptional repressor (MerR family)	similar to Salmonella typhi CT18 copper efflux regulator copper efflux regulator	Putative merR family copper regulatory protein, cueR	transcriptional regulator, MerR family	Predicted transcriptional regulators SoxR protein	HTH-type transcriptional regulator cueR	
ECOLI00464	Inner membrane protein ybbJ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Hypothetical protein ybbJ	conserved hypothetical protein	identified by Glimmer2; putative conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	NODULATION PROTEIN NFED, C-terminal only	Putative uncharacterized protein VP0804	Putative uncharacterized protein ybbJ	hypothetical protein	Putative uncharacterized protein	Membrane protein	Residues 1 to 152 of 152 are 100 pct identical to residues 1 to 152 of a 152 aa protein from Escherichia coli gb: AAB40242.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to unknown protein YbbJ of Escherichia coli	
ECOLI00465	Protein qmcA	Bll7750 protein	Uncharacterized protein C16G5.07c [Source:GeneDB_Spombe;Acc:SPBC16G5.07c]	Stomatin like protein	Inner membrane protein	Uncharacterized protein slr1128	Putative uncharacterized protein	Bifunctional short chain isoprenyl diphosphate synthase	DEHA2B11462p;similar to uniprot|O60121 Schizosaccharomyces pombe SPBC16G5 SPBC16G5.07c protein;	298aa long hypothetical membrane protein	Putative secreted protein	Putative uncharacterized protein	Band 7 protein:Stomatin	Stomatin-like protein	Putative uncharacterized protein CPE1060	Band 7/Mec-2 family protein	Putative uncharacterized protein	Stomatin/Mec-2 family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protease	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Alr2472 protein	SPFH domain/Band 7 family protein	Putative uncharacterized protein	Membrane protease subunits, stomatin/prohibitin homologs	
ECOLI00466	Uncharacterized ABC transporter ATP-binding protein ybbL	Putative ABC transport system, ATP-binding protein	Hypothetical ABC transporter ATP-binding protein ybbL	ABC transporter, ATP-binding protein	Putative ATP-binding component of a transport system	Residues 1 to 225 of 225 are 99 pct identical to residues 1 to 225 of a 225 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286239.1 putative ATP-binding component of a transport system	Probable atp-binding abc transporter protein	similar to Salmonella typhi CT18 putative ABC transporter ATP-binding protein putative ABC transporter ATP-binding protein	hypothetical protein, similar to ABC transporter (ATP-binding protein)	Ortholog of S. aureus MRSA252 (BX571856) SAR2544 ABC transporter ATP-binding protein	Putative ABC-type sugar/spermidine/putrescine transport system, ATPase component	Code: R; COG: COG4619 putative ATP-binding component of a transport system	identified by match to protein family HMM PF00005 ABC transporter, ATP-binding protein	Code: R; COG: COG4619 putative ATP-binding component of a transport system	ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	Code: R; COG: COG4619 putative ATP-binding component of a transport system	ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	Hypothetical ABC transporter ATP-binding protein YbbL	ABC transporter related	ABC transporter, ATP-binding protein, putative	Putative ATP-binding component of a transport system	ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	putative ATP-binding component of a transport system Code: R; COG: COG4619	putative ATP-binding component of a transport system	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Putative ATP-binding component of a transport system	Putative uncharacterized protein	ABC transporter, ATP-binding protein	
ECOLI00467	UPF0014 inner membrane protein ybbM	UPF0014 membrane protein MJ0938	ABC transporter, ATP-binding protein	UPF0014 membrane protein slr1647	ABC transporter, permease protein	Membrane protein, putative	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	ABC-type uncharacterized transport system, permease component	Putative membrane protein	All3011 protein	Putative membrane protein	ABC transporter permease protein	YbbM family integral membrane protein	Probable membrane protein	Putative ABC transport system, membrane protein	hypothetical permease	identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245 membrane protein, putative	Membrane protein, putative	conserved hypothetical protein	PREDICTED PEMEASE	Membrane protein, putative	Conserved protein	Putative uncharacterized protein VP1159	Putative metal resistance protein	CDS_ID OB0447 hypothetical protein	
ECOLI00468	Uncharacterized protein ybbN	Thioredoxin domain-containing protein	Thioredoxin	Uncharacterized protein HI1159	Thioredoxin	Putative uncharacterized protein	Thioredoxin	Putative uncharacterized protein	Probable thioredoxin	Thioredoxin domain-containing protein	Putative thioredoxin	Thioredoxin-like protein	Putative thioredoxin protein	putative thioredoxin-like protein	Hypothetical protein ybbN	identified by match to PFAM protein family HMM PF03745 thioredoxin	Putative uncharacterized protein	Putative uncharacterized protein	Putative thioredoxin	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE THIOREDOXIN PROTEIN	Thioredoxin	Putative thioredoxin	Putative thioredoxin	THIOREDOXIN	Putative uncharacterized protein VP0806	Putative thioredoxin-like protein	thioredoxin	Possible thioredoxin	Thioredoxin	
ECOLI00469	Uncharacterized oxidoreductase ybbO	Probable short chain dehydrogenase	Oxidoreductase, short-chain dehydrogenase/reductase family	Short chain dehydrogenase	Hypothetical oxidoreductase	Hypothetical oxidoreductase ybbO	Probable short chain dehydrogenase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE OXIDOREDUCTASE PROTEIN	Probable short-chain type dehydrogenase/reductase vdlC	Oxidoreductase, short-chain dehydrogenase/reductase family	Putative oxidoreductase	similar to oxidoreductase, short-chain dehydrogenase/reductase	Residues 1 to 269 of 269 are 98 pct identical to residues 1 to 269 of a 269 aa protein from Escherichia coli K12 ref: NP_415026.1 putative oxidoreductase	Probable short-chain dehydrogenase	Similar to hypothetical oxidoreductase YbbO of Escherichia coli	oxidoreductase, short-chain dehydrogenase/reductase family	IPR002198: Short-chain dehydrogenase/reductase SDR; IPR002347: Glucose/ribitol dehydrogenase; IPR003560: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase putative oxidoreductase	similar to Salmonella typhi CT18 hypothetical oxidoreductase hypothetical oxidoreductase	Probable short-chain dehydrogenase	Oxidoreductase, short-chain dehydrogenase/reductase family	short chain dehydrogenase	Oxidoreductase, short-chain dehydrogenase/reductase family	Putative oxidoreductase	Short-chain dehydrogenase/reductase family enzyme	Code: IQR; COG: COG1028 putative oxidoreductase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8344521, 9812981, 8944761; Product type e : enzyme 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase	pfam00106, adh_short, short chain dehydrogenase.  COG0300, DltE, Short-chain dehydrogenases. COG4221, Short-chain alcohol dehydrogenase. COG1028, FabG, Dehydrogenases. Probable short-chain dehydrogenase/reductase	Code: IQR; COG: COG1028 putative oxidoreductase	
ECOLI00470	Acyl-CoA thioesterase I	Lipase/acylhydrolase, putative	Acyl-CoA thioesterase I	Acyl-CoA thioesterase I	Acyl-CoA thioesterase I	Lysophospholipase L1	Acyl-CoA thioesterase	Esterase	Acyl-coA thioesterase I	Related arylesterase	Putative acyl-CoA thioesterase	putative arylesterase	Lipase/acylhydrolase domain protein	Acyl-CoA thioesterase I precursor	identified by match to PFAM protein family HMM PF00657 lipase/acylhydrolase domain protein	Lipase, GDSL family	Arylesterase	Acyl-CoA thioesterase I	Acyl-CoA thioesterase I	Acyl-CoA thioesterase I, putative	Acyl-CoA thioesterase I	Putative uncharacterized protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ACYL-COA THIOESTERASE I PROTEIN	Acyl-CoA thioesterase I	Acyl-CoA thioesterase I	Acyl-CoA thioesterase I	ARYLESTERASE	Arylesterase	Acyl-CoA thioesterase I; also functions as protease I	
ECOLI00471	Uncharacterized ABC transporter ATP-binding protein ybbA	Hypothetical ABC transporter ATP-binding protein	putative ABC transporter ATP-binding protein	Hypothetical ABC transporter ATP-binding protein ybbA	ABC transporter, ATP-binding protein	Putative ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Uncharacterized ABC transporter ATP-binding protein ybbA	Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component	Residues 1 to 228 of 228 are 100 pct identical to residues 1 to 228 of a 228 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286244.1 putative ATP-binding component of a transport system	Putative ABC transporter ATP-binding protein	Probable atp-binding abc transporter protein	Probable ABC transporter ATP-binding protein YbbA	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR006073: GTP1/OBG putative ABC superfamily (atp_bind) transporter	similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein hypothetical ABC transporter ATP-binding protein	Putative ABC transporter ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein, putative	ABC-type transport system, ATPase component	Putative ABC superfamily (Atp_bind) transporter	identified by match to protein family HMM PF00005 ABC transporter, ATP-binding domain	identified by match to protein family HMM PF00005 ABC transporter, ATP-binding protein	Code: Q; COG: COG4181 putative ATP-binding component of a transport system	Code: Q; COG: COG4181 putative ATP-binding component of a transport system	ABC transporter related	ABC transporter, ATP-binding protein	putative ABC transporter ATP-binding protein	ABC transporter related	Code: Q; COG: COG4181 putative ATP-binding component of a transport system	
ECOLI00472	Uncharacterized ABC transporter permease ybbP	Membrane protein, putative	Oxidoreductase	Putative ABC transporter permease protein	Putative uncharacterized protein	Predicted ABC-type transport system, permease component	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	hypothetical permease	ABC-type transport system, permease component. 	Hypothetical protein ybbP	identified by match to protein family HMM PF02687 permease, putative	Putative uncharacterized protein	Putative inner membrane transport permease	Putative inner membrane transport permease	ABC transporter, permease, putative	Putative membrane protein	Permease, putative	Putative inner membrane transport permease	Putative ABC transporter permease	Putative permease	Putative ABC transport system permease protein	Putative oxidoreductase	Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component	Putative uncharacterized protein	Residues 1 to 731 of 759 are 99 pct identical to residues 1 to 731 of a 804 aa protein from Escherichia coli K12 ref: NP_415029.1 putative oxidoreductase	Putative permease	
ECOLI00473	Protein rhsD	Code: M; COG: COG3209 rhs core protein with extension	Rhs family protein	YD repeat protein	YD repeat protein TIGRFAM: YD repeat protein PFAM: RHS protein; YD repeat-containing protein KEGG: ecj:JW3566 rhsA element core protein RshA	Hypothetical protein	Conserved carbohydrate-binding protein, Rhs family	RhsD protein	RhsD element protein	YD repeat protein	YD repeat protein	Protein RhsA	RHS Repeat family protein	Protein RhsA	RHS-family protein	Rhs core protein	RhsD element protein	RhsD element protein	RhsD protein	Predicted protein	YD repeat protein	RhsD element protein	RhsD element protein	
ECOLI00474	Uncharacterized protein ybbC	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein ybbC	Putative uncharacterized protein ybbC	YbbC protein	Predicted protein	Putative uncharacterized protein	
ECOLI00475	Putative uncharacterized protein ylbH	Conserved protein, rhs-like protein	Putative truncated Rhs core protein	Putative uncharacterized protein ylbH	Putative uncharacterized protein ylbH	YlbH protein	Conserved protein, rhs-like protein	
ECOLI00476	Putative uncharacterized protein ybbD	YbbD protein	Predicted protein	
ECOLI00478	Putative uncharacterized protein ylbG	Uncharacterized protein ylbG	Similar to unknown protein YlbG of Escherichia coli	conserved hypothetical protein	orf conserved hypothetical protein	Integrase, catalytic region	Predicted DNA-binding transcriptional regulator	Putative uncharacterized protein	Putative regulator with homeodomain-like DNA binding domain	Putative regulator with homeodomain-like DNA binding domain	YlbG protein	Predicted DNA-binding transcriptional regulator	predicted DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	
ECOLI00479	tRNA 2-selenouridine synthase	Putative uncharacterized protein	Putative uncharacterized protein	Probable ATP /GTP binding protein	tRNA 2-selenouridine synthase	Putative rhodanese-like domain protein	tRNA 2-selenouridine synthase	Putative uncharacterized protein	Putative ATP/GTP binding protein	hypothetical ATPase	tRNA 2-selenouridine synthase	tRNA 2-selenouridine synthase	Rhodanese-like domain protein	tRNA 2-selenouridine synthase	tRNA 2-selenouridine synthase	tRNA 2-selenouridine synthase	PUTATIVE ATP /GTP BINDING PROTEIN	Rhodanese-like domain protein	tRNA 2-selenouridine synthase	Residues 1 to 364 of 364 are 97 pct identical to residues 1 to 364 of a 364 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286251.1 putative capsule anchoring protein	tRNA 2-selenouridine synthase	identified by similarity to GB:AAQ66871.1 conserved hypothetical protein	Predicted ATPase	GTP-binding protein	IPR001763: Rhodanese-like putative ATPase	similar to Salmonella typhi CT18 hypothetical ATP-binding protein hypothetical ATP-binding protein	conserved hypothetical protein	tRNA 2-selenouridine synthase	tRNA 2-selenouridine synthase	
ECOLI00480	HTH-type transcriptional activator allS	Hypothetical transcriptional regulator ybbS	Putative LysR-family transcriptional regulator	Putative LysR-family transcriptional regulator	Transcriptional regulator, LysR family	HTH-type transcriptional activator allS	Residues 1 to 308 of 308 are 98 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286252.1 putative transcriptional regulator LYSR-type	putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 hypothetical lysR-family transcriptional regulator hypothetical lysR-family transcriptional regulator	HTH-type transcriptional activator allS	regulatory protein, LysR:LysR, substrate-binding	Transcriptional regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Transcriptional regulator, LysR family	HTH-type transcriptional activator allS	HTH-type transcriptional activator allS	transcriptional regulator, LysR family protein COG0583 Transcriptional regulator	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bcn:Bcen_0760 transcriptional regulator, LysR family	transcriptional regulator, LysR family identified by match to protein family HMM PF00126; match to protein family HMM PF03466	Transcriptional regulator, LysR family	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	putative transcriptional regulator YbbS	Transcriptional regulator, LysR family	Transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein LysR; LysR substrate-binding KEGG: pen:PSEEN1649 transcriptional regulator, LysR family	DNA-binding transcriptional activator of the allD operon	Transcriptional regulator, LysR family	
ECOLI00481	Ureidoglycolate hydrolase	Ureidoglycolate hydrolase	Putative ureidoglycolate hydrolase	putative ureidoglycolate hydrolase	Ureidoglycolate hydrolase	similar to GP:15157491; identified by sequence similarity; putative ureidoglycolate hydrolase, putative	Putative ureidoglycolate hydrolase	Ureidoglycolate hydrolase	Putative ureidoglycolate hydrolase	Ureidoglycolate hydrolase	Ureidoglycolate hydrolase	ureidoglycolate hydrolase	Putative ureidoglycolate hydrolase	Residues 1 to 161 of 161 are 98 pct identical to residues 1 to 161 of a 161 aa protein from Escherichia coli K12 gi: 1786714 orf, conserved hypothetical protein	identified by similarity to SP:P77731; match to protein family HMM PF04115 Ureidoglycolate hydrolase	Ureidoglycolate hydrolase protein	ureidoglycolate hydrolase	similar to Salmonella typhimurium ureidoglycolate hydrolase ureidoglycolate hydrolase	similar to BR0507, ureidoglycolate hydrolase, hypothetical ureidoglycolate hydrolase, hypothetical	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme ureidoglycolate amidohydrolase(decarboxylating)	Ureidoglycolate hydrolase	Ureidoglycolate hydrolase	identified by match to protein family HMM PF04115 ureidoglycolate hydrolase	identified by match to protein family HMM PF04115 ureidoglycolate hydrolase	identified by similarity to SP:P77731; match to protein family HMM PF04115 ureidoglycolate hydrolase	Ureidoglycolate hydrolase	Ureidoglycolate hydrolase	pfam04115, Ureidogly_hydro, Ureidoglycolate hydrolase. COG3194, DAL3, Ureidoglycolate hydrolase. putative ureidoglycolate hydrolase	Code: F; COG: COG3194 conserved hypothetical protein	
ECOLI00482	HTH-type transcriptional repressor allR	Negative regulator of allantoin and glyoxylate utilization operons	HTH-type transcriptional repressor allR	Residues 1 to 271 of 271 are 99 pct identical to residues 1 to 271 of a 271 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286254.1 putative regulator	PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN	Mb1802c, -, len: 248 aa. Equivalent to Rv1773c, len: 248 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 248 aa overlap). Probable transcriptional regulator belonging to IclR family, similar to ICLR_ECOLI|P16528 acetate operon repressor from Escherichia coli (274 aa), FASTA scores: opt: 261, E(): 3.3e-10, (26.9% identity in 249 aa overlap). Also similar to Mycobacterium tuberculosis protein Rv1719|MTCY04C12.04 (40.2% identity in 244 aa overlap); and Rv2989. Start site chosen by homology, but may extend further upstream.  Contains possible helix-turn-helix motif at aa 37-58 (+3.24 SD). PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN	InterProMatches:IPR005473; regulator of the kip operon,Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355) transcriptional regulator (IclR family)	IPR005473: Bacterial transcription regulator, ICLR-like family putative regulatory protein	similar to Salmonella typhi CT18 negative regulator of allantoin and glyoxylate utilization operons negative regulator of allantoin and glyoxylate utilization operons	HTH-type transcriptional repressor allR	Code: K; COG: COG1414 putative regulator	Code: K; COG: COG1414 putative regulator	HTH-type transcriptional repressor allR	HTH-type transcriptional repressor allR	putative regulator Code: K; COG: COG1414	transcriptional regulator, IclR family	putative regulator of allantoin regulon YbbU	KdgR acetate operon repressor, IclR family	IclR family transcriptional regulator	Transcriptional regulator IclR	Regulatory protein, IclR	Transcriptional regulator AllR	DNA-binding transcriptional repressor	Transcriptional regulator AllR	Transcriptional regulator, IclR family	Transcriptional regulator AllR	Transcriptional regulator, IclR family	Putative uncharacterized protein	Transcriptional regulator AllR	
ECOLI00483	Glyoxylate carboligase	Putative glyoxylate carboligase	Glyoxylate carboligase	Glyoxylate carboligase	Glyoxylate carboligase	putative glyoxylate carboligase	Glyoxylate carboligase	Product confidence : putative Gene name confidence : putative putative glyoxylate carboligase protein	Glyoxylate carboligase	glyoxylate carboligase	Acetolactate synthase large subunit	SC2G5.22, gcl, probable glyoxylate carboligase, acetohydroxy acid synthase-pyruvate oxidase family,len:594aa; highly similar to SW:GCL_ECOLI glyoxylate carboligase from Escherichia coli (592 aa) fasta scores;opt: 2905, z-score: 3262. 8,E(): 0, (72.7% identity in 586aa overlap). Contains Pfam match to entry PF00205TPP_enzymes, Thiamine pyrophosphate enzymes, score 427.80, E-value 4.7e-132. Note: as with the Escherichia coli homologue, this CDS is located close to a glyoxylate induced protein of unknown function. putative glyoxylate carboligase	Residues 1 to 623 of 623 are 99 pct identical to residues 1 to 623 of a 623 aa protein from Escherichia coli gb: AAB40260.1 glyoxylate carboligase	Probable glyoxylate carboligase protein	similar to Salmonella typhi CT18 glyoxylate carboligase glyoxylate carboligase	Glyoxylate carboligase	Glyoxylate carboligase	identified by similarity to SP:P30146; match to protein family HMM PF00205; match to protein family HMM PF02776; match to protein family HMM TIGR01504 glyoxylate carboligase	Glyoxylate carboligase	Code: R; COG: COG3960 glyoxylate carboligase	Glyoxylate carboligase	Glyoxylate carboligase	Code: R; COG: COG3960 glyoxylate carboligase	Glyoxylate carboligase	Glyoxylate carboligase	glyoxylate carboligase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR01504	Glyoxylate carboligase	hypothetical protein similarity to COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase(Evalue: 1E-110)	Glyoxylate carboligase	
ECOLI00484	Hydroxypyruvate isomerase	Uncharacterized protein sll1304	Putative hydroxypyruvate isomerase	Putative uncharacterized protein	Hydroxypyruvate isomerase	Hydroxypyruvate isomerase	Hydroxypyruvate isomerase	best DB hits: BLAST: pir:A83457; conserved hypothetical protein PA1501 [imported] -; E=1e-11 gb:AAG59852.1; AF284750_1 (AF284750) HT036-ISO [Homo sapiens]; E=9e-10 swissprot:P36951; TRLC_DROME TRANSIENT RECEPTOR POTENTIAL LOCUS C; E=2e-09 COG: PA1501; COG1082 Predicted endonucleases; E=1e-12 conserved hypothetical protein-putative sugar phosphate isomerases/epimerases	Product confidence : putative Gene name confidence : putative putative hydroxypyruvate isomerase protein	hydroxypyruvate isomerase	Glyoxylate-induced protein	hypothetical protein	SC2G5.27c, possible oxidoreductase, len: 279 aa; similar to many, mostly hypotheticals including TR:O50580 (EMBL :AB000361) D-tagatose 3-epimerase from Pseudomonas cichorii (290 aa) fasta scores; opt: 164, z-score:193.0,E(): 0.0018 ,(26.8% identity in 142 aa overlap). Most similar to SW:GIP_ECOLI glyoxylate-induced protein from Escherichia coli (258 aa) fasta scores; opt: 411, z-score:473.6, E(): 4.3e-19, (35.0% identity in 266 aa overlap). As with the Escherichia coli homologue, this CDS is located close to the CDS for gcl (SC2G5.22). putative oxidoreductase	Probable hydroxypyruvate isomerase protein	IPR000560: Histidine acid phosphatase glyoxylate-induced protein	similar to Salmonella typhi Ty2 hydroxypyruvate isomerase hydroxypyruvate isomerase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme hydroxypyruvate isomerase	Glyoxylate-induced protein	putative hydroxypyruvate isomerase protein	Hydroxypyruvate isomerase	Code: G; COG: COG3622 glyoxylate-induced protein	Hydroxypyruvate isomerase	Hydroxypyruvate isomerase COG3622	putative hydroxypyruvate isomerase similarity:fasta; with=UniProt:HYI_ECOLI (EMBL:ECGCL); Escherichia coli.; hyi; Hydroxypyruvate isomerase (EC 5.3.1.22).; length=258; id 49.412; 255 aa overlap; query 3-257; subject 3-257 similarity:fasta; with=UniProt:Q98N83_RHILO (EMBL:BA000012); Rhizobium loti (Mesorhizobium loti).; Mlr0252 protein.; length=265; id 56.439; 264 aa overlap; query 1-264; subject 1-264	Hydroxypyruvate isomerase	Hydroxypyruvate isomerase	hydroxypyruvate isomerase identified by match to protein family HMM PF01261	Hydroxypyruvate isomerase	Hydroxypyruvate isomerase PFAM: Xylose isomerase-like TIM barrel KEGG: bpm:BURPS1710b_2425 hydroxypyruvate isomerase	
ECOLI00485	2-hydroxy-3-oxopropionate reductase	Probable oxidoreductase	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase	putative oxidoreductase	2-hydroxy-3-oxopropionate reductase	Product confidence : putative Gene name confidence : hypothetical putative tartronate semialdehyde reductase protein	Putative oxidoreductase	probable oxidoreductase	Probable transmembrane 2-hydroxy-3-oxopropionate reductase oxidoreductase protein	IPR002204: 3-hydroxyisobutyrate dehydrogenase tartronic semialdehyde reductase	2-hydroxy-3-oxopropionate reductase homolog	2-hydroxy-3-oxopropionate reductase	Tartronic semialdehyde reductase	go_function: 2-hydroxy-3-oxopropionate reductase activity [goid 0008679]; go_process: D-galactarate metabolism [goid 0046393] 2-hydroxy-3-oxopropionate reductase, putative	identified by similarity to SP:P77161; match to protein family HMM PF03446; match to protein family HMM TIGR01505 2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase	putative oxidoreductase similarity:fasta; with=UniProt:GLXR_ECOLI (EMBL:U00096); Escherichia coli.; glxR; 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) (Tartronate semialdehyde reductase) (TSAR).; length=292; id 61.672; 287 aa overlap; query 1-287; subject 1-287 similarity:fasta; with=UniProt:Q89QG0_BRAJA (EMBL:BA000040); Bradyrhizobium japonicum.; Oxidoredutase.; length=295; id 68.056; 288 aa overlap; query 1-288; subject 2-289	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR01505	2-hydroxy-3-oxopropionate reductase	3-hydroxyisobutyrate dehydrogenase	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase	beta-hydroxyacid dehydrogenase periplasmic protein	
ECOLI00487	Putative allantoin permease	Transporter, NCS1 nucleoside transporter family	DEHA2G08426p;similar to uniprot|Q04895 Saccharomyces cerevisiae YIR028W DAL4 Allantoin permease or uniprot|P05316 Saccharomyces cerevisiae YBR021W FUR4 Uracil permease;	Cytosine/purines, uracil, thiamine, allantoin permease family protein	pseudo	Putative allantoin permease	Putative uncharacterized protein	IPR001248: Permease for cytosine/purines, uracil, thiamine, allantoin Putative allantoin permease	Putative NCS1 family, allantoin transport protein	go_component: membrane [goid 0016020]; go_function: allantoin permease activity [goid 0005274]; go_process: allantoin transport [goid 0015720] NCS1 allantoate transporter	Cytosine/uracil/thiamine/allantoin permeases. Nucleoside transporter, NCS1 family	Putative allantoin permease	hypothetical protein similarity to COG1953 Cytosine/uracil/thiamine/allantoin permeases(Evalue: 2E-50)	Putative allantoin permease	permease for cytosine/purines, uracil, thiamine, allantoin PFAM: permease for cytosine/purines, uracil, thiamine, allantoin KEGG: ccr:CC2347 cytosine/purines/uracil/thiamine/allantoin permease family protein	permease for cytosine/purines, uracil, thiamine, allantoin PFAM: permease for cytosine/purines, uracil, thiamine, allantoin KEGG: rsp:RSP_3174 nucleoside transporter, NCS1 family	putative allantoin transporter	Botrytis cinerea hypothetical protein	Lodderomyces elongisporus (LELG_04144.1) allantoin permease (translation)	ustilago_maydis hypothetical protein	Permease, cytosine/purines, uracil, thiamine, allantoin family	Permease for cytosine/purines uracil thiamine allantoin	Predicted allantoin transporter	Permease, cytosine/purines, uracil, thiamine, allantoin family	NCS1 nucleoside transporter family	Permease, cytosine/purine, uracil, thiamine, allantoin family	jgi|Lacbi1|248955|e_gww1.9.305.1	Putative uncharacterized protein	NCS1 nucleoside transporter family	
ECOLI00488	Allantoinase	allantoinase;	Allantoinase, converts allantoin to allantoate in the first step of allantoin degradation; expression sensitive to nitrogen catabolite repression.  [Source:SGD;Acc:S000001466]	similar to sp|P32375 Saccharomyces cerevisiae Allantoinase (EC 3.5.2.5) YIR027c DAL1, start by similarity	similar to sp|P32375 Saccharomyces cerevisiae YIR027c DAL1 allantoinase singleton, start by similarity	DEHA2C05786p;some similarities with uniprot|P32375 Saccharomyces cerevisiae YIR027C DAL1 Allantoinase;	Dihydroorotase	Allantoinase	Dihydroorotase	Allantoinase	Allantoinase	Allantoinase	Allantoinase	Dihydroorotase	Putative uncharacterized protein	Allantoinase	SCAH10.12, possible allantoinase, len: 445 aa; similar SW:ALLA_YEAST (EMBL:M69294) Saccharomyces cerevisiae, allantoinase 460 aa; fasta scores: opt: 1232 z-score: 1441.5 E():0 ; 48.3% identity in 408 aa overlap and to SW:ALLA_BACSU (EMBL:Z99120) Bacillus subtilis putative allantoinase (EC 3.5.2.5) YunH, 446 aa; fasta scores: opt: 973 z-score: 1139.0 E(): 0; 36.5% identity in 444 aa overlap. Contains match to Pfam entry PF00744 Dihydrooratase, Dihydroorotase-like putative allantoinase	InterProMatches:IPR011059 allantoinase	allantoinase	IPR005847: Dihydroorotase region allantoinase	similar to Salmonella typhi CT18 putative allantoinase putative allantoinase	Allantoinase	go_component: intracellular [goid 0005622]; go_function: allantoinase activity [goid 0004038]; go_process: allantoin catabolism [goid 0000256] allantoinase	identified by similarity to SP:P77671; match to protein family HMM PF01979; match to protein family HMM PF07969 putative allantoinase	Dihydroorotase or related cyclic amidohydrolase	Allantoinase	Dihydroorotase and related cyclic amidoHydrolase COG0044	
ECOLI00489	Putative purine permease ybbY	Putative purine permease ybbY	Putative transport	Xanthine/uracil/vitamin C permease family; Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) putative transporter YwdJ	IPR000531: TonB-dependent receptor protein putative transport protein	similar to Salmonella typhi CT18 putative permease protein putative permease protein	Putative transport protein	Putative purine permease YbbY	Putative purine permease YbbY	putative uracil/xanthine transporter	Putative nucleobase permease	YwdJ	Predicted uracil/xanthine transporter	Xanthine/uracil/vitamin C permease	Putative nucleobase permease	Xanthine/uracil/vitamin C permease	NCS2 family nucleobase:cation symporter-2	Xanthine/uracil permeases	Xanthine/uracil/vitamin C permease	Putative uncharacterized protein	Putative permease protein	Putative purine permease YbbY	Putative purine permease YbbY	Putative permease protein	Putative purine permease YbbY	Putative nucleobase permease	Putative purine permease YbbY	Putative permease protein	Putative uracil transport protein	
ECOLI00490	Glycerate kinase 1	Glycerate kinase	Glycerate kinase 1	Putative uncharacterized protein ybbZ	glycerate kinase II	similar to Salmonella typhi CT18 glycerate kinase glycerate kinase	Putative uncharacterized protein	best blastp match gb|AAK34611.1| (AE006615) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] conserved hypothetical protein	Glycerate kinase II	Glycerate kinase	Glycerate kinase	glycerate kinase	Glycerate kinase 1	Glycerate kinase	Glycerate kinase	Glycerate kinase 1	Glycerate kinase	Glycerate kinase PFAM: glycerate kinase KEGG: vvy:VVA1391 glycerate kinase	Glycerate kinase	Putative glycerate kinase	glycerate kinase II	KEGG: son:SO1770 glycerate kinase Glycerate kinase	Glycerate kinase	Glycerate kinase	Glycerate kinase II	Glycerate kinase	Glycerate kinase	Glycerate kinase	Glycerate kinase	
ECOLI00491	Uncharacterized protein ylbA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein STY0574	Hypothetical protein ylbA	identified by Glimmer2; putative conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical conserved hypothetical protein	Glyoxylate induced protein	Putative uncharacterized protein ylbA	hypothetical protein	Putative uncharacterized protein	Residues 1 to 217 of 223 are 97 pct identical to residues 1 to 217 of a 261 aa protein from Escherichia coli K12 ref: NP_415048.1 orf, conserved hypothetical protein	identified by similarity to GB:BAB51632.1; match to protein family HMM PF06038 conserved hypothetical protein	Putative uncharacterized protein	InterProMatches:IPR011051 conserved hypothetical protein	putative glyoxylate utilization	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	similar to BR0346, conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative glyoxylate utilization	Cupin domain containing protein, possibly involved in glyoxylate utilization	identified by match to protein family HMM PF06038; match to protein family HMM PF07883 conserved hypothetical protein	conserved hypothetical protein	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization. Cupin domain. Probable glyoxylate induced protein	protein of unknown function DUF861, cupin_3	protein of unknown function DUF861, cupin_3	protein of unknown function DUF861, cupin_3	
ECOLI00492	Allantoate amidohydrolase	Putative amino acid hydrolase	Allantoate amidohydrolase	Allantoate amidohydrolase	N-carbamoyl-L-amino acid amidohydrolase	Putative peptidase	Putative hydantoin utilization protein	N-carbamyl-L-amino acid amidohydrolase	N-carbamyl-L-amino acid amidohydrolase	SCE25.13c, probable amino acid hydrolase, len: 400 aa; similar to SW:AMB2_BACST (EMBL:S67784) Bacillus stearothermophilus N-carbamyl-L-amino acid amidohydrolase (EC 3.5.1.-) AmaB, 409 aa; fasta scores: opt: 733 z-score: 804.8 E(): 0; 34.7% identity in 404 aa overlap putative amino acid hydrolase	Residues 20 to 429 of 429 are 98 pct identical to residues 2 to 411 of a 411 aa protein from Escherichia coli K12 ref: NP_415049.1 putative hydantoin utilization protein	identified by similarity to SP:P37113; match to protein family HMM PF01546; match to protein family HMM TIGR01879 N-carbamyl-L-amino acid amidohydrolase, putative	N-carbamoyl-L-amino acid amidohydrolase protein	putative allointase/hydantoinase/amidohydrolase protein	allantoate amidohydrolase	similar to Salmonella typhi CT18 allantoate amidohydrolase allantoate amidohydrolase	identified by similarity to SP:Q01264; match to protein family HMM PF01546; match to protein family HMM TIGR01879 N-carbamoyl-L-amino acid amidohydrolase, putative	Allantoate amidohydrolase	Amidase, hydantoinase/carbamoylase	Allantoate amidohydrolase	Allantoate amidohydrolase	Amidase, hydantoinase/carbamoylase family	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase	putative hydantoin utilization protein Code: E; COG: COG0624	amidase, hydantoinase/carbamoylase family TIGRFAM: amidase, hydantoinase/carbamoylase family PFAM: peptidase M20 KEGG: ret:RHE_CH00350 probable N-carbamoyl-L-amino acid amidohydrolase protein	N-carbamoyl-L-amino acid hydrolase	N-carbamoyl-L-amino acid amidohydrolase	N-carbamoyl-L-amino acid amidohydrolase	Putative N-carbamoyl-L-amino-acid hydrolase	
ECOLI00493	Ureidoglycolate dehydrogenase	L-sulfolactate dehydrogenase	L-sulfolactate dehydrogenase	Malate dehydrogenase	L-sulfolactate dehydrogenase/(S)-hydroxyglutaric acid dehydrogenase	hypothetical malate dehydrogenase	Ureidoglycolate dehydrogenase	Dehydrogenase	Putative malate dehydrogenase	Ureidoglycolate dehydrogenase	Malate/L-lactate dehydrogenase	Ureidoglycolate dehydrogenase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE OXIDOREDUCTASE PROTEIN	Ureidoglycolate dehydrogenase	probable malate dehydrogenase	IPR001064: Beta and gamma crystallin ureidoglycolate dehydrogenase	similar to Salmonella typhi CT18 ureidoglycolate dehydrogenase ureidoglycolate dehydrogenase	L-sulfolactate dehydrogenase malate dehydrogenase	Ureidoglycolate dehydrogenase	malate/L-lactate dehydrogenase, putative	ComC putative L-sulfolactate dehydrogenase	(R)-2-hydroxyacid dehydrogenase	(R)-2-hydroxyacid dehydrogenase	transcript_id=ENSGACT00000004653	Putative malate/L-lactate dehydrogenase	Ureidoglycolate dehydrogenase	malate/L-lactate dehydrogenase	probable malate/L-lactate dehydrogenase	(R)-2-hydroxyacid dehydrogenase PFAM: Malate/L-lactate dehydrogenase KEGG: bcn:Bcen_3719 (R)-2-hydroxyacid dehydrogenase	
ECOLI00494	Protein fdrA	Protein fdrA	Involved in protein transport; multicopy suppressor of dominant negative ftsH mutants	InterProMatches:IPR002086; Biological Process: metabolism (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491) succinyl-CoA synthetase (alpha subunit)	IPR001993: Mitochondrial substrate carrier putative acyl-CoA synthetase, involved in protein transport	Putative acyl-CoA synthetase, involved in protein transport	involved in protein transport; Code: C; COG: COG0074 multicopy suppressor of dominant negative ftsH mutants	FdrA protein	Putative transport protein FdrA	putative transport protein FdrA	Bacterial FdrA protein	Predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain	Bacterial FdrA protein	FdrA family protein	Bacterial FdrA protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein FdrA	Protein FdrA	Protein FdrA	FdrA protein	Protein FdrA	Bacterial FdrA protein	Bacterial FdrA protein	pseudo	Putative uncharacterized protein	Putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain	Putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain	Putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain	


ECOLI00496	Uncharacterized protein ylbF	Hypothetical protein ylbF	Uncharacterized protein ylbF	Residues 1 to 195 of 195 are 98 pct identical to residues 77 to 271 of a 271 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286269.1 putative carboxylase	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	putative carboxylase	putative carboxylase	putative carboxylase	Putative uncharacterized protein	Putative uncharacterized protein ylbF	putative carboxylase	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative carboxylase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative uncharacterized protein ylbF	Putative cytoplasmic protein	Putative uncharacterized protein	
ECOLI00497	Carbamate kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase	Residues 1 to 297 of 297 are 98 pct identical to residues 1 to 297 of a 297 aa protein from Escherichia coli K12 ref: NP_415054.1 putative carbamate kinase	Carbamate kinase	IPR003964: Bacterial carbamate kinase putative carbamate kinase	similar to Salmonella typhi CT18 carbamate kinase carbamate kinase	carbamate kinase	Similar to: HI0595, ARCC_HAEIN carbamate kinase	Carbamate kinase	Putative carbamate kinase	identified by similarity to SP:P13982; match to protein family HMM PF00696; match to protein family HMM TIGR00746 carbamate kinase	carbamate kinase	Code: E; COG: COG0549 putative carbamate kinase	carbamate kinase TIGRFAMsMatches:TIGR00746	carbamate kinase identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746	Carbamate kinase	Putative carbamate kinase	carbamate kinase identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746	carbamate kinase	carbamate kinase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2537202; Product type e : enzyme	Aspartate/glutamate/uridylate kinase	putative carbamate kinase Code: E; COG: COG0549	
ECOLI00498	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase [Source:GeneDB_Spombe;Acc:SPCC1322.13]	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase, ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATP binding subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit , phosphoribosylglycinamide formyltransferase 2	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase related protein	Phosphoribosylaminoimidazole carboxylase	hypothetical phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase	Phosphoribosylaminoimidazole carboxylase, ATPase subunit	Phosphoribosylaminoimidazole carboxylase, ATPase subunit	Phosphoribosylaminoimidazole carboxylase, ATPase subunit	PurK	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase, ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase, ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase, ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit	
ECOLI00499	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase, catalytic subunit	Phosphoribosylaminoimidazole carboxylase	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase	Phosphoribosylaminoimidazole carboxylase, catalytic subunit	Putative phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase	Probable phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase	hypothetical phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase	Phosphoribosylaminoimidazole carboxylase	Phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase, catalytic subunit	Phosphoribosylaminoimidazole carboxylase, catalytic subunit	
ECOLI00500	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	Putative uncharacterized protein	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	Putative UDP-2,3-diacylglucosamine hydrolase	putative UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	Residues 1 to 240 of 240 are 98 pct identical to residues 1 to 240 of a 240 aa protein from Escherichia coli K12 ref: NP_415057.1 orf, conserved hypothetical protein	UDP-2,3-diacylglucosamine hydrolase	UDP-2,3-diacylglucosamine hydrolase	
ECOLI00501	Peptidyl-prolyl cis-trans isomerase B	Peptidyl-prolyl cis-trans isomerase slr1251	Peptidyl-prolyl cis-trans isomerase B	Peptidyl-prolyl cis-trans isomerase, cyclophilin type	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Probable peptidyl-prolyl cis-trans isomerase A	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase B	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase B	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	CDS_ID OB1360; ppiase B; rotamase B peptidyl-prolyl cis-trans isomerase B	similar to AL583917-10|CAC29519.1| percent identity: 76 in 175 aa putative peptidylprolyl isomerase	Peptidyl-prolyl cis-trans isomerase	SCH69.26c, probable peptidyl-prolyl cis-trans isomerase, len: 177aa; similar to many egs. TR:P77949 (EMBL:U64692) peptidyl-prolyl cis-trans isomerase from Streptomyces chrysomallus (175 aa) fasta scores; opt: 950, z-score: 1136.4, E(): 0, (78.3% identity in 175 aa overlap) and TR:O54168 (EMBL:AL021411) peptidyl-prolyl isomerase from Streptomyces coelicolor (157 aa) fasta scores; opt: 400, z-score: 486.8, E(): 8.8e-20, (50.0% identity in 124 aa overlap). Contains Pfam match to entry PF00160 pro_isomerase, Peptidyl-prolyl cis-trans isomerase. putative peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Residues 1 to 164 of 164 are 99 pct identical to residues 1 to 164 of a 164 aa protein from Escherichia coli K12 ref: NP_415058.1 peptidyl-prolyl cis-trans isomerase B (rotamase B)	
ECOLI00502	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	CYSTEINYL tRNA SYNTHETASE;08_0490, CYSTEINYL tRNA SYNTHETASE, SYC_PYRHO, gene found by Glimmer;	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase 1	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase	hypothetical cysteinyl-tRNA synthetase	
ECOLI00503	Inner membrane protein ybcI	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Hypothetical protein ybcI	Putative uncharacterized protein ybcI	Putative uncharacterized protein	Residues 1 to 169 of 169 are 96 pct identical to residues 1 to 173 of a 173 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286276.1 orf, conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative membrane-bound metal-dependent hydrolases	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane-bound metal-dependent hydrolases	conserved hypothetical protein	Code: R; COG: COG1988 conserved hypothetical protein	Code: R; COG: COG1988 conserved hypothetical protein	Code: R; COG: COG1988; orf conserved hypothetical protein	putative membrane protein	Predicted membrane-bound metal-dependent hydrolase	Putative membrane protein	conserved hypothetical protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Putative uncharacterized protein ybcI	Membrane-bound metal-dependent hydrolase inner membrane protein	membrane-bound metal-dependent hydrolase PFAM: membrane-bound metal-dependent hydrolase KEGG: pae:PA4962 hypothetical protein	Membrane-bound metal-dependent hydrolase inner membrane protein	Membrane protein	
ECOLI00504	Uncharacterized protein ybcJ	Asl3253 protein	Putative uncharacterized protein	Hypothetical protein ybcJ	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ybcJ	Residues 4 to 80 of 80 are 100 pct identical to residues 1 to 77 of a 77 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286277.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Similar to unknown protein YbcJ of Escherichia coli	Putative uncharacterized protein	IPR002942: RNA-binding S4 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	RNA-binding S4	Best Blastp Hit: emb|CAB83923.1| (AL162753) hypothetical protein NMA0633 [Neisseria meningitidis] conserved hypothetical protein	Code: S; COG: COG2501 conserved hypothetical protein	Putative RNA-binding protein	Code: S; COG: COG2501 conserved hypothetical protein	RNA-binding S4	conserved hypothetical protein	conserved hypothetical protein	
ECOLI00505	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Methylenetetrahydrofolate dehydrogenase	similar to GB:J02685, GB:J03603, GB:M31551, GB:M31547, GB:M31548, GB:M31549, GB:M31550, SP:P05120, PID:1567409, PID:189545, PID:189547, PID:189561, PID:189563, PID:340154, PID:35268, PID:386995, PID:641357, PID:641359, PID:641361,  and PID:641374; identified by sequence similarity; putative methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	Bifunctional protein folD	Bifunctional protein folD 2	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	Bifunctional protein folD	putative methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	
ECOLI00506	Sfm fimbrial protein, A chain	Sfm fimbrial protein, A chain	Residues 1 to 191 of 191 are 98 pct identical to residues 1 to 191 of a 191 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286279.1 putative fimbrial-like protein	major type 1 subunit fimbrin (pilin)	similar to Salmonella typhi CT18 type-1 fimbrial protein, a chain precursor type-1 fimbrial protein, a chain precursor	Type-1 fimbrial protein, A chain	Fimbrial protein	putative fimbrial-like protein Code: NU; COG: COG3539	Fimbrial protein precursor	Putative uncharacterized protein	Type-1 fimbrial protein homolog	Type-1 fimbrial protein	Predicted fimbrial-like adhesin protein	Type-1 fimbrial protein homolog	Fimbrial protein precursor	Type-1 fimbrial protein homolog	Putative uncharacterized protein	Putative uncharacterized protein	Type-1 fimbrial protein, a chain	Type-1 fimbrial protein, A chain	Type-1 fimbrial protein, A chain	Type-1 fimbrial protein, A chain	Type-1 fimbrial protein, a chain	Type-1 fimbrial protein, A chain	Type-1 fimbrial protein homolog	Type-1 fimbrial protein, A chain	Type-1 fimbrial protein, a chain	Putative fimbrial protein	Putative fimbrial-like adhesin protein	
ECOLI00507	Chaperone protein sfmC	Putative chaperone	Residues 1 to 230 of 230 are 98 pct identical to residues 1 to 230 of a 230 aa protein from Escherichia coli K12 ref: NP_415064.1 putative chaperone	similar to Salmonella typhi CT18 fimbrial chaperone protein fimbrial chaperone protein	Chaperone protein fimC	Pili assembly chaperone precursor	Putative uncharacterized protein	Chaperone protein FimC	Pilin chaperone, periplasmic	Chaperone protein FimC homolog	Pili assembly chaperone precursor	Chaperone protein FimC homolog	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Fimbrial chaperone protein	Chaperone protein FimC	Chaperone protein FimC	Chaperone protein FimC	Fimbrial chaperone protein	Chaperone protein FimC	Chaperone protein FimC homolog	Chaperone protein FimC	Fimbrial chaperone protein	Putative fimbrial chaperone	Pilin chaperone, periplasmic	Pilin chaperone, periplasmic	Pilin chaperone, periplasmic	Pilin chaperone, periplasmic	
ECOLI00508	Outer membrane usher protein sfmD	Putative outer membrane protein, export function	IPR000015: Fimbrial biogenesis outer membrane usher protein outer membrane usher protein	similar to Salmonella typhi CT18 outer membrane usher protein FimD precursor outer membrane usher protein FimD precursor	Outer membrane usher protein fimD	Fimbrial biogenesis outer membrane usher protein precursor	Putative uncharacterized protein	Predicted outer membrane export usher protein	Outer membrane usher protein fimD	Fimbrial biogenesis outer membrane usher protein precursor	Outer membrane usher protein SfmD	Putative uncharacterized protein	Putative uncharacterized protein	Outer membrane usher protein FimD	Fimbrial usher protein	Outer membrane usher protein SfmD	Outer membrane usher protein SfmD	Outer membrane usher protein FimD	Outer membrane usher protein SfmD	Outer membrane usher protein SfmD	Outer membrane usher protein SfmD	Outer membrane usher protein FimD	Putative fimbrial usher protein	Putative outer membrane export usher protein	Putative outer membrane export usher protein	Putative outer membrane export usher protein	Putative outer membrane export usher protein	Outer membrane usher protein FimD	SfmD protein	
ECOLI00509	Protein sfmH	Involved in fimbrial asembly	minor fimbrial subunit	similar to Salmonella typhi CT18 FimH protein precursor FimH protein precursor	Protein fimH	Code: NU; COG: COG3539 involved in fimbrial asembly	Minor fimbrial subunit precursor	Putative uncharacterized protein	Mannose binding protein FimH	Predicted fimbrial-like adhesin protein	Mannose binding protein FimH homolog	Involved in fimbrial asembly precursor	Mannose binding protein FimH homolog	Putative uncharacterized protein	Putative uncharacterized protein	FimH protein	Mannose binding protein FimH	Mannose binding protein FimH	Mannose binding protein FimH	FimH protein	Mannose binding protein FimH	Mannose binding protein FimH homolog	Mannose binding protein FimH	FimH protein	Putative fimbrial protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	
ECOLI00510	Fimbrial-like protein sfmF	Putative fimbrial protein	putative fimbrial protein	similar to Salmonella typhi CT18 fimbria-like protein FimF precursor fimbria-like protein FimF precursor	Fimbrial-like protein fimF	Code: NU; COG: COG3539 putative fimbrial-like protein	major fimbrial subunit protein identified by match to protein family HMM PF00419	putative fimbrial-like protein Code: NU; COG: COG3539	Fimbrial protein precursor	Predicted fimbrial-like adhesin protein	Fimbrial protein	Fimbrial protein precursor	Putative fimbrial protein	Putative uncharacterized protein	Putative uncharacterized protein	Fimbrial protein	Fimbria-like protein FimF	Fimbrial subunit	Major fimbrial subunit	Major fimbrial subunit	Major fimbrial subunit	Putative fimbrial protein in fimZ 5' region	Major fimbrial subunit	Major fimbrial subunit	Putative fimbrial protein in fimZ 5' region	Putative fimbrial protein	Fimbrial protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	
ECOLI00511	Fimbriae Z protein	Two-component response regulator RocA1	Putative fimbrial protein Z, transcriptional regulator	Probable transcriptional regulator	Virulence factors putative positive transcription regulator bvgA	Putative fimbrial protein Z, transcriptional regulator	Fimbriae Z protein	IPR000792: Bacterial regulatory protein, LuxR family; IPR001789: Response regulator receiver fimbrial protein Z, putative transcriptional regulator (LuxR/UhpA family)	similar to Salmonella typhi CT18 probable transcriptional regulator (FimXZ protein) probable transcriptional regulator (FimXZ protein)	Response regulator, LuxR family (CheY-HTH)	Fimbriae Z protein	regulatory protein, LuxR:Response regulator receiver	probable signal transducer; Code: TK; COG: COG2197 fimbrial Z protein	Hypothetical protein	Two component transcriptional regulator, LuxR family	DNA-binding response regulator, putative	probable two-component response regulator	putative response regulator, LuxR family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	fimbrial Z protein Code: TK; COG: COG2197	Two component transcriptional regulator, LuxR family	Fimbriae Z protein	Two component transcriptional regulator, LuxR family precursor	Fimbriae Z protein	Predicted DNA-binding transcriptional regulator	Fimbriae Z protein	Two component transcriptional regulator, LuxR family	Fimbriae Z protein	Putative uncharacterized protein	Putative uncharacterized protein	

ECOLI00512	Prophage DLP12 integrase	Site-specific recombinase, phage integrase family	Putative integrase for prophage CP-933H	SCE29.19c, probable integrase, len: 384aa; similar to many eg. SW:INTR_STRAM integrase from the integrated conjugative pSAM plasmid of Streptomyces ambofaciens (388 aa) fasta scores; opt: 445, z-score: 549.1, E(): 2.8e-23, (26.8% identity in 392 aa overlap). Contains Pfam match to entry PF00589 Phage_integrase, 'Phage' integrase family, score 88.00, E-value 1.9e-22. putative integrase	conserved gene Prophage dlp12 integrase	IPR002104: Phage integrase Int	similar to |9635493|ref|NP_059584.1| integrase [Enterobacteria phage P22] integrase	Prophage integrase	Phage integrase	phage integrase	Code: L; COG: COG0582 putative phage integrase	phage integrase	Phage integrase	phage integrase PFAM: phage integrase KEGG: mta:Moth_1796 phage integrase	Phage integrase	phage integrase family protein	phage integrase family protein PFAM: phage integrase family protein KEGG: gox:GOX2318 prophage integrase	site-specific recombinase, phage integrase family Integrase. INTEGRASE IS NECESSARY FOR INTEGRATION OF THE PHAGE INTO THE HOST GENOME BY SITE-SPECIFIC RECOMBINATION. IN CONJUNCTION WITH EXCISIONASE INTEGRASE IS ALSO NECESSARY FOR EXCISION OF THE PROPHAGE FROM THE HOST GENOME. Specificity unclear	phage integrase family protein PFAM: phage integrase family protein KEGG: lpp:lpp2123 hypothetical protein	site-specific recombinase, phage integrase family identified by match to protein family HMM PF00589	Hypothetical protein	phage integrase family protein PFAM: phage integrase family protein KEGG: gox:GOX2318 prophage integrase	putative integrase Code: L; COG: COG0582	phage integrase family protein	phage integrase family protein PFAM: phage integrase family protein KEGG: lpp:lpp2123 hypothetical protein	phage integrase family protein PFAM: phage integrase family protein KEGG: bps:BPSL3344 putative bacteriophage integrase	phage integrase PFAM: phage integrase KEGG: gox:GOX2318 prophage integrase	Integrase, phage-related protein	Phage-related integrase	
ECOLI00513	Putative uncharacterized protein ybCC	



ECOLI00515	Multidrug transporter emrE	Quaternary ammonium compound-resistance protein	SMR drug efflux transporter	Putative SMR family multidrug efflux transporter	Multidrug resistance protein	SMR multidrug efflux transporter	Quaternary ammonium compound-resistance protein	Putative multidrug transporter	Multidrug exporter	Multidrug resistance protein mmr	Quaternary ammonium compound-resistance protein	Putative multidrug efflux transporter	EmrE protein	quaternary ammonium compound-resistance protein	similar to GP:12024949, and GP:12024949; identified by sequence similarity; putative quaternary ammonium compound-resistance protein	Quaternary ammonium compound-resistance protein QacC, putative	Putative mebrane transport protein	Putative mebrane transport protein	Putative multidrug resistance protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by FrameD PUTATIVE METHYL VIOLOGEN/ETHIDIUM RESISTANCE TRANSMEMBRANE PROTEIN	Multidrug resistance protein	Putative mebrane transport protein	multidrug resistance protein EbrA homolog	Putative multi-drug efflux transporter	Multidrug resistance protein, SMR family	QUATERNARY AMMONIUM COMPOUND-RESISTANCE PROTEIN QACE	Methylviologen resistance protein encoded within prophage CP-933X	Membrane transporters of cations and cationic drugs	BH0841 protein	
ECOLI00516	Uncharacterized protein ybcK	Putative uncharacterized protein	Recombinase	site-specific recombinase	Putative recombinase	Resolvase domain	Resolvase, N-terminal domain	DLP12 prophage; predicted recombinase	Putative uncharacterized protein	Recombinase	Site-specific recombinase, resolvase family	Recombinase family protein	Putative phage recombinase	Putative site-specific invertase; DLP12 prophage	Recombinase	DLP12 prophage; predicted recombinase	Recombinase PFAM: Recombinase; Resolvase domain; KEGG: xau:Xaut_0277 resolvase domain-containing protein	
ECOLI00517	UPF0098 protein ybcL	identified by match to TIGR protein family HMM TIGR00481 hypothetical protein	UPF0098 protein aq_1250	Phospholipid-binding protein	Phosphatidylethanolamine-binding family protein	Putative uncharacterized protein	Protein ybcL	Putative uncharacterized protein	Putative uncharacterized protein VC1075	Putative outer membrane protein	Putative uncharacterized protein	Phospholipid-binding protein	Putative uncharacterized protein	Residues 1 to 183 of 183 are 96 pct identical to residues 1 to 183 of a 183 aa protein from Escherichia coli K12 ref: NP_415077.1 orf, conserved hypothetical protein	UPF0098 protein CT_736	phospholipid-binding protein, PBP family	Putative uncharacterized protein	UPF0098 protein Rv2140c/MT2198	Mb2164c, TB18.6, len: 176 aa. Equivalent to Rv2140c, len: 176 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 176 aa overlap). TB18.6, conserved hypothetical protein; shows good similarity to hypothetical proteins from Streptomyces coelicolor (177 aa; 58% identity) >emb|CAC32358.1| (AL583945) and to 17.1 kd Escherichia coli protein YbhB. FASTA best: YBHB_ECOLI P12994 hypothetical 17.1 kd protein (158 aa) opt: 465 E(): 2e-23; (46.2% identity in 156 aa overlap). CONSERVED HYPOTHETICAL PROTEIN TB18.6	putative outer membrane protein	Similar to Rickettsia conorii hypothetical protein RC1288 SWALL:Q92G37 (EMBL:AE008675) (154 aa) fasta scores: E(): 2.9e-20, 39.86% id in 148 aa, and to Sulfolobus tokodaii hypothetical protein ST0476 SWALL:Q975D2 (EMBL:AP000982) (149 aa) fasta scores: E(): 5.2e-20, 43.87% id in 155 aa conserved hypothetical protein	Putative outer membrane protein	conserved hypothetical protein	identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481 conserved hypothetical protein TIGR00481, putative	Conserved hypothetical protein	Code: R; COG: COG1881 conserved hypothetical protein	YbhB and YbcL	YbhB and YbcL	conserved hypothetical protein	
ECOLI00518	Uncharacterized HTH-type transcriptional regulator ybcM	Hypothetical transcriptional regulator ybcM	Transcriptional regulator, AraC/XylS family	Transcriptional regulator, AraC/XylS family	Putative uncharacterized protein VP1765	Residues 1 to 220 of 245 are 90 pct identical to residues 1 to 220 of a 265 aa protein from Escherichia coli K12 ref: NP_415078.1 putative ARAC-type regulatory protein	Putative AraC-family transcriptional regulatory protein	Putative uncharacterized protein	Transcriptional regulator protein	IPR000005: Helix-turn-helix, AraC type bacterial regulatory protein, AraC family	similar to Salmonella typhimurium bacterial regulatory protein, AraC family bacterial regulatory protein, AraC family	Transcriptional regulator	Putative AraC-family transcriptional regulatory protein	AraC-type DNA-binding domain-containing proteins AraC protein	AraC family bacterial regulatory protein	Best Blastp Hit: sp|P77634|YBCM_ECOLI hypothetical transcriptional regulator in EMRE-RUS intergenic region >gi|7467042|pir||H64786 ybcM protein - Escherichia coli >gi|1778460|gb|AAB40743.1| (U82598) hypothetical protein [Escherichia coli] >gi|1786758|gb|AAC73647.1| (AE000160) putative ARAC-type regulatory protein [Escherichia coli] COG2207 AraC-type DNA-binding domain-containing putative AraC-family transcriptional regulator	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Hypothetical transcriptional regulator YbcM	Transcriptional regulator, AraC family	Putative AraC-family transcriptional regulatory protein	Hypothetical transcriptional regulator YbcM	AraC-family transcriptional regulatory protein	transcriptional regulator, AraC/XylS family identified by match to protein family HMM PF00165	Putative AraC-family transcriptional regulatory protein	Transcriptional regulator, AraC/XylS family	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: son:SO0317 transcriptional regulator, AraC/XylS family	putative ARAC-type regulatory protein Code: K; COG: COG2207	AraC-family transcriptional regulatory protein	Hypothetical transcriptional regulator	
ECOLI00520	Uncharacterized protein ybcN in lambdoid DLP12 prophage region	conserved hypothetical protein	Hypothetical prophage protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	DLP12 prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical phage protein	Putative uncharacterized protein ybcN	Putative uncharacterized protein ybcN	Putative uncharacterized protein ybcN	YbcN protein	DLP12 prophage; predicted protein	DLP12 prophage; predicted protein	
ECOLI00521	Protein ninE homolog from lambdoid prophage DLP12	DLP12 prophage; conserved protein	Putative ninE protein	Conserved domain protein	Hypothetical phage protein	Putative uncharacterized protein ninE	Putative uncharacterized protein ninE	Putative uncharacterized protein ninE	NinE protein	DLP12 prophage; conserved protein	
ECOLI00522	82 prophage-derived uncharacterized protein ybcO	protein of unknown function DUF1364 PFAM: protein of unknown function DUF1364: (2.1e-18) KEGG: ecj:JW0537 hypothetical protein, ev=2e-13, 54% identity	Hypothetical prophage protein	Putative uncharacterized protein	DLP12 prophage; predicted protein	Phage protein	Hypothetical phage protein	Putative uncharacterized protein ybcO	Putative uncharacterized protein ybcO	Predicted protein	Putative uncharacterized protein ybcO	YbcO protein	Putative uncharacterized protein	Putative uncharacterized protein	DLP12 prophage; predicted protein	
ECOLI00523	Crossover junction endodeoxyribonuclease rusA	IPR008822: Endodeoxyribonuclease RusA Rus	Holliday junction resolvase; Code: L; COG: COG4570 endodeoxyribonuclease RUS	putative phage endonuclease	Crossover junction endodeoxyribonuclease rusA	Crossover junction endodeoxyribonuclease rusA	endonuclease RUS	Predicted Endodeoxyribonuclease RusA	Crossover junction endodeoxyribonuclease RusA	Endodeoxyribonuclease RusA	DLP12 prophage; endonuclease RUS	Crossover junction endodeoxyribonuclease RusA	Phage endodeoxyribonuclease	Endonuclease RUS; DLP12 prophage	pseudo	Endonuclease RUS; DLP12 prophage	Predicted crossover junction endodeoxyribonuclease	Rus	RusA protein	Endonuclease RUS	Endonuclease RUS	DLP12 prophage; endonuclease RUS	putative holliday junction resolvase Prophage ECO103_P06	bacteriophage V crossover junction endodeoxyribonuclease identified by Glimmer3; putative	
ECOLI00525	Antitermination protein Q homolog from lambdoid prophage DLP12	Putative Q antiterminator of prophage CP-933N	Residues 2 to 125 of 127 are 87 pct identical to residues 1 to 124 of a 144 aa protein REGQ_BPH19 sp: O48429 Antitermination protein Q	Putative phage antitermination protein	conserved hypothetical protein	phage antitermination protein	Antitermination protein Q	Lambdoid prophage DLP12 antitermination protein Q -like protein	Phage antitermination protein	Phage antitermination protein	antitermination protein Q-like protein similar to lambdoid prophage	Phage antitermination Q type 1 family	DLP12 prophage; predicted antitermination protein	Phage antitermination Q type 1 family	Antitermination protein Q, phage protein	Phage antitermination Protein	Putative phage antitermination protein	Putative antitermination protein Q homolog; DLP12 prophage	Putative antitermination protein Q homolog; DLP12 prophage	Putative antitermination protein Q homolog; DLP12 prophage	Predicted antitermination protein	Putative antitermination protein Q homolog; DLP12 prophage	YbcQ protein	DLP12 prophage; predicted antitermination protein	putative antitermination protein Q Prophage ECO103_P01	
ECOLI03374	Putative uncharacterized protein yhiS	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	YhiS protein	Predicted protein	pseudo conserved predicted protein, N-terminal fragment	
ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	

ECOLI00526	Lysis protein S homolog from lambdoid prophage DLP12	Lysis protein S	Lambdoid prophage DLP12 lysis protein S-like protein	predicted phage lysis protein	Lysis protein S	DLP12 prophage; predicted phage lysis protein	Putative phage lysis protein	Putative phage lysis protein S; DLP12 prophage	Putative phage lysis protein S; DLP12 prophage	Putative phage lysis protein S; DLP12 prophage	Putative phage lysis protein S; DLP12 prophage	EssD protein	DLP12 prophage; predicted phage lysis protein	putative holin protein Prophage ECO103_P01	
ECOLI00527	Probable lysozyme from lambdoid prophage DLP12	Probable lysozyme from lambdoid prophage DLP12	Lysozyme	Lysozyme	Lysozyme	Lysozyme	Lysis protein; muramidase; endolysin; Similar to: LYCV_BPP1 predicted phage-related lysozyme	Phage lysozyme	glycoside hydrolase, family 24	putative phage-related protein Similar to codons 65 to the C-terminus of Xanthomonas oryzae bacteriophage Xp10 28R.  UniProt:Q7Y5I9_9CAUD (EMBL:AY299121) (223 aa) similarity:fasta; with=UniProt:Q7Y5I9_9CAUD (EMBL:AY299121); Xanthomonas oryzae bacteriophage Xp10.; 28R.; length=223; id 41.497; 147 aa overlap; query 8-153; subject 65-211	glycoside hydrolase, family 24 PFAM: glycoside hydrolase, family 24: (3.9e-18) KEGG: xfa:XF0513 phage-related endolysin, ev=2e-27, 46% identity	gp24 identified by match to protein family HMM PF00959	putative lysozyme protein similar to Z0960 [Escherichia coli] and 28R [Xanthomonas oryzae bacteriophage Xp10] Similar to entrez-protein:O80292 Putative location:bacterial periplasmic space Psort-Score: 0.8306; go_function: hydrolase activity, acting on glycosyl bonds [goid 0016798]; go_function: hydrolase activity [goid 0016787]; go_function: catalytic activity [goid 0003824]; go_function: lysozyme activity [goid 0003796]; go_process: carbohydrate metabolism [goid 0005975]; go_process: peptidoglycan catabolism [goid 0009253]; go_process: cell wall catabolism [goid 0016998]; go_process: cytolysis [goid 0019835]	Lysozyme	Glycoside hydrolase, family 24 precursor	Glycoside hydrolase, family 24 precursor	Lysozyme	Lysozyme	prophage LambdaMc01, lysozyme	gp24 identified by match to protein family HMM PF00959	bacteriophage lambda lysozyme Code: R; COG: COG3772	Putative endolysin	Glycoside hydrolase, family 24 precursor	Glycoside hydrolase family 24 precursor	Phage lysozyme	Lysozyme	DLP12 prophage; predicted lysozyme	jgi|Lacbi1|307590|eu2.Lbscf0036g00380	Lysozyme	
ECOLI00528	Putative Rz endopeptidase from lambdoid prophage DLP12	Putative endopeptidase of prophage CP-933X	Endopeptidase	Bacteriophage lysis protein precursor	DLP12 prophage; predicted murein endopeptidase	Putative phage endopeptidase	Putative murein endopeptidase; DLP12 prophage	Putative murein endopeptidase; DLP12 prophage	Putative murein endopeptidase; DLP12 prophage	RzpD protein	Putative endopeptidase of prophage CP-933X	DLP12 prophage; predicted murein endopeptidase	putative endopeptidase Prophage ECO103_P01	Lysis protein	
ECOLI00530	Lipoprotein bor homolog from lambdoid prophage DLP12	Lipoprotein	Bor protein	Lambdoid prophage DLP12 Bor-like protein	Bor lipoprotein	lambda prophage Bor protein	Bor family protein precursor	Putative uncharacterized protein	DLP12 prophage; predicted lipoprotein	Iss	Lipoprotein	Putative Bor protein of bacteriophage	Putative lipoprotein; DLP12 prophage	predicted lipoprotein Bor Prophage ECO103_P01	Bor family protein	
ECOLI00531	Uncharacterized protein ybcV	DLP12 prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein ybcV	Putative envelope protein of prophage CP-933X	DLP12 prophage; predicted protein	hypothetical protein Prophage ECO103_P01	Putative uncharacterized protein	
ECOLI00532	Uncharacterized protein ybcW	DLP12 prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein ybcW	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	DLP12 prophage; predicted protein	hypothetical protein Prophage ECO103_P01	Putative uncharacterized protein	
ECOLI00534	Prophage QSR' DNA packaging protein NU1 homolog	

ECOLI00536	Putative uncharacterized protein ybcY	Putative uncharacterized protein STY1433	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative O-methyl transferase	Residues 1 to 222 of 222 are 100 pct identical to residues 1 to 222 of a 222 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287402.1 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR000051: SAM (and some other nucleotide) binding motif; IPR001601: Generic methyltransferase putative SAM-dependent methyltransferases	Putative uncharacterized protein	Putative SAM-dependent methyltransferase	Code: QR; COG: COG0500 unknown protein encoded within prophage	Code: QR; COG: COG0500 unknown protein encoded within prophage	Code: QR; COG: COG0500; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein	Methyltransferase type 12 PFAM: Methyltransferase type 12 KEGG: hch:HCH_01556 SAM-dependent methyltransferase	unknown protein encoded within prophage Code: QR; COG: COG0500	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	SAM-dependent methyltransferase	Methyltransferase type 12	Putative uncharacterized protein	Methyltransferase type 12	Methyltransferase type 12	
ECOLI00537	Putative uncharacterized protein ylcE	Putative uncharacterized protein	hypothetical bacteriophage protein	hypothetical bacteriophage protein	Putative uncharacterized protein ylcE	hypothetical bacteriophage protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative tail fiber assembly protein	pseudo	Putative tail fiber assembly protein	Putative tail fiber assembly protein	
ECOLI00538	HTH-type transcriptional regulator appY	DNA-binding transcriptional activator; DLP12 prophage	Putative AraC-type regulatory protein	DLP12 prophage; DNA-binding transcriptional activator	
ECOLI00539	Protease 7	Protease 7	Protease VII	Outer membrane protein 3b (A), protease VII	outer membrane serine protease KEGG: mlo:mlr6132 outer membrane serine protease	outer membrane protein 3b (a), protease VII	DLP12 prophage; outer membrane protease VII	Protease 7	Putative phage protease	Outer membrane protease VII (Outer membrane protein 3b); DLP12 prophage	Outer membrane protease VII (Outer membrane protein 3b); DLP12 prophage	pseudo	Putative outer membrane protease OmpT	Outer membrane protease VII	DLP12 prophage; outer membrane protease VII	putative outer membrane protease OmpT precursor Prophage ECO103_P01	
ECOLI00540	Porin thermoregulatory protein envY	Residues 1 to 253 of 253 are 98 pct identical to residues 1 to 253 of a 253 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286285.1 envelope protein; thermoregulation of porin biosynthesis	thermoregulation of porin biosynthesis; Code: K; COG: COG2207 envelope protein	envelope protein thermoregulation of porin biosynthesis; Code: K; COG: COG2207	Transcriptional regulator, AraC family	DNA-binding transcriptional activator of porin biosynthesis	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	AraC family regulatory protein	Putative phage envelope protein	DNA-binding transcriptional activator of porin biosynthesis	DNA-binding transcriptional activator of porin biosynthesis	DNA-binding transcriptional activator of porin biosynthesis	DNA-binding transcriptional activator of porin biosynthesis	DNA-binding transcriptional activator of porin biosynthesis	DNA-binding transcriptional activator of porin biosynthesis	DNA-binding transcriptional activator EnvY of porin biosynthesis	
ECOLI00541	Uncharacterized protein ybcH	Putative uncharacterized protein ybcH	Residues 1 to 296 of 296 are 97 pct identical to residues 1 to 296 of a 296 aa protein from Escherichia coli K12 ref: NP_415099.1 orf, conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ybcH	conserved hypothetical protein; putative signal peptide Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein	conserved hypothetical protein YbcH precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein	conserved hypothetical protein KEGG: pen:PSEEN2966 hypothetical protein	Putative uncharacterized protein precursor	Predicted protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ybcH	Putative uncharacterized protein ybcH	Putative uncharacterized protein ybcH	Putative uncharacterized protein ybcH	Putative uncharacterized protein ybcH	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein ybcH	Predicted protein	
ECOLI00542	Bacteriophage N4 adsorption protein A	Bacteriophage N4 receptor, outer membrane protein	similar to Escherichia coli K12 bacteriophage N4 receptor, outer membrane protein gi: 1786780 (991 aa).  BLAST with identity of 97% in 989 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Code: R; COG: COG0457 bacteriophage N4 receptor, outer membrane protein	Bacteriophage N4 adsorption protein A	Bacteriophage N4 adsorption protein A	conserved hypothetical protein; putative signal peptide Evidence 4 : Homologs of previously reported genes of unknown function	bacteriophage N4 adsorption protein A precursor	Putative uncharacterized protein precursor	Bacteriophage N4 adsorption protein A	conserved hypothetical protein KEGG: pen:PSEEN2965 hypothetical protein	Putative uncharacterized protein precursor	Bacteriophage N4 receptor, outer membrane subunit	TPR repeat-containing protein precursor	Bacteriophage N4 adsorption protein A	Bacteriophage N4 adsorption protein A	Phage N4 adsorption protein A	Bacteriophage N4 receptor, outer membrane subunit	Bacteriophage N4 receptor, outer membrane subunit	Bacteriophage N4 receptor, outer membrane subunit	Bacteriophage N4 receptor, outer membrane subunit	Bacteriophage N4 receptor, outer membrane subunit	Putative uncharacterized protein	Bacteriophage N4 receptor, outer membrane subunit NfrA	Bacteriophage N4 receptor, outer membrane subunit	Bacteriophage N4 receptor, outer membrane subunit	Bacteriophage N4 receptor, outer membrane subunit	bacteriophage N4 receptor outer membrane subunit NfrA	
ECOLI00543	Bacteriophage N4 adsorption protein B	Bacteriophage N4 adsorption protein B	Bacteriophage N4 adsorption protein B	Residues 1 to 745 of 745 are 99 pct identical to residues 1 to 745 of a 745 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286288.1 bacteriophage N4 receptor, outer membrane protein	Probable inner membrane transmembrane protein	Bacteriophage receptor protein, putative	bacteriophage N4 adsorption protein B	bacteriophage N4 adsorption protein B	putative glycosyltransferases	outer membrane protein bacteriophage N4 receptor	NfrB KEGG: ecs:ECs0601 NfrB, ev=4e-58, 31% identity	Bacteriophage N4 adsorption protein B	bacteriophage N4 adsorption protein B	Bacteriophage N4 receptor, outer membrane protein	putative bacteriophage receptor protein NfrB Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ph : phenotype	bacteriophage N4 receptor, outer membrane protein	bacteriophage N4 receptor, outer membrane protein	Bacteriophage N4 adsorption protein B	bacteriophage N4 adsorption protein B	General secretory system II, protein E domain protein precursor	Bacteriophage N4 adsorption protein B	General secretory system II protein E domain protein PFAM: General secretory system II protein E domain protein KEGG: pen:PSEEN2964 bacteriophage receptor protein NfrB	General secretory system II protein E domain protein precursor	Putative transmembrane bacteriophage N4 adsorption protein B precursor	Bacteriophage N4 receptor, inner membrane subunit	General secretory system II protein E domain protein precursor	Bacteriophage N4 adsorption protein B	General secretory system II protein E domain protein	Bacteriophage N4 adsorption protein B	
ECOLI00544	Sensor kinase cusS	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	hypothetical two component sensor protein	Sensor kinase cusS	Sensor protein	Sensor kinase cusS	similar to AE006988-14|AAK45313.1| percent identity: 29 in 466 aa putative sensor kinase	Sensor protein	Sensor protein	Sensor protein	Residues 1 to 484 of 484 are 97 pct identical to residues 1 to 484 of a 484 aa protein from Escherichia coli dbj: BAA35204.1 Sensor protein copS	Sensor protein	Sensor protein	Sensor protein	identified by match to PFAM protein family HMM PF00512 sensor histidine kinase	Sensor protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator kinase sensor component of a two component signal transduction system	sensor protein IrlS	Similar to Escherichia coli sensor kinase CusS or b0570 SWALL:CUSS_ECOLI (SWALL:P77485) (480 aa) fasta scores: E(): 2.5e-19, 28.09% id in 331 aa, and to Bacteroides thetaiotaomicron two-component system sensor histidine kinase BT0989 SWALL:AAO76096 (EMBL:AE016930) (455 aa) fasta scores: E(): 5e-119, 69.67% id in 455 aa, and to Fusobacterium nucleatum two-component sensor kinase CzcS FN0586 SWALL:Q8R693 (EMBL:AE010570) (445 aa) fasta scores: E(): 8.5e-23, 28.86% id in 291 aa putative two-component regulator sensor kinase	Sensor protein	two-component system sensor protein	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM TIGR01386 heavy metal sensor histidine kinase	ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal	
ECOLI00545	Transcriptional regulatory protein cusR	Putative two component response regulator transcription regulator protein	Transcriptional regulatory protein cusR	Putative two component response regulator transcription regulator protein	Transcriptional regulatory protein cusR	Residues 1 to 227 of 227 are 99 pct identical to residues 1 to 227 of a 227 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286296.1 putative 2-component transcriptional regulator	Probable two component response regulator transcription regulator protein	Two component response regulator	identified by similarity to SP:Q02540; match to protein family HMM PF00072; match to protein family HMM PF00486; match to protein family HMM TIGR01387 DNA-binding heavy metal response regulator	Heavy metal response regulator	Heavy metal response regulator	Code: TK; COG: COG0745 putative 2-component transcriptional regulator	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11004187, 8449873; Product type r : regulator transcriptional activator of copper resistance (two-component regulatory system with CusS)	heavy metal sensing two-component sytem,response regulator start codon not provided	Two component Heavy metal response Transcriptional regulator, Winged helix family	Two component Heavy metal response Transcriptional regulator, Winged helix family	Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain COG0745	Probable two component response regulator transcription regulator protein	response regulator receiver domain protein (CheY-like)	Putative 2-component transcriptional regulator	two component transcriptional regulator, winged helix family PFAM: response regulator receiver; transcriptional regulator domain protein KEGG: bxe:Bxe_B1389 two component heavy metal response transcriptional regulator, winged helix family	two component heavy metal response transcriptional regulator, winged helix family	two component response regulator Transcriptional activator protein, High confidence in function and specificity	two component heavy metal response transcriptional regulator, winged helix family protein TIGRFAM: heavy metal response regulator PFAM: response regulator receiver; transcriptional regulator domain protein KEGG: sde:Sde_1948 response regulator receiver domain protein (CheY-like)	two component heavy metal response transcriptional regulator, winged helix family TIGRFAM: heavy metal response regulator PFAM: response regulator receiver; transcriptional regulator domain protein KEGG: pha:PSHAb0012 transcriptional activator of copper resistance (two-component regulatory system with CusS)	putative two-component response regulator	DNA-binding heavy metal response regulator Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator	Heavy metal response regulator	putative 2-component transcriptional regulator Code: TK; COG: COG0745	
ECOLI00546	Cation efflux system protein cusC	Outer membrane efflux protein	Cation efflux system protein cusC precursor	Probable outer membrane lipoprotein	RND efflux system, outer membrane lipoprotein, NodT family	Cation efflux system protein cusC	Residues 1 to 460 of 460 are 98 pct identical to residues 1 to 460 of a 460 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286297.1 putative resistance protein	Probable outer membrane chanel lipoprotein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter major intrinsic multiple antibiotic resistance efflux outer membrane protein precursor	outer membrane protein TolC	outer membrane protein	identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845 outer membrane protein	Best Blastp Hit: gb|AAF42061.1| (AE002521) multidrug efflux pump channel protein [Neisseria meningitidis MC58]; MtrE multidrug efflux pump channel protein	Code: MU; COG: COG1538 putative resistance protein	Evidence 2b : Function of strongly homologous gene; PubMedId : 14641571; Product type t : transporter putative outer membrane protein oprM precursor of a metabolite export system	RND efflux system, outer membrane lipoprotein, NodT	RND efflux system, outer membrane lipoprotein, NodT	outer membrane efflux protein identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845	Probable outer membrane efflux protein	Outer membrane efflux protein	Probable outer membrane lipoprotein CusC	type I secretion outer membrane protein	RND efflux system, outer membrane lipoprotein, NodT	RND efflux system, outer membrane lipoprotein, NodT family TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family PFAM: outer membrane efflux protein KEGG: psp:PSPPH_4015 outer membrane efflux lipoprotein, NodT family	RND efflux system, outer membrane lipoprotein, NodT family TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family PFAM: outer membrane efflux protein KEGG: bcn:Bcen_4472 RND efflux system, outer membrane lipoprotein, NodT	RND efflux system, outer membrane lipoprotein, NodT family precursor	outer membrane efflux protein	probable outer membrane lipoprotein CusC precursor	RND efflux system, outer membrane lipoprotein, NodT family	
ECOLI00546	Cation efflux system protein cusC	Outer membrane efflux protein	Cation efflux system protein cusC precursor	Probable outer membrane lipoprotein	RND efflux system, outer membrane lipoprotein, NodT family	Cation efflux system protein cusC	Residues 1 to 460 of 460 are 98 pct identical to residues 1 to 460 of a 460 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286297.1 putative resistance protein	Probable outer membrane chanel lipoprotein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter major intrinsic multiple antibiotic resistance efflux outer membrane protein precursor	outer membrane protein TolC	outer membrane protein	identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845 outer membrane protein	Best Blastp Hit: gb|AAF42061.1| (AE002521) multidrug efflux pump channel protein [Neisseria meningitidis MC58]; MtrE multidrug efflux pump channel protein	Code: MU; COG: COG1538 putative resistance protein	Evidence 2b : Function of strongly homologous gene; PubMedId : 14641571; Product type t : transporter putative outer membrane protein oprM precursor of a metabolite export system	RND efflux system, outer membrane lipoprotein, NodT	RND efflux system, outer membrane lipoprotein, NodT	outer membrane efflux protein identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845	Probable outer membrane efflux protein	Outer membrane efflux protein	Probable outer membrane lipoprotein CusC	type I secretion outer membrane protein	RND efflux system, outer membrane lipoprotein, NodT	RND efflux system, outer membrane lipoprotein, NodT family TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family PFAM: outer membrane efflux protein KEGG: psp:PSPPH_4015 outer membrane efflux lipoprotein, NodT family	RND efflux system, outer membrane lipoprotein, NodT family TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family PFAM: outer membrane efflux protein KEGG: bcn:Bcen_4472 RND efflux system, outer membrane lipoprotein, NodT	RND efflux system, outer membrane lipoprotein, NodT family precursor	outer membrane efflux protein	probable outer membrane lipoprotein CusC precursor	RND efflux system, outer membrane lipoprotein, NodT family	
ECOLI00547	Cation efflux system protein cusF	Putative exported protein	Cation efflux system protein cusF	Residues 1 to 110 of 110 are 99 pct identical to residues 1 to 110 of a 110 aa protein from Escherichia coli K12 ref: NP_415105.1 orf, conserved hypothetical protein	Code: S; COG: COG5569 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ylcC	conserved hypothetical protein Code: S; COG: COG5569	conserved hypothetical protein	conserved hypothetical protein KEGG: pol:Bpro_3489 hypothetical protein	Putative uncharacterized protein precursor	Putative periplasmic copper-binding protein	Cation efflux system protein CusF	Heavy metal efflux system protein, putative	Probable Cation efflux system protein cusF	Periplasmic copper-binding protein	Cation efflux system protein CusF	Putative uncharacterized protein precursor	Cation efflux system protein CusF	Putative uncharacterized protein	Cation efflux system protein CusF	Cation efflux system protein CusF	Putative cation efflux system protein CusC	Periplasmic copper-binding protein	Periplasmic copper-binding protein	Periplasmic copper-binding protein	Putative uncharacterized protein	Periplasmic copper-binding protein	Periplasmic copper-binding protein	
ECOLI00548	Cation efflux system protein cusB	Putative cation efflux system transmembrane protein	Putative exported protein	Cation efflux system protein cusB precursor	Putative copper efflux system protein	Cation efflux system protein	Efflux transporter, RND family, MFP subunit	Putative cation efflux system transmembrane protein	Cation efflux system protein cusB	Uncharacterized conserved protein	Possible cation transporter transmembrane protein	Putative cation efflux system transmembrane protein	Putative uncharacterized protein	copper/silver resistance periplasmic protein	Heavy metal RND efflux membrane fusion protein, CzcB family	cation efflux system transmembrane protein	Copper efflux pump membrane fusion protein	Code: M; COG: COG0845 putative resistance protein	Code: M; COG: COG0845 putative resistance protein	Secretion protein HlyD	Secretion protein HlyD	Secretion protein HlyD	Cation efflux system protein	Secretion protein HlyD	Secretion protein HlyD precursor	efflux transporter, RND family, MFP subunit identified by match to protein family HMM TIGR01730	Putative copper efflux system protein CusB	Heavy metal RND efflux membrane fusion protein,CzcB family	cation efflux system protein	
ECOLI00549	Cation efflux system protein cusA	Cation efflux system	Putative silver efflux pump	Putative cation efflux system transmembrane protein	Putative cation efflux system protein	putative cation efflux system transmembrane protein	Cation efflux system protein cusA	Cation efflux system protein	Cation efflux system protein	Heavy metal efflux pump, CzcA family	Putative cation efflux system transmembrane protein	Cation efflux system protein cusA	Putative silver efflux pump	Residues 1 to 1046 of 1047 are 99 pct identical to residues 1 to 1046 of a 1047 aa protein from Escherichia coli K12 ref: NP_415107.1 putative inner membrane component for iron transport	Probable cation efflux system transmembrane protein	conserved gene chemiosmotic efflux system B protein A	CATION EFFLUX SYSTEM PROTEIN	copper/silver resistance inner membrane protein	Similar to Legionella pneumophila chemiosmotic efflux system B protein A CebA SWALL:Q8RNP2 (EMBL:AF480912) (1047 aa) fasta scores: E(): 1.9e-46, 35.28% id in 1244 aa, and to Escherichia coli cation efflux system protein CusA or B0575 SWALL:CUSA_ECOLI (SWALL:P38054) (1047 aa) fasta scores: E(): 3.4e-40, 32.77% id in 1251 aa putative copper/silver resistance-related transport membrane protein	Heavy metal RND efflux transporter, CzcA family	Co/Zn/Cd efflux system membrane component	identified by similarity to SP:P38054; match to protein family HMM PF00873; match to protein family HMM TIGR00914 cation efflux system protein CusA	Heavy metal efflux pump CzcA	Code: P; COG: COG3696 putative inner membrane component for iron transport	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12813074, 11222619; Product type t : transporter cation efflux system protein cusA	Code: P; COG: COG3696 putative inner membrane component for iron transport	Heavy metal efflux pump CzcA	heavy metal efflux pump CzcA	Heavy metal efflux pump CzcA	
ECOLI00550	Phenylalanine-specific permease	Phenylalanine-specific permease	Phenylalanine-specific permease	Phenylalanine-specific transport system	Phenylalanine-specific permease	Residues 1 to 470 of 470 are 99 pct identical to residues 1 to 470 of a 470 aa protein from Escherichia coli gb: AAB40774.1 phenylalanine-specific permease	IPR002293: Amino acid/polyamine transporter, family I; IPR004840: Amino acid permease APC family, phenylalanene transporter	similar to Salmonella typhi CT18 phenylalanine-specific permease phenylalanine-specific permease	Phenylalanine-specific permease	APC family, phenylalanene transporter	Code: E; COG: COG1113 phenylalanine-specific transport system	Code: E; COG: COG1113 phenylalanine-specific transport system	Code: E; COG: COG1113 phenylalanine-specific transport system	Phenylalanine-specific permease	hypothetical protein similarity to COG1113 Gamma-aminobutyrate permease and related permeases(Evalue: 1E-149)	Phenylalanine-specific permease	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: aba:Acid345_1536 amino acid transporter	Aromatic amino acid transport protein AroP	Aromatic amino acid transport protein	phenylalanine-specific transport system Code: E; COG: COG1113	phenylalanine-specific permease	Amino acid permease-associated region	Putative phenylalanine-specific permease	Putative uncharacterized protein	Phenylalanine-specific permease	Amino acid permease-associated region	Phenylalanine transporter	Aromatic amino acid transport protein AroP	Phenylalanine-specific permease	
ECOLI00551	Uncharacterized protein ybdG	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Conserved hypothetical membrane protein	Putative membrane transport protein	Hypothetical protein ybdG	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Mechanosensitive ion channel family protein	Putative transport	Putative transport	Mechanosensitive ion channel	hypothetical protein	Residues 7 to 421 of 421 are 100 pct identical to residues 1 to 415 of a 415 aa protein from Escherichia coli K12 ref: NP_415109.1 putative transport	Putative membrane protein	putative mechanosensitive ion channel protein, conserved hypothetical	putative transport	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	similar to BR1042, identified by similarity to G:AAl52125.1; GB:AAF83247.1;PIR:A83211; conserved hypothetical membrane protein conserved hypothetical membrane protein	Putative uncharacterized protein	Putative mechanosensitive ion channel	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transporter with mechanosensitive ion channel.	Similar to Bacteroides thetaiotaomicron putative membrane transport protein BT4053 SWALL:Q8A0G8 (EMBL:AE016943) (443 aa) fasta scores: E(): 3.4e-125, 76.21% id in 412 aa, and to Shewanella oneidensis conserved hypothetical protein so0121 SWALL:Q8EKH2 (EMBL:AE015463) (392 aa) fasta scores: E(): 1.4e-66, 46.13% id in 388 aa, and to Vibrio cholerae hypothetical protein Vc0265 SWALL:Q9KV91 (EMBL:AE004115) (412 aa) fasta scores: E(): 2.7e-66, 45.69% id in 383 aa. putative transmembrane transport protein	Putative uncharacterized protein	Similar to Q8A7A2 Putative membrane protein from Bacteroides thetaiotaomicron (391 aa). FASTA: opt: 908 Z-score: 1062.3 E(): 2.6e-51 Smith-Waterman score: 908; 37.637 identity in 364 aa overlap. ORF ftt0992 conserved hypothetical membrane protein	Small-conductance mechanosensitive channel	Putative transport	
ECOLI00552	Oxygen-insensitive NAD(P)H nitroreductase	Putative NAD(P)H nitroreductase	Putative uncharacterized protein	Nitroreductase	Oxygen-insensitive NAD(P)H nitroreductase	Probable oxygen-insensitive NAD(P)H nitroreductase	Nitroreductase family; possible NAD(P)H-flavin oxidoreductase	Oxygen-insensitive NAD(P)H nitroreductase	Oxygen-insensitive NAD(P)H nitroreductase	Oxygen-insensitive NAD(P)H nitroreductase	Putative uncharacterized protein	Oxygen-insensitive NAD(P)H nitroreductase	Oxygen-insensitive NAD(P)H nitroreductase	Nitroreductase	Putative NAD(P)H nitroreductase SAV2523	Oxygen-insensitive NAD(P)H nitroreductase	Biological Process: electron transport (GO:0006118), Molecular Function: oxidoreductase activity (GO:0016491) NADH-dependent nitro/flavin oxidoreductase	dihydropteridine reductase/oxygen-insensitive NAD(P)H nitroreductase	similar to Salmonella typhi CT18 oxygen-insensitive NAD(P)H nitroreductase oxygen-insensitive NAD(P)H nitroreductase	hypothetical protein, similar to NAD(P)H-flavin oxidoreductase	Putative NAD(P)H-flavin oxidoreductase	Ortholog of S. aureus MRSA252 (BX571856) SAR2603 nitroreductase family protein	hypothetical protein, similar to NAD(P)H-flavin oxidoreductase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme oxygen-insensitive NADPH nitroreductase	NAD(P)H-dependent flavin reductase	Similar to: HI1278, YC78_HAEIN putative NAD(P)H nitroreductase	Nitroreductase NfnB protein	Oxygen-insensitive NAD(P)H nitroreductase	Similar to Q87FT7 Oxygen-insensitive NAD(P)H nitroreductase from Vibrio parahaemolyticus (217 aa).  FASTA: opt: 753 Z-score: 968.9 E(): 4.5e-46 Smith-Waterman score: 753; 51.152 identity in 217 aa overlap Oxygen-insensitive NAD(P)H nitroreductase	
ECOLI00553	Uncharacterized protein ybdF	Uncharacterized protein conserved in bacteria	Putative uncharacterized protein	Putative uncharacterized protein STY0621	Lmo1430 protein	Uncharacterized BCR	hypothetical protein	Hypothetical protein ybdF	identified by match to protein family HMM PF04237 conserved hypothetical protein	Putative uncharacterized protein	Uncharacterized protein ybdF	SCC77.02, unknown, len: 124 aa. Similar to several proteins of unknown function including: Streptomyces lavendulae TR:Q9X5T5(EMBL:AF127374) MmcQ, located within the antibiotic mitomycin C biosynthetic gene cluster (123 aa), fasta scores opt: 377 z-score: 487.1 E(): 9.6e-20 52.0% identity in 127 aa overlap and Deinococcus radiodurans TR:AAF11947(EMBL:AE002071) conserved hypothetical protein (132 aa), fasta scores opt: 299 z-score: 389.0 E(): 2.8e-14 43.0% identity in 128 aa overlap. conserved hypothetical protein SCC77.02.	Uncharacterized protein conserved in bacteria	Lin1469 protein	Residues 1 to 122 of 122 are 99 pct identical to residues 1 to 122 of a 122 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286304.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	identified by similarity to GP:16501831; match to protein family HMM PF04237 conserved hypothetical protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	hypothetical protein	Putative cytoplasmic protein	identified by similarity to OMNI:NTL01SF0469; match to protein family HMM PF04237 conserved hypothetical protein	Code: S; COG: COG2315 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function; PubMedId : 10099135 conserved protein of unknown function; putative MmcQ-like protein	Code: S; COG: COG2315 conserved hypothetical protein	uncharacterized protein conserved in bacteria COG2315	Code: S; COG: COG2315; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	
ECOLI00554	Uncharacterized protein ybdJ	Hypothetical protein ybdJ	Putative uncharacterized protein ybdJ	Residues 1 to 82 of 82 are 97 pct identical to residues 1 to 82 of a 82 aa protein from Escherichia coli K12 ref: NP_415112.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YbdJ	Putative uncharacterized protein ybdJ	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative inner membrane protein	Putative uncharacterized protein	Putative lipoprotein	Predicted inner membrane protein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein ybdJ	Putative inner membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative uncharacterized protein ybdJ	
ECOLI00555	Carboxylate-amine ligase ybdK	Carboxylate-amine ligase ybdK	Carboxylate-amine ligase BPSL0001	Carboxylate-amine ligase ybdK	Carboxylate-amine ligase BP0598	Carboxylate-amine ligase BB0289	Carboxylate-amine ligase BPP0286	Carboxylate-amine ligase BMA2917	Carboxylate-amine ligase DIP2042	Carboxylate-amine ligase ybdK	Residues 1 to 372 of 372 are 99 pct identical to residues 1 to 372 of a 372 aa protein from Escherichia coli K12 ref: NP_415113.1 orf, conserved hypothetical protein	Carboxylate-amine ligase RSc3298	conserved gene hypothetical protein	Carboxylate-amine ligase CV_2904	IPR006336: Glutamate--cysteine ligase, plant putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Carboxylate-amine ligase PP_3253	Carboxylate-amine ligase ybdK	identified by match to protein family HMM PF04107; match to protein family HMM TIGR02050 Glutamate-cysteine ligase family 2(GCS2) family	Enzymatic protein of unknown function	Enzymatic protein of unknown function	conserved hypothetical protein	Code: S; COG: COG2170 conserved hypothetical protein	Code: S; COG: COG2170 conserved hypothetical protein	glutamate-cysteine ligase family protein	Enzymatic protein of unknown function	Enzymatic protein of unknown function	Code: S; COG: COG2170; orf conserved hypothetical protein	Carboxylate-amine ligase Bcen_0001	

ECOLI00556	Protein hokE	Putative uncharacterized protein	Hypothetical protein	Small toxic membrane polypeptide	Toxic polypeptide, small	Hok/gef cell toxic protein precursor	Hok/Gef family protein	Hok/Gef family protein	Hok/Gef family protein	Putative uncharacterized protein	Toxic polypeptide, small	Toxic polypeptide, small	Toxic polypeptide, small	Toxic polypeptide, small	Toxic polypeptide, small	HokE protein	Toxic polypeptide, small	Toxic polypeptide, small	Hok/gef cell toxic protein	
ECOLI02324	Putative transposase insL for insertion sequence element IS186A/B/C	IS186 ORF1	IS186, transposase	IS186/IS421 transposase	IS186, transposase	Transposase IS4 family protein	pseudo	InsL-3 protein	IS186/IS421 transposase	Putative transposase insL for insertion sequence IS186	
ECOLI00557	4'-phosphopantetheinyl transferase entD	4'-phosphopantetheinyl transferase entD	hypothetical phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase entD	Enterobactin synthetase component D	Siderophore biosynthesis protein, putative	4'-phosphopantetheinyl transferase entD	Phosphopantetheinyl transferase component of siderophore synthetase	Residues 1 to 256 of 256 are 97 pct identical to residues 1 to 256 of a 256 aa protein from Escherichia coli gb: AAB40782.1 enterobactin synthetase component D	Putative phosphopantetheinyl transferase	IPR003542: Enterobactin synthetase, component D enterochelin synthetase, component D (phoshpantetheinyltransferase)	similar to Salmonella typhi CT18 enterobactin synthetase component D enterobactin synthetase component D	Putative phosphopantetheinyl transferase	Siderophore biosynthesis protein, putative	4'-phosphopantetheinyl transferase entD	identified by similarity to GB:AAO55195.1; match to protein family HMM PF01648 siderophore biosynthesis protein, putative	Code: Q; COG: COG2977 enterochelin synthetase, component D	Code: Q; COG: COG2977 enterochelin synthetase, component D	Code: Q; COG: COG2977 enterochelin synthetase, component D	Enterobactin synthetase component D	Putative phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase EntD	Phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase component of siderophore synthetase	putative phosphopantetheinyl transferase component of siderophore synthetase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	enterochelin synthetase, component D Code: Q; COG: COG2977	Phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase EntD	4'-phosphopantetheinyl transferase	
ECOLI00558	Ferrienterobactin receptor	Ferric enterobactin receptor	Ferric enterobactin receptor	Ferrienterobactin receptor	Ferrienterobactin receptor	TonB dependent siderophore receptor	Outer membrane receptor for ferric enterobactin (Enterochelin) and colicins B and D	TonB dependent iron siderophore receptor	Residues 1 to 746 of 746 are 99 pct identical to residues 1 to 746 of a 746 aa protein from Escherichia coli K12 ref: NP_415116.1 outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D	IPR000531: TonB-dependent receptor protein outer membrane porin, receptor for ferric enterobactin (enterochelin) and colicins B and D	similar to Salmonella typhi CT18 ferrienterobactin receptor precursor ferrienterobactin receptor precursor	Siderophore receptor protein	Outer membrane porin, receptor for ferric enterobactin (Enterochelin) and colicins B and D	ferric enterobactin receptor	identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783 outer membrane ferric enterobactin receptor	Code: P; COG: COG4771 outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D	outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D; Code: P; COG: COG4771 FepA	TonB-dependent receptor	Code: P; COG: COG4771 outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D	Ferrienterobactin receptor	Ferrienterobactin receptor	TonB-dependent receptor PFAM: TonB-dependent receptor; TonB-dependent receptor, plug KEGG: cte:CT0935 TonB-dependent receptor-related protein	Putative siderophore	ferric enterobactin receptor	outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D Code: P; COG: COG4771	ferrienterobactin receptor precursor	TonB-dependent receptor, plug precursor	TonB-dependent receptor, plug precursor	TonB-dependent siderophore receptor precursor	
ECOLI00559	Enterochelin esterase	Probable esterase	Enterochelin esterase	Enterochelin esterase	SCF34.09, possible esterase, len: 363 aa; similar to enterochelin esterases e.g. SW:FES_ECOLI (EMBL:J04216), Fes, Escherichia coli enterochelin esterase (374 aa), fasta scores; opt: 422 z-score: 474.2 E(): 4.7e-19, 32.5% identity in 332 aa overlap putative esterase	Residues 1 to 400 of 400 are 98 pct identical to residues 1 to 400 of a 400 aa protein from Escherichia coli gb: AAB40784.1 enterochelin esterase	Similarities with enterochelin esterase Fes	Enterochelin esterase	IPR000379: Esterase/lipase/thioesterase enterochelin esterase	similar to Salmonella typhi CT18 enterochelin esterase enterochelin esterase	Enterochelin esterase	Code: P; COG: COG2382 enterochelin esterase	Code: P; COG: COG2382 enterochelin esterase	Enterochelin esterase and related enzyme COG2382	Code: P; COG: COG2382 enterochelin esterase	Ferric enterobactin esterase	Putative esterase	Enterochelin esterase	putative esterase identified by match to protein family HMM PF00756	Enterochelin esterase	putative esterase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	enterochelin esterase Code: P; COG: COG2382	enterochelin esterase	Enterochelin esterase	probable esterase	Putative esterase	Enterochelin esterase	Putative uncharacterized protein	Enterochelin esterase	
ECOLI00560	Uncharacterized protein ybdZ	Putative uncharacterized protein ybdZ	Putative MbtH-like protein	Hypothetical protein	MbtH-like protein	Putative uncharacterized protein	CDS_ID OB0959 hypothetical protein	Putative uncharacterized protein	Probable MbtH-like protein	Protein mbtH	Mb2398c, mbtH, len: 71 aa. Equivalent to Rv2377c, len: 71 aa, from Mycobacterium tuberculosis strain H37Rv, (98.6% identity in 71 aa overlap). Putative mbtH, conserved protein with no function assigned (see first and second citation), similar to hypothetical proteins or proteins found in several gene clusters for biosynthesis or transport of siderophores and other nonribosomally synthesized peptides e.g. Q9Z388|SCE8.11c PUTATIVE SMALL CONSERVED HYPOTHETICAL PROTEIN from Streptomyces coelicolor (71 aa), FASTA scores: opt: 345, E(): 1.4e-19, (68.2% identity in 66 aa overlap); Q9F8V3|CUMB COUY PROTEIN (probably involved in the biosynthesis of aminocoumarin antibiotic coumermycin A(1)) (see third citation below) from Streptomyces rishiriensis (71 aa), FASTA scores: opt: 329, E(): 2.2e-18, (63.2% identity in 68 aa overlap); Q9F5J2|SIM-CB MBTH-LIKE PROTEIN (probably protein involved in the biosynthesis of aminocoumarin antibiotic coumermycin A(1)) from Streptomyces antibioticus (70 aa), FASTA scores: opt: 308, E(): 8.4e-17, (65.6% identity in 64 aa overlap); Q9FB14 MBTH-LIKE PROTEIN (involved in the biosynthesis of the antitumor drug bleomycin) (see fourth citation below) from Streptomyces verticillus FASTA scores: opt: 220, E(): 8.8e-10, (41.2% identity in 68 aa overlap); etc. PUTATIVE CONSERVED PROTEIN MBTH	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	putative conserved protein MbtH	Code: S; COG: COG3251 putative cytoplasmic protein	Code: S; COG: COG3251 putative cytoplasmic protein	MbtH-like protein	uncharacterized protein conserved in bacteria COG3251	Code: S; COG: COG3251; orf conserved hypothetical protein	mbtH-like protein-related protein identified by match to protein family HMM PF03621	Hypothetical MbtH-like protein	MbtH-like protein	Putative uncharacterized protein	MbtH domain protein PFAM: MbtH domain protein KEGG: sco:SCO0489 hypothetical protein	MbtH domain protein PFAM: MbtH domain protein KEGG: tfu:Tfu_1863 putative conserved protein MbtH	MbtH domain protein PFAM: MbtH domain protein KEGG: mmc:Mmcs_3463 MbtH-like protein	hypotehtical protein mbtH Mapped to H37Rv Rv2377c	Putative conserved protein mbtH	
ECOLI00561	Enterobactin synthetase component F	Enterobactin synthetase component F	Glycine-AMP ligase	Enterobactin synthetase component F	Enterobactin synthase component F	similar to pristinamycin I synthase 3	Residues 1 to 1281 of 1281 are 96 pct identical to residues 1 to 1293 of a 1293 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286313.1 ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F)	Enterobactin synthetase component F	IPR000873: AMP-dependent synthetase and ligase; IPR006162: Phosphopantetheine attachment site; IPR006163: Phosphopantetheine-binding domain enterobactin synthetase, component F (nonribosomal peptide synthetase)	similar to Salmonella typhi CT18 enterobactin synthetase component F enterobactin synthetase component F	Enterobactin synthetase, component F	may be part of enterobactin synthase as component F; Code: Q; COG: COG1020 ATP-dependent serine activating enzyme	may be part of enterobactin synthase as component F; Code: Q; COG: COG1020 ATP-dependent serine activating enzyme	Non-ribosomal peptide synthetase modules and related protein COG1020	may be part of enterobactin synthase as component F; Code: Q; COG: COG1020 ATP-dependent serine activating enzyme	syringopeptin synthetase C identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01733	Enterobactin synthetase component F	Enterobactin synthetase component F	amino acid adenylation domain TIGRFAM: amino acid adenylation domain PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding KEGG: cvi:CV1486 enterobactin synthetase component F	actinomycin synthetase II identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733	amino acid adenylation domain TIGRFAM: amino acid adenylation domain; thioester reductase domain PFAM: AMP-dependent synthetase and ligase; condensation domain protein; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility C-terminal domain KEGG: bsu:BG11243 probable non-ribosomal peptide synthetase	amino acid adenylation domain TIGRFAM: amino acid adenylation domain PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding KEGG: stm:STM0588 enterobactin synthetase, component F (nonribosomal peptide synthetase)	non-ribosomal peptide synthase MxcG identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746	Ferric siderophore synthetase component F	putative non-ribosomal peptide synthetase, terminal component Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	Enterobactin synthetase component F Code: Q; COG: COG1020	non-ribosomal peptide synthase Evidence 2b : Function of strongly homologous gene; Product type e : enzyme	enterobactin synthase multienzyme complex component, ATP-dependent	Non-ribosomal peptide synthetase	
ECOLI00563	Ferric enterobactin transport ATP-binding protein fepC	Ferric enterobactin transport protein FepC	ABC transporter, nucleotide binding/ATPase protein	Ferric enterobactin transport ATP-binding protein FepC	Putative iron transport-related ATP-bidning protein	Ferric enterobactin transport ATP-binding protein fepC	Iron-compound ABC transporter, ATP-binding protein	Ferric vibriobactin ABC transporter, ATP-binding protein	Iron compound ABC transporter, ATP-binding protein	Putative iron-siderophore uptake system ATP- binding component	ATP-binding component of ferric enterobactin transport	SCI51.25c, probable iron-siderophore uptake system ATP-binding component, len: 301 aa; similar to many ATP-binding components from binding-protein-dependent iron uptake systems using a range of siderophores e.g.  SW:FEPC_ECOLI (EMBL:X57471), fepC, Escherichia coli ferric enterobactin transport ATP-binding protein (271 aa), fasta scores; opt: 1101 z-score: 1184.4 E(): 0, 61.5% identity in 260 aa overlap. Similar to other binding-protein-dependent permease subunits e.g. SC9B1.09 (EMBL:AL049727) S.coelicolor putative ABC transporter ATP-binding subunit (386 aa) (37.7% identity in 228 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop) putative iron-siderophore uptake system ATP-binding component	Residues 1 to 271 of 271 are 99 pct identical to residues 48 to 318 of a 318 aa protein from Escherichia coli gb: AAB40787.1 ferric enterobactin transport ATP-binding protein	Putative iron-siderophore transport system,ATP- binding component	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC s+uperfamily (atp_bind), enterobactin transporter	similar to Salmonella typhi CT18 ferric enterobactin transport ATP-binding protein FepC ferric enterobactin transport ATP-binding protein FepC	Putative ABC iron-siderophore transporter, ATP- binding subunit	Putative ABC transporter ATP-binding protein - iron transport	Enterobactin transporter	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components	Code: PH; COG: COG1120 ATP-binding component of ferric enterobactin transport	Code: PH; COG: COG1120 ATP-binding component of ferric enterobactin transport	ABC-type cobalamin/Fe3+-siderophores transport system, ATPase components COG1120	Code: PH; COG: COG1120 ATP-binding component of ferric enterobactin transport	iron compound ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	Ferric enterobactin transport ATP-binding protein FepC	Putative iron-siderophore transport system, ATP- binding component	Ferric enterobactin transport ATP-binding protein fepC	ABC transporter related PFAM: ABC transporter related SMART: AAA ATPase KEGG: pau:PA14_10180 ferric enterobactin transport protein FepC	
ECOLI00562	Ferric enterobactin transport protein fepE	pseudo	Ferric enterobactin transport protein fepE	Ferric enterobactin (Enterochelin) transport	similar to Escherichia coli K12 ferric enterobactin (enterochelin) transport gi: 1786802 (378 aa). BLAST with identity of 97% in 378 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	O-antigen chain length determinant	Ferric enterobactin transport protein	ferric enterobactin (enterochelin) transporter	similar to Salmonella typhimurium ferric enterobactin (enterochelin) transporter ferric enterobactin (enterochelin) transporter	Chain length determinant	Ferric enterobactin (Enterochelin) transporter	enterochelin transport; Code: M; COG: COG3765 ferric enterobactin transport	Code: M; COG: COG3765 ferric enterobactin (enterochelin) transport	enterochelin transport; Code: M; COG: COG3765 ferric enterobactin transport	Ferric enterobactin transport protein FepE	O-antigen chain length determinant	Lipopolysaccharide biosynthesis	Ferric enterobactin transport protein FepE	O-antigen chain length determinant	O-antigen chain length determinant	O-antigen chain length determinant	Chain length determinant protein-like protein KEGG: sec:SC0620 ferric enterobactin (enterochelin) transporter	ferric enterobactin transport protein FepE	Putative uncharacterized protein	Ferric enterobactin transport protein fepE	Regulator of length of O-antigen component of lipopolysaccharide chains	Chain length determinant family protein Wzz	Ferric enterobactin transport protein fepE	Lipopolysaccharide biosynthesis protein	
ECOLI00564	Ferric enterobactin transport system permease protein fepG	ABC transporter, membrane spanning protein	Ferric enterobactin transport protein FepG	ABC-type transporter, permease components	Ferric enterobactin transport system permease protein fepG	Putative iron-siderophore uptake system transmembrane component	Ferric enterobactin transport protein	Residues 1 to 330 of 330 are 99 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286316.1 ferric enterobactin transport protein	Enterobactin-iron transport system permease protein	IPR000522: FecCD transport family ABC superfamily (membrane), ferric enterobactin transporter	similar to Salmonella typhi CT18 ferric enterobactin transport protein FepG ferric enterobactin transport protein FepG	Ferric enterobactin transporter	ABC-type enterobactin transport system inner membrane subunit	Code: P; COG: COG4779 ferric enterobactin transport protein	Code: P; COG: COG4779 ferric enterobactin transport protein	ABC-type enterobactin transport system, permease component COG4779	Code: P; COG: COG4779 ferric enterobactin transport protein	Ferric enterobactin transport system permease protein FepG	Ferric enterobactin transport system permease protein fepG	Iron-siderophore transport system, membrane permease component precursor	ferric enterobactin transport protein FepG	Hypothetical protein	ferric enterobactin transport protein Code: P; COG: COG4779	ferric enterobactin transport system permease protein FepG	Ferric enterobactin transport system, permease component	Transport system permease protein precursor	Ferric enterobactin transport protein	Putative uncharacterized protein	Ferric enterobactin ABC transporter, permease protein FepG	
ECOLI00565	Ferric enterobactin transport system permease protein fepD	ABC-type transporter, permease components	Ferric enterobactin transport system permease protein fepD	Ferric enterobactin (Enterochelin) transport	Residues 1 to 338 of 338 are 99 pct identical to residues 1 to 338 of a 338 aa protein from Escherichia coli gb: AAB40789.1 ferric enterobactin transport protein	IPR000522: FecCD transport family ABC superfamily (membrane), ferric enterobactin (enterochelin) transporter	similar to Salmonella typhi CT18 ferric enterobactin transport protein FepD ferric enterobactin transport protein FepD	Ferric enterobactin (Enterochelin) transporter	Code: P; COG: COG0609 ferric enterobactin (enterochelin) transport	Code: P; COG: COG0609 ferric enterobactin (enterochelin) transport	enterochelin transport; Code: P; COG: COG0609 ferric enterobactin transport	Ferric enterobactin transport system permease protein FepD	Ferric enterobactin transport system permease protein fepD	Ferric enterobactin transport system permease protein precursor	Hypothetical protein	ferric enterobactin (enterochelin) transport Code: P; COG: COG0609	Ferric enterobactin transport system permease protein FepD	ferric enterobactin transport system permease protein FepD	Ferric enterobactin transport system permease protein	Putative iron-siderophore ABC transporter,permease component	Transport system permease protein precursor	Ferric enterobactin (Enterochelin) transport	Putative uncharacterized protein	Ferric enterobactin transport system permease protein fepD	Transport system permease protein precursor	Putative iron-siderophore uptake system transmembrane component precursor	Transport system permease protein precursor	Membrane component of ABC superfamily iron- enterobactin transporter	Iron compound ABC transporter permease protein	
ECOLI00566	Enterobactin exporter entS	Enterobactin exporter entS	Enterobactin exporter entS	Multidrug-efflux transporter	Residues 1 to 409 of 410 are 97 pct identical to residues 1 to 415 of a 416 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286318.1 putative transport	Putative uncharacterized protein TTHA0037	IPR007114: Major facilitator superfamily putative POT family transport protein	similar to Salmonella typhi CT18 hypothetical membrane protein p43 hypothetical membrane protein p43	Enterobactin exporter entS	Code: GEPR; COG: COG0477 putative transport	Code: GEPR; COG: COG0477 putative transport	Code: GEPR; COG: COG0477 putative transport	Enterobactin exporter entS	Enterobactin exporter entS	putative transport Code: GEPR; COG: COG0477	Major facilitator superfamily MFS_1	putative transporter	Major facilitator superfamily MFS_1 precursor	Putative transport	Putative uncharacterized protein	Enterobactin exporter entS	Major facilitator superfamily MFS_1	Major facilitator superfamily MFS_1	Predicted transporter	Enterobactin exporter entS	Enterobactin exporter entS	Siderophore transporter	Putative uncharacterized protein	Enterobactin exporter entS	
ECOLI00567	Ferrienterobactin-binding periplasmic protein	Ferrienterobactin-binding periplasmic protein	Putative substrate-binding family protein	ABC-type Fe3+-siderophores transport systems, periplasmic components	Ferrichrome-binding protein	Iron compound ABC transporter, iron compound- binding protein	Ferrienterobactin-binding periplasmic protein precursor	Ferric vibriobactin ABC transporter, periplasmic ferric vibriobactin-binding protein	Putative iron ABC transporter, priplasmic binding protein	Putative ferric nocobactin-binding protein	Putative iron-siderophore uptake system exported solute-binding component	Ferric enterobactin (Enterochelin) binding protein; periplasmic component	Residues 1 to 318 of 318 are 99 pct identical to residues 1 to 318 of a 318 aa protein from Escherichia coli K12 ref: NP_415124.1 ferric enterobactin (enterochelin) binding protein; periplasmic component	Periplasmic binding protein	Ferrienterobactin-binding periplasmic protein	ferrichrome ABC transporter substrate-binding protein	ABC superfamily (peri_perm), ferric enterobactin (enterochelin) tranporter	similar to Salmonella typhi CT18 ferrienterobactin-binding periplasmic protein precursor ferrienterobactin-binding periplasmic protein precursor	ABC transporter, periplasmic ferric enterobactin binding protein	Ferric enterobactin (Enterochelin) tranporter	iron compound ABC transporter, iron compound-binding protein	identified by match to protein family HMM PF01497 ferric enterobactin (enterochelin) tranporter	enterochelin binding protein; Code: P; COG: COG4592 ferric enterobactin binding protein periplasmic component	Code: P; COG: COG4592 ferric enterobactin (enterochelin) binding protein; periplasmic component	ABC-type Fe2+-enterobactin transport system, periplasmic component COG4592	enterochelin binding protein; periplasmic component; Code: P; COG: COG4592 ferric enterobactin binding protein	Ferrienterobactin-binding periplasmic protein	periplasmic binding protein PFAM: periplasmic binding protein KEGG: gka:GK1457 iron(III) dicitrate ABC transporter (lipoprotein)	Periplasmic binding protein precursor	
ECOLI00568	Isochorismate synthase entC	Anthranilate synthase component I	Putative anthranilate synthase	p-aminobenzoate synthetase	Anthranilate synthase component I	Putative anthranilate synthase component I	Vulnibactin-specific isochorismate synthase	Isochorismate synthase EntC	Isochorismate synthase DhbC	Related to isochorismate synthase	Isochorismate synthase	Isochorismate synthase	Isochorismate synthase	hypothetical isochorismate synthase	Menaquinone-specific isochorismate synthase	Isochorismate synthase entC	identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543 isochorismate synthase DhbC	similar to GP:11992028, and GP:4150886; identified by sequence similarity; putative isochorismate synthase	Vibriobactin-specific isochorismate synthase	Enterobactin synthetase component C	Isochorismate synthase, putative	Putative isochorismate synthase	Isochorismate synthetase, enterochelin biosynthesis	ISOCHORISMATE SYNTHASE DHBC	Putative isochorismate synthase	Isochorismate synthase entC	CDS_ID OB0955 isochorismate synthase	similar to AL583919-136|CAC30318.1| percent identity: 43 in 369 aa putative isochorismate synthase	Anthranilate synthase component I	
ECOLI00569	Enterobactin synthetase component E	Enterobactin synthetase component E	Enterobactin synthase component E	Residues 1 to 536 of 536 are 97 pct identical to residues 1 to 536 of a 536 aa protein from Escherichia coli O157:H7 ref: NP_308660.1 2,3-dihydroxybenzoate-AMP ligase	2,3-dihydroxybenzoate--[carrier protein] ligase	2,3-dihydroxybenzoate-AMP ligase	IPR000873: AMP-dependent synthetase and ligase 2,3-dihydroxybenzoate-AMP ligase	similar to Salmonella typhi CT18 2,3-dihydroxybenzoate-AMP ligase 2,3-dihydroxybenzoate-AMP ligase	2,3-dihydroxybenzoate-AMP ligase	Code: Q; COG: COG1021 2,3-dihydroxybenzoate-AMP ligase	Code: Q; COG: COG1021 2,3-dihydroxybenzoate-AMP ligase	Code: Q; COG: COG1021 2,3-dihydroxybenzoate-AMP ligase	2,3-dihydroxybenzoate-AMP ligase	Enterobactin synthetase component E	2,3-dihydroxybenzoate-AMP ligase Code: Q; COG: COG1021	2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex	2,3-dihydroxybenzoate-AMP ligase, S- dihydroxybenzoyltransferase	2,3-dihydroxybenzoate-AMP ligase	Putative uncharacterized protein	Enterobactin synthetase component E	Enterobactin synthetase component E	Enterobactin synthetase component E	2,3-dihydroxybenzoate-AMP ligase	Enterobactin synthetase component E	Putative uncharacterized protein	Putative 2,3-dihydroxybenzoate-AMP ligase	Peptide arylation enzyme	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00570	Isochorismatase	Phenazine biosynthesis protein PhzD	Vulnibactin-specific isochorismatase	Isochorismatase	Isochorismatase	Isochorismatase	Isochorismatase	putative 2,3-dihydro-2,3-dihydroxybenzoatesynthetase, isochorismatase	Isochorismatase	identified by match to protein family HMM PF00550; match to protein family HMM PF00857 isochorismatase	identified by match to PFAM protein family HMM PF00550 isochorismatase	Vibriobactin-specific isochorismatase	Enterobactin synthetase component B	ISOCHORISMATASE	Isochorismatase	CDS_ID OB0957; 2,3 dihdro-2,3 dihydrobenzoate synthase isochorismatase	Probable isochorismatase	Residues 1 to 285 of 285 are 100 pct identical to residues 1 to 285 of a 285 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286322.1 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase	Isochorismatase	Isochorismatase	InterProMatches:IPR009081, IPR000868; siderophore 2,3-dihydroxybenzoate (DHB) synthesis, Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolism (GO:0008152) isochorismatase	IPR003881: Isochorismatase; IPR006163: Phosphopantetheine-binding domain 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase	similar to Salmonella typhi CT18 isochorismatase isochorismatase	similar to BRA0014, isochorismatase EntB, isochorismatase	isochorismatase	Evidence 2b : Function of strongly homologous gene; Product type e : enzyme 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase	2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase	isochorismatase	isochorismatase	
ECOLI00571	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis	Residues 1 to 258 of 258 are 97 pct identical to residues 1 to 258 of a 258 aa protein from Escherichia coli gb: AAB40796.1 2,3-dihydro-2,3-dihydroxybenzoate	IPR002198: Short-chain dehydrogenase/reductase SDR; IPR002347: Glucose/ribitol dehydrogenase; IPR003560: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	similar to Salmonella typhi CT18 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	Code: IQR; COG: COG1028 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis	Short-chain dehydrogenase/reductase SDR	enterochelin biosynthesis; Code: IQR; COG: COG1028 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	enterochelin biosynthesis; Code: IQR; COG: COG1028 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	2,3-dihydro-2,3-dihydroxybenzoate	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase Code: IQR; COG: COG1028	2,3-dihydroxybenzoate-2,3-dehydrogenase	Short-chain dehydrogenase/reductase SDR	2,3-dihydroxybenzoate-2,3-dehydrogenase	Putative uncharacterized protein	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	Short-chain dehydrogenase/reductase SDR	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	
ECOLI00572	Esterase ybdB	Putative uncharacterized protein	Putative esterase DR_2406	Putative uncharacterized protein STY0643	Esterase ybdB	Putative uncharacterized protein ybdB	Residues 1 to 137 of 137 are 99 pct identical to residues 1 to 137 of a 137 aa protein from Escherichia coli K12 ref: NP_415129.1 orf, conserved hypothetical protein	putative protein PaaI, possibly involved in aromatic compounds catabolism	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein ybdB	conserved hypothetical protein	Code: Q; COG: COG2050 conserved hypothetical protein	Code: Q; COG: COG2050 conserved hypothetical protein	Code: Q; COG: COG2050; orf conserved hypothetical protein	Phenylacetic acid degradation-related protein TIGRFAM: Phenylacetic acid degradation-related protein: (7.8e-20) PFAM: thioesterase superfamily: (3.1e-13) KEGG: dra:DR2406 ComA protein, ev=6e-58, 67% identity	conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Putative uncharacterized protein ybdB	conserved hypothetical protein Code: Q; COG: COG2050	conserved hypothetical protein	Thioesterase superfamily protein	Putative uncharacterized protein ybdB	Putative uncharacterized protein	Putative esterase YbdB	Conserved protein	Putative esterase YbdB	Thioesterase superfamily protein	Putative esterase YbdB	
ECOLI00573	Carbon starvation protein A	Carbon starvation protein A	Putative integral membrane protein	Carbon starvation protein A	Carbon starvation protein A	Carbon starvation protein, predicted membrane protein	Carbon starvation protein A	Carbon starvation protein A	Carbon starvation protein A	identified by match to protein family HMM PF02554 carbon starvation protein A	Carbon starvation protein	Carbon starvation-induced protein	carbon starvation protein	Carbon starvation protein A	Carbon starvation protein	Carbon starvation protein	Residues 1 to 701 of 701 are 99 pct identical to residues 1 to 701 of a 701 aa protein from Escherichia coli K12 ref: NP_415130.1 carbon starvation protein	Putative carbon starvation protein A	Carbon starvation protein CstA	Probable carbon starvation a transmembrane protein	identified by similarity to SP:P15078; match to protein family HMM PF02554 carbon starvation protein A	Mb3090, cstA, len: 758 aa. Equivalent to Rv3063, len: 758 aa, from Mycobacterium tuberculosis strain H37Rv, (99.6% identity in 758 aa overlap). Probable cstA, integral membrane starvation-induced stress response protein, similar to other e.g. P15078|CSTA_ECOLI|B0598 from Escherichia coli strain K12 (701 aa), FASTA scores: opt: 2357, E(): 9.5e-137, (51.25% identity in 712 aa overlap); AAG54933|CSTA from Escherichia coli strain O157:H7 EDL933 (701 aa), FASTA scores: opt: 2356, E(): 1.1e-136, (51.1% identity in 712 aa overlap); etc.  Predicted to be membrane associated. Similarity suggests start at GTG at 16801 in Y22D7 but no RBS obvious so TBparse-predicted start at 16881 taken. BELONGS TO THE CSTA FAMILY. PROBABLE CARBON STARVATION PROTEIN A HOMOLOG CSTA	Carbon starvation protein	carbon starvation protein	similar to Salmonella typhi CT18 carbon starvation protein A carbon starvation protein A	Putative carbon starvation protein A	Putative integral membrane protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type ph : phenotype starvation-induced protein involved in peptide utilization during carbon starvation	Carbon starvation protein CstA	
ECOLI00574	Uncharacterized protein ybdD	Putative uncharacterized protein STY0645	Hypothetical protein ybdD	Residues 1 to 65 of 65 are 100 pct identical to residues 1 to 65 of a 65 aa protein from Escherichia coli K12 ref: NP_415131.1 Uncharacterized conserved protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	Code: S; COG: COG2879 Uncharacterized conserved protein	Code: S; COG: COG2879 Uncharacterized conserved protein	Code: S; COG: COG2879 Uncharacterized conserved protein	Putative uncharacterized protein	Putative uncharacterized protein ybdD	Uncharacterized conserved protein Code: S; COG: COG2879	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved domain protein	
ECOLI00575	Uncharacterized oxidoreductase ybdH	Putative glycerol 1-phosphate dehydrogenase	Putative glycerol dehydrogenase	hypothetical glycerol dehydrogenase	Putative glycerol dehydrogenase	Glycerol dehydrogenase, putative	Putative oxidoreductase	Glycerol dehydrogenase	Lmo1737 protein	Hypothetical oxidoreductase ybdH	Putative iron-containing alcohol dehydrogenase	putative oxidoreductase	Putative glycerol dehydrogenase	Putative uncharacterized protein	Putative oxidoreductase	CDS_ID OB3328 glycerol dehydrogenase	Lin1848 protein	Residues 1 to 362 of 362 are 99 pct identical to residues 1 to 362 of a 362 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286326.1 putative oxidoreductase	Putative dehydrogenase	glycerol dehydrogenase	Glycerol dehydrogenase family enzyme	InterProMatches:IPR001670; Molecular Function: iron ion binding (GO:0005506), Biological Process: metabolism (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491) putative Iron-containing alcohol dehydrogenase	glycerol dehydrogenase	Oxidoreductase	IPR001670: Iron-containing alcohol dehydrogenase putative glycerol dehydrogenase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	Putative dehydrogenase	putative glycerol dehydrogenase	identified by match to protein family HMM PF00465 alcohol dehydrogenase, iron-dependent	
ECOLI00576	Aminotransferase ybdL	Blr3805 protein	highly similar to sp|P47039 Saccharomyces cerevisiae YJL060w singleton, start by similarity	Aminotransferase	Putative N-succinyldiaminopimelate aminotransferase	Aminotransferase, class I	Probable aminotransferase	Putative aminotransferase	PLP-dependent aminotransferases	Putative aminotransferase	Hypothetical aminotransferase ybdL	Probable aminotransferase	Probable aminotransferase	go_component: cytoplasm [goid 0005737]; go_component: mitochondrion [goid 0005739]; go_function: arylformamidase activity [goid 0004061]; go_process: NAD biosynthesis [goid 0009435] aminotransferase, putative	Putative aminotransferase	Aminotransferase, classes I and II	Probable aminotransferase	probable aminotransferase	Aromatic aminotransferase	pseudo	Putative aminotransferase	SCH10.36, probable aspartate aminotransferase, len: 399 aa; similar to many e.g. TR:Q56232 (EMBL:D38459) Thermus aquaticus aspartate aminotransferase (385 aa), fasta scores; opt: 731 z-score: 825.9 E(): 0, 36.5% identity in 392 aa overlap. Note that there are three possible start codons. Similar to many putative aminotransferases from Streptomyces coelicolor e.g.  TR:O54170 (EMBL:AL021411) SC7H1.11, putative aminotransferase (382 aa) (36.6% identity in 331 aa overlap). Contains Pfam match to entry PF00155 aminotran_1, Aminotransferases class-I, score 159.80, E-value 4.6e-44 putative aspartate aminotransferase	Residues 1 to 386 of 386 are 99 pct identical to residues 1 to 386 of a 386 aa protein from Escherichia coli K12 ref: NP_415133.1 putative aminotransferase	Putative aspartate/tyrosine/aromatic aminotransferase protein	Putative uncharacterized protein	Aminotransferase, class I	Mb0881c, -, len: 397 aa. Equivalent to Rv0858c, len: 397 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 397 aa overlap). Probable aminotransferase (EC 2.6.1.-), highly similar to others from Eukaryota and bacteria, especially aspartate aminotransferases (transaminases) (EC 2.6.1.1), e.g.  NP_177890.1|NC_003070 putative aminotransferase from Arabidopsis thaliana (440 aa); NP_419555.1|NC_002696 aminotransferase class I from Caulobacter crescentus (385 aa); NP_415133.1|NC_000913|AE0001|ECAE000165_8 putative aminotransferase from Escherichia coli strain K12 (386 aa), FASTA scores: opt: 830, E(): 0, (38.0% identity in 389 aa overlap); X99521|TAX99521_1 aspartate aminotransferase from Thermus aquaticus (383 aa), FASTA scores: opt: 702, E(): 0, (34.9% identity in 393 aa overlap); etc. Also similar to other putative aminotransferases from Mycobacterium tuberculosis e.g.  Rv2294, Rv3565, etc. PROBABLE AMINOTRANSFERASE	IPR001176: 1-aminocyclopropane-1-carboxylate synthase putative aminotransferase	similar to Salmonella typhi CT18 putative aminotransferase putative aminotransferase	
ECOLI00577	Uncharacterized protein ybdM	EF0120	Putative uncharacterized protein	Putative uncharacterized protein STY0648	Lmo1309 protein	Putative transcriptional regulator	Conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein ybdM	Lin1346 protein	Putative cog1475 transcription regulator transcription regulator protein	putative transcriptional regulator	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	ParB-like nuclease	identified by match to protein family HMM PF02195 ParB-like nuclease domain protein	Similar to Escherichia coli hypothetical protein YbdM or B0601 SWALL:YBDM_ECOLI (SWALL:P77174) (209 aa) fasta scores: E(): 5.6e-25, 48.14% id in 162 aa, and to Bacteroides thetaiotaomicron conserved hypothetical protein, putative transcriptional regulator BT1069 SWALL:AAO76176 (EMBL:AE016930) (180 aa) fasta scores: E(): 2.9e-61, 83.7% id in 178 aa conserved hypothetical protein	Putative transcriptional regulator	ParB-like nuclease	Code: K; COG: COG1475 conserved hypothetical protein	Co-activator of prophage gene expression IbrB	Code: K; COG: COG1475; orf conserved hypothetical protein	co-activator of prophage gene expression	Putative uncharacterized protein	Putative uncharacterized protein ybdM	Co-activator of prophage gene expression IbrB	conserved hypothetical protein	putative transcriptional regulator	Complete genome	conserved hypothetical protein Code: K; COG: COG1475	
ECOLI00578	Uncharacterized protein ybdN	EF0122	Putative uncharacterized protein	Putative uncharacterized protein STY0649	Lmo1310 protein	Putative uncharacterized protein	Conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein ybdN	Lin1347 protein	Probable phosphoadenosine phosphosulfate sulfotransferase protein	Putative uncharacterized protein ylfB	putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	Similar to Escherichia coli hypothetical protein YbdN or B0602 SWALL:YBDN_ECOLI (SWALL:P77216) (406 aa) fasta scores: E(): 1.5e-38, 33.09% id in 420 aa, and to Bacteroides thetaiotaomicron conserved hypothetical protein BT1070 SWALL:AAO76177 (EMBL:AE016930) (434 aa) fasta scores: E(): 2.5e-168, 85.91% id in 433 aa conserved hypothetical protein	Putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	PAPS reductase 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase	Code: R; COG: COG3969 conserved hypothetical protein	Co-activator of prophage gene expression IbrA	co-activator of prophage gene expression	Putative uncharacterized protein	Putative uncharacterized protein ybdN	Co-activator of prophage gene expression IbrA	Predicted phosphoadenosine phosphosulfate sulfotransferase	conserved hypothetical protein	putative phosphoadenosine phosphosulfate sulfotransferase	Complete genome	
ECOLI00579	Uncharacterized HTH-type transcriptional regulator ybdO	Putative lysR-family transcriptional regulator	hypothetical transcriptional regulator	Hypothetical transcriptional regulator ybdO	Transcriptional regulator, LysR family	Putative transcriptional regulator LYSR-type	Residues 1 to 300 of 300 are 97 pct identical to residues 1 to 300 of a 300 aa protein from Escherichia coli K12 ref: NP_415136.1 putative transcriptional regulator LYSR-type	IPR000847: Bacterial regulatory protein LysR, HTH motif putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 putative lysR-family transcriptional regulator putative lysR-family transcriptional regulator	transcriptional regulator	Putative LysR family transcriptional regulator	putative transcriptional regulator	transcriptional regulator, LysR family	Hypothetical transcriptional regulator YbdO	Hypothetical transcriptional regulator YbdO	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	putative transcriptional regulator YbdO	PFAM: regulatory protein LysR KEGG: ppr:PBPRB0854 hypothetical transcriptional regulator transcriptional regulator, LysR family	KEGG: sbl:Sbal_1430 transcriptional regulator, LysR family transcriptional regulator, LysR family	Putative transcriptional regulator	Putative uncharacterized protein	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative uncharacterized protein	Transcriptional regulator, LysR family	
ECOLI00580	Thiol:disulfide interchange protein dsbG	Thiol:disulfide interchange protein DsbG	Thiol:disulfide interchange protein dsbG	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein dsbG	Residues 1 to 268 of 268 are 98 pct identical to residues 1 to 268 of a 268 aa protein from Escherichia coli K12 ref: NP_415137.1 thiol:disulfide interchange protein	Thiol:disulfide interchange protein DsbG	IPR006663: Thioredoxin domain 2 periplasmic disulfide isomerase, thiol-disulphide oxidase	similar to Salmonella typhi CT18 thiol:disulfide interchange protein DsbG precursor thiol:disulfide interchange protein DsbG precursor	Thiol:disulfide interchange protein DsbG	Periplasmic disulfide isomerase, thiol-disulphide oxidase	thiol:disulfide interchange protein DsbG	Code: O; COG: COG1651 thiol:disulfide interchange protein	Evidence 2b : Function of strongly homologous gene; PubMedId : 12731880, 15105427; Product type e : enzyme putative disulfide isomerase, thiol-disulfide oxidase, periplasmic	thiol:disulfide interchange protein	thiol:disulfide interchange protein DsbG	thiol:disulfide interchange protein DsbG	thiol:disulfide interchange protein DsbG	thiol:disulfide interchange protein	Thiol:disulfide interchange protein DsbG	thiol:disulfide interchange protein	Thiol:disulfide interchange protein DsbG	transcriptional regulator, Fis family KEGG: pen:PSEEN1816 disulfide isomerase, thiol-disulphide oxidase, periplasmic	Thiol:disulfide interchange protein DsbG	thiol:disulfide interchange protein DsbG	disulfide isomerase, thiol-disulphide oxidase, periplasmic Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11099799; Product type e : enzyme	thiol:disulfide interchange protein Code: O; COG: COG1651	
ECOLI00581	Alkyl hydroperoxide reductase subunit C	Subunit C of alkyl hydroperoxide reductase	Alkyl hydroperoxide reductase subunit C	Alkyl hydroperoxide reductase C22 protein	Alkyl hydroperoxide reductase C22 protein	Alkyl hydroperoxide reductase	Alkyl hydroperoxide reductase subunit c	Alkyl hydrogen peroxide reductase	Alkyl hydrogen peroxide reductase	Alkyl hydroperoxide reductase, subunit c	Alkyl hydroperoxide reductase subunit C	Peroxiredoxin	Alkyl hydroperoxide reductase subunit C	Peroxiredoxin	Alkyl hydroperoxide reductase subunit C	Alkyl hydroperoxide reductase C22	Probable alkyl hydroperoxide reductase	Alkyl hydroperoxide reductase protein	Alkyl hydroperoxide reductase, C22 subunit	Alkyl hydroperoxide reductase subunit C	identified by match to protein family HMM PF00578 alkyl hydroperoxide reductase, subunit C	Alkyl hydroperoxide reductase, C subunit	Alkyl hydroperoxide reductase	Alkyl hydroperoxide reductase C22 protein	Alkyl hydroperoxide reductase, subunit C	ALKYL HYDROPEROXIDE REDUCTASE	Alkyl hydroperoxide reductase, C subunit	peroxiredoxin	Putative alkyl hydroperoxidase	
ECOLI00582	Alkyl hydroperoxide reductase subunit F	Alkyl hydroperoxide reductase subunit F	Alkyl hydroperoxide reductase subunit F	Alkyl hydroperoxide reductase, subunit f	Alkyl hydroperoxide reductase subunit F	Alkyl hydroperoxide reductase, large subunit	Alkyl hydroperoxide reductase F52A protein	Alkyl hydroperoxide reductase, F subunit	Alkyl hydroperoxide reductase subunit F	Alkyl hydroperoxide reductase subunit F	Probable alkyl hydroperoxide reductase, subunit F	Alkyl hydroperoxide reductase subunit	Alkyl hydroperoxide reductase, subunit F	Alkyl hydroperoxide reductase subunit F	identified by match to protein family HMM PF00070; match to protein family HMM TIGR01369 alkyl hydroperoxide reductase, F subunit	Thioredoxin reductase	Alkyl hydroperoxide reductase, F subunit	Alkyl hydroperoxide reductase subunit F	Alkyl hydroperoxide reductase, subunit F	Alkyl hydroperoxide reductase, F subunit	NADH-peroxiredoxin reductase	Putative NADH oxidase/alkyl hydroperoxidase	Alkyl hydroperoxide reductase, subunit f, truncation	Alkyl hydroperoxide reductase subunit F	NADH oxidase/alkyl hydroperoxidase reductase	Alkyl hydroperoxide reductase, subunit F	Alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides	Alkyl hydroperoxide reductase, large subunit	Residues 1 to 531 of 531 are 99 pct identical to residues 1 to 531 of a 531 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286333.1 alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides	
ECOLI00583	Universal stress protein G	Putative uncharacterized protein	Universal stress protein G	Universal stress protein G	Putative uncharacterized protein	Universal stress protein G	Universal stress protein	Residues 1 to 142 of 142 are 99 pct identical to residues 1 to 142 of a 142 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286334.1 orf, conserved hypothetical protein	universal stress family protein	Universal stress protein	IPR006015: Universal stress protein (Usp) putative Universal stress protein UspA and related nucleotide-binding protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Universal stress protein G	Similar to related nucleotide-binding proteins Universal stress protein UspA	Code: T; COG: COG0589 conserved hypothetical protein	Code: T; COG: COG0589 conserved hypothetical protein	UspA	Code: T; COG: COG0589; orf conserved hypothetical protein	Putative universal stress protein	UspA	Universal stress protein UspG	universal stress protein family identified by match to protein family HMM PF00582	Universal stress protein UspA	conserved hypothetical protein Code: T; COG: COG0589	universal stress protein containing UspA domain PFAM: UspA domain protein KEGG: eci:UTI89_C0610 universal stress protein UspG	universal stress protein UspG	UspA domain protein	Putative uncharacterized protein	UspA domain protein	
ECOLI00584	Uncharacterized zinc-type alcohol dehydrogenase- like protein ybdR	Zinc-type alcohol dehydrogenase-like protein C1198.01 [Source:GeneDB_Spombe;Acc:SPBC1198.01]	Zn-dependent alcohol dehydrogenase	DEHA2D09262p;similar to uniprot|Q5K7P7 Cryptococcus neoformans var CNM01710;	Probable alcohol dehydrogenase	Hypothetical zinc-dependant alcohol dehydrogenase	Oxidoreductase, zinc-binding dehydrogenase family	Glutathione-dependent formaldehyde dehydrogenase	Alcohol dehydrogenase, glutathione-dependent formaldehyde dehydrogenase	identified by match to protein family HMM PF00107 alcohol dehydrogenase, zinc-containing	Glutathione-dependent formaldehyde dehydrogenase	probable Zn-dependent alcohol dehydrogenase	alcohol dehydrogenase	Putative dehydrogenase	Putative oxidoreductase	similar to AE001862-5|AAF12293.1| percent identity: 47 in 390 aa putative glutathione-dependent aldehyde dehydrogenase	Alcohol dehydrogenase	Alcohol dehydrogenase	SC4C6.16, probable glutathione-dependent aldehyde dehydrogenase, len: 396 aa; similar to many e.g.  SW:FADH_METMR (EMBL:L33464), fdh, Methylobacter marinus glutathione-dependent formaldehyde dehydrogenase (424 aa), fasta scores; opt: 1126 z-score: 1211.8 E(): 0, 44.1% identity in 406 aa overlap. Similar to (EMBL:AL049485), SC6A5.31c, S.coelicolor probable zinc-binding alcohol dehydrogenase (363 aa) (31.0% identity in 316 aa overlap).  Contains Pfam match to entry PF00107, adh_zinc, Zinc-binding dehydrogenases and PS00059 Zinc-containing alcohol dehydrogenases signature putative glutathione-dependent aldehyde dehydrogenase	Residues 1 to 412 of 412 are 99 pct identical to residues 1 to 412 of a 412 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286335.1 putative oxidoreductase	Putative uncharacterized protein	InterProMatches:IPR002328; Molecular Function: alcohol dehydrogenase activity, zinc-dependent (GO:0004024), Molecular Function: zinc ion binding (GO:0008270) alcohol dehydrogenase	Zn-dependent alcohol dehydrogenase	Formaldehyde dehydrogenase, glutathione- independent, putative	Putative dehydrogenase	go_function: D-xylulose reductase activity [goid 0046526]; go_process: monosaccharide metabolism [goid 0005996] alcohol dehydrogenase, putative	Zn-dependent alcohol dehydrogenase	alcohol dehydrogenase, glutathione-dependent formaldehyde dehydrogenase	deleted EC_number 1.2.1.1 identified by similarity to SP:P47734; match to protein family HMM PF00107 glutathione-dependent formaldehyde dehydrogenase	

ECOLI00585	Regulator of nucleoside diphosphate kinase	Regulator of nucleoside diphosphate kinase	Nucleoside diphosphate kinase regulator	Transcription elongation factor	Regulator of nucleoside diphosphate kinase	Putative transcription elongation factor	Regulator of nucleoside diphosphate kinase	Regulator of nucleoside diphosphate kinase	similar to GP:15073196, GB:L19158, GB:D26443, GB:U03504, GB:Z31713, SP:P43003, PID:487339, PID:607113, PID:825504, and PID:825663; identified by sequence similarity; putative transcriptional regulator Rnk, putative	Regulator of nucleoside diphosphate kinase	Regulator of nucleoside diphosphate kinase	Putative regulator of nucleoside diphosphate kinase	Regulator of nucleoside diphosphate kinase	Transcription elongation factor	Regulator of nucleoside diphosphate kinase	Regulator of nucleoside diphosphate kinase	nucleoside diphosphate kinase regulator	Putative nucleoside diphosphate kinase regulator	Transcription elongation factor	Residues 1 to 136 of 136 are 100 pct identical to residues 1 to 136 of a 136 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286337.1 regulator of nucleoside diphosphate kinase	Regulator of nucleoside diphosphate kinase	Prokaryotic transcription elongation factor GreA/GreB	Putative regulator of nucleoside diphosphate kinase transcription regulator protein	Regulator of nucleoside diphosphate kinase	Nucleoside diphosphate kinase regulator	regulator of nucleoside diphosphate kinase	similar to Salmonella typhi CT18 regulator of nucleoside diphosphate kinase regulator of nucleoside diphosphate kinase	similar to BRA0614, transcriptional regulator Rnk, hypothetical hypothetical Rnk transcriptional regulator	Regulator of nucleoside diphosphate kinase	
ECOLI00586	Ribonuclease I	Ribonuclease I	Putative ribonuclease	hypothetical ribonuclease	Ribonuclease I	RNase I, cleaves phosphodiester bond between any two nucleotides	Ribonuclease T2	Residues 1 to 274 of 274 are 98 pct identical to residues 1 to 274 of a 274 aa protein from Escherichia coli gb: AAB40811.1 ribonuclease I precursor	Enterobacter ribonuclease protein	similar to Salmonella typhi CT18 ribonuclease I precursor ribonuclease I precursor	Ribonuclease, T2 family	RNase I	Ribonuclease I	ribonuclease T2	cleaves phosphodiester bond between any two nucleotides; Code: J; COG: COG3719 RNase I	cleaves phosphodiester bond between any two nucleotides; Code: J; COG: COG3719 RNase I	ribonuclease T2	Ribonuclease T2	putative ribonuclease I similarity:fasta; with=UniProt:RNI_ECOLI (EMBL:ECD701); Escherichia coli.; rna; Synonyms=rnsA; OrderedLocusNames=b0611;; Ribonuclease I precursor (EC 3.1.27.6) (Enterobacter ribonuclease) (RNase I).  Ribonuclease I precursor (EC 3.1.27.6) (Enterobacter ribonuclease) (RNase I).; length=268; id 30.242; 248 aa overlap; query 37-260; subject 28-268 similarity:fasta; with=UniProt:Q92NJ8_RHIME (EMBL:SME591789); Rhizobium meliloti (Sinorhizobium meliloti).; PUTATIVE RIBONUCLEASE PROTEIN.; length=255; id 50.806; 248 aa overlap; query 20-259; subject 10-253	Ribonuclease T2 precursor	ribonuclease T2	Ribonuclease T2 family identified by match to protein family HMM PF00445	probable enterobacter ribonuclease protein similar to SMc02819 [Sinorhizobium meliloti] Similar to swissprot:Q92NJ8 Putative location:bacterial periplasmic space Psort-Score: 0.9275; go_function: RNA binding [goid 0003723]; go_function: endoribonuclease activity [goid 0004521]	Ribonuclease I	Ribonuclease T2	ribonuclease T2	Ribonuclease I	ribonuclease T2 PFAM: ribonuclease T2 KEGG: bur:Bcep18194_B0733 ribonuclease T2	ribonuclease T2 PFAM: ribonuclease T2 KEGG: bcn:Bcen_3420 ribonuclease T2	
ECOLI00587	Citrate carrier	Citrate carrier	Citrate carrier/transporter	Citrate carrier	DASS family, citrate:succinate transport (antiport) protein	similar to Salmonella typhi CT18 citrate carrier citrate carrier	DASS family, citrate:succinate transport (Antiport) protein	Code: P; COG: COG0471 putative membrane protein	Code: P; COG: COG0471 putative a membrane protein	Citrate/succinate antiporter	Citrate DASS carrier/transporter	Citrate carrier	putative a membrane protein Code: P; COG: COG0471	citrate carrier/transporter	Putative uncharacterized protein	Citrate transporter	Anion transporter	Citrate:succinate antiporter	Sodium:sulfate symporter family protein	Anion transporter	Sodium:sulfate symporter family protein	Putative uncharacterized protein	Putative uncharacterized protein	Citrate carrier	Sodium:sulfate symporter family protein	Sodium:sulfate symporter family protein	Sodium:sulfate symporter family protein	Citrate carrier	Sodium:sulfate symporter family protein	
ECOLI00588	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	ATP:dephospho-CoA triphosphoribosyl transferase	Triphosphoribosyl-dephospho-CoA synthetase	CitG protein	CitG family protein	Probable 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase 2	hypothetical citG protein	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	Probable 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	Probable 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase	Probable 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	Similar to 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase hypothetical protein	conserved gene 2(5'-triphosphoribosyl)-3'-dephosphocoenzyme A synthase CitG, modifier of citrate lyase	Probable 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	CitG 2-(5'triphosphoribosyl)-3'dephosphocoenzyme-A synthase	putative modifier of citrate lyase protein	similar to Salmonella typhi CT18 CitG protein CitG protein	Probable 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase	best blastp match sp|P58159|CITG_STRPY PROBABLE 2-(5'-TRIPHOSPHORIBOSYL)-3'-DEPHOSPHOCOENZYME-A SYNTHASE (2-(5'-TRIPHOSPHORIBOSYL)-3'-DEPHOSPHO-COA SYNTHASE) putative CitG	Probable 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase 2	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	Code: H; COG: COG1767 conserved hypothetical protein	Triphosphoribosyl-dephospho-coenzymeA synthase	Code: H; COG: COG1767 conserved hypothetical protein	Triphosphoribosyl-dephospho-CoA synthase	2'-(5''-triphosphoribosyl)-3-dephospho-CoA synthase	
ECOLI00589	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	Probable CitG protein	Putative uncharacterized protein STY0669	hypothetical citX protein; apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	Probable apo-citrate lyase phosphoribosyl- dephospho-CoA transferase	Probable apo-citrate lyase phosphoribosyl- dephospho-CoA transferase	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	CitX protein	Probable apo-citrate lyase phosphoribosyl- dephospho-CoA transferase	Putative uncharacterized protein citG2	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1786831 (184 aa). BLAST with identity of 98% in 183 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Apo-citrate lyase phosphoribosyl-ft dephospho-CoA transferase	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	putative apo-citrate lyase	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Probable apo-citrate lyase phosphoribosyl- dephospho-CoA transferase	best blastp match sp|P58160|CITX_STRPY PROBABLE APO-CITRATE LYASE PHOSPHORIBOSYL-DEPHOSPHO-COA TRANSFERASE (APO-ACP NUCLEODITYLTRANSFERASE) putative apo-citrate lyase	Putative cytoplasmic protein	apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	Code: HI; COG: COG3697 conserved hypothetical protein	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	Code: HI; COG: COG3697 conserved hypothetical protein	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase identified by match to protein family HMM PF03802	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	
ECOLI00590	Citrate lyase alpha chain	Citrate lyase alpha chain	Citrate lyase alpha subunit	Citrate lyase, alpha subunit	Citrate lyase alpha chain	putative citrate lyase, alpha subunit	Citrate lyase alpha chain	Citrate lyase, alpha subunit	Citrate lyase alpha chain	Citrate lyase alpha chain	Putative citrate lyase alpha subunit	Putative citrate lyase, alfa subunit	Citrate lyase alpha chain	Residues 1 to 510 of 510 are 99 pct identical to residues 1 to 510 of a 510 aa protein from Escherichia coli K12 ref: NP_415148.1 citrate lyase alpha chain	Citrate lyase, alpha chain	Citrate CoA-transferase Citrate lyase alpha chain	citrate lyase, alpha chain citrate lyase alpha chain	Citrate lyase alpha chain	bifunctional citrate lyase alpha chain/citrate-ACP transferase	similar to Salmonella typhi CT18 citrate lyase alpha chain citrate lyase alpha chain	Citrate lyase alpha chain/citrate CoA-transferase	best blastp match gb|AAK34053.1| (AE006559) putative citrate lyase, alpha subunit [Streptococcus pyogenes M1 GAS] putative citrate lyase, alpha subunit	citrase; citrate CoA-transferase subunit; Similar to: HI0022, CILA_HAEIN citrate lyase alpha chain	Citrate lyase alpha chain	citrate CoA-transferase subunit citrate lyase alpha chain	citrate CoA-transferase citrate lyase alpha chain	Code: C; COG: COG3051 citrate lyase alpha chain	Citrate lyase, alpha subunit	Code: C; COG: COG3051 citrate lyase alpha chain	
ECOLI00591	Citrate lyase subunit beta	hypothetical citrate lyase beta subunit	Citrate lyase beta subunit	Citrate lyase, beta subunit	Citrate lyase subunit beta-like protein	Citrate lyase beta chain	Citrate lyase beta subunit	putative citrate lyase, beta subunit	Citrate lyase beta chain (EC 4.1.3.6) (Citrase beta chain) (Citrate	Citrate lyase, beta subunit	conserved hypothetical protein	Citrate lyase beta chain	Putative citrate lyase beta subunit	Putative citrate lyase CilB, citryl-CoA lyase, beta subunit	Citrate lyase beta chain	Residues 1 to 307 of 307 are 99 pct identical to residues 1 to 307 of a 307 aa protein from Escherichia coli K12 ref: NP_415149.1 citrate lyase beta chain (acyl lyase subunit)	Citrate lyase, beta chain	Citryl-CoA lyase subunit Citrate lyase beta chain	citrate lyase beta chain	citrate lyase beta chain (acyl lyase subunit)	similar to Salmonella typhi CT18 citrate lyase beta chain citrate lyase beta chain	Putative citrate lyase, beta subunit	best blastp match gb|AAK34052.1| (AE006559) putative citrate lyase, beta subunit [Streptococcus pyogenes M1 GAS] putative citrate lyase, beta subunit	citrase; Citryl-CoA lyase subunit; Similar to: HI0023, CILB_HAEIN citrate lyase beta chain	Citrate lyase beta chain	citryl-CoA lyase subunit citrate lyase beta chain	citryl-CoA lyase subunit citrate lyase beta chain	Code: G; COG: COG2301 citrate lyase beta chain; acyl lyase subunit	Citrate lyase, beta subunit	
ECOLI00592	Citrate lyase acyl carrier protein	Citrate lyase acyl carrier protein	Citrate lyase acyl carrier protein 1	Citrate lyase acyl carrier protein	Citrate lyase acyl carrier protein	Citrate lyase acyl carrier protein	Citrate lyase acyl carrier protein	Residues 1 to 82 of 82 are 98 pct identical to residues 17 to 98 of a 98 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286344.1 citrate lyase acyl carrier protein (gamma chain)	Citrate lyase acyl carrier protein	Citrate lyase acyl carrier protein	citrate lyase acyl carrier protein (gamma chain)	similar to Salmonella typhi CT18 citrate lyase acyl carrier protein citrate lyase acyl carrier protein	Citrate lyase acyl carrier protein	best blastp match gb|AAK34051.1| (AE006559) putative citrate lyase, gamma subunit [Streptococcus pyogenes M1 GAS] putative citrate lyase, gamma subunit	citrate lyase gamma chain; Similar to: HI0024, CILG_HAEIN citrate lyase acyl carrier protein	Citrate lyase acyl carrier protein 1	citrate lyase gamma chain citrate lyase acyl carrier protein	citrate lyase acyl carrier protein	Code: C; COG: COG3052 citrate lyase acyl carrier protein gamma chain	Citrate lyase, gamma-subunit (Acyl carrier protein)	Code: C; COG: COG3052 citrate lyase acyl carrier protein, gamma chain	Citrate lyase acyl-carrier protein	Citrate lyase acyl-carrier protein	Citrate lyase acyl carrier protein	citrate lyase acyl carrier protein identified by match to protein family HMM PF04953; match to protein family HMM TIGR01608	hypothetical protein similarity to COG3052 Citrate lyase, gamma subunit	Citrate lyase acyl carrier protein	citrate lyase acyl carrier protein	Citrate lyase, gamma subunit	
ECOLI00593	[Citrate [pro-3S]-lyase] ligase	[Citrate [pro-3S]-lyase] ligase	Citrate (Pro-3S)-lyase ligase	Citrate lyase ligase	[citrate (Pro-3S)-lyase] ligase	hypothetical citrate (pro-3S)-lyase ligase	[Citrate [pro-3S]-lyase] ligase	Citrate (Pro-3S)-lyase ligase	[citrate [pro-3s]-lyase] ligase	CitC, [citrate (Pro-3S)-lyase] ligase	Putative citrate lyase synthetase (Citrate	Putative citrate lyase ligase	Citrate lyase synthetase (Citrate	Citrate lyase ligase	Residues 1 to 352 of 352 are 99 pct identical to residues 1 to 352 of a 352 aa protein CITC_ECOLI sp: P77390 [citrate [PRO-3S]-LYASE] ligase (citrate lyase synthetase) (acetate:SH-citrate lyase ligase)	[citrate (Pro-3S)-lyase] ligase	[Citrate [pro-3S]-lyase] ligase	citrate (pro-3S)-lyase ligase citrate lyase ligase	Acetate-SH-citrate lyase ligase	IPR000182: GCN5-related N-acetyltransferase; IPR004821: Cytidyltransferase-related domain; IPR005216: Citrate lyase ligase citrate lyase synthetase (citrate (pro-3S)-lyase ligase	similar to Salmonella typhi CT18 [citrate (pro-3S)-lyase] ligase [citrate (pro-3S)-lyase] ligase	Putative citrate lyase synthetase (Citrate	best blastp match gb|AAK34056.1| (AE006560) putative citrate lyase synthetase (citrate (pro-3S)-lyase ligase) [Streptococcus pyogenes M1 GAS] putative citrate lyase synthetase	citrate lyase synthetase; acetate:SH-citrate lyase ligase; Similar to: HI0025, CITC_HAEIN [citrate [pro-3S]-lyase] ligase	Citrate lyase synthetase (Citrate	citrate lyase synthetase [citrate [pro-3S]-lyase] ligase	[citrate [pro-3S]-lyase] ligase	[citrate (pro-3S)-lyase] ligase (citrate lyase synthetase)	citrate (pro-3S)-lyase ligase; Code: C; COG: COG3053 citrate lyase synthetase	
ECOLI00594	Sensor kinase dpiB	Sensor kinase dpiB	putative PAS/PAC sensing his kinase	Sensor protein	Putative sensor-type protein	CDS_ID OB3251 two-component sensor histidine kinase	SC6A11.11c, possible two-component sensor kinase, len: 552 aa; similar to many eg. SW:P39272 (DCUS_ECOLI) sensor protein DcuS from Escherichia coli (543 aa) fasta scores; opt: 764, z-score: 809.1, E(): 0, 29.3% identity in 540 aa overlap. Contains Pfam match to entry PF00512 signal, Histidine kinase and possible membrane-spanning hydrophobic regions putative two-component sensor kinase	InterProMatches:IPR005467; involved in the response to the environmental Mg-citrate complex, Biological Process: signal transduction (GO:0007165), Molecular Function: kinase activity (GO:0016301) two-component sensor histidine kinase	two-component sensor histidine kinase	IPR004358: Bacterial sensor protein, C-terminal; IPR005467: Histidine kinase sensory histidine kinase in two-component regulatory system with DpiA, regulation of cit operon and plasmid inheritance genes	Sensory histidine kinase in two-component regulatory system with DpiA	sensor histidine kinase	Code: T; COG: COG3290 putative sensor-type protein	signal transduction histidine kinase regulating citrate/malate metabolism PFAM: ATP-binding region, ATPase-like: (4.7e-27) KEGG: bha:BH3839 two-component sensor histidine kinase, ev=1e-73, 35% identity	Sensor kinase DpiB	Sensor kinase DpiB	signal transduction histidine kinase regulating citrate/malate metabolism PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein SMART: PAS domain containing protein KEGG: bat:BAS0527 sensor histidine kinase	signal transduction histidine kinase regulating citrate/malate metabolism PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold domain protein KEGG: mmc:Mmcs_3238 signal transduction histidine kinase regulating citrate/malate metabolism	Sensor kinase protein	Signal transduction histidine kinase regulating citrate/malate metabolism precursor	sensor kinase DpiB	Putative uncharacterized protein	Sensor histidine kinase DpiB	Signal transduction histidine kinase regulating citrate/malate metabolism precursor	signal transduction histidine kinase regulating citrate/malate metabolism PFAM: ATP-binding region, ATPase domain protein KEGG: mmc:Mmcs_3238 signal transduction histidine kinase regulating citrate/malate metabolism	Sensory histidine kinase in two-component regulatory system with citB	Sensor histidine kinase DpiB	Signal transduction histidine kinase regulating citrate/malate metabolism precursor	Sensor histidine kinase DpiB	
ECOLI00595	Transcriptional regulatory protein dpiA	Putative transcriptional regulator CitB	Transcriptional regulatory protein dpia	putative transcriptional regulator CitB	Transcriptional regulatory protein dpiA	identified by match to protein family HMM PF00072 DNA-binding response regulator	Transcriptional regulator CitB	Putative two-component system response regulator	Putative transcriptional regulator CitB	Transcriptional regulatory protein dpiA	CDS_ID OB3250 two-component response regulator	similar to AP001520-62|BAB07557.1| percent identity: 36 in 213 aa putative transcription regulator	Response regulator of citrate/malate metabolism	IPR001789: Response regulator receiver response regulator in two-component regulatory system with DpiB, transcriptional regulation of cit operon (citrate fermentation) genes and of plasmid inheritance genes (OmpR family)	similar to Salmonella typhi Ty2 transcriptional regulatory protein DpiA transcriptional regulatory protein DpiA	Response regulator in two-component regulatory system with DpiB	response regulator	Code: KT; COG: COG4565 sequence similarity to Shigella regulator	similar to Shigella regulator; Code: KT; COG: COG4565 CitB	response regulator receiver and unknown domain protein PFAM: response regulator receiver: (4.2e-23) KEGG: ttj:TTHB173 response regulator, ev=3e-37, 48% identity	Transcriptional regulatory protein DpiA	Transcriptional regulatory protein DpiA	transcriptional regulatory protein DpiA identified by match to protein family HMM PF00072	Response regulator protein	Two-component system response regulator	response regulator receiver PFAM: response regulator receiver; Helix-turn-helix, type 11 domain protein KEGG: vpa:VP1711 response regulator	conserved hypothetical protein	Response regulator receiver	Transcriptional regulatory protein	
ECOLI00596	Anaerobic C4-dicarboxylate transporter dcuC	C4-dicarboxylate anaerobic carrier	DcuC	pseudo	C4-dicarboxylate transporter	C4-dicarboxylate anaerobic carrier	putative C4-dicarboxylate transporter,anaerobic	Anaerobic C4-dicarboxylate transporter dcuC	Probable anaerobic C4-dicarboxylate transporter dcuC	Anaerobic C4-dicarboxylate transporter	C4-dicarboxylate transporter, anaerobic	Anaerobic C4-dicarboxylate transporter dcuC	C4-dicarboxylate transporter	Residues 35 to 495 of 495 are 100 pct identical to residues 1 to 461 of a 461 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286348.1 transport of dicarboxylates	DcuC family, dicarboxylate transporter	similar to Salmonella typhi CT18 C4-dicarboxylate anaerobic carrier C4-dicarboxylate anaerobic carrier	anaerobic C4-dicarboxylate transporter	DcuC family, dicarboxylate transporter	identified by match to protein family HMM PF03600; match to protein family HMM TIGR00784 citrate transporter	Code: C; COG: COG3069 transport of dicarboxylates	Code: C; COG: COG3069 transport of dicarboxylates	Anaerobic C4-dicarboxylate transporter DcuC	Anaerobic C4-dicarboxylate transporter DcuC	anaerobic C4-dicarboxylate transporter DcuC identified by similarity to SP:Q47134; match to protein family HMM PF03606; match to protein family HMM PF06808; match to protein family HMM TIGR00771	Anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter	transport of dicarboxylates Code: C; COG: COG3069	anaerobic C4-dicarboxylate transporter dcuC	Anaerobic c4-dicarboxylate antiporter, DcuC family	
ECOLI00597	Protein crcA	CrcA protein	Putative lipoprotein	Putative lipoprotein	Putative antimicrobial peptide resistance and lipid A acylation protein	Putative lipoprotein	Putative uncharacterized protein crcA	Residues 1 to 186 of 186 are 99 pct identical to residues 1 to 186 of a 186 aa protein from Escherichia coli K12 ref: NP_415155.1 orf, conserved hypothetical protein	Putative exported protein	Complete genome; segment 10/17	Rcp protein, confers resistance to cationic antimicrobial peptides and promotes intracellular infection	conserved gene Rcp	Rcp protein, confers resistance to cationic antimicrobial peptides and promotes intracellular infection	similar to Salmonella typhi CT18 antimicrobial peptide resistance and lipid A acylation protein antimicrobial peptide resistance and lipid A acylation protein	Putative exported protein	PhoPQ-activated gene	conserved hypothetical protein	conserved hypothetical protein	lipid A palmitoyl transferase start codon not provided	conserved hypothetical protein	CrcA protein	Hypothetical protein precursor	putative lipoprotein	CrcA protein	Hypothetical protein precursor	Putative exported protein	conserved hypothetical protein	Hypothetical protein precursor	CrcA protein	
ECOLI00598	Cold shock-like protein cspE	Cold-shock domain family protein	Cold shock protein	Cold shock protein	Cold shock-like protein cspE	Cold shock-like protein cspLB	Cold shock-like protein cspE	Cold shock-like protein	Cold shock-like protein cspE	cold shock protein	Cold-shock domain family protein	Cold shock-like protein cspE	Cold shock-like protein cspE	Cold shock protein	Cold shock-like protein cspLB	Residues 1 to 70 of 70 are 100 pct identical to residues 10 to 79 of a 79 aa protein from Escherichia coli gb: AAB40823.1 cold shock-like protein	Putative cold shock protein	CspE protein	Cold shock-like protein	Cold shock protein	IPR002059: Cold-shock DNA-binding domain RNA chaperone, negative regulator of cspA transcription	similar to Salmonella typhi CT18 cold shock-like protein cspE cold shock-like protein cspE	Putative cold shock protein	Putative transcriptional regulator	identified by match to protein family HMM PF00313 cold-shock domain family protein	Cold shock-like protein cspE	RNA chaperone, negative regulator of cspA transcription	Best Blastp Hit: pir||C81151 cold-shock domain family protein NMB0838 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7226073|gb|AAF41249.1| (AE002437) cold-shock domain family protein [Neisseria meningitidis MC58] COG1278 Cold shock proteins; CspA putative cold shock protein	Code: K; COG: COG1278 cold shock protein	
ECOLI00598	Cold shock-like protein cspE	Cold-shock domain family protein	Cold shock protein	Cold shock protein	Cold shock-like protein cspE	Cold shock-like protein cspLB	Cold shock-like protein cspE	Cold shock-like protein	Cold shock-like protein cspE	cold shock protein	Cold-shock domain family protein	Cold shock-like protein cspE	Cold shock-like protein cspE	Cold shock protein	Cold shock-like protein cspLB	Residues 1 to 70 of 70 are 100 pct identical to residues 10 to 79 of a 79 aa protein from Escherichia coli gb: AAB40823.1 cold shock-like protein	Putative cold shock protein	CspE protein	Cold shock-like protein	Cold shock protein	IPR002059: Cold-shock DNA-binding domain RNA chaperone, negative regulator of cspA transcription	similar to Salmonella typhi CT18 cold shock-like protein cspE cold shock-like protein cspE	Putative cold shock protein	Putative transcriptional regulator	identified by match to protein family HMM PF00313 cold-shock domain family protein	Cold shock-like protein cspE	RNA chaperone, negative regulator of cspA transcription	Best Blastp Hit: pir||C81151 cold-shock domain family protein NMB0838 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7226073|gb|AAF41249.1| (AE002437) cold-shock domain family protein [Neisseria meningitidis MC58] COG1278 Cold shock proteins; CspA putative cold shock protein	Code: K; COG: COG1278 cold shock protein	
ECOLI00599	Protein crcB	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog 3	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog 1	Protein crcB homolog	Protein crcB homolog	Protein crcB homolog 1	Protein crcB homolog 1	Protein crcB homolog	Putative CrcB protein (integral membrane protein possibly involved in chromosome condensation)	


ECOLI00601	Sec-independent protein translocase protein tatE	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatE	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatE	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatE	Sec-independent protein translocase protein tatA/E homolog	Residues 1 to 67 of 67 are 100 pct identical to residues 1 to 67 of a 67 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286353.1 orf, conserved hypothetical protein	Sec-independent protein translocase protein tatA/E homolog	SEC-independent protein translocase protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark sec-independent protein translocase	putative Sec-independent protein secretion pathway component	similar to Salmonella typhi Ty2 sec-independent protein translocase protein TatE sec-independent protein translocase protein TatE	Sec-independent protein translocase protein tatA/E homolog	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter Sec-independent protein secretion pathway, translocase protein	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein secretion pathway components TatA protein	Sec-independent protein translocase TatA	Sec-independent protein secretion pathway component, TatA family	Sec-independent protein translocase protein tatE	Sec-independent protein translocase subunit A	sec-independent protein translocase	
ECOLI00602	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase 1	Lipoyl synthase	Lipoyl synthase	identified by match to PFAM protein family HMM PF03437 lipoic acid synthetase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase 1	Lipoyl synthase 1	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase 1	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	Lipoyl synthase	
ECOLI00603	Uncharacterized HTH-type transcriptional regulator ybeF	LysR-family transcriptional regulator	Putative uncharacterized protein ybeF	Residues 1 to 317 of 317 are 98 pct identical to residues 1 to 317 of a 317 aa protein YBEF_ECOLI sp: P30979 orf, conserved hypothetical protein	IPR000847: Bacterial regulatory protein LysR, HTH motif putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 lysR-family transcriptional regulator lysR-family transcriptional regulator	Transcriptional regulator, LysR family	Putative LysR family transcriptional regulator	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	transcriptional regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	transcriptional regulator, LysR family identified by match to protein family HMM PF00126; match to protein family HMM PF03466	putative transcriptional regulator	putative transcriptional regulator, LysR family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative transcriptional regulator (LysR family) or putative periplasmic binding protein	Putative uncharacterized protein	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein LysR; LysR substrate-binding KEGG: pen:PSEEN5497 transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative uncharacterized protein	
ECOLI00604	Octanoyltransferase	Probable octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Lipoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	putative lipoate-protein ligase B	Lipoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	Octanoyltransferase	
ECOLI00605	UPF0250 protein ybeD	UPF0250 protein NMB1218	UPF0250 protein PM1928	UPF0250 protein PA3998	UPF0250 protein VV0902	UPF0250 protein ybeD	Putative uncharacterized protein	Conserved hypothetical protein	UPF0250 protein ybeD	UPF0250 protein VC_0945	UPF0250 protein BP0104	UPF0250 protein BB0170	UPF0250 protein SO_1163	UPF0250 protein ECA1299	UPF0250 protein BUsg_472	UPF0250 protein BPP0168	Putative uncharacterized protein	UPF0250 protein VP0718	UPF0250 protein ybeD	UPF0250 protein BU488	UPF0250 protein VV1_0282	Residues 1 to 87 of 87 are 100 pct identical to residues 1 to 87 of a 87 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286357.1 orf, conserved hypothetical protein	UPF0250 protein YPO2600/y1174/YP_1113	UPF0250 protein NE1487	UPF0250 protein RSc0326	UPF0250 protein plu1293	UPF0250 protein CV_3095	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	
ECOLI00606	D-alanyl-D-alanine carboxypeptidase dacA	DacA	D-alanine carboxypeptidase	Serine-type D-Ala-D-Ala carboxypeptidase DacF	Penicillin-binding protein 5 precursor	identified by match to TIGR protein family HMM TIGR01692 D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein 5	D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE	D-alanyl-D-alanine carboxypeptidase dacA	CDS_ID OB1842; penicilin binding protein D-alanyl-D-alanine carboxypeptidase	Penicillin binding protein	Penicillin-binding protein	Residues 1 to 403 of 403 are 99 pct identical to residues 1 to 403 of a 403 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286358.1 D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5	Putative penicillin-binding protein 5	Penicillin-binding protein 5	IPR001967: Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5	similar to Salmonella typhi CT18 D-alanine carboxypeptidase D-alanine carboxypeptidase	similar to BR0991, D-alanyl-D-alanine carboxypeptidase D-alanyl-D-alanine carboxypeptidase	Putative penicillin-binding protein 5	D-alanyl-D-alanine carboxypeptidase, penicillin- binding protein 5	Serine-type D-Ala-D-Ala carboxypeptidase	D-alanyl-D-alanine carboxypeptidase	penicillin-binding protein 5; Code: M; COG: COG1686 D-alanyl-D-alanine carboxypeptidase fraction A	D-alanyl-D-alanine carboxypeptidase 1, S11 family	penicillin-binding protein 5; Code: M; COG: COG1686 D-alanyl-D-alanine carboxypeptidase, fraction A	penicillin-binding protein 5	D-alanyl-D-alanine carboxypeptidase	penicillin-binding protein 5; Code: M; COG: COG1686 D-alanyl-D-alanine carboxypeptidase, fraction A	
ECOLI00607	Rare lipoprotein A	Rare lipoprotein A	Rare lipoprotein A	Rare lipoprotein A	Putative lipoprotein	Putative lipoprotein	RlpA-like protein	Rare lipoprotein A	Putative lipoprotein	Rare lipoprotein A	Residues 1 to 362 of 362 are 99 pct identical to residues 1 to 362 of a 362 aa protein from Escherichia coli K12 ref: NP_415166.1 a minor lipoprotein	Rare lipoprotein A	Rare lipoprotein A	Rare lipoprotein A	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark rare lipoprotein A	minor lipoprotein	similar to Salmonella typhi CT18 rare lipoprotein A precursor rare lipoprotein A precursor	Rare lipoprotein A	Rare lipoprotein A	Rare lipoprotein A	rare lipoprotein A	Code: M; COG: COG0797 minor lipoprotein	a minor lipoprotein; Code: M; COG: COG0797 RlpA	rare lipoprotein A	Code: M; COG: COG0797 minor lipoprotein	Rare lipoprotein A	rare lipoprotein A	Rare lipoprotein A	Lipoprotein, rare lipoprotein A family	
ECOLI00608	Rod shape-determining protein rodA	Rod shape-determining protein RodA	Rod shape-determining protein	Rod shape-determining protein	Rod shape-determining protein rodA	similar to GB:X60459, SP:P17181, PID:1247459, PID:1247461, PID:1567383, PID:1567385, PID:306914,  and PID:32672; identified by sequence similarity; putative cell shape-determining protein MrdB, putative	Rod shape determining protein RodA	Cell division protein possibly involved in shape determination	Stage V sporulation protein E	Rod shape-determining protein RodA	RodA	Rod shape-determining protein	RodA protein homolog	Rod shape-determining protein RodA	Rod shape-determining protein rodA	Rod shape-determining protein RodA	Alr0653 protein	Probable rod shape-determining protein	Rod shape-determining protein	Rod shape-determining protein RodA	putative rod shape-determining protein RodA	Rod shape-determining protein	Stage V sporulation protein E	Rod shape-determining protein	Rod shape-determining protein rodA	Cell shape-determining protein MrdB	Rod shape-determining protein RodA	Rod shape-determining protein RodA	Rod shape-determining protein	
ECOLI00609	Penicillin-binding protein 2	Penicillin-binding protein 2	Penicillin-binding protein 2	Penicillin-binding protein 2	Putative penicillin-binding protein	Penicillin binding protein 2	Probable penicillin-binding protein	PBP4 protein	Penicillin-binding protein 2	Pbp2	Penicillin-binding protein 2	Penicillin-binding protein 2	Probable penicillin-binding protein	Penicillin-binding protein 2	Penicillin-binding protein	Penicillin-binding protein	Penicillin-binding protein 2	identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF05223 penicillin-binding protein	Penicillin-binding protein	Cell division protein FtsI, penicillin-binding protein	Penicillin-binding protein 2	Penicillin-binding protein	Penicillin-binding protein 2	Penicillin-binding protein	Penicillin-binding protein 2	penicillin-binding protein	Putative penicillin-binding protein	Penicillin-binding protein 2	Penicillin-binding protein 2b	
ECOLI00610	UPF0247 protein ybeA	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Putative ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	UPF0247 protein VV0907	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	Ribosomal RNA large subunit methyltransferase H	
ECOLI00611	Uncharacterized protein ybeB	Iojap-related protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein HI0034	similar to GB:M22916, GB:L10505, SP:P39790, PID:143210, PID:143702,  and GB:AL009126; identified by sequence similarity; putative hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Iojap-related protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV0908	Putative uncharacterized protein	Iojap protein family	Putative uncharacterized protein STY0693	Iojap-like ribosome-associated protein	Putative uncharacterized protein	Lmo1486 protein	Putative uncharacterized protein ML1453	Putative uncharacterized protein	Iojap protein family	Iojap-related protein	
ECOLI00612	Alpha-ribazole phosphatase	conserved hypothetical protein;	Putative protein of unknown function with some similarity to GPM1/YKL152C, a phosphoglycerate mutase; YOR283W is not an essential gene.  [Source:SGD;Acc:S000005809]	Phosphoglycerate mutase family, putative	Phosphoglycerate mutase	Slr1748 protein	DEHA2G09130p;similar to CA4916|IPF1425 Candida albicans IPF1425;	GpmB	Phosphoglycerate mutase	Phosphoglycerate mutase	Alpha-ribazole phosphatase	Alr5200 protein	Phosphoglycerate mutase family protein	Putative uncharacterized protein	Lmo1149 protein	Phosphoglycerate mutase/fructose-2,6- bisphosphatase	Phosphoglycerate mutase	hypothetical protein	Alpha-ribazole-5'-phosphate phosphatase	identified by match to protein family HMM PF00300 phosphoglycerate mutase family protein	Phosphoglycerate mutase family protein	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737] conserved hypothetical protein	Alpha-ribazole-5'-phosphate phosphatase, putative	Phosphoglycerate mutase variant	Alpha-ribazole-5-phosphate phosphatase	Homolog of Salmonella cobC, a phosphohistidine protein	Possible alpha-ribazole-5`-phosphate phosphatase CobC	Alpha-ribazole-5'-phosphate phosphatase, CobC	Alpha-ribazole-5'-phosphate phosphatase	
ECOLI00613	Nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Putative nicotinate-nucleotide adenylyltransferase	Possible nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase 1	pseudo	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Putative nicotinate-nucleotide adenylyltransferase	Probable nicotinate-nucleotide adenylyltransferase	Nicotinate-nucleotide adenylyltransferase	
ECOLI00614	DNA polymerase III subunit delta	DNA polymerase III delta subunit	DNA polymerase III delta subunit	DNA polymerase III subunit delta	DNA polymerase III, delta subunit	HolA	DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	Lmo1481 protein	Putative DNA polymerase III	hypothetical DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	Putative DNA polymerase III, delta subunit	Putative DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	Putative uncharacterized protein	DNA polymerase III subunit delta	DNA polymerase III, delta subunit	Putative DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	DNA polymerase III, delta subunit	DNA polymerase III subunit delta	DNA polymerase III, delta subunit	
ECOLI00615	LPS-assembly lipoprotein rlpB	Putative uncharacterized protein	Rare lipoprotein B	LPS-assembly lipoprotein lptE	hypothetical rare lipoprotein B	LPS-assembly lipoprotein rlpB precursor	Rare lipoprotein B	Rare lipoprotein B	LPS-assembly lipoprotein lptE	Rare lipoprotein B	LPS-assembly lipoprotein lptE	Rare lipoprotein B	Residues 1 to 193 of 193 are 98 pct identical to residues 1 to 193 of a 193 aa protein from Escherichia coli K12 ref: NP_415174.1 a minor lipoprotein	LPS-assembly lipoprotein lptE	LPS-assembly lipoprotein lptE	Rare lipoprotein B	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark lipoprotein	minor lipoprotein	similar to Salmonella typhi CT18 rare lipoprotein B precursor rare lipoprotein B precursor	LPS-assembly lipoprotein lptE	rare lipoprotein B precursor	Similar to: HI0922, Y922_HAEIN conserved predicted lipoprotein	Rare lipoprotein B RlpB protein	Rare lipoprotein B	LPS-assembly lipoprotein lptE	identified by similarity to SP:P10101; match to protein family HMM PF04390 rare lipoprotein B	possible rare lipoprotein B	ortholog to Escherichia coli bnum: b0641; MultiFun: Metabolism 1.6.10 rare lipoprotein B precursor	Code: M; COG: COG2980 minor lipoprotein	
ECOLI00616	Leucyl-tRNA synthetase	Mitochondrial leucyl-tRNA synthetase, also has a direct role in splicing of several mitochondrial group I introns; indirectly required for mitochondrial genome maintenance. [Source:SGD;Acc:S000004374]	similar to ca|CaNAM2 Candida albicans mitochondrial leucinetRNA ligase, start by similarity	Leucyl-tRNA synthetase	similar to sp|P11325 Saccharomyces cerevisiae YLR382c NAM2 leucine--tRNA ligase precursor, mitochondrial singleton, start by similarity	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	similar to uniprot|P11325 Saccharomyces cerevisiae YLR382c NAM2;	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase subunit alpha	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	Leucyl-tRNA synthetase	
ECOLI00617	Uncharacterized protein ybeL	Putative uncharacterized protein STY0704	Conserved hypothetical protein	Hypothetical protein ybeL	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP0728	Uncharacterized protein ybeL	Putative uncharacterized protein	Residues 1 to 160 of 160 are 97 pct identical to residues 1 to 160 of a 160 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286369.1 putative alpha helical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	Putative cytoplasmic protein	identified by similarity to OMNI:VC0957 conserved hypothetical protein	putative alpha helical protein	conserved hypothetical protein YbeL	putative alpha helical protein	conserved hypothetical protein	putative alpha helical protein	Putative cytoplasmic protein	Hypothetical protein	Putative uncharacterized protein ybeL	Hypothetical protein	Hypothetical protein	conserved hypothetical protein identified by similarity to GB:AAF94119.1; match to protein family HMM PF07295	Hypothetical protein	
ECOLI00618	Uncharacterized protein ybeQ	Putative uncharacterized protein	Uncharacterized protein NMB1327	Putative lipoprotein	Putative uncharacterized protein	Putative beta-lactamase hcpC	Putative uncharacterized protein	Residues 1 to 327 of 327 are 96 pct identical to residues 1 to 327 of a 327 aa protein from Escherichia coli K12 ref: NP_415177.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative TPR repeat protein	Hypothetical protein	Putative uncharacterized protein	with TRP repeat, SEL1 subfamily; COG0790 conserved hypothetical protein	Putative TPR repeat protein	TPR repeat protein, SEL1 subfamily	Code: R; COG: COG0790 conserved hypothetical protein	Conserved tetratricopeptide repeat (TPR) protein	Code: R; COG: COG0790 conserved hypothetical protein	Sel1	Sel1-like repeat	Sel1-like repeat protein	Code: R; COG: COG0790; orf conserved hypothetical protein	Sel1 precursor	Sel1 domain protein repeat-containing protein precursor	Putative uncharacterized protein	Sel1 domain protein repeat-containing protein PFAM: Sel1 domain protein repeat-containing protein KEGG: nmu:Nmul_A0104 Sel1-like repeat	Hypothetical protein	Sel1 domain protein repeat-containing protein PFAM: Sel1 domain protein repeat-containing protein KEGG: nmu:Nmul_A0104 Sel1-like repeat	TPR repeat protein	
ECOLI00619	Uncharacterized protein ybeR	Residues 1 to 235 of 235 are 97 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli K12 ref: NP_415178.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ybeR	Putative uncharacterized protein ybeR	Putative uncharacterized protein ybeR	YbeR protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI00620	Uncharacterized J domain-containing protein djlB	Residues 1 to 475 of 475 are 96 pct identical to residues 1 to 475 of a 475 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286373.1 putative enzyme of polynucleotide modification	IPR001623: Heat shock protein DnaJ, N-terminal putative molecular chaperone, DnaJ family	putative enzyme of polynucleotide modification	putative enzyme of polynucleotide modification	putative enzyme of polynucleotide modification	DnaJ domain protein	Predicted chaperone	Heat shock protein DnaJ domain protein	DnaJ domain protein	DnaJ domain protein	Putative uncharacterized protein	Putative DnaJ-class chaperone	Putative DnaJ-class chaperone	Putative DnaJ-class chaperone	Predicted chaperone	Predicted chaperone	predicted DnaJ family chaperone DjlB	
ECOLI00621	Uncharacterized protein ybeT	Putative uncharacterized protein ybeT	Residues 1 to 184 of 184 are 97 pct identical to residues 1 to 184 of a 184 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286374.1 orf, conserved hypothetical protein	Putative uncharacterized protein	with TRP repeat, SEL1 subfamily; COG0790 conserved hypothetical protein	Similar to: HI1625, YG25_HAEIN conserved hypothetical protein	Code: R; COG: COG0790 conserved hypothetical protein	Sel1 domain protein repeat-containing protein PFAM: Sel1 domain protein repeat-containing protein KEGG: cch:Cag_1938 Sel1-like repeat	Putative signal peptide	conserved hypothetical protein Code: R; COG: COG0790	Sel1 domain and tetratricopeptide repeat-containing protein PFAM: Sel1 domain protein repeat-containing protein KEGG: lpn:lpg1172 TPR repeat protein	Hypothetical protein	Putative uncharacterized protein	Sel1 domain protein repeat-containing protein precursor	Putative uncharacterized protein	Conserved outer membrane protein	Sel1 domain protein repeat-containing protein	Putative uncharacterized protein	Sel1 domain protein repeat-containing protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ybeT	Putative uncharacterized protein ybeT	Putative uncharacterized protein ybeT	Conserved outer membrane protein	Sel1 domain protein repeat-containing protein	Conserved outer membrane protein	Sel1 domain protein repeat-containing protein	conserved predicted outer membrane protein	
ECOLI00622	Uncharacterized protein ybeU	Residues 1 to 235 of 235 are 97 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286375.1 putative tRNA ligase	putative tRNA ligase	putative tRNA ligase	Putative uncharacterized protein	Predicted tRNA ligase	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative tRNA ligase	Putative uncharacterized protein ybeU	Putative uncharacterized protein ybeU	Putative uncharacterized protein ybeU	Predicted tRNA ligase	Predicted tRNA ligase	predicted tRNA ligase	
ECOLI00623	Uncharacterized J domain-containing protein djlC	Putative molecular chaperone, DnaJ family	conserved hypothetical protein	conserved hypothetical protein	DnaJ domain protein	Hsc56 co-chaperone of HscC	Heat shock protein DnaJ domain protein	DnaJ domain protein	Putative uncharacterized protein	DnaJ domain protein	DnaJ domain protein	DnaJ domain protein	YbeV protein	DnaJ domain protein	DnaJ domain protein	YbeV protein	Putative uncharacterized protein	Hsc56 co-chaperone of HscC	Hsc56 co-chaperone of HscC	Hsc56 co-chaperone of HscC	Hsc56 co-chaperone of HscC	Hsc56 co-chaperone of HscC	
ECOLI00624	Chaperone protein hscC	Chaperone protein hscC	PMID: 9735342 best DB hits: BLAST: swissprot:P77319; HSCC_ECOLI CHAPERONE PROTEIN HSCC (HSC62); E=1e-92 gb:AAG54984.1; AE005244_2 (AE005244) putative dnaK protein; E=3e-91 embl:CAA06391.1; (AJ005129) dnaK [Thermotoga maritima]; E=3e-88 COG: ybeW; COG0443 Molecular chaperone; E=1e-93 PFAM: PF01869; BadF/BadG/BcrA/BcrD ATPase fa; E=0.37 PF00012; Hsp70 protein; E=9.1e-147 chaperone protein HscC	Putative dnaK protein	similar to Escherichia coli K12 putative dnaK protein gi: 1786870 (557 aa). BLAST with identity of 98% in 554 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	IPR001023: Heat shock protein Hsp70 putative heatshock protein, homolog of hsp70 in Hsc66 subfamily	Putative heatshock protein, homolog of hsp70 in Hsc66 subfamily	chaperone protein, hsp70 family	Code: O; COG: COG0443 putative dnaK protein	Code: O; COG: COG0443 putative dnaK protein	Heat shock protein Hsp70	Heat shock protein Hsp70	dnaK family protein identified by match to protein family HMM PF00012	dnaK family protein identified by match to protein family HMM PF00012	DnaK family protein identified by match to protein family HMM PF00012	Molecular chaperone, hsp70 family	Complete genome	chaperone protein HscC Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type f : factor	Chaperone protein	putative dnaK protein Code: O; COG: COG0443	chaperone protein, hsp70 family	2-alkenal reductase	DnaK family protein HscC	2-alkenal reductase	2-alkenal reductase	DnaK9	Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription	2-alkenal reductase	DnaK family protein HscC	
ECOLI00625	Pyrimidine-specific ribonucleoside hydrolase rihA	Purine nucleosidase, putative	Nonspecific ribonucleoside hydrolase	Inosine-uridine preferring nucleoside hydrolase	Pyrimidine-specific ribonucleoside hydrolase rihA	putstive inosine-uridine preferring nucleoside hydrolase family protein	Pyrimidine-specific ribonucleoside hydrolase rihA	identified by match to PFAM protein family HMM PF01156 inosine-uridine preferring nucleoside hydrolase	Pyrimidine-specific ribonucleoside hydrolase rihA	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE NUCLEOSIDE HYDROLASE PROTEIN	Inosine/uridine-preferring nucleoside hydrolase	INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE	Pyrimidine-specific ribonucleoside hydrolase rihA	SCH63.26, probable nucleoside hydrolase, len: 326 aa; similar to SW:IUNH_CRIFA (EMBL:U43371) Crithidia fasciculata inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) IunH, 314 aa; fasta scores: opt: 634 z-score: 671.5 E(): 6.9e-30; 35.0% identity in 320 aa overlap. Contains Pfam match to entry PF01156 IU_nuc_hydro, Inosine-uridine preferring nucleoside hydrolase putative nucleoside hydrolase	Residues 12 to 322 of 322 are 99 pct identical to residues 1 to 311 of a 311 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286377.1 putative tRNA synthetase	Putative inosine-uridine preferring nucleoside hydrolase transmembrane protein	Inosine-uridine nucleoside N-ribohydrolase	IPR001910: Inosine/uridine-preferring nucleoside hydrolase putative purine nucleoside hydrolase	similar to Salmonella typhi CT18 probable nucleoside hydrolase probable nucleoside hydrolase	similar to BRA0006, inosine-uridine preferring nucleoside hydrolase inosine-uridine preferring nucleoside hydrolase	Inosine-uridine preferring nucleoside hydrolase	Evidence 2b : Function of strongly homologous gene; Product type e : enzyme inosine-uridine preferring nucleoside hydrolase	Pyrimidine-specific ribonucleoside hydrolase rihA	Inosine-uridine preferring nucleoside hydrolase	go_component: cytoplasm [goid 0005737]; go_function: purine nucleosidase activity [goid 0008477]; go_function: ribosylpyrimidine nucleosidase activity [goid 0050263]; go_process: purine ribonucleoside salvage [goid 0006166]; go_process: pyrimidine nucleoside salvage [goid 0043097] nucleoside hydrolase, putative	identified by match to protein family HMM PF01156 inosine/uridine-preferring nucleoside hydrolase	Inosine/uridine-preferring nucleoside hydrolase	Code: F; COG: COG1957 putative tRNA synthetase	similar to gi|57286688|gb|AAW38782.1| [Staphylococcus aureus subsp. aureus COL], percent identity 74 in 311 aa, BLASTP E(): e-135 putative inosine-uridine preferring nucleoside hydrolase	
ECOLI00626	Glutamate/aspartate transport ATP-binding protein gltL	Amino acid ABC transporter ATP binding protein	ABC transporter, nucleotide binding/ATPase protein	Glutamate/aspartate transport ATP-binding protein GltL	Glutamate/aspartate transport ATP-binding protein	Glutamate/aspartate transport ATP-binding protein gltL	pseudo	Glutamate/aspartate transport ATP-binding protein	Glutamate/aspartate transport ATP-binding protein	Amino acid ABC transporter, ATP-binding protein	Glutamate/aspartate transport ATP-binding protein	Glutamate/aspartate ABC transporter, ATP-binding protein	Glutamate/aspartate transport ATP-binding protein gltL	Glutamate /aspartate transport ATP-binding protein	Residues 1 to 241 of 241 are 99 pct identical to residues 1 to 241 of a 241 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286378.1 ATP-binding protein of glutamate-aspartate transport system	Putative glutamate/aspartate transport ATP- binding protein	Putative glutamate/aspartate transport atp- binding abc transporter protein	Glutamate/aspartate transport ATP-binding protein GltL	identified by similarity to SP:P41076; match to protein family HMM PF00005 glutamate/aspartate ABC transporter, ATP-binding protein	ABC superfamily (Glutamate/aspartate transporter), ATP-binding protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp_bind), glutamate/aspartate transporter	similar to Salmonella typhi CT18 glutamate/aspartate transport ATP-binding protein GltL glutamate/aspartate transport ATP-binding protein GltL	Glutamate /aspartate transport ATP-binding protein	ABC glutamate/aspartate transporter, ATP binding subunit gltL	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter glutamate/aspartate transport protein (ABC superfamily, atp_bind)	Amino acid ABC transporter, ATP-binding protein	Glutamate/aspartate transporter	ABC transporter protein, ATP-binding component	identified by match to protein family HMM PF00005 amino acid ABC transporter, ATP-binding protein	
ECOLI00627	Glutamate/aspartate transport system permease protein gltK	Amino acid ABC transporter membrane protein	Glutamate/aspartate transport system permease protein GltK	Glutamate/aspartate transport system permease protein	Glutamate/aspartate transport system permease protein gltK	Glutamate/aspartate transport system permease protein	Glutamate/aspartate transport system permease protein	Glutamate/aspartate transport system permease protein	Amino acid ABC transporter, permease protein	Glutamate/aspartate transport system permease protein	Glutamate/aspartate ABC transporter, permease protein	Glutamate/aspartate transport system permease protein gltK	Amino acid permease	Residues 1 to 224 of 224 are 99 pct identical to residues 1 to 224 of a 224 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286379.1 glutamate-aspartate transport system permease	Putative glutamate/aspartate transport system permease	Probable glutamate/aspartate transmembrane abc transporter protein	Glutamate/aspartate transport system permease protein GltK	ABC superfamily (membrane), glutamate/aspartate transporter	similar to Salmonella typhi CT18 glutamate/aspartate transport system permease protein GltK glutamate/aspartate transport system permease protein GltK	ABC glutamate/aspartate transporter, permease subunit gltK	Amino acid ABC transporter, permease protein	Glutamate/aspartate transporter	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 amino acid ABC transporter, permease protein	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 probable permease of ABC transporter PA1340	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Code: E; COG: COG0765 glutamate/aspartate transport system permease	Code: E; COG: COG0765 glutamate-aspartate transport system permease	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	
ECOLI00628	Glutamate/aspartate transport system permease protein gltJ	Amino acid ABC transporter membrane protein	Glutamate/aspartate transport system permease protein GltJ	Glutamate/aspartate transport system permease protein	Glutamate/aspartate transport system permease protein gltJ	pseudo	Glutamate/aspartate transport system permease protein	Glutamate/aspartate transport system permease protein	Amino acid ABC transporter, permease protein	Glutamate/aspartate transport system permease protein	Glutamate/aspartate transport system permease	Amino acid permease	Residues 1 to 246 of 246 are 99 pct identical to residues 1 to 246 of a 246 aa protein from Escherichia coli K12 ref: NP_415187.1 glutamate-aspartate transport system permease	Putative glutamate/aspartate transport system permease	Probable glutamate/aspartate transmembrane abc transporter protein	Glutamate/aspartate transport system permease protein GltJ	ABC superfamily (membrane), glutamate/aspartate transporter	similar to Salmonella typhi CT18 glutamate/aspartate transport system permease protein GltJ glutamate/aspartate transport system permease protein GltJ	ABC glutamate/aspartate transporter, permease subunit gltJ	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter glutamate/aspartate transport protein (ABC superfamily, membrane)	Amino acid ABC transporter, permease protein	Glutamate/aspartate transporter	putative ABC transporter protein,probable glutamate/aspartate transmembrane subunit	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 amino acid ABC transporter, permease protein	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 probable permease of ABC transporter PA1341	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Code: E; COG: COG0765 glutamate/aspartate transport system permease	Code: E; COG: COG0765 glutamate-aspartate transport system permease	

ECOLI00629	Glutamate/aspartate periplasmic-binding protein	Sll0224 protein	Probable binding protein component of ABC transporter	ABC transporter periplasmic binding protein	Binding protein of ABC transporter component	Glutamate/aspartate periplasmic binding protein	Glutamate/aspartate Periplasmic binding protein	Glutamate/aspartate periplasmic binding protein	Amino acid ABC transporter, periplasmic amino acid-binding protein	Putative periplasmic binding transport protein	Residues 1 to 327 of 327 are 98 pct identical to residues 1 to 327 of a 327 aa protein from Escherichia coli dbj: BAA35307.1 Hypothtical protein in gltJ 5'region .	Putative amino acid-binding protein	Glutamate/aspartate transport system permease protein GltI	Probable amino acid ABC transporter, periplasmic amino acid-binding protein	IPR001311: Solute-binding protein/glutamate receptor; IPR001638: Bacterial extracellular solute-binding protein, family 3 ABC superfamily (bind_prot), glutamate/aspartate transporter	similar to Salmonella typhi Ty2 ABC transporter periplasmic binding protein ABC transporter periplasmic binding protein	ABC transporter, periplasmic glutamate/aspatate binding protein	Amino acid ABC transporter, periplasmic amino acid-binding protein	Glutamate/aspartate periplasmic-binding protein	putative ABC transporter, glutamate receptor	putative extracellular solute-binding protein	identified by match to protein family HMM PF00497 amino acid ABC transporter, periplasmic amino acid-binding protein	identified by match to protein family HMM PF00497 amino acid ABC transporter, periplasmic amino acid-binding protein	extracellular solute-binding protein, family 3	extracellular solute-binding protein, family 3	Code: ET; COG: COG0834 putative periplasmic binding transport protein	Code: ET; COG: COG0834 putative periplasmic binding transport protein	extracellular solute-binding protein, family 3	extracellular solute-binding protein, family 3	
ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	
ECOLI00630	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase 1	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Related to apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Putative uncharacterized protein MLCB2052.01	putative apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	similar to GB:M81883, GB:M86522, GB:S61897, GB:S34531, SP:Q99259, PID:1247492, PID:1247494, PID:182936, PID:182938, PID:183272, PID:292042, and PID:298099; identified by sequence similarity; putative apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase	Apolipoprotein N-acyltransferase 1	Apolipoprotein N-acyltransferase	PMID: 8344936 best DB hits: BLAST: swissprot:Q9ZDG3; LNT_RICPR APOLIPOPROTEIN N-ACYLTRANSFERASE (ALP; E=7e-14 pir:A82261; apolipoprotein N-acyltransferase VC0958 [imported] -; E=2e-12 swissprot:P44626; LNT_HAEIN APOLIPOPROTEIN N-ACYLTRANSFERASE (ALP; E=1e-10 COG: RP366; COG0815 Apolipoprotein N-acyltransferase; E=6e-15 probable apolipoprotein N-acyltransferase	predicted by Codon_usage predicted by Homology predicted by FrameD APOLIPOPROTEIN N-ACYLTRANSFERASE (ACID-INDUCIBLE GENE) TRANSMEMBRANE	
ECOLI00631	Magnesium and cobalt efflux protein corC	CBS domain protein	Magnesium and cobalt efflux protein	Polar amino acid transporter	Magnesium and cobalt efflux protein corC	Hemolysin-related protein, containing CBS domain	Putative uncharacterized protein	CBS domain protein	Hemolysin C homolog	Putative uncharacterized protein	Magnesium and cobalt efflux protein corC	Putative uncharacterized protein	Putative hemolysin	Hemolysin	Magnesium and cobalt efflux protein corC	Putative uncharacterized protein	Hemolysin-related protein	Putative cation transporter efflux protein	OrpB	putative hemolysin	Hemolysin	Magnesium and cobalt efflux protein corC	identified by match to PFAM protein family HMM PF03471 CBS domain protein	Magnesium and cobalt efflux protein corC	Hemolysin C	Magnesium and cobalt efflux protein	Magnesium and cobalt efflux protein	Magnesium and cobalt efflux protein CorC	Hemolysin	
ECOLI00632	Putative metalloprotease ybeY	Putative metalloprotease FN0746	Putative metalloprotease PD_1781	Putative metalloprotease slr0053	Putative metalloprotease XCC2331	Putative metalloprotease HI0004	Putative metalloprotease SAV_5584	Putative metalloprotease CPE2018	Putative metalloprotease EF_2412	Putative metalloprotease CC_0054	Putative metalloprotease RC1142	Putative metalloprotease NMB0538	Putative metalloprotease PM1045	Putative metalloprotease PA3982	Putative metalloprotease Cj0121	Putative metalloprotease VV0915	Putative metalloprotease DR_2092	Putative metalloprotease LA_1684	Putative metalloprotease ybeY	Putative metalloprotease BA_4527/GBAA_4527/BAS4202	Putative metalloprotease lmo1465	Putative metalloprotease BC_4300	Putative metalloprotease BT9727_4040	Putative predicted metal dependent hydrolase	Putative metalloprotease Bd1487	Putative metalloprotease ybeY	Putative metalloprotease SP_0967	identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043 conserved hypothetical protein TIGR00043	identified by match to PFAM protein family HMM PF02130 conserved hypothetical protein TIGR00043	
ECOLI00633	PhoH-like protein	ATP binding protein	PhoH-like protein	ATP-binding protein	Phosphate starvation-inducible protein, PhoH	PhoH family protein	Phosphate starvation-inducible protein	PhoH-related protein	PhoH	Putative uncharacterized protein	Phosphate starvation-inducible protein PhoH	PhoH-like ATP-binding protein	Phosphate starvation-inducible protein	Probable phosphate starvation-induced protein	Phosphate starvation-inducible protein PhoH, predicted ATPase	Phosphate starvation-inducible protein PhoH	putative phoH family protein	PhoH-like protein	identified by match to PFAM protein family HMM PF00270 PhoH family protein	PhoH family protein	PhoH-like protein	PhoH-like protein	PhoH family protein	PhoH-like ATP-binding protein	PMID: 8444794 best DB hits: BLAST: swissprot:P46343; PHOL_BACSU PHOH-LIKE PROTEIN ----- pir:; E=1e-70 ddbj:BAB05080.1; (AP001511) phosphate starvation-induced protein; E=4e-69 embl:CAA12155.1; (AJ224829) ORF4 [Bacillus megaterium]; E=8e-69 COG: BS_phoH; COG1702 Phosphate starvation-inducible protein PhoH,; E=1e-71 ybeZ; COG1702 Phosphate starvation-inducible protein PhoH, predicted; E=4e-68 Rv2368c; COG1702 Phosphate starvation-inducible protein PhoH,; E=2e-65 PFAM: PF02562; PhoH-like protein; E=1.8e-133 phoH-like protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL PHOH-LIKE PROTEIN	PhoH-like protein	PhoH-like protein	Putative phosphate starvation-induced protein	
ECOLI00634	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	2-methylthioadenine synthetase	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	(Dimethylallyl)adenosine tRNA methylthiotransferase miaB	
ECOLI00635	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	Putative uncharacterized protein	2-polyprenyl-6-methoxyphenol hydroxylase	Putative monooxygenase	putative 2-polyprenyl-6-methoxyphenol hydroxylase	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	VisC-related protein	Monooxygenase	Oxidoreductase, FAD-binding	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	VisC-related protein	Putative uncharacterized protein yleB	2-polyprenyl-6-methoxyphenol hydroxylase	Residues 3 to 393 of 393 are 98 pct identical to residues 1 to 391 of a 391 aa protein from Escherichia coli O157:H7 ref: NP_308727.1 oxygenase	Putative 2-octaprenyl-3-methyl-6-methoxy-1,4- benzoquinol hydroxylase	YleB protein	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase UbiF	Monooxygenase	Monooxygenase	IPR000205: NAD-binding site; IPR000689: UbiH/COQ6 monooxygenase; IPR003042: Aromatic-ring hydroxylase putative monooxygenase	similar to Salmonella typhi Ty2 putative monooxygenase putative monooxygenase	Putative 2-octaprenyl-3-methyl-6-methoxy-1,4- benzoquinol hydr...	Monooxygenase, FAD-binding	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	Putative monooxygenase	identified by similarity to SP:P75728; match to protein family HMM PF01360; match to protein family HMM TIGR01988 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	Putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	Code: HC; COG: COG0654 conserved hypothetical protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10802164; Product type e : enzyme 2-octoprenyl-3-methyl-6-methoxy-1, 4-benzoquinone hydroxylase	
ECOLI00636	Asparagine synthetase B	asparagine synthetase 2;	highly similar to sp|P49090 Saccharomyces cerevisiae YGR124w ASN2 asparagine synthetase, start by similarity	Probable asparagine synthetase [glutamine- hydrolyzing] [Source:GeneDB_Spombe;Acc:SPBC119.10]	highly similar to sp|P49089 Saccharomyces cerevisiae YPR145w ASN1 asparagine synthetase, start by similarity	Asparagine synthetase	Asparagine synthase B	Asparagine synthase	Asparagine synthase B	highly similar to uniprot|P49090 Saccharomyces cerevisiae YGR124w asparagine synthetase or uniprot|P49089 Saccharomyces cerevisiae YPR145w ASN1;	DEHA2B09680p;highly similar to uniprot|P49089 Saccharomyces cerevisiae YPR145W ASN1 Asparagine synthetase isozyme of Asn2p;	Asparagine synthetase	Asparagine synthase	480aa long hypothetical asparagine synthetase	Asparagine synthetase B, glutamine-hydrolyzing	Asparagine synthetase	Asparagine synthase	Asparagine synthetase	Asparagine synthase	Asparagine synthetase B	Glutamine-hydrolyzing asparagine synthetase B	Putative asparagine synthetase B	putative asparagine synthetase B, glutamine-hydrolyzing	Asparagine synthetase B	Asparagine synthase	Asparagine synthetase B, glutamine-hydrolyzing	go_component: cytoplasm [goid 0005737]; go_function: asparagine synthase (glutamine-hydrolyzing) activity [goid 0004066]; go_process: asparagine biosynthesis [goid 0006529] asparagine synthase (glutamine-hydrolyzing), putative	Asparagine synthetase B, glutamine-hydrolyzing	
ECOLI00636	Asparagine synthetase B	asparagine synthetase 2;	highly similar to sp|P49090 Saccharomyces cerevisiae YGR124w ASN2 asparagine synthetase, start by similarity	Probable asparagine synthetase [glutamine- hydrolyzing] [Source:GeneDB_Spombe;Acc:SPBC119.10]	highly similar to sp|P49089 Saccharomyces cerevisiae YPR145w ASN1 asparagine synthetase, start by similarity	Asparagine synthetase	Asparagine synthase B	Asparagine synthase	Asparagine synthase B	highly similar to uniprot|P49090 Saccharomyces cerevisiae YGR124w asparagine synthetase or uniprot|P49089 Saccharomyces cerevisiae YPR145w ASN1;	DEHA2B09680p;highly similar to uniprot|P49089 Saccharomyces cerevisiae YPR145W ASN1 Asparagine synthetase isozyme of Asn2p;	Asparagine synthetase	Asparagine synthase	480aa long hypothetical asparagine synthetase	Asparagine synthetase B, glutamine-hydrolyzing	Asparagine synthetase	Asparagine synthase	Asparagine synthetase	Asparagine synthase	Asparagine synthetase B	Glutamine-hydrolyzing asparagine synthetase B	Putative asparagine synthetase B	putative asparagine synthetase B, glutamine-hydrolyzing	Asparagine synthetase B	Asparagine synthase	Asparagine synthetase B, glutamine-hydrolyzing	go_component: cytoplasm [goid 0005737]; go_function: asparagine synthase (glutamine-hydrolyzing) activity [goid 0004066]; go_process: asparagine biosynthesis [goid 0006529] asparagine synthase (glutamine-hydrolyzing), putative	Asparagine synthetase B, glutamine-hydrolyzing	
ECOLI00637	Protein nagD	Alkaline phosphatase specific for p-nitrophenyl phosphate, involved in dephosphorylation of histone II-A and casein. [Source:SGD;Acc:S000002395]	similar to DEHA0C11924g Debaryomyces hansenii IPF 1642.1, start by similarity	Blr1894 protein	4-nitrophenylphosphatase	Phosphatase, putative	highly similar to uniprot|P19881 Saccharomyces cerevisiae YDL236w PHO13;	DEHA2G21802p;similar to uniprot|P19881 Saccharomyces cerevisiae YDL236W PHO13 Alkaline phosphatase specific for p- nitrophenyl phosphate;	Putative N-acetyl-glucosamine catabolism protein	hypothetical protein	Hydrolase, haloacid dehalogenase family	Putative HAD-superfamily hydrolase, subfamily IIA	NagD protein	Lmo2401 protein	Predicted sugar phosphatases of the HAD superfamily	NagD protein	Hydrolase, haloacid dehalogenase-like family	NagD protein	PMID: 97000351 PMID: 99411980 PMID: 2668691 PMID: 2190615 best DB hits: BLAST: embl:CAB65573.1; (AL136058) probable; E=1e-51 ddbj:BAB07147.1; (AP001518) p-nitrophenyl phosphatase [Bacillus; E=4e-43 swissprot:P15302; NAGD_ECOLI NAGD PROTEIN ----- pir: B64802; E=6e-42 COG: BH3428; COG0647 Predicted sugar phosphatases of the HAD superfamily; E=4e-44 VNG0719G; COG0647 Predicted sugar phosphatases of the HAD; E=7e-31 BH1074; COG0647 Predicted sugar phosphatases of the HAD superfamily; E=2e-24 PFAM: PF00702; haloacid dehalogenase-like hydr; E=2.9e-14 N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase	Putative N-acetylglucosamine metabolism protein	Putative uncharacterized protein	Predicted sugar phosphatase/hydrolase	Putative phosphatases involved in N-acetyl- glucosamine catabolism	Putative N-acetylglucosamine related protein	Protein nagD	CDS_ID OB2360 N-acetyl-glucosamine catabolism	similar to AX065037-1|CAC25758.1| percent identity: 88 in 272 aa conserved hypothetical protein	Putative uncharacterized protein	N-acetylglucosamine metabolism protein	
ECOLI00638	N-acetylglucosamine repressor	NagC	N-acetylglucosamine repressor	Putative xylose repressor	putative N-acetylglucosamine repressor	Xylose operon regulatory protein	N-acetylglucosamine repressor	N-acetylglucosamine repressor	glimmer prediction; ROK family; similar to several Streptomyces coelicolor putative trancriptional regulators, e.g. CAA19624, as well as to the xylose operon repressor XylR from Bacillus subtilis (P16557). Similar to Smc02017 of S. meliloti chromosome putative ROK family transcriptional regulator	N-acetylglucosamine repressor	N-acetylglucosamine repressor	Transcriptional repressor of the xylose operon	Transcriptional regulator	Lin0217 protein	Residues 1 to 406 of 406 are 100 pct identical to residues 1 to 406 of a 406 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286390.1 transcriptional repressor of nag (N-acetylglucosamine) operon	Putative N-acetylglucosamine regulatory protein	N-acetylglucosamine repressor	transcriptional repressor of the xylose operon	IPR000600: ROK family transcriptional repressor of nag (N-acetylglucosamine) operon (NagC/XylR family)	similar to Salmonella typhi CT18 N-acetylglucosamine repressor N-acetylglucosamine repressor	Putative N-acetylglucosamine regulatory protein	N-acetylglucosamine repressor	Similar to Anaerocellum thermophilum xylose repressor XylR SWALL:XYLR_ANATH (SWALL:Q44406) (399 aa) fasta scores: E(): 3.6e-32, 33.17% id in 407 aa, and to Bacteroides thetaiotaomicron putative xylose repressor BT0433 SWALL:AAO75540 (EMBL:AE016927) (402 aa) fasta scores: E(): 2.7e-135, 87.78% id in 401 aa, and to Bacillus halodurans transcriptional repressor of the xylose operon BH1094 SWALL:Q9KDW7 (EMBL:AP001510) (407 aa) fasta scores: E(): 1.7e-31, 28.6% id in 388 aa putative ROK family transcriptional repressor protein	Transcriptional repressor of nag (N- acetylglucosamine) operon	putative transcriptional repressor protein	Code: KG; COG: COG1940 transcriptional repressor of nag (N-acetylglucosamine) operon	transcriptional repressor of N-acetylglucosamine operon; Code: KG; COG: COG1940 transcriptional repressor of nag operon	N-acetylglucosamine repressor	transcriptional repressor of nag operon; Code: KG; COG: COG1940 transcriptional repressor of N-acetylglucosamine operon	
ECOLI00639	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	NagA	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	N-acetyl-glucosamine-6-phosphate deacetylase	putative N-acetylglucosamine-6-phosphatedeacetylase	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	similar to GB:X56652, GB:L05921, GB:M10906, GB:M23698, GB:X51443, SP:P02735, PID:36308, PID:36317, PID:758679, PID:758681, PID:758683, PID:825714, PID:825715, PID:825716, PID:825717, and PID:939926; identified by sequence similarity; putative N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	conserved hypothetical protein	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE PROTEIN	N-acetyl-glucosamine-6-phosphate deacetylase	N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	Residues 1 to 382 of 382 are 99 pct identical to residues 1 to 382 of a 382 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286391.1 N-acetylglucosamine-6-phosphate deacetylase	Putative N-acetylglucosamine-6-phosphate deacetylase	N-acetylglucosamine-6-phosphate deacetylase	
ECOLI00640	Glucosamine-6-phosphate deaminase	similar to tr|Q9C1S8 Candida albicans CaNAG1 protein, start by similarity	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	DEHA2F24596p;highly similar to uniprot|Q04802 Candida albicans NAG1 Glucosamine-6-phosphate isomerase;	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	identified by match to protein family HMM PF01182; match to protein family HMM TIGR00502 glucosamine-6-phosphate isomerase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate isomerase, putative	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate isomerase	PMID: 7683645 PMID: 3284790 best DB hits: BLAST: swissprot:O31458; YBFT_BACSU HYPOTHETICAL 27.3 KD PROTEIN IN; E=2e-55 ddbj:BAB04139.1; (AP001508) N-acetylglucosamine-6-phosphate; E=4e-54 swissprot:O35000; NAGB_BACSU GLUCOSAMINE-6-PHOSPHATE ISOMERASE; E=8e-53 COG: BS_ybfT; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate; E=2e-56 PFAM: PF01182; Glucosamine-6-phosphate isome; E=7.9e-96 glucosamine-6-phosphate isomerase	Glucosamine-6-phosphate deaminase	Glucosamine-6-phosphate deaminase	N-acetylglucosamine-6-phosphate isomerase	
ECOLI00641	PTS system N-acetylglucosamine-specific EIICBA component	N-Acetyl-D-Glucosamine phosphotransferase system transporter	PTS system, N-acetylglucosamine-specific IIABC component	Pts system, N-acetylglucosamine-specific IIABC component	Putative PTS system, N-acetylglucosamine-specific IIBC component	PTS system, N-acetylglucosamine-specific IIBC component	PTS system, N-acetylglucosamine-specific EIIBC component	putative phosphotransferase system IIC components, N-acetylglucosamine-specific IIABC component	PTS system, N-acetylglucosamine-specific IIABC component	identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826 PTS system, N-acetylglucosamine-specific IIBC component, putative	PTS system N-acetylglucosamine-specific enzyme IIABC component	PTS system enzyme IIABC component	PTS system, N-acetylglucosamine-specific enzyme IIABC	PTS SYSTEM, N-ACETYLGLUCOSAMINE-SPECIFIC IIABC COMPONENT	Phosphotransferase system IIC component, possibly N-acetylglucosamine-specific	Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific	Phosphotransferase system IIB component	Residues 1 to 648 of 648 are 99 pct identical to residues 1 to 648 of a 648 aa protein from Escherichia coli K12 ref: NP_415205.1 PTS system, N-acetylglucosamine-specific enzyme IIABC	PtsG	pts system, n-acetylglucosamine-specific enzyme II, ABC component	PTS system, N-acetylglucosamine-specific IIABC component	Protein-N p-phosphohistidine-sugar phosphotransferase	InterProMatches:IPR010974, IPR001996; Molecular Function: sugar porter activity (GO:0005351), Biological Process: transport (GO:0006810), Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401), Cellular Component: membrane (GO:0016020) phosphotransferase system (PTS) N-acetylglucosamine-specific enzyme IICB component	IPR001127: Sugar-specific permease, EIIA 1 domain; IPR001996: Phosphotransferase system PTS, EIIB domain Sugar Specific PTS family, n-acetylglucosamine-specific enzyme IIABC	similar to Salmonella typhi CT18 pts system, N-acetylglucosamine-specific IIABC component pts system, N-acetylglucosamine-specific IIABC component	Sugar Specific PTS family, n-acetylglucosamine- specific enzyme IIABC	PTS system, N-acetylglucosamine-specific EIIBC component	identified by sequence similarity; putative; ORF located using Blastx; COG1263; TC:4.A.1.1.2 putative PTS system, N-acetylglucosamine-specific II ABC component	identified by sequence similarity; putative; ORF located using Blastx; COG1263; TC:4.A.1.1.2 PTS system, N-acetylglucosamine-specific II ABC component	
ECOLI00642	Glutaminyl-tRNA synthetase	glutaminyl-tRNA synthetase;	Glutamine tRNA synthetase, monomeric class I tRNA synthetase that catalyzes the specific glutaminylation of tRNA(Glu); N-terminal domain proposed to be involved in enzyme-tRNA interactions. [Source:SGD;Acc:S000005694]	similar to sp|P13188 Saccharomyces cerevisiae Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS), start by similarity	Glutaminyl-tRNA synthetase	Probable glutaminyl-tRNA synthetase [Source:GeneDB_Spombe;Acc:SPBC342.02]	highly similar to sp|P13188 Saccharomyces cerevisiae YOR168w GLN4 glutaminyl-tRNA synthetase, start by similarity	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutaminyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutaminyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutaminyl-tRNA synthetase	GLUTAMINYL tRNA SYNTHETASE;10_1460, GLUTAMINYL tRNA SYNTHETASE, SYQ_LUPLU, gene found by Glimmer;	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutaminyl-tRNA synthetase	highly similar to uniprot|P13188 Saccharomyces cerevisiae YOR168w GLN4;	Glutamyl-tRNA synthetase	DEHA2F22836p;highly similar to uniprot|P13188 Saccharomyces cerevisiae YOR168W Glutaminyl-tRNA synthetase (EC 6.1.1.  18) (Glutamine--tRNA ligase) (GlnRS);	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutaminyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	
ECOLI00643	Uncharacterized protein ybfM	Putative outer membrane protein	Hypothetical protein ybfM	Porin D	Putative exported protein	Putative uncharacterized protein ybfM	Putative uncharacterized protein	Residues 1 to 468 of 468 are 99 pct identical to residues 1 to 468 of a 468 aa protein from Escherichia coli K12 ref: NP_415207.1 orf, conserved hypothetical protein	Putative exported protein	putative outer membrane protein	similar to Salmonella typhi CT18 putative outer membrane protein putative outer membrane protein	Possible outermembrane porin	Putative outer membrane protein	identified by match to protein family HMM PF03573 porin D	identified by match to protein family HMM PF03573 outer membrane porin OprE	conserved hypothetical protein	outer membrane porin	Probable outer membrane protein YbfM	Hypothetical protein precursor	Putative uncharacterized protein ybfM	Hypothetical protein precursor	putative outermembrane porin identified by match to protein family HMM PF03573	Putative exported protein precursor	Hypothetical protein	putative outer membrane porin, OprD family	Outer membrane protein OprE3 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10338201; Product type t : transporter	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	
ECOLI00644	Uncharacterized lipoprotein ybfN	Hypothetical lipoprotein ybfN	Putative uncharacterized protein ybfN	Residues 7 to 114 of 114 are 100 pct identical to residues 1 to 108 of a 108 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286397.1 orf, conserved hypothetical protein	putative lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	conserved hypothetical protein	conserved hypothetical protein	Hypothetical lipoprotein YbfN	Hypothetical lipoprotein YbfN	Putative lipoprotein precursor	conserved hypothetical protein	conserved hypothetical lipoprotein ybfN precursor	Conserved hypothetical lipoprotein YbfN precursor	Putative uncharacterized protein ybfN	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein precursor	Predicted lipoprotein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	YbfN	YbfN	
ECOLI00645	Ferric uptake regulation protein	Ferric uptake regulation protein Fur	Ferric uptake regulator	Ferric uptake regulation protein	Ferric uptake regulator Fur	Ferric uptake regulation protein	Transcriptional regulator	Transcriptional regulator, putative iron uptake regulation protein	Ferric uptake regulator family protein	Putative ferric uptake regulation protein	Probable metal uptake regulator similar to ferric uptake regulator protein	Transcriptional regulator	Ferric uptake regulator family	Ferric uptake regulator family	Probable transcription regulator	Transcriptional regulator, Fur family	Ferric uptake regulation protein	Ferric uptake regulation protein	Fur	Ferric uptake regulation protein	Ferric uptake regulation protein	Ferric uptake regulator	Fe2+/Zn2+ uptake regulation proteins	Ferric uptake regulator	Ferric uptake regulation protein	Cell wall-binding protein Fur	Transcriptional regulator, Fur family	Fur protein	Fe2+/Zn2+ uptake regulation proteins	
ECOLI00647	Flavodoxin-1	Flavodoxin	Flavodoxin	FldA	Flavodoxin	Flavodoxin 1	Flavodoxin	Flavodoxin	Flavodoxin	putative flavodoxin 1	Flavodoxin-1	identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753 flavodoxin	Flavodoxin	Flavodoxin 1	Flavodoxin	Flavodoxin 1	Flavodoxin	Flavodoxin	Putative flavodoxin	Flavodoxin 1	Flavodoxin-1	Putative flavodoxin	Flavodoxin	Flavodoxins	Residues 40 to 215 of 215 are 96 pct identical to residues 1 to 176 of a 176 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286399.1 flavodoxin 1	Flavodoxin 1	FldA protein	Flavodoxin 1	Flavodoxin	
ECOLI00648	Uncharacterized protein ybfE	Putative uncharacterized protein ybfE	Hypothetical protein ybfE	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein ybfE	Residues 1 to 97 of 97 are 100 pct identical to residues 24 to 120 of a 120 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286400.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YbfE of Escherichia coli	LexA regulated, putative SOS response	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	LexA regulated, putative SOS response	identified by similarity to OMNI:NTL01SF0579 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function; PubMedId : 10760155 conserved protein of unknown function ; putative LexA regulated, possible SOS response	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	CopG-like DNA-binding	CopG domain protein DNA-binding domain protein	Hypothetical protein	CopG domain protein DNA-binding domain protein	Putative uncharacterized protein ybfE	Hypothetical protein	conserved helix-turn-helix protein	
ECOLI00649	Esterase ybfF	Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies.  [Source:SGD;Acc:S000003263]	similar to tr|Q871P1 Neurospora crassa CAD70955 Hypothetical protein B11C21.140, start by similarity	Bll2527 protein	Putative esterase/lipase HI0193	weakly similar to uniprot|P53219 Saccharomyces cerevisiae YGR031w;	DEHA2C03762p;similar to CA2337|IPF13379 Candida albicans IPF13379;	Putative hydrolase	Putative uncharacterized protein	Putative esterase/lipase YbfF	Predicted hydrolase or acyltransferase, alpha/beta hydrolase superfamily	Putative hydrolase	Putative esterase/lipase YbfF	hypothetical esterase/lipase ybfF	Putative hydrolase	Putative esterase/lipase ybfF	Esterase/lipase YbfF, putative	go_component: mitochondrion [goid 0005739] mitochondrion protein, putative	Hydrolase, alpha/beta fold family	Putative hydrolase	Putative hydrolase	Putative esterase/lipase YbfF	Putative esterase/lipase YbfF	Putative uncharacterized protein ybfF	Alpha/beta hydrolase fold	Predicted hydrolase or acyltransferase	Alpha/beta hydrolase	Residues 1 to 254 of 254 are 98 pct identical to residues 1 to 254 of a 254 aa protein from Escherichia coli K12 ref: NP_415212.1 orf, conserved hypothetical protein	Predicted hydrolases or acyltransferases	
ECOLI00650	Protein seqA	SeqA	SeqA protein	SeqA protein	putative SeqA protein	Protein seqA	SeqA protein	SeqA protein	Putative negative regulator of replication initiation	SeqA protein	Negative modulator of initiation of replication	SeqA protein	Residues 19 to 199 of 199 are 100 pct identical to residues 1 to 181 of a 181 aa protein from Escherichia coli K12 ref: NP_415213.1 negative modulator of initiation of replication	Putative negative regulator of replication initiation	SeqA protein, negative modulator of initiation of replication	IPR005621: SeqA protein negative modulator of initiation of replication, inhibits open complex formation, mutation in gene alters cell membrane	similar to Salmonella typhi CT18 seqA protein seqA protein	Putative negative regulator of replication initiation	SeqA protein	Similar to: HI0192, SEQA_HAEIN SeqA	Negative regulator of replication initiationR SeqA protein	Negative regulator of replication initiation	Negative modulator of initiation of replication	identified by similarity to SP:P36658; match to protein family HMM PF03925 seqA protein	DNA replication inhibitor protein	Code: L; COG: COG3057 negative modulator of initiation of replication	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10972793, 11344144, 12622820, 12824161, 14704346; Product type r : regulator SeqA protein, recognizes hemimethylated GATC motifs; negative modulator of replication initiation; SeqA foci required for chromosome segregation	Code: L; COG: COG3057 negative modulator of initiation of replication	negative modulator of replication initiation SeqA	
ECOLI04255	Putative transposon gamma-delta 80.3 kDa protein	ATPase involved in DNA repair	Putative uncharacterized protein	ATPase involved in DNA repair, putative	hypothetical protein	hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolase domain Evidence 5 : No homology to any previously reported sequences	ATPase involved in DNA repair	Putative uncharacterized protein tnpX	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00651	Phosphoglucomutase	Phosphoglucomutase, minor isoform; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism.  [Source:SGD;Acc:S000001610]	Phosphoglucomutase	highly similar to sp|P37012 Saccharomyces cerevisiae YMR105c PGM2 phosphoglucomutase, major isoform, start by similarity	Phosphoglucomutase	highly similar to uniprot|P37012 Saccharomyces cerevisiae YMR105c PGM2 phosphoglucomutase;	Putative phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	putative phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase, alpha-D-glucose phosphate- specific	Phosphoglucomutase	Phosphoglucomutase, alpha-D-glucose phosphate- specific	Phosphoglucomutase	Phosphoglucomutase, alpha-D-glucose phosphate- specific	Putative phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	similar to AX064899-1|CAC25689.1| percent identity: 90 in 554 aa putative phosphoglucomutase	Phosphoglucomutase	Phosphoglucomutase	
ECOLI00652	Uncharacterized lipoprotein ybfP	Predicted protein	Putative lipoprotein	Putative pectinase precursor	Putative lipoprotein	Putative uncharacterized protein ybfP	Putative uncharacterized protein ybfP	YbfP protein	Predicted protein	Putative pectinase	
ECOLI00653	Putative uncharacterized protein ybfG	Putative uncharacterized protein	SCJ11.30c, unknown, len: 247 aa; similar to SW:YBFG_HAEIN hypothetical protein from Haemophilus influenzae (228 aa) fasta scores; opt: 374, z-score: 437.3, E(): 5.3e-17, (32.8% identity in 195 aa overlap).  Contains TTA leucine codon, possible target for bldA regulation. conserved hypothetical protein	Similar to: HI0374, YBFG_HAEIN conserved hypothetical protein	conserved hypothetical protein	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Histidyl-tRNA synthetase	Putative uncharacterized protein	YbfG protein	Putative uncharacterized protein	
ECOLI00653	Putative uncharacterized protein ybfG	Putative uncharacterized protein	SCJ11.30c, unknown, len: 247 aa; similar to SW:YBFG_HAEIN hypothetical protein from Haemophilus influenzae (228 aa) fasta scores; opt: 374, z-score: 437.3, E(): 5.3e-17, (32.8% identity in 195 aa overlap).  Contains TTA leucine codon, possible target for bldA regulation. conserved hypothetical protein	Similar to: HI0374, YBFG_HAEIN conserved hypothetical protein	conserved hypothetical protein	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Histidyl-tRNA synthetase	Putative uncharacterized protein	YbfG protein	Putative uncharacterized protein	
ECOLI00655	Putrescine-ornithine antiporter	Putrescine-ornithine antiporter	DEHA2D12078p;similar to uniprot|P38734 Saccharomyces cerevisiae YHL036W MUP3 Low affinity methionine permease;	PotE	Amino acid transporter	Putrescine-ornithine antiporter	Putrescine-ornithine antiporter	Putrescine-ornithine antiporter	Putrescine-ornithine antiporter	glimmer prediction excellent match (e-132) to E.  coli potE transport protein over entire length, also matches cadaverine/lysine, arginine/ornithine transport proteins putrescine/ornithine antiport transport protein, probable	Putrescine transport protein	Putrescine transport protein	Amino acid transporter	Residues 1 to 439 of 439 are 99 pct identical to residues 1 to 439 of a 439 aa protein from Escherichia coli K12 ref: NP_415219.1 putrescine transport protein	Amino acid permease	IPR002293: Amino acid/polyamine transporter, family I APC family, putrescine/ornithine antiporter	similar to Salmonella typhi CT18 putrescine-ornithine antiporter putrescine-ornithine antiporter	APC family, putrescine/ornithine antiporter	Code: E; COG: COG0531 putrescine transport protein	Amino acid permease-associated region	Putrescine-ornithine antiporter	Amino acid permease-associated region	Amino acid permease-associated region	Putrescine transport protein	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: aba:Acid345_3333 amino acid transporter	Putrescine-ornithine antiporter	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: bcn:Bcen_4355 amino acid permease-associated region	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: son:SO0313 putrescine-ornithine antiporter	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: mmc:Mmcs_2253 amino acid permease-associated region	
ECOLI00656	Ornithine decarboxylase, inducible	Ornithine decarboxylase, inducible	Ornithine decarboxylase isozyme, inducible	similar to Escherichia coli K12 ornithine decarboxylase isozyme, inducible gi: 1786909 (733 aa).  BLAST with identity of 95% in 688 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	IPR000310: Orn/Lys/Arg decarboxylase, major region ornithine decarboxylase isozyme, inducible	similar to Salmonella typhimurium ornithine decarboxylase isozyme, inducible ornithine decarboxylase isozyme, inducible	Ornithine decarboxylase isozyme, inducible	Code: E; COG: COG1982 ornithine decarboxylase isozyme, inducible	Code: E; COG: COG1982 ornithine decarboxylase isozyme, inducible	Ornithine decarboxylase, inducible	Ornithine decarboxylase, inducible	Ornithine decarboxylase, inducible	Ornithine decarboxylase, constitutive	ornithine decarboxylase, inducible	Ornithine decarboxylase	Putative uncharacterized protein	Ornithine decarboxylase, inducible	Ornithine decarboxylase isozyme, inducible	Ornithine decarboxylase	Ornithine decarboxylase, inducible	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Ornithine decarboxylase isozyme, inducible	Ornithine decarboxylase, inducible	Ornithine decarboxylase, inducible	Ornithine decarboxylase, inducible	Ornithine decarboxylase, inducible	Ornithine decarboxylase, inducible	
ECOLI00657	Uncharacterized protein ybfK	Putative uncharacterized protein	Putative uncharacterized protein ybfK	Putative uncharacterized protein	
ECOLI00658	KDP operon transcriptional regulatory protein kdpE	Two-component system, regulatory protein KdpE	KDP operon transcriptional Regulatory protein kdpE	Two component system transcriptional regulatory protein	Two component system transcriptional regulatory protein	Two-component response regulator of kdp operon	Two component system transcriptional regulatory protein	DNA-binding response regulator KdpE	Regulator of kdp operon	Two-component regulatory protein response regulator KdpE	Probable response regulator transcription regulator protein	Transcriptional regulatory protein of kdp operon	Kdp operon transcriptional regulatory protein kdpE	KdpE	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response regulator in two-component regulatory system with KdpD, regulates kdp operon encoding a high-affinity K translocating ATPase (OmpR family)	similar to Salmonella typhi CT18 KDP operon transcriptional regulatory protein KDP operon transcriptional regulatory protein	Two-component regulatory protein response regulator KdpE	DNA binding response regulator KdpE	Response regulator in two-component regulatory system with KdpD	DNA binding response regulator	identified by similarity to SP:P21866; match to protein family HMM PF00072; match to protein family HMM PF00486 KDP operon transcriptional regulatory protein KdpE	Response regulator receiver:Transcriptional regulatory protein, C-terminal	Response regulator receiver:Transcriptional regulatory protein, C-terminal	transcriptional effector; Code: TK; COG: COG0745 regulator of kdp operon	DNA-binding response regulator	transcriptional effector; Code: TK; COG: COG0745 regulator of kdp operon	two component response regulator	KDP operon transcriptional regulatory protein	two component transcriptional regulator, winged helix family	
ECOLI00659	Sensor protein kdpD	Sensor protein	Sensor protein	Sensor protein	Truncated KdpD protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein kdpD	Sensor protein	Sensor protein	Sensor protein	glimmer prediction; very similar to sensor protein KdpD (regulating potassium transport) in E. coli, P21865; carboxyl terminal contains histidine kinase domain probable sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	two-component sensor KdpD	Sensor protein	SC2E9.12, kdpD, two-component sensor/protein kinase, len: 848 aa; similar to Escherichia coli turgor pressure sensor KDPD_ECOLI P21865 sensor protein kdpD (ec 2.7.3.-) (894 aa), fasta scores; opt: 997 z-score: 1347.4 E(): 0, 34.8% identity in 877 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and Pfam match to entry signal PF00512, Signal C terminal domain, score 184.57. Contains possible hydrophobic membrane spanning regions putative turgor pressure sensor	Sensor protein	Sensor protein	Sensor protein	identified by similarity to EGAD:18674; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF02702 sensor histidine kinase KdpD	Sensor protein	Sensor protein	Sensor protein kdpD	
ECOLI00660	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	EF0089	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	pseudo	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	identified by match to protein family HMM PF02669; match to protein family HMM TIGR00681 potassium-transporting ATPase, C subunit	K+-transporting ATPase, C subunit	Potassium-transporting ATPase C chain	Potassium-transporting ATPase C chain	
ECOLI00661	Potassium-transporting ATPase B chain	Potassium-transporting ATPase, B subunit	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Putative high-affinity potassium transport system	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Putative potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Potassium-transporting ATPase b chain	Potassium-transporting ATPase B chain	K+-transporting ATPase, B subunit	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	glimmer prediction; very similar to potassium-transporting ATPase B chain, KdpB, from E. coli, P03960; E1-E2 ATPase family probable KdpB potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	Putative potassium transporter B subunit	Cation-transporting ATPase	Potassium-transporting ATPase B chain	Potassium-transporting ATPase B chain	potassium-transporting atpase b chain, KdpB	Potassium-transporting atpase b chain, KdpB	
ECOLI00662	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	EF0087	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	glimmer prediction; very similar to potassium-transporting ATPase A chain, KdpA, from E. coli probable KdpA potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	Potassium-transporting ATPase A chain	potassium-transporting ATPase, A chain, KdpA	Potassium-transporting ATPase A chain	

ECOLI00664	Uncharacterized protein ybfA	Hypothetical protein ybfA	Putative membrane protein	Uncharacterized protein ybfA	Residues 1 to 68 of 68 are 100 pct identical to residues 1 to 68 of a 68 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286412.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to unknown protein YbfA of Escherichia coli	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative membrane protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein ybfA	Membrane protein	conserved hypothetical protein identified by similarity to GB:CAH22153.1	Putative membrane protein	Hypothetical protein	conserved hypothetical protein	Membrane protein	Putative periplasmic protein	Putative uncharacterized protein ybfA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative membrane protein	
ECOLI00665	Protein rhsC	RHS-related protein	Putative uncharacterized protein	Similar to Rhs-family protein	Rhs family protein	rhsD protein identified by match to protein family HMM PF05593; match to protein family HMM TIGR01643	Hypothetical protein	YD repeat protein TIGRFAM: YD repeat protein PFAM: RHS protein; YD repeat-containing protein KEGG: bcn:Bcen_2647 YD repeat	putative Rhs-family protein Code: M; COG: COG3209	YD repeat protein	RhsC element core protein RhsC	RhsC protein	YD repeat protein precursor	Putative uncharacterized protein	YD repeat protein	RHS-family protein Similar to Escherichia coli RhsB protein precursor rhsB SWALL:RHSB_ECOLI (SWALL:P16917) (1411 aa) fasta scores: E(): 1.7e-36, 28.13% id in 1276 aa; homology does not extend to the C terminus Similar to Pseudomonas putida rhs-related protein SWALL:Q88I91 (EMBL:AE016785) (1385 aa) fasta scores: E(): 2e-149, 43.97% id in 1312 aa; homology does not extend to the C terminus	YD repeat protein	RhsC element core protein RshC	hypothetical protein	Putative uncharacterized protein	
ECOLI00666	Uncharacterized protein ybfB	Predicted inner membrane protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ybfB	YbfB protein	Predicted inner membrane protein	Predicted inner membrane protein	Putative membrane protein	
ECOLI00667	Putative uncharacterized protein ybfO	Putative RHS domain protein	Conserved protein, rhs-like protein	RHS repeat protein	RHS protein precursor	RhsG core protein with extension	Putative truncated Rhs core protein	Putative uncharacterized protein ybfO	Putative uncharacterized protein ybfO	YbfO protein	RhsG core protein	
ECOLI00668	Uncharacterized protein ybfC	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ybfC	Putative uncharacterized protein ybfC	YbfC protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI00669	Putative defective transposase ybfQ	hypothetical protein	H repeat-associated protein of Rhs element	Hypothetical protein	hypothetical protein KEGG: son:SO2129 transposase, putative	Putative uncharacterized protein	KEGG: ppr:PBPRB1399 hypothetical protein hypothetical protein	ISEc2, transposase	Predicted transposase	ISEc2, transposase	Putative uncharacterized protein	pseudo	Putative H-repeat associated protein	pseudo	Partial H repeat-associated protein of Rhs element	Predicted transposase	
ECOLI00670	Putative protein ybfL	
ECOLI00671	H repeat-associated protein ybfD	H repeat-associated protein of Rhs element	Transposase	ISMca6, transposase, OrfA	putative transposase, fragment (IS4)	transposase, IS4	Transposase	transposase, IS4 family protein PFAM: transposase, IS4 family protein KEGG: rpc:RPC_2070 transposase, IS4	Transposase	Transposase	Transposase, putative	Conserved protein	ISEc4, transposase	Transposase	Transposase	Putative transposase-IS1548	pseudo	YbfD protein	Conserved protein	Putative uncharacterized protein	pseudo RhsC, IS677, putative H repeat-associated protein, central part	Putative uncharacterized protein ybfD	
ECOLI00672	Uncharacterized protein ybgA	Putative uncharacterized protein ybgA	Residues 1 to 169 of 169 are 98 pct identical to residues 1 to 169 of a 169 aa protein from Escherichia coli K12 ref: NP_415235.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Code: S; COG: COG3272 conserved hypothetical protein	Code: S; COG: COG3272 conserved hypothetical protein	Code: S; COG: COG3272; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ybgA	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG3272	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00673	Deoxyribodipyrimidine photo-lyase	similar to sp|P05066 Saccharomyces cerevisiae YOR386w PHR1 deoxyribodipyrimidine photo-lyase singleton, hypothetical start	Deoxyribodipyrimidine photo-lyase	Photolyase-like protein	DEHA2A00594p;similar to uniprot|P05066 Saccharomyces cerevisiae YOR386W PHR1 DNA photolyase involved in photoreactivation;	Putative deoxyribodipyrimidine photolyase	Probable deoxyribodipyrimidine photolyase	Deoxyribodipyrimidine photolyase	Deoxyribodipyrimidine photolyase-classI	Deoxyribodipyrimidine photolyase	Deoxyribodipyrimidine photolyase	Deoxyribodipyrimidine photo-lyase	DNA photolyase	Deoxyribodipyrimidine photolyase	Deoxyribopyrimidine photolyase	Deoxyribodipyrimidine photolyase family protein	Lmo0588 protein	Deoxyribodipyrimidine photolyase	Deoxyribodipyrimidine photolyase	Deoxyribodipyrimidine photolyase	Putative DNA photolyase	Deoxyribodipyrimidine photolyase-class I	Deoxyribodipyrimidine photo-lyase	deoxyribodipyrimidine photolyase	identified by match to protein family HMM PF00875; match to protein family HMM PF03441 deoxyribodipyrimidine photolyase family protein	Deoxyribodipyrimidine photo-lyase	Deoxyribodipyrimidine photolyase	Deoxyribodipyrimidine photolyase	Deoxyribodipyrimidine photolyase	
ECOLI00674	Inner membrane transporter ybgH	PTR2-family transport protein	Hypothetical transporter ybgH	Putative transport protein	Residues 1 to 493 of 493 are 99 pct identical to residues 1 to 493 of a 493 aa protein from Escherichia coli K12 ref: NP_415237.1 putative transport protein	IPR000109: TGF-beta receptor, type I/II extracellular region; IPR007114: Major facilitator superfamily putative POT family transport protein	similar to Salmonella typhi CT18 PTR2-family transport protein PTR2-family transport protein	di-/tripeptide transporter	Putative POT family transport protein	Code: E; COG: COG3104 putative transport protein	Code: E; COG: COG3104 putative transport protein	Putative POT family transport protein YbgH	Hypothetical transporter YbgH	putative transport protein Code: E; COG: COG3104	conserved hypothetical protein	Proton/peptide symporter	Putative transport protein	Putative uncharacterized protein	Amino acid/peptide transporter	Predicted transporter	Amino acid/peptide transporter	Amino acid/peptide transporter	Amino acid/peptide transporter	Putative uncharacterized protein	Putative uncharacterized protein	Amino acid/peptide transporter	PTR2-family transport protein	Inner membrane transporter YbgH	Inner membrane transporter YbgH	
ECOLI00675	UPF0135 protein ybgI	Putative uncharacterized protein	UPF0135 protein AF_1777	UPF0135 protein HI0105	Hypothetical UPF0135 protein Vng1766c	UPF0135 protein PH0627	identified by match to TIGR protein family HMM TIGR00486 hypothetical protein	UPF0135 protein PYRAB14240	Putative uncharacterized protein PF1065	UPF0135 protein CPE2004	UPF0135 protein NMB2054	UPF0135 protein PM0183	UPF0135 protein PA4445	Putative uncharacterized protein VV1026	UPF0135 protein DR_0110	Putative uncharacterized protein	UPF0135 protein ybgI	UPF0135 protein alr3216	Putative uncharacterized protein	SMS protein	Putative uncharacterized protein	Conserved hypothetical protein	UPF0135 protein BB_0468	UPF0135 protein CPn_0137/CP_0635/CPj0137/CpB0138	UPF0135 protein ybgI	NIF3 NGG1p interacting factor 3	Putative uncharacterized protein	UPF0135 protein VC_2093	Putative uncharacterized protein	
ECOLI00676	Uncharacterized protein ybgJ	Uncharacterized protein HI1731	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein STY0752	Putative uncharacterized protein ML2549	Putative uncharacterized protein	Hypothetical protein ybgJ	Putative uncharacterized protein	Putative allophanate hydrolase subunit 1	Putative uncharacterized protein	Allophanate hydrolase subunit 1	Uncharacterized protein ybgJ	SCF51A.20, unknown, len: 252 aa. Similar to a number of hypothetical proteins e.g. Escherichia coli SW:YBGJ_ECOLI (EMBL; AE000174) hypothetical 23.9 KD protein in phrB-nei intergenic region (218 aa), fasta scores: opt: 477 z-score: 492.1 E(): 4.7e-20 43.5% identity in 214 aa overlap conserved hypothetical protein	Residues 1 to 218 of 218 are 98 pct identical to residues 1 to 218 of a 218 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286426.1 putative carboxylase	pseudo	Similar to urea amidolyase	Putative allophanate hydrolase subunit 1 protein	Probable carboxylase	Putative uncharacterized protein	Putative uncharacterized protein	Mb0270c, -, len: 210 aa. Equivalent to Rv0264c, len: 210 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 210 aa overlap). Conserved hypothetical protein, equivalent to CAC32080.1|AL583926 conserved hypothetical protein from Mycobacterium leprae (222 aa). Also similar to others hypothetical proteins e.g. AL121596|SC51A_20 from Streptomyces coelicolor (252 aa), FASTA scores: opt: 420, E(): 2.7e-20, (41.7% identity in 204 aa overlap); P75744|YBGJ_ECOLI HYPOTHETICAL 23.9 KD PROTEIN from Escherichia coli (218 aa), FASTA scores: E(): 2.1e-14, (35.7% identity in 182 aa overlap); YH31_HAEIN|P44299|hi173 hypothetical protein from Haemophilus influenzae (213 aa), FASTA scores: opt: 252, E(): 8.3e-10, (31.1% identity in 183 aa overlap). CONSERVED HYPOTHETICAL PROTEIN	putative carboxylase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	hypothetical protein, similar to urea amidolyase	Putative carboxylase	Hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0770 conserved hypothetical protein	hypothetical protein, similar to urea amidolyase	
ECOLI00677	Uncharacterized protein ybgK	Putative antagonist of KipI	Urea amidolyase	Putative allophanate hydrolase subunit 2	Putative uncharacterized protein STY0753	Putative uncharacterized protein ML2550	Putative uncharacterized protein	Hypothetical protein ybgK	Putative uncharacterized protein	Putative uncharacterized protein	Putative allophanate hydrolase subunit 2	Putative uncharacterized protein	hypothetical conserved protein	Allophanate hydrolase, subunit 2	Allophanate hydrolase subunit 2	Putative carboxylase	Urea amidolyase-related	similar to Escherichia coli K12 putative carboxylase gi: 1786930 (311 aa). BLAST with identity of 97% in 310 aa. This CDS contains an in-frame stop codon.  The sequence has been checked and is believed to be correct. pseudo	Putative uncharacterized protein	Putative allophanate hydrolase subunit 2 protein	identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724 urea amidolyase-related protein	urea amidolyase, homolog	Hypothetical protein	identified by similarity to OMNI:NTL01OI2676; match to protein family HMM PF02626; match to protein family HMM TIGR00724 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Mb0269c, -, len: 300 aa. Equivalent to Rv0263c, len: 300 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 300 aa overlap). Conserved hypothetical protein, equivalent to NP_302634.1|NC_002677 conserved hypothetical protein from Mycobacterium leprae (305 aa). Also similar to others e.g. AL121596|SC51A_21 hypothetical protein from Streptomyces coelicolor (285 aa), FASTA scores: opt: 714, E(): 0, (45.3% identity in 289 aa overlap); NP_233164.1|NC_002506 conserved hypothetical protein from Vibrio cholerae (309 aa); NP_406216.1|NC_003143 conserved hypothetical protein from Yersinia pestis (316 aa); YH30_HAEIN|P44298|hi1730 hypothetical protein from Haemophilus influenzae (309 aa), FASTA scores: opt: 430, E(): 3e-20, (29.6% identity in 284 aa overlap); etc. Also similar to carboxylases eg NP_415240.1|NC_000913|P75745|YBGK_ECOLI putative carboxylase from Escherichia coli strain K12 (310 aa), FASTA score: (34.6% identity in 286 aa overlap); NP_459698.1|NC_003197 putative carboxylase from Salmonella typhimurium (310 aa); and to middle part of NP_420636.1|NC_002696 urea amidolyase-related protein from Caulobacter crescentus (1207 aa). CONSERVED HYPOTHETICAL PROTEIN	InterProMatches:IPR010018; antagonist of KipI KipA	putative carboxylase	
ECOLI00678	UPF0271 protein ybgL	UPF0271 protein FN0439	UPF0271 protein HI1729	UPF0271 protein PH0986	UPF0271 protein PYRAB09930	UPF0271 protein PF1272	UPF0271 protein rni3	UPF0271 protein Cj1541	UPF0271 protein DR_A0284	UPF0271 protein TT_P0137	UPF0271 protein ybgL	UPF0271 protein BA_3095/GBAA_3095/BAS2880	UPF0271 protein BC_3066	UPF0271 protein BT9727_2847	UPF0271 protein BPSL0257	UPF0271 protein ybgL	identified by match to protein family HMM PF03746 conserved hypothetical protein	pseudo	Putative lactam utilization protein	UPF0271 protein STH2522	UPF0271 protein BPP4006	lactam utilization protein	UPF0271 protein BMA3309	UPF0271 protein ybgL	CDS_ID OB2677 lactam utilization protein	UPF0271 protein RPA2681	UPF0271 protein BH1821	UPF0271 protein TTE1608	Residues 1 to 244 of 244 are 97 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli K12 ref: NP_415241.1 putative lactam utilization protein	
ECOLI00680	Protein abrB	Putative uncharacterized protein	Putative membrane protein	Putative ammonia monooxygenase	AbrB protein	Putative uncharacterized protein VCA0629	Putative membrane protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSMEMBRANE PROTEIN	Membrane protein, putative	Putative membrane protein	Putative transport protein	similar to AL591789-170|CAC46677.1| percent identity: 30 in 369 aa conserved hypothetical protein	hypothetical protein	Putative uncharacterized protein	Residues 1 to 348 of 348 are 98 pct identical to residues 16 to 363 of a 363 aa protein from Escherichia coli K12 ref: NP_415243.1 putative transport protein	Putative uncharacterized protein	identified by match to protein family HMM PF05145 membrane protein, putative	Hypothetical protein	IPR002155: Thiolase putative transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR1745 putative membrane protein	conserved hypothetical protein	Putative transport protein	putative membrane protein	similar to unknown protein	identified by match to protein family HMM PF05145 abrB protein	identified by match to protein family HMM PF05145 ammonia monooxygenase family protein	Putative ammonia monooxygenase	
ECOLI00679	Endonuclease VIII	Endonuclease VIII	Endonuclease VIII	Endonuclease VIII	DNA glycosylase	DNA glycosylase	Endonuclease VIII	DNA glycosylase	SC7C7.15c, probable DNA glycosylase involved in DNA repair, len: 276 aa; similar to e.g. END8_ECOLI endonuclease VIII (EC 3.2.-.-) (263 aa), fasta scores; opt: 384 z-score: 449.2 E(): 8.7e-18, 34.5% identity in 278 aa overlap DNA glycosylase	Residues 1 to 263 of 263 are 98 pct identical to residues 1 to 263 of a 263 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286429.1 endonuclease VIII and DNA N-glycosylase with an AP lyase activity	DNA glycosylase	Putative DNA glycosylase Rv3297/MT3396	Mb3325, nei, len: 255 aa. Equivalent to Rv3297, len: 255 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 255 aa overlap). Probable nei, endonuclease VIII (EC 3.2.-.-), similar to others e.g.  O86820|END8_STRCO|NEI|SC7C7.15c from Streptomyces coelicolor (276 aa), FASTA scores: opt: 770, E(): 1.2e-42, (50.35% identity in 268 aa overlap); P50465|END8_ECOLI|NEI|B0714 from Escherichia coli strain K12 (262 aa), FASTA scores: opt: 310, E(): 6.3e-13, (28.1% identity in 267 aa overlap); AAG55037|NEI from Escherichia coli strain O157:H7 EDL933 (263 aa), FASTA scores: opt: 301, E(): 2.4e-12, (27.7% identity in 267 aa overlap); etc. BELONGS TO THE FPG FAMILY. PROBABLE ENDONUCLEASE VIII NEI	IPR000191: Formamidopyrimidine-DNA glycolase; IPR000214: Formamidopyrimidine-DNA glycolase, zinc-binding site endonuclease VIII removing oxidized pyrimidines may also remove oxidized purines in absence of MutY and Fpg	similar to Salmonella typhi CT18 endonuclease VIII, DNA N-glycosylase with an AP lyase activity endonuclease VIII, DNA N-glycosylase with an AP lyase activity	Endonuclease VIII	DNA glycosylase	Code: L; COG: COG0266 endonuclease VIII/DNA N-glycosylase with an AP lyase activity	Code: L; COG: COG0266 endonuclease VIII and DNA N-glycosylase with an AP lyase activity	Code: L; COG: COG0266 endonuclease VIII and DNA N-glycosylase with an AP lyase activity	DNA-formamidopyrimidine glycosylase	Endonuclease 8	DNA-formamidopyrimidine glycosylase	Endonuclease 8	DNA-formamidopyrimidine glycosylase PFAM: Formamidopyrimidine-DNA glycolase KEGG: aba:Acid345_0380 DNA-formamidopyrimidine glycosylase	Formamidopyrimidine-DNA glycolase	Formamidopyrimidine-DNA glycolase PFAM: Formamidopyrimidine-DNA glycolase KEGG: sco:SCO5760 DNA glycosylase	DNA-formamidopyrimidine glycosylase PFAM: Formamidopyrimidine-DNA glycolase KEGG: mpa:MAP3416 probable endonuclease VIII	endonuclease VIII Nei cytoplasmic protein involved in damage reversal. DNA N-glycosylase with an ap lyase activity. required for the repair of oxidative DNA damage (oxidized pyrimidines)	
ECOLI00681	Uncharacterized protein ybgO	Putative uncharacterized protein	Putative uncharacterized protein ybgO	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1786935 (363 aa). BLAST with identity of 96% in 369 aa. This CDS contains deletion. The sequence has been checked and is believed to be correct. pseudo	Putative exported protein	Putative exported protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical protein precursor	Hypothetical protein precursor	conserved hypothetical protein	Hypothetical protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein	Predicted fimbrial-like adhesin protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Fimbrial protein precursor	Fimbrial protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative fimbrial protein	Putative uncharacterized protein ybgO	Putative uncharacterized protein ybgO	Putative uncharacterized protein ybgO	YbgO protein	
ECOLI00682	Uncharacterized fimbrial chaperone ybgP	Putative chaperone	Residues 3 to 244 of 245 are 90 pct identical to residues 1 to 242 of a 242 aa protein from Escherichia coli K12 ref: NP_415245.1 putative chaperone	Putative fimbrial chaperone	IPR001829: Bacterial pili assembly chaperone putative fimbrial chaparone protein	similar to Salmonella typhi CT18 probable fimbrial chaperone protein probable fimbrial chaperone protein	Putative fimbrial chaperone	Putative fimbrial chaparone protein	Code: NU; COG: COG3121 putative chaperone	Code: NU; COG: COG3121 putative chaperone	Putative fimbrial chaperone precursor	Fimbrial chaperone precursor	Putative fimbrial chaperone	putative chaperone Code: NU; COG: COG3121	Fimbrial chaperone precursor	Probable pilin chaperone	Periplasmic pilus chaperone family protein	Predicted assembly protein	Pili assembly chaperone protein	Periplasmic pilus chaperone family protein	Pili assembly chaperone precursor	Putative uncharacterized protein	Pili assembly chaperone, N-terminal precursor	Pili assembly chaperone precursor	Periplasmic pilus chaperone family protein	Pili assembly chaperone protein	Probable fimbrial chaperone protein	Fimbrial chaperone protein	Pili assembly chaperone protein	
ECOLI00683	Uncharacterized outer membrane usher protein ybgQ	Residues 1 to 833 of 833 are 95 pct identical to residues 1 to 832 of a 832 aa protein from Escherichia coli dbj: BAA35382.1 Outer membrane usher protein PmfC precursor.	putative outer membrane protein Code: NU; COG: COG3188	Fimbrial usher family protein	Predicted outer membrane protein	Fimbrial usher family protein	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial usher family protein	Fimbrial usher protein	Putative fimbrial usher protein	Putative uncharacterized protein ybgQ	Putative uncharacterized protein ybgQ	Putative uncharacterized protein ybgQ	YbgQ protein	Outer membrane usher protein	Predicted outer membrane protein	pseudo putative outer membrane usher protein, C-terminal part	Fimbrial biogenesis outer membrane usher protein	
ECOLI00684	Uncharacterized fimbrial-like protein ybgD	Putative fimbriae structural protein	Residues 1 to 188 of 188 are 78 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli K12 ref: NP_415247.1 putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	fimbrial protein identified by match to protein family HMM PF00419	putative fimbrial-like protein Code: NU; COG: COG3539	Putative type 1 fimbrial protein	Predicted fimbrial-like adhesin protein	Putative type 1 fimbrial protein	Fimbrial protein precursor	Probable fimbrial protein	Probable fimbrial protein	Probable fimbrial protein	Fimbrial protein	Putative fimbrial protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	Predicted fimbrial-like adhesin protein	Predicted fimbrial-like adhesin protein	putative fimbrial-like protein	Fimbrial protein	
ECOLI00685	Citrate synthase	Citrate synthase	similar to sp|P43635 Saccharomyces cerevisiae YPR001w CIT3 citrate (si)-synthase, mitochondrial, start by similarity	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	hypothetical citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	similar to SP:O33915, and SP:P00891; identified by sequence similarity; putative citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	Citrate synthase	
ECOLI00686	Succinate dehydrogenase cytochrome b556 subunit	Succinate dehydrogenase, cytochrome b556 subunit	Succinate dehydrogenase	Succinate dehydrogenase, cytochrome b556 subunit	Succinate dehydrogenase cytochrome B-556 subunit	Succinate dehydrogenase cytochrome b556 subunit	Putative succinate dehydrogenase cytochrome b-556 subunit	putative succinate dehydrogenase; fumaratereductase, cytochrome b subunit	Succinate dehydrogenase cytochrome b-556 subunit	similar to GB:X63597, GB:M22616, SP:P14410, PID:338090, and PID:36645; identified by sequence similarity; putative succinate dehydrogenase, cytochrome b556 subunit	Succinate dehydrogenase, cytochrome b556 subunit	Succinate dehydrogenase cytochrome B subunit	Succinate dehydrogenase cytochrome B subunit	Succinate dehydrogenase, cytochrome b556 subunit	Succinate dehydrogenase cytochrome b-556 subunit	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE SUCCINATE DEHYDROGENASE CYTOCHROME B-556 SUBUNIT TRANSMEMBRANE PROTEIN	Succinate dehydrogenase, cytochrome b556 subunit	Succinate dehydrogenase cytochrome B subunit	Succinate dehydrogenase, cytochrome b556 subunit	SUCCINATE DEHYDROGENASE CYTOCHROME B-556 SUBUNIT	Succinate dehydrogenase, cytochrome b556 subunit	Succinate dehydrogenase cytochrome b556 subunit	succinate dehydrogenase membrane anchor subunit	Succinate dehydrogenase cytochrome b556 subunit	Succinate dehydrogenase membrane anchor/cytochrome b subunit	Succinate dehydrogenase	Residues 6 to 134 of 134 are 99 pct identical to residues 1 to 129 of a 129 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286437.1 succinate dehydrogenase, cytochrome b556	Succinate dehydrogenase cytochrome b-556 subunit	Succinate dehydrogenase, cytochrome b subunit	
ECOLI00687	Succinate dehydrogenase hydrophobic membrane anchor subunit	Succinate dehydrogenase	Succinate dehydrogenase, hydrophobic anchor subunit	Succinate dehydrogenase hydrophobic membrane anchor protein	Putative succinate dehydrogenase	Putative succinate dehydrogenase, hydrophobic membrane anchor protein	Succinate dehydrogenase hydrophobic membrane anchor subunit	Succinate dehydrogenase, hydrophobic membrane anchor protein	Succinate dehydrogenase hydrophobic membrane anchor protein	Succinate dehydrogenase hydrophobic membrane anchor protein	Succinate dehydrogenase hydrophobic membrane anchor protein	Succinate dehydrogenase, hydrophobic membrane anchor protein	Succinate dehydrogenase hydrophobic membrane anchor protein	Succinate dehydrogenase, hydrophobic membrane anchor protein	Succinate dehydrogenase, hydrophobic membrane anchor protein	Succinate dehydrogenase hydrophobic membrane anchor subunit	Succinate dehydrogenase hydrophobic membrane anchor subunit	Succinate dehydrogenase, hydrophobic anchor subunit	Residues 1 to 115 of 115 are 100 pct identical to residues 1 to 115 of a 115 aa protein from Escherichia coli K12 ref: NP_415250.1 succinate dehydrogenase, hydrophobic subunit	Succinate dehydrogenase hydrophobic membrane anchor protein	Succinate dehydrogenase, cytochrome b subunit	SdhD protein	Putative transmembrane succinate dehydrogenase (Hydrophobic membrane anchor subunit) oxidoreductase protein	Succinate dehydrogenase hydrophobic membrane anchor subunit	succinate dehydrogenase, hydrophobic membrane anchor protein	conserved gene succinate dehydrogenase hydrophobic membrane anchor protein subunit D	succinate dehydrogenase, hydrophobic membrane anchor protein	Succinate dehydrogenase, hydrophobic subunit	Succinate dehydrogenase hydrophobic membrane anchor protein	
ECOLI00688	Succinate dehydrogenase flavoprotein subunit	similar to sp|P47052 Saccharomyces cerevisiae Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) and sp|Q00711 Saccharomyces cerevisiae YKL148c SDH1 succinate dehydrogenase flavoprotein precursor P2.302.f2.1, start by similarity	Succinate dehydrogenase flavoprotein subunit	Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC1556.02c]	gi|33386568|emb|CAD87728.1 Kluyveromyces lactis flavoprotein subunit of succinate dehydrogenase complex, hypothetical start	Succinate dehydrogenase subunit A	Succinate dehydrogenase flavoprotein subunit	flavoprotein subunit of succinate dehydrogenase	Succinate dehydrogenase flavoprotein subunit	Succinate dehydrogenase flavoprotein subunit	similar to uniprot|Q00711 Saccharomyces cerevisiae YKL148c SDH1 or uniprot|P47052 Saccharomyces cerevisiae YJL045w;	Succinate dehydrogenase subunit A	Putative succinate dehydrogenase flavoprotein subunit	Succinate dehydrogenase flavoprotein subunit	hypothetical succinate dehydrogenase subunit A	Succinate dehydrogenase flavoprotein subunit	Succinate dehydrogenase, flavoprotein subunit	Succinate dehydrogenase flavoprotein subunit	Succinate dehydrogenase, flavoprotein subunit	Succinate dehydrogenase	Succinate dehydrogenase, flavoprotein subunit	Succinate dehydrogenase, flavoprotein subunit	Succinate dehydrogenase flavoprotein subunit	Succinate dehydrogenase flavoprotein subunit	Succinate dehydrogenase flavoprotein	Succinate dehydrogenase flavoprotein subunit	Succinate dehydrogenase flavoprotein subunit	Succinate dehydrogenase, flavoprotein subunit	Putative succinate dehydrogenase, flavoprotein subunit	
ECOLI00689	Succinate dehydrogenase iron-sulfur subunit	succinate dehydrogenase iron-sulfur protein, mitochondrial precursor;	Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone. [Source:SGD;Acc:S000003964]	highly similar to sp|P21801 Saccharomyces cerevisiae Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (EC 1.3.5.1) (IP), hypothetical start	Succinate dehydrogenase iron-sulfur protein subunit	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC140.01]	highly similar to sp|P21801 Saccharomyces cerevisiae YLL041c SDH2 succinate dehydrogenase iron-sulfur protein subunit singleton, hypothetical start	Succinate dehydrogenase iron-sulfur protein	Succinate dehydrogenase iron-sulfur protein	Succinate dehydrogenase subunit B	DEHA2G19382p;highly similar to uniprot|P21801 Saccharomyces cerevisiae YLL041C SDH2 Iron-sulfur protein subunit of succinate dehydrogenase;	Putative succinate dehydrogenase iron-sulfur protein	Probable iron sulfur protein associated with succinate dehydrogenase/fumarate reductase	Succinate dehydrogenase, iron-sulfur protein	Succinate dehydrogenase iron-sulfur subunit	Succinate dehydrogenase, iron-sulfur protein	Succinate dehydrogenase	Succinate dehydrogenase, iron-sulfur protein	Succinate dehydrogenase, iron-sulfur subunit	Succinate dehydrogenase iron-sulfur protein	Succinate dehydrogenase iron-sulfur	Succinate dehydrogenase iron-sulfur protein	Succinate dehydrogenase iron-sulfur protein subunit	Succinate dehydrogenase iron-sulfur protein	Succinate dehydrogenase, iron-sulfur protein	Putative succinate dehydrogenase, iron-sulfur protein	Succinate dehydrogenase iron-sulfur protein	similar to SP:P21912; identified by sequence similarity; putative succinate dehydrogenase, iron-sulfur protein	
ECOLI00690	2-oxoglutarate dehydrogenase E1 component	Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step in the tricarboxylic acid (TCA) cycle, the oxidative decarboxylation of alpha-ketoglutarate to form succinyl- CoA. [Source:SGD;Acc:S000001387]	highly similar to sp|P20967 Saccharomyces cerevisiae YIL125w KGD1 2-oxoglutarate dehydrogenase complex E1 component singleton, hypothetical start	Alpha-ketoglutarate dehydrogenase	2-oxoglutarate dehydrogenase, E1 component	Oxoglutarate dehydrogenase	Oxoglutarate dehydrogenase	2-oxoglutarate dehydrogenase E1 component	DEHA2F17798p;highly similar to uniprot|P20967 Saccharomyces cerevisiae YIL125W KGD1 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex;	similar to GB:M77829, GB:S73482, SP:P29972, PID:1314304, PID:1314306,  and PID:180501; identified by sequence similarity; putative 2-oxoglutarate dehydrogenase, E1 component	Putative 2-oxoglutarate dehydrogenase	2-oxoglutarate dehydrogenase, E1 component	2-oxoglutarate dehydrogenase E1 component	2-oxoglutarate dehydrogenase, E1 component	SucA	2-oxoglutarate dehydrogenase	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component	2-oxoglutarate dehydrogenase, E1 component	2-oxoglutarate dehydrogenase E1 component	2-oxoglutarate dehydrogenase E1 component	Oxoglutarate dehydrogenase E1 component	2-oxoglutarate dehydrogenase E1 component	2-oxoglutarate dehydrogenase E1 component	2-oxoglutarate dehydrogenase E1 component	2-oxoglutarate decarboxylase	2-oxoglutarate dehydrogenase E1 component	2-oxoglutarate dehydrogenase E1 component	2-oxoglutarate dehydrogenase E1 component	2-oxoglutarate dehydrogenase, E1 component	
ECOLI00691	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	hypothetical protein;similar to dihydrolipoamide S-succinyltransferase;	similar to sp|P19262 Saccharomyces cerevisiae YDR148c KGD2 2-oxoglutarate dehydrogenase complex E2 component and tr|Q9UWE0 Aspergillus fumigatus Dihydrolipoamide succinyltransferase, no start	Dihydrolipoamide S-succinyltransferase	Probable dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC776.15c]	similar to sp|P19262 Saccharomyces cerevisiae YDR148c KGD2 2-oxoglutarate dehydrogenase complex E2 component, start by similarity	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	Dihydrolipoamide S-succinyltransferase	Dihydrolipoamide S-succinyltransferase	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	highly similar to uniprot|P19262 Saccharomyces cerevisiae YDR148c KGD2 oxoglutarate dehydrogenase complex E2 component;	DEHA2E03894p;similar to uniprot|P19262 Saccharomyces cerevisiae YDR148C KGD2 Dihydrolipoyl transsuccinylase a component of the mitochondrial alpha-ketoglutarate dehydrogenase complex;	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	SucB	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide	2-oxoglutarate dehydrogenase, dihydrolipoamide succinyltransferase E2 component	Dihydrolipoamide acyltransferase	Dihydrolipoamide succinyltransferase	Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex	Dihydrolipoamide succinyltransferase component	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex	2-oxoglutarate dehydrogenase complex, E2 component	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	Putative 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex	
ECOLI00692	Succinyl-CoA ligase [ADP-forming] subunit beta	succinyl-CoA ligase beta-chain, mitochondrial precursor;	Beta subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate. [Source:SGD;Acc:S000003476]	highly similar to sp|Q9P567 Neurospora crassa Probable succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial precursor, start by similarity	Succinyl-CoA ligase [ADP-forming] subunit beta	Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC1620.08]	Succinyl-CoA ligase [ADP-forming] subunit beta	Succinyl-CoA ligase [ADP-forming] subunit beta	Succinyl-CoA synthetase, beta subunit	Succinyl-CoA ligase [ADP-forming] subunit beta	ATP-specific succinyl-CoA synthetase beta subunit, putative	Succinate--CoA ligase	Succinyl-CoA ligase [ADP-forming] subunit beta	Succinyl-CoA synthetase beta chain	Succinyl-CoA ligase [ADP-forming] subunit beta	highly similar to uniprot|P53312 Saccharomyces cerevisiae YGR244c LSC2 succinate-CoA ligase beta subunit;	Succinyl-CoA synthetase beta chain	DEHA2G23584p;similar to uniprot|P53312 Saccharomyces cerevisiae YGR244C LSC2 Beta subunit of succinyl-CoA ligase which is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate,;	Succinyl-CoA ligase [ADP-forming] subunit beta	Succinyl-CoA synthetase beta subunit	Succinyl-CoA synthetase beta subunit	similar to GB:M25532, SP:P16562, PID:1262817,  and PID:339883; identified by sequence similarity; putative succinyl-CoA synthetase, beta subunit	Succinyl-CoA synthetase beta chain	Succinyl-CoA ligase [ADP-forming] subunit beta	Probable succinyl-CoA synthetase, beta subunit	Succinate-CoA ligase (ADP-forming), beta chain	hypothetical succinyl-CoA synthetase beta subunit	Succinyl-CoA synthetase beta chain	Succinyl-CoA ligase [ADP-forming] subunit beta	
ECOLI00693	Succinyl-CoA ligase [ADP-forming] subunit alpha	succinyl-CoA ligase alpha-chain, mitochondrial precursor;	Alpha subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate; phosphorylated. [Source:SGD;Acc:S000005668]	highly similar to tr|Q9P727 Neurospora crassa, hypothetical start	Succinyl-CoA ligase [ADP-forming] subunit alpha	Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC16E8.17c]	similar to sp|P53598 Saccharomyces cerevisiae YOR142w LSC1 succinate-CoA ligase alpha subunit singleton, hypothetical start	Succinyl-CoA ligase [ADP-forming] subunit alpha	Succinyl-CoA synthetase alpha subunit	Succinyl-CoA synthetase, alpha subunit	Succinyl-CoA ligase [ADP-forming] subunit alpha	succinyl-CoA synthetase alpha subunit, putative	Succinyl-CoA synthetase	Succinyl-CoA ligase [ADP-forming] subunit alpha	Succinyl-CoA ligase [ADP-forming] subunit alpha	highly similar to uniprot|P53598 Saccharomyces cerevisiae YOR142w LSC1 succinate-CoA ligase alpha subunit;	Succinyl-CoA synthetase alpha chain	DEHA2G10384p;similar to uniprot|P53598 Saccharomyces cerevisiae YOR142W LSC1 Alpha subunit of succinyl-CoA ligase;	Succinyl-CoA ligase [ADP-forming] subunit alpha	Succinyl-CoA synthetase alpha subunit	Succinyl-CoA ligase	similar to GB:X68836, SP:P31153,  and PID:36327; identified by sequence similarity; putative succinyl-CoA synthetase, alpha chain	Succinyl-CoA ligase [ADP-forming] subunit alpha	Succinyl-CoA ligase [ADP-forming] subunit alpha	Succinyl-CoA ligase [ADP-forming] subunit alpha	Succinyl-CoA ligase [ADP-forming] subunit alpha	Succinyl-CoA ligase [ADP-forming] subunit alpha	Probable succinyl-CoA synthetase, alpha subunit	Succinate--CoA ligase (ADP-forming); alpha subunit	
ECOLI00694	Mannosyl-D-glycerate transport/metabolism system repressor mngR	Lmo0958 protein	similar to Z80226-37|CAB02406.1| percent identity: 27 in 246 aa putative transcription regulator	Putative sucrose repressor	Lin0957 protein	Residues 1 to 240 of 240 are 99 pct identical to residues 1 to 240 of a 240 aa protein from Escherichia coli K12 ref: NP_415258.1 transcriptional regulator of succinylCoA synthetase operon	conserved hypothetical putative transcriptional regulator (GntR family) YvoA	identified by match to protein family HMM PF00392 transcriptional regulator, GntR family	Code: K; COG: COG2188 transcriptional regulator of succinylCoA synthetase operon	Putative transcriptional regulator, GntR family	Code: K; COG: COG2188 transcriptional regulator of succinylCoA synthetase operon	hypothetical protein	Transcriptional regulator, GntR family COG1522 [K] Transcriptional regulators	Transcriptional regulator, GntR family	putative transcriptional regulator	Transcriptional regulator	Complete genome	Histidine utilization repressor	transcriptional regulator of succinylCoA synthetase operon Code: K; COG: COG2188	Transcriptional regulator	Transcriptional regulator, GntR family	transcription regulator	Transcriptional regulator, GntR family	Fatty acyl-responsive regulator	Transcriptional regulator, GntR family	DNA-binding transcriptional dual regulator, fatty -acyl-binding	Fatty acyl-responsive regulator	Transcriptional regulator, GntR family	Putative uncharacterized protein	
ECOLI00695	Heat-responsive suppressor hrsA	Code: G; COG: COG1299 protein modification enzyme, induction of ompC	induction of ompC; Code: G; COG: COG1299 protein modification enzyme	PTS system, EIIabc component	PTS system, fructose-specific II ABC component	Fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component; IIB component; IIC component	PTS system, fructose-specific II ABC component	PTS system, fructose subfamily, IIC subunit	Putative uncharacterized protein	Putative uncharacterized protein	PTS system, fructose-specific II ABC component	PTS system fructose-specific IIABC components	Fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component ; IIB component ; IIC component	PTS family enzyme IIA	Fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component ; IIB component ; IIC component	MngA protein	Fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component	PTS system, fructose subfamily, IIC subunit	PTS system, fructose subfamily, IIC subunit TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vsp:VS_II0605 PTS family enzyme IIA	PTS system, EIIabc component	PTS system, fructose subfamily, IIC subunit	
ECOLI00696	Alpha-mannosidase mngB	Residues 1 to 877 of 877 are 97 pct identical to residues 1 to 877 of a 877 aa protein from Escherichia coli K12 ref: NP_415260.1 putative sugar hydrolase	glycoside hydrolase, family 38 PFAM: glycoside hydrolase, family 38 glycosyl hydrolases 38-like KEGG: cpe:CPE1415 putative alpha-mannosidase	putative glycosyl hydrolase	putative sugar hydrolase Code: G; COG: COG0383	Glycoside hydrolase family 38	Glycosy hydrolase, family 38	Alpha-mannosidase	Glycoside hydrolase family 38	Putative uncharacterized protein	Putative uncharacterized protein	Alpha-mannosidase mngB	Putative glycosyl hydrolase	Alpha-mannosidase	Alpha-mannosidase	Putative sugar hydrolase	Glycoside hydrolase family 38	Putative alpha-mannosidase	Alpha-mannosidase	Glycoside hydrolase family 38	MngB protein	Alpha-mannosidase	Glycoside hydrolase family 38	Glycoside hydrolase family 38	Alpha-mannosidase-like protein	putative sugar hydrolase	glycoside hydrolase family 38 PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: vsp:VS_II0606 putative sugar hydrolase	Alpha-mannosidase (GH38)	putative glycosyl hydrolase	

ECOLI00697	Cytochrome d ubiquinol oxidase subunit 1	Cytochrome D ubiquinol oxidase subunit I	Probable cytochrome oxidase subunit 1	Putative cytochrome bd-I oxidase subunit I	Cytochrome d ubiquinol oxidase subunit I	CydA	Cytochrome d ubiquinol oxidase, subunit I	Cytochrome d oxidase	Cytochrome d ubiquinol oxidase subunit I	Probable cytochrome D ubiquinol oxidase, subunit I	Cytochrome d ubiquinol oxidase subunit I	putative cytochrome d ubiquinol oxidase, subunit I	Cytochrome d ubiquinol oxidase subunit 1	similar to GP:9858822, and SP:P11026; identified by sequence similarity; putative cytochrome d ubiquinol oxidase, subunit I	Cytochrome d ubiquinol oxidase, subunit I	Cytochrome D ubiquinol oxidase subunit I	Cytochrome D ubiquinol oxidase subunit I	Cytochrome d ubiquinol oxidase, subunit I	Cytochrome D ubiquinol oxidase subunit I	Cytochrome D ubiquinol oxidase subunit I	Putative cytochrome D ubiquinol oxidase subunit I	Cytochrome d ubiquinol oxidase, subunit I	CYTOCHROME D UBIQUINOL OXIDASE SUBUNIT I	Cytochrome d ubiquinol oxidase, subunit I	Cytochrome d terminal oxidase, polypeptide subunit I	similar to AX065515-1|CAC25997.1| percent identity: 80 in 500 aa putative cytochrome D ubiquinol oxidase subunit I	Cytochrome d ubiquinol oxidase subunit I	Cytochrome d ubiquinol oxidase subunit I	Cytochrome D ubiquinol oxidase subunit I	
ECOLI00698	Cytochrome d ubiquinol oxidase subunit 2	Probable cytochrome oxidase subunit 2	Cytochrome D ubiquinol oxidase subunit II	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase, subunit II	CydB	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase subunit II	Cytochrome d ubiquinol oxidase, subunit II	CydB protein	Cytochrome d ubiquinol oxidase subunit II	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase subunit II	Cytochrome d ubiquinol oxidase subunit 2	identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203 cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome D ubiquinol oxidase subunit II	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase, subunit II	Putative cytochrome ubiquinol oxidase subunit	Cytochrome d ubiquinol oxidase subunit 2	similar to AE007030-1|AAK45928.1| percent identity: 50 in 337 aa putative cytochrome D ubiquinol oxidase subunit II	Cytochrome d ubiquinol oxidase subunit II	Cytochrome D ubiquinol oxidase subunit II	Cytochrome d ubiquinol oxidase, subunit II	CydB protein	Residues 1 to 379 of 379 are 99 pct identical to residues 1 to 379 of a 379 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286462.1 cytochrome d terminal oxidase polypeptide subunit II	
ECOLI00700	Uncharacterized protein ybgE	Putative uncharacterized protein VV2281	Putative membrane protein	Conserved hypothetical protein	Protein ybgE	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein VP1055	Uncharacterized protein ybgE	Putative uncharacterized protein	Residues 1 to 97 of 97 are 100 pct identical to residues 1 to 97 of a 97 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286463.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative inner membrane lipoprotein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Hypothetical protein	Putative inner membrane lipoprotein	hypothetical protein	Code: S; COG: COG3790 conserved hypothetical protein	Code: S; COG: COG3790 conserved hypothetical protein	Code: S; COG: COG3790; orf conserved hypothetical protein	Putative membrane protein	Hypothetical protein	Putative uncharacterized protein ybgE	Hypothetical protein	protein YbgE	Hypothetical protein precursor	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG3790	
ECOLI00701	Acyl-CoA thioester hydrolase ybgC	Thioesterase family protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein HI0386	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative acyl-CoA thioester hydrolase	Putative uncharacterized protein VV2279	Putative uncharacterized protein	Esterase	Putative uncharacterized protein	Putative uncharacterized protein STY0790	Putative thioesterase	conserved hypothetical protein	Acyl-CoA thioester hydrolase ybgC	Thioesterase family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative thioesterase	Putative thioesterase	PMID: 10876240 PMID: 3294803 PMID: 9278503 PMID: 8905232 PMID: 11206551 PMID: 11258796 PMID: 10493123 best DB hits: BLAST: swissprot:P08999; YBGC_ECOLI 15.6 KDA PROTEIN IN CYDB-TOLQ; E=2e-11 pir:D82152; conserved hypothetical protein VC1840 [imported] -; E=4e-11 gb:AAK03055.1; (AE006136) unknown [Pasteurella multocida]; E=8e-11 COG: ybgC; COG0824 Predicted thioesterase; E=2e-12 conserved hypothetical protein-putative acyl-CoA thioesterase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00702	Protein tolQ	TolQ protein	TolQ protein	TolQ protein	Protein tolQ	identified by match to PFAM protein family HMM PF04186 MotA/TolQ/ExbB proton channel family protein	Putative biopolymer transport protein	ExbB/TolQ family protein	TolQ protein	TolQ	Protein tolQ	Tol biopolymer transport system, TolQ protein	TolQ Protein	TolQ protein	Related to biopolymer transport protein	Putative TolQ transport transmembrane protein	Putative TolQ protein	Adventurous gliding motility protein X	TolQ protein	similar to GP:13898973; identified by sequence similarity; putative tolQ protein	TolQ protein	TolQ protein	TolQ protein	Putative TolQ-like translocation protein	Putative TolQ-like translocation protein	MotA/TolQ/ExbB proton channel family protein	TolQ protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN	TolQ protein	
ECOLI00703	Protein tolR	TolR protein	Protein tolR	TolR protein	TolR	Tol biopolymer transport system, TolR protein	TolR protein	TolR protein	putative tolR membrane protein	TonB system transport protein ExbD2	Protein tolR	similar to GP:13898974; identified by sequence similarity; putative TonB system transport protein, ExbD/TolR family	Biopolymer transport protein, ExbD/TolR family	TolR	TolR protein	TolR protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN	TolR protein	BIOPOLYMER TRANSPORT EXBD PROTEIN	TolR membrane protein	Protein tolR	Putative tolR protein, uptake of enterochelin; tonB-dependent uptake of B colicins	TolR membrane protein	TOLR PROTEIN	Residues 1 to 142 of 142 are 100 pct identical to residues 1 to 142 of a 142 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286466.1 putative inner membrane protein, involved in the tonB-independent uptake of group A colicins	TolR colicin import membrane protein	TolR protein	TolR protein	TolR protein	
ECOLI00704	Protein tolA	LisH domain-containing protein C1711.05 [Source:GeneDB_Spombe;Acc:SPBC1711.05]	TolA protein	Protein tolA	Putative uncharacterized protein	SalB antigen	TolA	TolA protein	Possible TolA-related transport transmembrane protein	hypothetical tolA protein	TolA protein	similar to GP:13898975, and GP:13898975; identified by sequence similarity; putative tolA protein	TolA protein	TolA protein	Product confidence : hypothetical Gene name confidence : putative predicted by Codon_usage predicted by FrameD HYPOTHETICAL SIGNAL PEPTIDE PROTEIN	Putative uncharacterized protein	TolA protein	Membrane spanning protein, required for outer membrane integrity	Residues 1 to 413 of 413 are 97 pct identical to residues 1 to 421 of a 421 aa protein from Escherichia coli K12 ref: NP_415267.1 membrane spanning protein, required for outer membrane integrity	TolA colicin import membrane protein	Probable tola-related transport transmembrane protein	TolA protein	weakly similar to TolA protein hypothetical protein	conserved gene TolA colicin import membrane protein	weakly similar to TolA protein hypothetical protein	M protein	Outer membrane protein	Putative uncharacterized protein usp45	tol protein, membrane spanning protein	
ECOLI00705	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB precursor	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB	putative TolB protein	Protein tolB	Protein tolB	Protein tolB precursor	similar to GP:13898976, and GP:13898976; identified by sequence similarity; putative tolB protein	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB	Protein tolB precursor	Protein tolB	
ECOLI00706	Peptidoglycan-associated lipoprotein	Peptidoglycan-associated lipoprotein	Outer membrane protein P6	Peptidoglycan-associated lipoprotein	Peptidoglycan-associated lipoprotein	Outer membrane lipoprotein omp16 homolog	Peptidoglycan-associated lipoprotein	putative peptidoglycan-associated lipoprotein	Peptidoglycan-Associated Lipoprotein	Peptidoglycan-associated lipoprotein	identified by match to PFAM protein family HMM PF00691 lipoprotein, Pal family	Peptidoglycan-associated lipoprotein, putative	Peptidoglycan-associated lipoprotein	Putative peptidoglycan-associated lipoprotein	Putative peptidoglycan-associated lipoprotein	Peptidoglycan-associated lipoprotein	Peptidoglycan-associated lipoprotein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN PRECURSOR	Peptidoglycan-associated lipoprotein	Putative peptidoglycan-associated lipoprotein	LIPOPROTEIN	Outer membrane lipoprotein omp16 precursor	Peptidoglycan-associated lipoprotein	Peptidoglycan-associated lipoprotein	omp16 protein - Brucella abortus, contains similarity to peptidoglycan-associated lipoprotein precursor	Peptidoglycan-associated lipoprotein	Peptidoglycan-associated lipoprotein	Residues 9 to 181 of 181 are 100 pct identical to residues 1 to 173 of a 173 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286469.1 peptidoglycan-associated lipoprotein	Peptidoglycan-associated lipoprotein Pal	
ECOLI00707	Uncharacterized protein ybgF	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV2273	Putative exported protein	conserved hypothetical protein	Hypothetical protein ybgF	Putative uncharacterized protein	Putative periplasmic protein	Putative periplasmic protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative periplasmic protein	Putative uncharacterized protein VP1062	Putative uncharacterized protein ybgF	Tol system periplasmic component	Putative uncharacterized protein	Residues 1 to 263 of 263 are 98 pct identical to residues 1 to 263 of a 263 aa protein from Escherichia coli K12 ref: NP_415270.1 orf, conserved hypothetical protein	Putative exported protein	TPR repeat	YbgF protein	Probable transmembrane protein	Similar to unknown protein YbgF of Escherichia coli	Similar to conserved hypothetical protein hypothetical protein	conserved gene outer membrane protein	
ECOLI00708	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase	Quinolinate synthetase A	Quinolinate synthetase A protein	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	hypothetical quinolinate synthetase A	Quinolinate synthetase A protein	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	Quinolinate synthetase A	
ECOLI00710	Zinc transporter zitB	Cation efflux system protein	Probable cation transport protein	ZINC TRANSPORTER;11_1510, ZINC TRANSPORTER (endosomes), ZNT4_HUMAN, gene found by Glimmer;	295aa long hypothetical cation efflux system protein czcD	Cation efflux system	hypothetical protein	CzcD	Putative cation transport protein	Cation efflux system protein	Cobalt-zinc-cadmium resistance protein czcD	Zinc transporter zitB	Cation-efflux system membrane protein	Lmo2575 protein	Co/Zn/Cd efflux system component	Cation efflux family protein	Cation-efflux system integral membrane protein	Zinc transporter zitB	CDS_ID OB1399 cation efflux system permease	similar to AX066993-1|CAC26724.1| percent identity: 80 in 251 aa putative cation efflux system protein	cation efflux system protein	Putative uncharacterized protein	Cobalt-zinc-cadmium resistance protein	Cation efflux protein	Lin2720 protein	Heavy metal efflux pump	Residues 1 to 313 of 313 are 99 pct identical to residues 1 to 313 of a 313 aa protein from Escherichia coli K12 ref: NP_415273.1 putative transport system permease protein	Zinc transporter zitB	Cation-efflux system membrane protein homolog	
ECOLI00709	Nicotinamide riboside transporter pnuC	Nicotinamide riboside transporter pnuC	Putative integral membrane protein	Probable transporter	Putative uncharacterized protein	Probable transporter	Nicotinamide mononucleotide transporter	PnuC protein	Nucleoside transporter, PnuC family	Nicotinamide mononucleotide transporter	Nicotinamide mononucleotide transporter, PnuC family	putative nicotinamide mononucleotide transporter	Protein pnuC	Putative transporter	identified by match to protein family HMM PF04973; match to protein family HMM TIGR01528 nucleoside transporter, PnuC family	Nicotinamide mononucleotide transport protein	Nicotinamide mononucleotide transporter PnuC, putative	Transporter, putative	Nicotinamide mononucleotide transporter	Putative membrane transport protein	Putative membrane protein	Required for NMN transport	hypothetical protein	Nicotinamide mononucleotide transporter	Residues 1 to 239 of 239 are 100 pct identical to residues 1 to 239 of a 239 aa protein from Escherichia coli K12 ref: NP_415272.1 required for NMN transport	Intergral membrane NMN transport protein PnuC	Protein PnuC	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark putative transporter	NMN family, nucleoside/purine/pyrimidine transporter	
ECOLI00711	Uncharacterized protein ybgS	Hypothetical protein ybgS	Putative homeobox protein	Residues 1 to 126 of 126 are 100 pct identical to residues 1 to 126 of a 126 aa protein from Escherichia coli K12 ref: NP_415274.1 putative homeobox protein	putative homeobox protein	similar to Salmonella typhi CT18 probable secreted protein probable secreted protein	Uncharacterized protein ybgS	putative homeobox protein	putative homeobox protein	putative homeobox protein	Putative uncharacterized protein	Putative homeobox protein	putative homeobox protein	conserved hypothetical protein YbgS	Putative uncharacterized protein precursor	Putative homeobox protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative homeobox protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Probable secreted protein	Putative homeobox protein	Putative homeobox protein	
ECOLI00712	Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe- sensitive	3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase, catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by phenylalanine or high concentration of tyrosine or tryptophan.  [Source:SGD;Acc:S000002442]	highly similar to sp|P14843 Saccharomyces cerevisiae YDR035w ARO3 2-dehydro-3-deoxyphosphoheptonate aldolase, phenylalanine-inhibited P2.438.f2.1, hypothetical start	Phospho-2-dehydro-3-deoxyheptonate aldolase	Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited [Source:GeneDB_Spombe;Acc:SPAP8A3.07c]	Phospho-2-dehydro-3-deoxyheptonate aldolase	Phospho-2-dehydro-3-deoxyheptonate aldolase, phe- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase	highly similar to uniprot|P14843 Saccharomyces cerevisiae YDR035w ARO3 2-dehydro-3-deoxyphosphoheptonate aldolase;	Phospho-2-dehydro-3-deoxyheptonate aldolase, class I	Phospho-2-dehydro-3-deoxyheptonate aldolase, phe- sensitive	AroG	Phospho-2-dehydro-3-deoxyheptonate aldolase	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase	Phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthetase) phenylalanine repressible	Phospho-2-dehydro-3-deoxyheptonate aldolase	Putative phospho-2-dehydro-3-deoxyheptonate aldolase	putative 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe- sensitive	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_function: 3-deoxy-7-phosphoheptulonate synthase activity [goid 0003849]; go_process: aromatic amino acid family biosynthesis [goid 0009073] phospho-2-dehydro-3-deoxyheptonate aldolase, putative	Phospho-2-dehydro-3-deoxyheptonate aldolase, phe- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe- sensitive	PMID: 6125934 PMID: 10425687 best DB hits: BLAST: swissprot:P00886; AROG_ECOLI PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE; E=1e-114 pir:A81791; 2-dehydro-3-deoxyphosphoheptonate aldolase (EC 4.1.2.15); E=1e-107 pir:F81214; phospho-2-dehydro-3-deoxyheptonate aldolase,; E=1e-107 COG: aroG; COG0722 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP); E=1e-115 PFAM: PF00793; DAHP synthetase I family; E=2.1e-143 phospho-2-dehydro-3-deoxyheptonate aldolase	Putative 3-deoxy-D-arabinoheptulosonate-7- phosphate synthase	Phospho-2-dehydro-3-deoxyheptonate aldolase	3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, DAHP synthetase	Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe- sensitive	2-dehydro-3-deoxyphosphoheptonate aldolase (EC 4.1.2.15)	3-deoxy-7-phosphoheptulonate synthase	
ECOLI00713	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	highly similar to sp|P00950 Saccharomyces cerevisiae Phosphoglycerate mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1) (PGAM 1) (MPGM 1) (BPG-dependent PGAM 1), start by similarity	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	Phosphoglycerate mutase [Source:GeneDB_Spombe;Acc:SPAC26F1.06]	highly similar to sp|P00950 Saccharomyces cerevisiae YKL152c GPM1 phosphoglycerate mutase, start by similarity	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	phosphoglycerate mutase, putative	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	DEHA2E21054p;highly similar to uniprot|P00950 Saccharomyces cerevisiae YKL152C GPM1 Tetrameric phosphoglycerate mutase of the glycolytic pathway converts 3-phosphoglycerate to 2- phosphoglycerate;	similar to GB:M61199, SP:P28290,  and PID:181123; identified by sequence similarity; putative phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	Probable phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	
ECOLI00714	Aldose 1-epimerase	Aldose 1-epimerase	Aldose 1-epimerase	Aldose 1-epimerase	Aldose 1-epimerase	Aldose 1-epimerase	Aldose 1-epimerase	GalM	Galactose-1-epimerase	Aldose epimerase	Aldose 1-epimerase	hypothetical aldose 1-epimerase	Aldose 1-epimerase	Aldose 1-epimerase	Aldose 1-epimerase	Aldose 1-epimerase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE ALDOSE 1-EPIMERASE PROTEIN	Aldose 1-epimerase	aldose 1-epimerase	ALDOSE 1-EPIMERASE	Aldose 1-epimerase	Galactose-1-epimerase	aldose 1-epimerase	Aldose 1-epimerase	Aldose-1-epimerase	Aldose 1-epimerase	Galactose-1-epimerase	Residues 1 to 346 of 346 are 99 pct identical to residues 1 to 346 of a 346 aa protein from Escherichia coli K12 ref: NP_415277.1 galactose-1-epimerase (mutarotase)	Putative aldose 1-epimerase	
ECOLI00715	Galactokinase	Galactokinase	Galactokinase	Probable galactokinase	Galactokinase	Putative galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	putative galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	Galactokinase	galactokinase	Putative galactokinase	Galactokinase	Galactokinase	Galactokinase	
ECOLI00716	Galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridyl transferase, synthesizes glucose-1-phosphate and UDP-galactose from UDP- D-glucose and alpha-D-galactose-1-phosphate in the second step of galactose catabolism. [Source:SGD;Acc:S000000222]	similar to sp|P09580 Kluyveromyces lactis Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) and sp|P08431 Saccharomyces cerevisiae YBR018c GAL7 UDP-glucose--hexose-1-phosphate uridylyltransferase, start by similarity	Galactose-1-phosphate uridylyltransferase [Source:GeneDB_Spombe;Acc:SPBPB2B2.10c]	gi|120909|sp|P09580|GAL7_KLULA Kluyveromyces lactis Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase), start by similarity	Galactose-1-phosphate uridylyltransferase	DEHA2C02376p;similar to uniprot|P08431 Saccharomyces cerevisiae YBR018C GAL7 Galactose-1-phosphate uridyl transferase;	Putative galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	Putative galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	go_function: UTP-galactose-1-phosphate uridylyltransferase activity [goid 0017103] galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	Residues 1 to 348 of 348 are 99 pct identical to residues 1 to 348 of a 348 aa protein from Escherichia coli K12 ref: NP_415279.1 galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	IPR001937: Galactose-1-phosphate uridyl transferase, class I galactose-1-phosphate uridylyltransferase	similar to Salmonella typhi CT18 galactose-1-phosphate uridylyltransferase galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase	Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase; Similar to: HI0820, GAL7_HAEIN galactose-1-phosphate uridylyltransferase	Galactose-1-phosphate uridylyltransferase GalT protein	Similar to Q9CM11 Galactose-1-phosphate uridylyltransferase from Pasteurella multocida (348 aa).  FASTA: opt: 1312 Z-score: 1558.0 E(): 6.2e-79 Smith-Waterman score: 1312; 56.231identity in 329 aa overlap Galactose-1-phosphate uridylyltransferase	
ECOLI00717	UDP-glucose 4-epimerase	UDP-glucose 4-epimerase	Uncharacterized protein C365.14c [Source:GeneDB_Spombe;Acc:SPBC365.14c]	UDP-glucose 4-epimerase	Putative UDP-glucose 4-epimerase	UDP-glucose 4-epimerase-like protein	UDP-glucose-4-epimerase	UDP-glucose 4-epimerase	UDP-glucose 4-epimerase	similar to GB:M31516, GB:M30142, SP:P08174, and PID:181476; identified by sequence similarity; putative UDP-glucose 4-epimerase	UDP-glucose 4-epimerase	go_process: galactose metabolism [goid 0006012] galactose metabolism-related protein, putative	UDP-glucose 4-epimerase	Putative UDP-glucose 4-epimerase	UDP-galactose-4-epimerase	UDP-glucose 4-epimerase	Residues 5 to 342 of 342 are 99 pct identical to residues 1 to 338 of a 338 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286480.1 UDP-galactose-4-epimerase	UDP-glucose 4-epimerase	UDP-glucose 4-epimerase	UDP-galactose 4-epimerase	similar to Salmonella typhi CT18 UDP-glucose 4-epimerase UDP-glucose 4-epimerase	similar to BR1066, UDP-glucose 4-epimerase GalE-1, UDP-glucose 4-epimerase	Galactose epimerase	UDP-glucose-4-epimerase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase)	UDP-glucose 4-epimerase	UDPglucose 4-epimerase	UDP-glucose 4-epimerase	Code: M; COG: COG1087 UDP-galactose-4-epimerase	
ECOLI00718	Putative molybdenum transport ATP-binding protein modF	similar to tr|Q12298 Saccharomyces cerevisiae YDR061W Putative membrane protein, hypothetical start	Uncharacterized ABC transporter ATP-binding protein C323.04 [Source:GeneDB_Spombe;Acc:SPAC323.04]	similar to sgd|S0002468 Saccharomyces cerevisiae YDR061w, start by similarity	DEHA2F24948p;similar to uniprot|Q12298 Saccharomyces cerevisiae YDR061W Mitochondrial protein member of the ATP-binding cassette (ABC) transporter family;	Putative molybdenum transport ATP-binding protein	ModF	Putative molybdenum transport ATP-binding protein ModF	Probable molybdenum ABC transporter, ATP-binding protein	Putative molybdenum transport ATP-binding protein	Putative molybdenum transport ATP-binding protein modF	go_component: mitochondrion [goid 0005739]; go_function: ATP-binding cassette (ABC) transporter activity [goid 0004009] hypothetical protein	ABC transporter, ATP-binding protein	Putative molybdenum transport ATP-binding protein	ATP-binding component of molybdate transport system	ATP-binding component of molybdate transport system	Residues 1 to 490 of 490 are 98 pct identical to residues 1 to 490 of a 490 aa protein from Escherichia coli K12 ref: NP_415281.1 ATP-binding component of molybdate transport system	Putative molybdenum transport ATP-binding protein modF	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC superfamily (atp_bind), molybdenum transporter	similar to Salmonella typhi CT18 putative molybdenum transport ATP-binding protein ModF (photorepair protein PhrA) putative molybdenum transport ATP-binding protein ModF (photorepair protein PhrA)	ABC molybdenum transporter, ATP-binding subunit modF	Similar to Escherichia coli putative molybdenum transport ATP-binding protein ModF or PhrA or B0760 SWALL:MODF_ECOLI (SWALL:P31060) (490 aa) fasta scores: E(): 1e-48, 36.45% id in 480 aa, and to Yersinia pestis putative molybdenum transport ATP-binding protein ModF or YPO1142 SWALL:Q8ZGY0 (EMBL:AJ414146) (496 aa) fasta scores: E(): 7.5e-48, 36.76% id in 457 aa putative ABC transport system, ATP-binding protein	ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA ModF protein	Putative ABC superfamily (Atp_bind), molybdenum transporter	identified by similarity to SP:P31060; match to protein family HMM PF00005 putative molybdenum ABC transporter, ATP-binding protein ModF	Code: P; COG: COG1119 ATP-binding component of molybdate transport system	Evidence 2b : Function of strongly homologous gene; PubMedId : 11421278; Product type t : transporter putative anion transport protein (ABC superfamily, ATP-binding protein)	Code: P; COG: COG1119 ATP-binding component of molybdate transport system	Code: P; COG: COG1119 ATP-binding component of molybdate transport system	
ECOLI00719	Transcriptional regulator modE	Transcriptional regulator modE	Molybdenum transport protein ModE	Molybdenum transport protein ModE	ModE	Probable molybdenum transport regulator	Putative molybdenum transport protein ModE	Molybdenum transport protein	Hypothetical molybdenum transport repressor protein ModE	Transcriptional regulator modE	Putative molybdenum-binding protein	Putative molybdenum-binding protein	Molybdenum transport regulatory protein ModE	Putative molybdenum transport protein	Molybdate transport regulator ModE, putative	Putative molybdenum-binding protein	MOLYBDENUM-PTERIN-BINDING PROTEIN	Transcriptional regulator ModE	Transcriptional regulator modE	Residues 1 to 262 of 262 are 100 pct identical to residues 1 to 262 of a 262 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286482.1 molybdate uptake regulatory protein	Transcriptional regulator modE	Putative transcription regulator protein	Transcriptional regulator modE	transcriptional repressor of modABCD operon (molybdate uptake)	similar to Salmonella typhi CT18 putative molybdenum transport protein ModE putative molybdenum transport protein ModE	Molybdenum transport regulatory (Repressor) protein ModE	Similar to: HI1694, MODE_HAEIN transcriptional regulator ModE	N-terminal domain of molybdenum-binding protein ModE protein	Molybdate transport regulator	
ECOLI00721	Molybdate-binding periplasmic protein	Molybdate-binding protein	Molybdenum ABC transporter, periplasmic molybdenum-binding protein modA	Molybdate-binding periplasmic protein	Molybdate-binding periplasmic protein	Molybdate-binding periplasmic protein	ABC-type molybdate transport system, periplasmic component	Molybdenum ABC transporter, periplasmic molybdenum-binding protein	Putative ABC transporter substrate-binding protein	Probable molybdenum ABC transporter	Molybdenum ABC transporter, molybdenum-binding protein	ModA	Putative molybdate-binding lipoprotein	ABC-type molybdate transport system, periplasmic component	Molybdenum ABC transporter, periplasmic molybdate -binding protein, putative	ABC transporter, substrate binding protein	Molybdate-binding periplasmic protein	Molybdate-binding periplasmic protein	Lmo1041 protein	ABC-type transporter, periplasmic component	Molybdate-binding protein	Molybdenum ABC transporter, periplasmic molybdate -binding protein	Putative molybdenum transport-related, exported protein	hypothetical molybdenum ABC transporter,periplasmic molybdenum-binding protein	Molybdate-binding periplasmic protein	identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256 molybdenum ABC transporter, molybdate-binding protein	Molybdenum ABC transporter, periplasmic molybdenum-binding protein	Molybdenum ABC transporter, periplasmic molybdenum-binding protein	Molybdenum ABC transporter, periplasmic molybdenum-binding protein	
ECOLI00722	Molybdenum transport system permease protein modB	Molybdenum transporter, permease protein	Molybdenum ABC transporter, permease protein modB	Molybdate transport permease protein	Molybdenum transport system permease protein modB	Sulfate transport system permease protein	Molybdenum ABC transporter, permease protein	Putative ABC transporter permease protein	ModB	ABC-type molybdate transport system, permease component	ABC transporter, membrane spanning protein	Molybdenum transport system permease protein ModB	Molybdenum ABC transporter, permease protein	Lmo1040 protein	Molybdenum transport system permease protein modB	Molybdenum ABC transporter, permease	Putative molybdenum transport-related membrane protein	putative molybdenum transport system permeaseprotein ModB	Molybdenum transport system permease protein modB	identified by match to protein family HMM PF00528 molybdenum ABC transporter, permease protein, putative	similar to GP:15075953; identified by sequence similarity; putative molybdenum ABC transporter, permease protein	Molybdenum ABC transporter, permease protein	Molybdenum ABC transporter, permease protein	Molybdenum ABC transporter, permease protein	Molybdenum transport system permease protein	Molybdenum ABC transporter permease protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE MOLYBDENUM TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN	ABC transporter permease protein	Putative transporter	
ECOLI00723	Molybdenum import ATP-binding protein modC	Molybdenum ABC transporter, ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum ABC transporter, ATP-binding protein	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	hypothetical molybdenum ABC transporter, ATP-binding protein	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE MOLYBDENUM TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	molybdenum transport protein modC	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	Residues 1 to 352 of 352 are 99 pct identical to residues 1 to 352 of a 352 aa protein from Escherichia coli K12 ref: NP_415286.1 ATP-binding component of molybdate transport	Molybdenum import ATP-binding protein modC	Molybdenum import ATP-binding protein modC	identified by similarity to SP:P09833 molybdate ABC transporter, ATP-binding protein	Molybdate ABC transporter, ATP-binding protein	
ECOLI00724	Phosphatase ybhA	Hypothetical protein ybhA	Putative phosphatase	Residues 35 to 306 of 306 are 98 pct identical to residues 1 to 272 of a 272 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286487.1 putative phosphatase	Hydrolase, HAD superfamily, Cof family	Putative hydrolase of the HAD family	hydrolase, HAD superfamily	IPR000150: Cof protein; IPR005834: Haloacid dehalogenase-like hydrolase; IPR006379: HAD-superfamily hydrolase, subfamily IIB putative hydrolase of the HAD superfamily	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative hydrolase of the HAD superfamily	Code: R; COG: COG0561 putative phosphatase	Putative hydrolase of the HAD superfamily	hydrolase of the HAD superfamily, putative identified by match to protein family HMM TIGR00099; match to protein family HMM TIGR01484	Putative phosphatase	Hypothetical protein	putative phosphatase Code: R; COG: COG0561	Predicted hydrolase of the HAD superfamily	conserved hypothetical protein	Cof-like hydrolase	Putative phosphatase	Putative uncharacterized protein	Phosphatase YbhA	Cof-like hydrolase	Pyridoxal phosphatase , fructose 1,6- bisphosphatase	Hydrolase, Cof family	Phosphatase YbhA	Cof-like hydrolase	Phosphatase YbhA	
ECOLI00725	6-phosphogluconolactonase	6-phosphogluconolactonase	6-phosphogluconolactonase	6-phosphogluconolactonase	best DB hits: BLAST: swissprot:O34499; YKGB_BACSU HYPOTHETICAL 38.4 KDA PROTEIN IN; E=1e-43 embl:CAB66198.1; (AL136502) hypothetical protein SCF43.09.; E=1e-31 embl:CAC13069.1; (AL445503) putative secreted protein; E=6e-31 COG: BS_ykgB; COG2706 3-carboxymuconate cyclase; E=1e-44 conserved hypothetical protein-putative 3-carboxymuconate cyclase	6-phosphogluconolactonase	Putative uncharacterized protein VPA0492	6-phosphogluconolactonase	6-phosphogluconolactonase	Residues 3 to 333 of 333 are 99 pct identical to residues 1 to 331 of a 331 aa protein from Escherichia coli K12 ref: NP_415288.1 putative isomerase	6-phosphogluconolactonase	Uncharacterized protein SAV1921	6-phosphogluconolactonase	identified by similarity to OMNI:NTL01SA1798 conserved hypothetical protein	Hypothetical protein SE1604	6-phosphogluconolactonase	putative 3-carboxymuconate cyclase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	conserved hypothetical protein	6-phosphogluconolactonase	Ortholog of S. aureus MRSA252 (BX571856) SAR2014 conserved hypothetical protein	conserved hypothetical protein	6-phosphogluconolactonase	6-phosphogluconolactonase	ortholog to Escherichia coli bnum: b0767 putative isomerase	Similar to Bacillus subtilis hypothetical protein YkgB SW:YKGB_BACSU (O34499) (349 aa) fasta scores: E(): 3.4e-41, 37.79% id in 344 aa, and to Lactococcus lactis hypothetical protein SW:YADB_LACLC (O86281) (341 aa) fasta scores: E(): 2.1e-36, 34.6% id in 341 aa conserved hypothetical protein	Code: G; COG: COG2706 putative isomerase	identified by similarity to EGAD:107450 conserved hypothetical protein	Code: G; COG: COG2706 putative isomerase	
ECOLI00726	Uncharacterized HTH-type transcriptional regulator ybhD	Transcriptional regulator, LysR family	Hypothetical transcriptional regulator ybhD	Putative transcriptional regulator LYSR-type	transcriptional regulator	similar to Escherichia coli K12 putative transcriptional regulator LYSR-type gi: 1786984 (339 aa).  BLAST with identity of 97% in 338 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Transcriptional regulator protein	putative transcriptional regulator	regulatory protein, LysR:LysR, substrate-binding	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	LysR-family transcriptional regulator	transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Hypothetical transcriptional regulator	hypothetical protein similarity to COG0583 Transcriptional regulator	transcriptional regulator, LysR family	Hypothetical transcriptional regulator YbhD	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bcn:Bcen_3720 transcriptional regulator, LysR family	Transcriptional regulator, LysR family	transcriptional regulator, LysR family identified by match to protein family HMM PF00126; match to protein family HMM PF03466	HTH-type transcriptional regulator fhuR	CpsY	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: ppu:PP_2054 transcriptional regulator, LysR family	transcriptional regulator, LysR-family	CpsY	predicted DNA-binding transcriptional regulator	Transcriptional regulator	transcription regulator	LysR-family transcriptional regulator	
ECOLI00727	Uncharacterized protein ybhH	Putative uncharacterized protein	Hypothetical protein ybhH	Putative uncharacterized protein ybhH	hypothetical protein	Residues 1 to 350 of 350 are 100 pct identical to residues 1 to 350 of a 350 aa protein from Escherichia coli K12 ref: NP_415290.1 orf, conserved hypothetical protein	Proline racemase protein	Putative uncharacterized protein	Similar to P75762 Hypothetical protein ybhH from E.  coli (350 aa). FASTA: opt: opt: 818 Z-score: 956.3 E(): 2.1e-45 Smith-Waterman score: 818; 40.230 identity in 348 aa overlap. Contains a frameshift after aa 112 and an in-frame stop codon after aa 302 ORF ftt1558c pseudo conserved hypothetical protein, pseudogene	identified by match to protein family HMM PF04303 Protein of unknown function (DUF453) superfamily	protein of unknown function DUF453	Putative uncharacterized protein	conserved hypothetical protein	pseudo conserved hypothetical protein, pseudogene Similar to P75762 Hypothetical protein ybhH from E.  coli (350 aa). FASTA: opt: opt: 818 Z-score: 956.3 E(): 2.1e-45 Smith-Waterman score: 818; 40.230 identity in 348 aa overlap. Contains a frameshift after aa 112 and an in-frame stop codon after aa 302 ORF ftt1558c	Putative uncharacterized protein ybhH	Hypothetical protein	pseudo conserved hypothetical protein, pseudogene	protein of unknown function DUF453 PFAM: protein of unknown function DUF453 KEGG: pfl:PFL_2497 protein of unknown function (DUF453) superfamily	conserved hypothetical protein Code: S; COG: COG2828	conserved protein of unknown function	Hypothetical protein	conserved hypothetical protein	Magnaporthe grisea hypothetical protein	ustilago_maydis hypothetical protein	Putative uncharacterized protein	Methylitaconate delta2-delta3-isomerase	Putative uncharacterized protein	FldA protein	protein of unknown function DUF453 PFAM: protein of unknown function DUF453 KEGG: pap:PSPA7_1269 FldA protein	
ECOLI00728	Inner membrane protein ybhI	Related to transmembrane transport proteins	Hypothetical protein ybhI	Putative membrane pump protein	Residues 1 to 477 of 477 are 99 pct identical to residues 1 to 477 of a 477 aa protein from Escherichia coli K12 ref: NP_415291.1 putative membrane pump protein	Putative membrane transport protein	Putative DASS family 2-oxoglutarate/malate:Na+ antiporter	Similar to: HI0020, YBHI_HAEIN conserved hypothetical protein	conserved hypothetical oxoglutarate/malate translocator	Putative membrane transport protein	Putative membrane transport protein	Putative uncharacterized protein ybhI	conserved hypothetical protein	Membrane transport protein	putative sodium:sulfate symporter	putative membrane pump protein Code: P; COG: COG0471	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Anion transporter	Anion transporter	Predicted transporter	Transporter, divalent anion:Na+ symporter (DASS) family	Anion transporter	Anion transporter precursor	Anion transporter	Di-and tricarboxylate transporters	Putative uncharacterized protein	Anion transporter	
ECOLI00729	Uncharacterized protein ybhJ	Aconitate hydratase, putative	Putative enzyme	Residues 1 to 734 of 734 are 96 pct identical to residues 1 to 761 of a 761 aa protein from Escherichia coli K12 ref: NP_415292.1 putative enzyme	Code: C; COG: COG1048 putative enzyme	Code: C; COG: COG1048 putative enzyme	Aconitate hydratase	aconitase A similarity to COG1048 Aconitase A(Evalue: 0)	Putative uncharacterized protein ybhJ	Putative aconitate hydratase	transcript_id=ENSMLUT00000002478	Putative aconitate hydratase	putative enzyme Code: C; COG: COG1048	putative hydratase	Aconitate hydratase domain protein	Aconitase family protein	Aconitate hydratase domain protein	Aconitase-related protein	Predicted hydratase	Putative aconitate hydratase	Aconitase family protein	Aconitate hydratase domain protein	Aconitase family protein	Putative uncharacterized protein	Aconitate hydratase, putative	Aconitase family protein	Aconitase family protein	Putative uncharacterized protein	Aconitate hydratase	
ECOLI00730	Acyl-CoA thioester hydrolase ybgC	Possible pectinesterase	Putative lipoprotein ybHC	Pectin methylesterase	Putative pectinesterase	Residues 1 to 427 of 427 are 99 pct identical to residues 1 to 427 of a 427 aa protein from Escherichia coli K12 ref: NP_415293.1 putative pectinesterase	Pectinesterase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark pectinesterase	putative pectinesterase	similar to Salmonella typhi CT18 possible pectinesterase precursor possible pectinesterase precursor	Putative pectinesterase	pectinesterase	Code: G; COG: COG4677 putative pectinesterase	Code: G; COG: COG4677 putative pectinesterase	Putative lipoprotein	pectinesterase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Putative lipoprotein YbhC	putative pectinesterase Code: G; COG: COG4677	putative pectinesterase	Pectinesterase precursor	Putative pectinesterase	Putative uncharacterized protein	Pectinesterase	Exported pectinesterase	Predicted pectinesterase	Pectinesterase	Pectinesterase precursor	Pectinesterase	Putative uncharacterized protein	
ECOLI00731	UPF0098 protein ybhB	Putative uncharacterized protein	Putative uncharacterized protein TVG0475661	Putative uncharacterized protein Ta1084	ATP/GTP binding protein	Putative uncharacterized protein STY0825	Protein ybhB	Putative uncharacterized protein	Putative uncharacterized protein ybhB	SCI5.02, conserved hypothetical protein, len: 179 aa; similar to many eg. TR:O06235 (EMBL:Z95388) hypothetical protein from Mycobacterium tuberculosis (176 aa) fasta scores; opt: 581, z-score: 658.0, E(): 2.6e-29, (52.9% identity in 172 aa overlap) conserved hypothetical protein	Residues 1 to 145 of 145 are 100 pct identical to residues 14 to 158 of a 158 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286536.1 orf, conserved hypothetical protein	conserved gene hypothetical protein	Putative uncharacterized protein	putative Phospholipid-binding protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative phospholipid-binding protein	Code: R; COG: COG1881 conserved hypothetical protein	Code: R; COG: COG1881 conserved hypothetical protein	conserved hypothetical protein	phospholipid-binding protein	Code: R; COG: COG1881; orf conserved hypothetical protein	Putative uncharacterized protein	YbhB and YbcL precursor	Possible kinase regulator	PEBP family protein PFAM: PEBP family protein KEGG: mth:MTH273 hypothetical protein	YbhB and YbcL	PEBP family protein	Phospholipid-binding protein	Phosphatidyl Ethanolamine-Binding protein	
ECOLI00732	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	7,8-diamino-pelargonic acid aminotransferase (DAPA), catalyzes the second step in the biotin biosynthesis pathway; BIO3 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis.  [Source:SGD;Acc:S000005341]	similar to sp|P50277 Saccharomyces cerevisiae YNR058w BIO3 DAPA aminotransferase, start by similarity	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine--8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	DEHA2G24750p;similar to uniprot|P50277 Saccharomyces cerevisiae YNR058W BIO3 7 8-diamino -pelargonic acid aminotransferase (DAPA);	Adenosylmethionine--8-amino-7-oxononanoate aminotransferase	Putative diaminopelargonic acid synthase	Putative diaminopelargonic acid synthase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	BioA	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Probable Adenosylmethionine-8-amino-7- oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Putative adenosylmethionine-8-amino-7- oxononanoate aminotransferase	putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine--8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	Adenosylmethionine--8-amino-7-oxononanoate aminotransferase	
ECOLI00733	Biotin synthase	Biotin synthase, catalyzes the conversion of dethiobiotin to biotin, which is the last step of the biotin biosynthesis pathway; complements E. coli bioB mutant. [Source:SGD;Acc:S000003518]	similar to sp|P32451 Saccharomyces cerevisiae YGR286c BIO2 biotin synthetase, start by similarity	Biotin synthase [Source:GeneDB_Spombe;Acc:SPCC1235.02]	similar to sp|P32451 Saccharomyces cerevisiae YGR286c BIO2 biotin synthetase singleton, hypothetical start	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	DEHA2B05390p;similar to uniprot|P32451 Saccharomyces cerevisiae YGR286c BIO2 biotin synthetase;	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	Biotin synthase	
ECOLI00734	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	Putative 8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	Probable 8-amino-7-oxononanoate synthase	Putative 8-amino-7-oxononanoate synthase/2-amino- 3-ketobutyrate coenzyme A ligase	8-amino-7-oxononanoate synthase	putative 8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	7-KETO-8-AMINOPELARGONIC ACID SYNTHETASE PUTATIVE 8-AMINO-7-OXONONANOATE SYNTHASE	Putative 8-amino-7-oxononanoate synthase/2-amino- 3-ketobutyrate coenzyme A ligase	Putative 8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	8-amino-7-oxononanoate synthase	
ECOLI00735	Biotin synthesis protein bioC	Biotin synthesis protein	Biotin synthesis protein	Putative uncharacterized protein	Probable biotin synthesis protein BioC	Biotin synthesis protein BioC	Biotin synthesis protein BioC	putative biotin synthesis protein BioC	Biotin synthesis protein bioC	Biotin synthesis protein BioC	Biotin synthesis protein BioC	Biotin synthesis protein	Biotin synthesis protein BioC	PUTATIVE METHYL TRANSFERASE	Biotin synthesis protein BioC, putative	Biotin synthesis protein BioC	Biotin biosynthesis; reaction prior to pimeloyl CoA	Biotin synthesis protein	Biotin synthesis BioC proein	SCBAC17F8.05c, possible methyltransferase, len: 285 aa: similar to many some of which reside within antibiotic biosynthetic clusters e.g. TR:Q54818 (EMBL:L35560) doxorubicin polyketide biosynthesis gene from Streptomyces peucetius (286 aa) fasta scores; opt: 258, Z-score: 287.1, 38.136% identity (39.130% ungapped) in 118 aa overlap, TR:Q9S0N6 (EMBL:AB032524) C5-O-methyltransferase AveD from the avermectin biosynthetic cluster of Streptomyces avermitilis (283 aa) fasta scores; opt: 249, Z-score: 277.5, 30.508% identity (34.123% ungapped) in 236 aa overlap and TR:AAK64748 (EMBL:AE007203) hypothetical protein from Rhizobium meliloti (261 aa) fasta scores; opt: 581, Z-score: 635.1, 41.406% identity (42.570% ungapped) in 256 aa overlap. putative methyltransferase	Biotin synthesis protein	Residues 14 to 264 of 264 are 97 pct identical to residues 1 to 251 of a 251 aa protein from Escherichia coli K12 ref: NP_415298.1 biotin biosynthesis; reaction prior to pimeloyl CoA	Biotin synthesis protein BioC	BioC protein	Biotin synthesis protein	Biotin synthesis protein	Biotin synthesis protein	IPR000051: SAM (and some other nucleotide) binding motif biotin biosynthesis; reaction prior to pimeloyl CoA	similar to Salmonella typhi CT18 biotin synthesis protein BioC biotin synthesis protein BioC	
ECOLI00736	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	DEHA2G24772p;similar to uniprot|P53630 Saccharomyces cerevisiae YNR057C BIO4 Dethiobiotin synthetase;	Dethiobiotin synthetase	Dethiobiotin synthetase	Putative Dethiobiotin synthase	Putative Dethiobiotin synthase	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	All4667 protein	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	identified by match to protein family HMM PF01656; match to protein family HMM TIGR00347 dethiobiotin synthetase	similar to GP:15159285; identified by sequence similarity; putative dethiobiotin synthase	Dethiobiotin synthetase	Dethiobiotin synthase	Dethiobiotin synthetase	PMID: 8250549 best DB hits: BLAST: swissprot:P36572; BIOD_SERMA DETHIOBIOTIN SYNTHETASE (DETHIOBIOTIN; E=8e-20 swissprot:P53558; BIOD_BACSU DETHIOBIOTIN SYNTHETASE (DETHIOBIOTIN; E=1e-19 gb:AAG55149.1; AE005258_13 (AE005258) dethiobiotin synthetase; E=1e-18 COG: BS_bioD; COG0132 Dethiobiotin synthetase; E=1e-20 PFAM: PF01656; Cobyrinic acid a,c-diamide synthase; E=0.077 dethiobiotin synthetase	Dethiobiotin synthetase	
ECOLI00738	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	identified by match to TIGR protein family HMM TIGR01698 excinuclease ABC, subunit B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	UvrABC system protein B	
ECOLI00739	UPF0052 protein ybhK	UPF0052 protein aq_778	Putative uncharacterized protein	UPF0052 protein PM0626	UPF0052 protein TM_1709	Putative uncharacterized protein VV1197	UPF0052 protein ybhK	Putative uncharacterized protein	UPF0052 protein lmo2473	Uncharacterized ACR	Hypothetical Cytosolic Protein	Putative uncharacterized protein	Conserved hypothetical protein	Hypothetical protein ybhK	UPF0052 protein SP_1565	identified by match to protein family HMM PF01933; match to protein family HMM TIGR01826 conserved hypothetical protein	UPF0052 protein VC_1023	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical conserved protein	Putative uncharacterized protein	UPF0052 protein SpyM3_0463/SPs1392	Conserved protein family UPF0052	Putative uncharacterized protein	Putative uncharacterized protein VP2097	Putative uncharacterized protein	UPF0052 protein ybhK	CDS_ID OB2467 hypothetical protein	similar to AF046871-3|AAC03105.1| percent identity: 35 in 313 aa conserved hypothetical protein	
ECOLI00740	Molybdenum cofactor biosynthesis protein A	Probable molybdenum cofactor biosynthesis protein A	Probable molybdenum cofactor biosynthesis protein A	Probable molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Probable molybdenum cofactor biosynthesis protein A	Probable molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Probable molybdenum cofactor biosynthesis protein A	hypothetical molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Putative molybdenum cofactor biosynthesis protein A	Putative molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis enzyme	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein A	Residues 28 to 356 of 356 are 99 pct identical to residues 1 to 329 of a 329 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286544.1 molybdopterin biosynthesis, protein A	
ECOLI00741	Molybdenum cofactor biosynthesis protein B	Putative molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein	Molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein B	Molybdopterin biosynthesis protein B	Molybdenum cofactor biosynthesis protein	Molybdenum cofactor biosynthesis protein	Molybdopterin biosynthesis enzyme	173aa long hypothetical molybdenum cofactor biosynthesis protein	Molybdenum cofactor biosynthesis protein moaB	Molybdenum cofactor biosynthesis protein B1	Molybdenum cofactor biosynthesis protein	MoaB-2 molybdenum cofactor biosynthesis protein	Molybdenum cofactor biosynthesis protein	hypothetical molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein B	Putative molybdenum cofactor biosynthesis protein	Molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein B	molybdenum cofactor biosynthesis protein B	identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177 molybdenum cofactor biosynthesis protein B, putative	Molybdenum cofactor biosynthesis protein B	Molybdenum cofactor biosynthesis protein	
ECOLI00742	Molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	Molybdopterin cofactor biosynthesis protein MoaC	Probable molybdenum cofactor biosynthesis protein C	Probable molybdenum cofactor biosynthesis protein C	hypothetical molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein MoaC	Molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	Molybdenum cofactor biosynthesis protein C	
ECOLI00743	Molybdopterin-converting factor subunit 1	Molybdopterin-converting factor subunit 1	MoaD	Molybdopterin converting factor, small subunit	Molybdenum cofactor biosynthesis protein D	Molybdopterin converting factor, subunit 1	Molybdopterin converting factor subunit 1	hypothetical protein	Molybdopterin converting factor subunit 1	similar to GP:15074101; identified by sequence similarity; putative molybdopterin converting factor, subunit 1	Molybdenum cofactor biosynthesis protein D	Molybdopterin converting factor	Molybdopterin converting factor	Molybdenum cofactor biosynthesis protein D	Molybdopterin converting factor subunit 1	Molybdenum cofactor biosynthesis protein D	Molybdopterin converting factor	Molybdopterin converting factor, subunit 1	MOLYBDOPTERIN (MPT) CONVERTING FACTOR, SUBUNIT 1	Molybdenum cofactor biosynthesis protein D	Molybdopterin biosynthesis	Molybdopterin converting factor, subunit 1	Molybdenum cofactor biosynthesis protein D	Residues 8 to 88 of 88 are 98 pct identical to residues 1 to 81 of a 81 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286547.1 molybdopterin biosynthesis	Molybdopterin [mpt] converting factor, subunit 1	Probable molybdopterin mpt converting factor (Subunit 1) protein	Molybdopterin	identified by match to protein family HMM PF02597; match to protein family HMM TIGR01682 molybdopterin converting factor, subunit 1	Molybdopterin-converting factor subunit 1	
ECOLI00744	Molybdopterin-converting factor subunit 2	Uncharacterized protein slr0903	Molybdopterin-converting factor chain 2	Molybdopterin-converting factor subunit 2	149aa long hypothetical molybdopterinconverting factor, subunit	Molybdopterin-converting factor subunit 2	Putative molybdopterin biosynthesis protein E	Molybdopterin-converting factor subunit 2	Molybdenum cofactor biosynthesis protein E	Molybdopterin-synthase large subunit related protein	Molybdopterin biosynthesis MoaE	Molybdopterin-converting factor subunit 2	Molybdopterin converting factor	Molybdopterin (MPT) converting factor, subunit 2	Molybdopterin-converting factor subunit 2	Molybdopterin-converting factor subunit 2	Molybdenum cofactor biosynthesis protein E	Molybdopterin converting factor, large subunit	Molybdopterin-converting factor subunit 2	Molybdopterin synthase catalytic subunit	Lmo1044 protein	Molybdopterin converting factor, large subunit	Molybdopterin converting factor subunit 2	putative molybdenum cofactor biosynthesisprotein E	Molybdopterin converting factor subunit 2	similar to SP:P30749; identified by sequence similarity; putative molybdopterin converting factor, subunit 2	Molybdopterin-converting factor subunit 2	Molybdopterin converting factor	Molybdopterin converting factor	
ECOLI00745	Inner membrane protein ybhL	Integral membrane protein	similar to GB:M86713, SP:P31522, PID:155488,  and PID:1322009; identified by sequence similarity; putative hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein CC_3663	Putative uncharacterized protein	Uncharacterized protein DR_0893	Putative uncharacterized protein	Conserved hypothetical membrane protein, probably cold-shock inducible	Lmo2207 protein	Membrane protein, putative	Uncharacterized protein BB_0539	Putative transport permease	Inner membrane protein ybhL	Membrane protein	similar to GP:15076248, and GP:15076248; identified by sequence similarity; putative membrane protein, putative	Putative uncharacterized protein	Membrane protein, putaive	Putative uncharacterized protein	Putative membrane protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Membrane protein, putative	hypothetical protein	hypothetical conserved protein	Uncharacterized membrane protein SpyM3_0260/SPs1599	INTEGRAL MEMBRANE PROTEIN	Conserved hypothetical membrane protein	
ECOLI00746	Uncharacterized protein ybhM	Hypothetical protein ybhM	Putative uncharacterized protein ybhM	Residues 10 to 246 of 246 are 98 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli K12 ref: NP_415308.1 orf, conserved hypothetical protein	putative integral membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative integral membrane protein	Code: R; COG: COG0670 conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein ybhM	conserved hypothetical protein Code: R; COG: COG0670	conserved hypothetical protein YbhM	Putative membrane protein	Conserved inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative integral membrane protein	Putative membrane protein	Putative membrane protein	Putative membrane protein	Putative integral membrane protein	Putative membrane protein	Putative integral membrane protein	Putative membrane protein	Putative uncharacterized protein	
ECOLI00747	Inner membrane protein ybhN	Uncharacterized protein slr0712	Putative uncharacterized protein	Putative membrane protein	Hypothetical protein ybhN	Putative membrane protein	PMID: 8590279 best DB hits: BLAST: swissprot:Q55979; Y712_SYNY3 HYPOTHETICAL 35.1 KD PROTEIN SLR0712; E=2e-23 gb:AAF20821.1; AF199025_2 (AF199025) LpiA [Sinorhizobium meliloti]; E=4e-17 gb:AAG55159.1; AE005259_10 (AE005259) orf, hypothetical protein; E=6e-14 COG: slr0712; COG0392 Predicted integral membrane protein; E=2e-24 conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical hypothetical  protein	Membrane protein, putative	Putative membrane protein	Putative uncharacterized protein ybhN	Putative uncharacterized protein	Residues 1 to 318 of 318 are 99 pct identical to residues 1 to 318 of a 318 aa protein from Escherichia coli K12 ref: NP_415309.1 orf, conserved hypothetical protein	putative negative regulator	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Membrane protein, putative	Putative negative regulator	membrane protein, putative	conserved Hypothetical protein	membrane protein, putative	Code: S; COG: COG0392 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	membrane protein, putative	Code: S; COG: COG0392; orf conserved hypothetical protein	putative transmembrane protein similarity:fasta; SWALL:Q92X69 (EMBL:AL591985); Rhizobium meliloti; hypothetical protein smb20093; length 313 aa; id=51.02; ungapped id=51.02; E()=1.4e-54; 292 aa overlap; query 11-302 aa; subject 10-301 aa	hypothetical conserved protein Similar to SMb20093 [Sinorhizobium meliloti] Similar to swissprot:Q92X69 Putative location:bacterial inner membrane Psort-Score: 0.4163; go_component: extrachromosomal DNA [goid 0046821]; go_function: ATP binding [goid 0005524]	Putative membrane protein	conserved hypothetical protein	
ECOLI00748	Putative cardiolipin synthetase ybhO	Probable phospholipase	Putative cardiolipin synthetase ybhO	Putative cardiolipin synthetase ybhO	Probable phospholipase	Probable phospholipase	Cardiolipin synthetase 2	pseudo	Cardiolipin synthetase	Putative cardiolipin synthase ybhO	Residues 1 to 413 of 413 are 98 pct identical to residues 1 to 413 of a 413 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286552.1 putative synthetase	IPR001736: Phospholipase D/Transphosphatidylase cardiolipin (CL) synthase	similar to Salmonella typhi CT18 putative phospholipase putative phospholipase	Phospholipase family protein	Putative cardiolipin synthetase ybhO	phospholipase	identified by similarity to SP:P75771; match to protein family HMM PF00614 cardiolipin synthetase	identified by match to protein family HMM PF00614 phospholipase family protein	Phospholipase D/Transphosphatidylase	Code: I; COG: COG1502 putative synthetase	Phospholipase D/Transphosphatidylase	Code: I; COG: COG1502 putative synthetase	Putative uncharacterized protein	Putative uncharacterized protein ybhO	phospholipase D/Transphosphatidylase	putative phospholipase	phospholipase D/Transphosphatidylase PFAM: phospholipase D/Transphosphatidylase KEGG: pol:Bpro_0025 phospholipase D/transphosphatidylase	phospholipase D family protein identified by match to protein family HMM PF00614	Putative phospholipase	
ECOLI00749	Uncharacterized protein ybhP	Putative uncharacterized protein	Putative uncharacterized protein ybhP	Endonuclease/exonuclease/phosphatase family protein	Hypothetical protein ybhP	Putative uncharacterized protein	Putative uncharacterized protein	best DB hits: BLAST: pir:T37061; probable secreted protein - Streptomyces coelicolor; E=5e-26 pir:T35483; hypothetical protein SC6C5.12c SC6C5.12c - Streptomyces; E=2e-17 swissprot:P75772; YBHP_ECOLI HYPOTHETICAL 28.8 KDA PROTEIN IN; E=3e-11 PFAM: PF00783; Inositol polyphosphate phosph; E=0.5 probable secreted protein	Endonuclease/exonuclease/phosphatase family protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein ybhP	Endonuclease/exonuclease/phosphatase family protein	Residues 1 to 253 of 253 are 100 pct identical to residues 1 to 253 of a 253 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286553.1 orf, conserved hypothetical protein	Putative uncharacterized protein	similar to conserved hypothetical proteins hypothetical protein	conserved gene endonuclease/exonuclease/phosphatase family protein	similar to conserved hypothetical proteins hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	COG3568 metal-dependent hydrolase	Putative cytoplasmic protein	predicted endonuclease / exonuclease / phosphatase family protein	conserved hypothetical protein	identified by match to protein family HMM PF03372 endonuclease/exonuclease/phosphatase family protein	Endonuclease/exonuclease/phosphatase	Endonuclease/exonuclease/phosphatase	Code: R; COG: COG3568 conserved hypothetical protein	endonuclease / exonuclease / phosphatase family protein	
ECOLI00751	Inner membrane transport permease ybhR	Conserved protein	Putative ABC transporter permease protein	Putative uncharacterized protein	Putative inner membrane protein	Putative ABC transporter, permease protein	ABC transporter permease protein	ABC transporter, permease	Hypothetical protein ybhR	ABC transporter, permease protein, putative	Product confidence : putative Gene name confidence : hypothetical putative ABC transporter permease protein	ABC transporter permease protein	Inner membrane transport permease ybhR	Putative uncharacterized protein	Putative membrane protein	Residues 1 to 368 of 368 are 100 pct identical to residues 1 to 368 of a 368 aa protein from Escherichia coli O157:H7 ref: NP_308897.1 orf, conserved hypothetical protein	Putative ABC transporter permease protein	ABC transporter permease protein YbhR	Similar to putative ABC transporter permease protein, hypothetical start codon hypothetical protein	conserved gene ABC transporter permease protein	Similar to putative ABC transporter permease protein, hypothetical start codon hypothetical protein	Probable ABC superfamily, transport protein	IPR000412: ABC transporter, family 2 putative ABC superfamily (membrane) transport protein	similar to Salmonella typhi CT18 putative inner membrane protein putative inner membrane protein	Possible ABC transporter multidrug efflux pump, permease subunit	Putative ABC superfamily (Membrane) transport protein	ABC-type multidrug transport system, permease component	ABC transporter, permease	Code: V; COG: COG0842 conserved hypothetical protein	
ECOLI00750	Inner membrane protein ybhQ	Inner membrane protein ybhQ	Inner membrane protein ybhQ	Residues 1 to 136 of 136 are 100 pct identical to residues 1 to 136 of a 136 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286554.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YbhQ	Putative uncharacterized protein ybhQ	conserved hypothetical protein	conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein ybhQ	Putative uncharacterized protein	Putative membrane protein	Predicted inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Inner membrane protein YbhQ	Putative membrane protein	Putative membrane protein	
ECOLI00752	Inner membrane transport permease ybhS	Putative inner membrane protein	Putative uncharacterized protein	Putative ABC transporter ATP-binding protein or permease protein	ABC-type multidrug transporter permease protein	Inner membrane transport permease ybhS	ABC transporter permease protein	Product confidence : putative Gene name confidence : hypothetical putative ABC transporter permease protein	Inner membrane transport permease ybhS	Putative uncharacterized protein	Residues 1 to 377 of 377 are 99 pct identical to residues 1 to 377 of a 377 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286556.1 orf, conserved hypothetical protein	Putative ABC transporter permease protein	ABC transporter permease protein YbhS	Similar to ABC transporter (permease) hypothetical protein	conserved gene ABC transporter permease protein	Similar to ABC transporter (permease) hypothetical protein	identified by similarity to OMNI:NTL01LL0262 ABC transporter, permease protein	Probable ABC transport system, permease protein	putative ABC superfamily (membrane) transport protein	similar to Salmonella typhi CT18 putative inner membrane protein putative inner membrane protein	Possible ABC transporter multidrug efflux pump, permease subunit	Similar to Vibrio parahaemolyticus putative transmembrane protein VPA0488 SWALL:BAC61831 (EMBL:AP005085) (366 aa) fasta scores: E(): 2.5e-37, 32.96% id in 361 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YbhS or B0793 or C0876 or Z1013 or ECS0871 SWALL:YBHS_ECOLI (SWALL:P75775) (377 aa) fasta scores: E(): 6e-30, 30.7% id in 368 aa putative ABC transport system, membrane protein	Putative ABC superfamily (Membrane) transport protein	Similar to Lactococcus lactis ABC transporter permease protein YcfC TR:Q9CIV1 (EMBL:AE006262) (380 aa) fasta scores: E(): 1.7e-30, 37.46% id in 379 aa, and to Archaeoglobus fulgidus putative ABC transporter ATP-binding protein AF1005 TR:O29257 (EMBL:AE001034) (366 aa) fasta scores: E(): 1.4e-17, 22.06% id in 358 aa putative membrane protein	Code: V; COG: COG0842 conserved hypothetical protein	identified by similarity to GB:BAC50913.1; match to protein family HMM PF01061 ABC transporter, permease protein	ABC transporter, inner membrane subunit	Code: V; COG: COG0842 conserved hypothetical protein	ABC-2	
ECOLI00753	Uncharacterized ABC transporter ATP-binding protein ybhF	ABC transporter, ATP-binding protein	Putative ABC transporter ATP-binding protein	Hypothetical ABC transporter ATP-binding protein	ABC transporter ATP-binding component	Probable ABC transporter, ATP-binding protein	Putative ABC transporter ATP-binding protein	Hypothetical ABC transporter ATP-binding protein ybhF	Product confidence : putative Gene name confidence : hypothetical putative ABC transporter ATP-binding protein, consisting of 2 fused ATP-binding domains	ABC transporter ATP-binding component	ABC TRANSPORTER ATP-BINDING PROTEIN	Putative ATP-binding component of a transport system	CDS_ID OB2923 teichoic acid ABC transporter ATP-binding protein	Putative uncharacterized protein	Residues 1 to 583 of 583 are 99 pct identical to residues 1 to 583 of a 583 aa protein from Escherichia coli K12 ref: NP_415315.1 putative ATP-binding component of a transport system	ATPase component ABC-type multidrug transport system	ABC transporter ATP-binding protein YbhF	Similar to ABC-type multidrug transport, ATP-binding protein hypothetical protein	conserved gene ABC transporter ElsE	Similar to ABC-type multidrug transport, ATP-binding protein hypothetical protein	Probable ABC transporter system, ATP-binding protein	IPR001553: RecA bacterial DNA recombination protein; IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC-type multidrug transport system, ATPase component	similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein hypothetical ABC transporter ATP-binding protein	ABC transporter multidrug efflux pump, fused ATP- binding domains	Similar to Rhizobium meliloti putative ABC transporter ATP-binding protein, consisting of 2 fused ATP-binding domains RB0872 or SMB21206 SWALL:Q92V45 (EMBL:AL603645) (582 aa) fasta scores: E(): 2.1e-36, 39.39% id in 561 aa, and to Escherichia coli, and Shigella flexneri hypothetical ABC transporter ATP-binding protein YbhF or B0794 or SF0744 or S0785 SWALL:YBHF_ECOLI (SWALL:P75776) (578 aa) fasta scores: E(): 6e-36, 38.79% id in 562 aa putative BAC transport system, two-fused ATP-binding domains protein	Putative ABC-type multidrug transport system, ATPase component	ABC-type multidrug transport system, ATPase component	Code: V; COG: COG1131 putative ATP-binding component of a transport system	ABC transporter, ATP-binding protein	
ECOLI00754	UPF0194 membrane protein ybhG	Possible membrane fusion protein	HlyD family secretion protein	UPF0194 membrane protein ybhG	Putative uncharacterized protein	UPF0194 membrane protein ybhG precursor	Putative uncharacterized protein VC1659	Putative HlyD-family secretion protein	Putative uncharacterized protein	Product confidence : putative Gene name confidence : hypothetical putative protein secretion protein, HlyD family	Putative HlyD-family secretion protein	UPF0194 membrane protein ybhG	Putative uncharacterized protein	Residues 1 to 332 of 332 are 99 pct identical to residues 1 to 332 of a 332 aa protein from Escherichia coli O157:H7 ref: NP_308900.1 putative membrane protein	HlyD family secretion protein	Membrane Fusion Protein (MFP) YbhG	similar to membrane protein hypothetical protein	conserved gene HlyD family secretion protein	similar to membrane protein hypothetical protein	hypothetical protein	Probable membrane protein	Protein secretion protein	membrane permeases, predicted cation efflux pump	similar to Salmonella typhi CT18 HlyD-family secretion protein HlyD-family secretion protein	Putative uncharacterized protein gbs1431	identified by Glimmer2; putative conserved hypothetical protein	UPF0194 membrane protein YPTB1212	UPF0194 membrane protein ybhG	putative RND efflux membrane fusion protein precursor	
ECOLI00755	Uncharacterized HTH-type transcriptional regulator ybiH	Hypothetical transcriptional regulator ybiH	identified by match to PFAM protein family HMM PF03130 transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Product confidence : putative putative transcriptional regulator, TetR family protein	TRANSCRIPTIONAL REGULATOR, TETR FAMILY	Putative transcriptional regulator	transcriptional regulator	Probable transcriptional regulator, TetR family	Residues 1 to 227 of 227 are 100 pct identical to residues 1 to 227 of a 227 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286559.1 putative transcriptional regulator	Similar to putative transcriptional regulator	IPR001647: Bacterial regulatory protein TetR, HTH motif putative transcriptional repressor (TetR/AcrR family)	similar to Salmonella typhi CT18 hypothetical tetR-family transcriptional regulator hypothetical tetR-family transcriptional regulator	similar to BRA0462, transcriptional regulator, TetR family transcriptional regulator, TetR family	Putative tetR family transcriptional regulator	Transcriptional regulator, TetR family	Putative transcriptional repressor	Code: K; COG: COG1309 putative transcriptional regulator	Bacterial regulatory protein TetR, HTH motif	Code: K; COG: COG1309 putative transcriptional regulator	transcriptional regulator, TetR family	transcriptional regulator, TetR family	Code: K; COG: COG1309 putative transcriptional regulator	putative TetR family transcriptional regulator similarity:fasta; with=UniProt:Q92V43_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative transcriptional regulator, TetR family protein. Putative transcriptional regulator, TetR family protein.; length=225; id 64.319; 213 aa overlap; query 14-226; subject 6-218	Transcriptional regulator, TetR family	Transcriptional Regulator, TetR family	probable transcriptional regulator protein, TetR family similar to SMb21208 [Sinorhizobium meliloti] Similar to swissprot:Q92V43 Putative location:bacterial inner membrane Psort-Score: 0.1680; go_component: extrachromosomal DNA [goid 0046821]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	Hypothetical transcriptional regulator YbiH	transcriptional regulator, TetR family	
ECOLI00756	Putative ATP-dependent RNA helicase rhlE	similar to sp|P06634 Saccharomyces cerevisiae YOR204w DED1 ATP-dependent RNA helicase P28.1.f22.1, start by similarity	Dead-box ATP-dependent RNA helicase	ATP-dependent RNA helicase	ATP-dependent RNA helicase	PUTATIVE ATP-DEPENDENT RNA HELICASE (DEAD box family);02_0670, PUTATIVE ATP-DEPENDENT RNA HELICASE (DEAD box family), AN3_XENLA, gene found by Glimmer;	similar to uniprot|P23394 Saccharomyces cerevisiae YDR243c PRP28;	Putative ATP-dependent RNA helicase	ATP-dependent RNA helicase DeaD	ATP-dependent RNA helicase, DEAD/DEAH box family	DNA and RNA helicase	ATP-dependent RNA helicase	Putative ATP-dependent RNA helicase rhlE	ATP-dependent RNA helicase	Probable ATP-dependent RNA helicase	ATP-dependent RNA helicase DeaD	Putative ATP-dependent RNA helicase 1	putative ATP-dependent RNA helicase RhlE	ATP-dependent RNA helicase	Putative ATP-dependent RNA helicase rhlE	ATP-dependent RNA helicase RhlE	Probable ATP-dependent RNA helicase RhlE	Putative ATP-dependent RNA helicase	Putative ATP-dependent RNA helicase	go_component: cytoplasm [goid 0005737]; go_function: RNA helicase activity [goid 0003724]; go_process: mRNA processing [goid 0006397] ATP-dependent RNA helicase ded1, putative	ATP-dependent RNA helicase, DEAD box family	Putative ATP-dependent RNA helicase	PMID: 8037924 PMID: 9278503 PMID: 8905232 PMID: 1931833 best DB hits: BLAST: swissprot:P25888; RHLE_ECOLI PUTATIVE ATP-DEPENDENT RNA HELICASE; E=5e-78 gb:AAG55168.1; AE005260_7 (AE005260) putative ATP-dependent RNA; E=5e-78 pir:D83591; probable ATP-dependent RNA helicase PA0428 [imported] -; E=8e-77 COG: rhlE; COG0513 Superfamily II DNA and RNA helicases; E=4e-79 PFAM: PF00270; DEAD/DEAH box helicase; E=5.5e-70 PF02776; Thiamine pyrophosphate enzyme,; E=0.21 PF00271; Helicase conserved C-terminal d; E=3.5e-36 putative ATP-dependent RNA helicase rhlE	Product confidence : putative Gene name confidence : probable putative ATP-dependent RNA helicase protein	
ECOLI00757	Swarming motility protein ybiA	All5029 protein	PMID: 8037924 best DB hits: BLAST: swissprot:P30176; YBIA_ECOLI HYPOTHETICAL 18.7 KDA PROTEIN IN; E=3e-34 pir:A75416; conserved hypothetical protein - Deinococcus radiodurans; E=4e-05 pir:B83074; conserved hypothetical protein PA4580 [imported] -; E=1e-04 COG: ybiA; COG3236 Uncharacterized BCR; E=3e-35 conserved hypothetical protein	Residues 1 to 160 of 160 are 96 pct identical to residues 1 to 160 of a 160 aa protein from Escherichia coli K12 ref: NP_415319.1 orf, conserved hypothetical protein	identified by similarity to SP:P30176 conserved hypothetical protein	LmjF06.0130, predicted protein, len = 187 aa, possibly hypothetical protein; predicted pI = 9.9431 hypothetical protein, conserved	hypothetical protein, conserved	Code: S; COG: COG3236 conserved hypothetical protein	Code: S; COG: COG3236 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein TIGRFAM: conserved hypothetical protein: (1.7e-48) KEGG: jan:Jann_2797 hypothetical protein, ev=3e-59, 73% identity	conserved hypothetical protein	hypothetical protein COG3236 Uncharacterized protein conserved in bacteria	conserved hypothetical protein KEGG: ecj:JW0783 conserved hypothetical protein	conserved hypothetical protein identified by match to protein family HMM TIGR02464	Hypothetical protein	hypothetical protein, conserved	conserved hypothetical protein	Complete genome	predicted protein	conserved hypothetical protein Code: S; COG: COG3236	hypothetical protein, conserved previous systematic id LinJ06.0100	Hypothetical protein	Putative uncharacterized protein	PFAM: conserved hypothetical protein KEGG: jan:Jann_2797 hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI00758	Probable ATP-dependent helicase dinG	highly similar to sp|P06839 Saccharomyces cerevisiae YER171w RAD3 DNA helicase/ATPase, start by similarity	ATP-dependent helicase	Probable ATP-dependent helicase DinG	Putative uncharacterized protein	ATP-dependent helicase, DinG family	pseudo	putative ATP-dependent helicase, DinG family	Probable ATP-dependent helicase dinG	ATP-dependent helicase, DinG family	ATP-dependent helicase DinG	Probable ATP-dependent helicase	ATP-dependent helicase, DinG family	ATP-dependent helicase, DinG family	Probable ATP-dependent helicase dinG	ATP-dependent helicase	Residues 46 to 761 of 761 are 99 pct identical to residues 1 to 716 of a 716 aa protein from Escherichia coli O157:H7 ref: NP_308904.1 probably ATP-dependent helicase	Putative ATP-dependent helicase DinG	Probable ATP-dependent helicase	ATP-dependent DNA helicase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ATP-dependent helicase	LexA regulated (SOS) repair enzyme	similar to Salmonella typhimurium LexA regulated (SOS) repair enzyme LexA regulated (SOS) repair enzyme	ATP-dependent helicase	Putative ATP-dependent helicase DinG	Probable ATP-dependent DNA helicase	ATP-dependent helicase, DinG family	Helicase, putative	Probable ATP-dependent helicase dinG	
ECOLI00759	Uncharacterized protein ybiB	Phosphoribosyl transferase	Uncharacterized protein aq_209	Glutamine amidotransferase-phosphoribosyl anthranilate transferase	hypothetical anthranilate phosphoribosyltransferase	Putative uncharacterized protein	Anthranilate phosphoribosyltransferase	pseudo	All0601 protein	Glycosyl transferase family protein	hypothetical glycosyl transferase	Hypothetical protein ybiB	anthranilate phosphoribosyltransferase	Putative glycosyl transferase	Glycosyl transferase, putative	Glycosyl transferase family protein	Putative uncharacterized protein VPA1063	Putative enzyme	Anthranilate phosphoribosyltransferase	Residues 1 to 320 of 320 are 98 pct identical to residues 1 to 320 of a 320 aa protein from Escherichia coli K12 ref: NP_415321.1 putative enzyme	Putative glycosyl transferase	Putative anthranilate phosphoribosyltransferase protein	Anthranilate phosphoribosyltransferase	InterProMatches:IPR000312; Biological Process: metabolism (GO:0008152), Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757) anthranilate phosphoribosyltransferase	putative transferase	similar to Salmonella typhimurium putative transferase putative transferase	Putative glycosyl transferase	unnamed protein product; old function Glycosyl transferase family, assigned to unknown because of poor e-value	anthranilate phosphoribosyltransferase	
ECOLI00760	Uncharacterized oxidoreductase ybiC	Hypothetical oxidoreductase ybiC	Putative malate/lactate dehydrogenase	Uncharacterized oxidoreductase ybiC	Malate dehydrogenase-like protein	Residues 1 to 361 of 361 are 98 pct identical to residues 1 to 361 of a 361 aa protein from Escherichia coli K12 ref: NP_415322.1 putative dehydrogenase	identified by match to protein family HMM PF02615 malate/L-lactate dehydrogenase family protein	Malate/L-lactate dehydrogenase	Code: C; COG: COG2055 putative dehydrogenase	Code: C; COG: COG2055 putative dehydrogenase	Malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase	Code: C; COG: COG2055 putative dehydrogenase	Malate/L-lactate dehydrogenase	Putative malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase	Hypothetical oxidoreductase YbiC	Malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase PFAM: Malate/L-lactate dehydrogenase KEGG: bur:Bcep18194_B0783 malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase PFAM: Malate/L-lactate dehydrogenase KEGG: bcn:Bcen_3456 malate/L-lactate dehydrogenase	Putative hypothetical oxidoreductase	putative dehydrogenase Code: C; COG: COG2055	Malate/L-lactate dehydrogenase	hypothetical oxidoreductase	Malate/L-lactate dehydrogenase	Putative dehydrogenase	
ECOLI00761	UPF0379 protein ybiJ	UPF0379 protein ybiJ precursor	Putative uncharacterized protein ybiJ	Residues 1 to 86 of 86 are 100 pct identical to residues 1 to 86 of a 86 aa protein from Escherichia coli K12 ref: NP_415323.1 orf, conserved hypothetical protein	Similar to unknown protein YbiJ of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative periplasmic protein	Putative uncharacterized protein ybiJ	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ybiJ	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative exported protein	Protein YbiJ	
ECOLI00762	Uncharacterized protein ybiI	Putative uncharacterized protein	Hypothetical Zinc-finger containing protein	Hypothetical protein	Putative zinc-finger containing protein	Putative uncharacterized protein ybiI	Residues 1 to 88 of 88 are 96 pct identical to residues 1 to 88 of a 88 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286567.1 orf, conserved hypothetical protein	identified by match to protein family HMM PF01258 C4-type zinc finger protein, DksA/TraR family	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR000962: Zn-finger, prokaryotic DksA/TraR C4 type putative DnaK suppressor protein	similar to Salmonella typhi CT18 hypothetical Zinc-finger containing protein hypothetical Zinc-finger containing protein	Putative uncharacterized protein	zinc finger protein	DnaK suppressor protein	Putative DnaK suppressor protein	conserved hypothetical protein	Code: T; COG: COG1734 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 15294157; Product type f : factor putative RNA polymerase regulating factor	Code: T; COG: COG1734 conserved hypothetical protein	transcriptional regulators, TraR/DksA family	transcriptional regulators, TraR/DksA family	Code: T; COG: COG1734; orf conserved hypothetical protein	conserved hypothetical protein	transcriptional regulators, TraR/DksA family PFAM: zinc finger, DksA/TraR C4-type: (4.2e-13) KEGG: sil:SPO1411 C4-type zinc finger protein, DksA/TraR family, ev=1e-37, 82% identity	Putative uncharacterized protein	conserved hypothetical protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Transcriptional regulators, TraR/DksA family protein	C4-type zinc finger protein, DksA/TraR family	Transcriptional regulators, TraR/DksA family	
ECOLI00763	PKHD-type hydroxylase ybiX	PKHD-type hydroxylase PD_1553	PKHD-type hydroxylase XCC2773	PKHD-type hydroxylase CC_0027	PKHD-type hydroxylase piuC	PKHD-type hydroxylase BPSS1206	PKHD-type hydroxylase ybiX	PKHD-type hydroxylase BP3529	PKHD-type hydroxylase BB1978	PKHD-type hydroxylase SO_3913	PKHD-type hydroxylase BPP2533	PKHD-type hydroxylase ybiX	PKHD-type hydroxylase RPA3479	Residues 1 to 237 of 237 are 97 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli K12 ref: NP_415325.1 putative enzyme	PKHD-type hydroxylase NE2125	hypothetical protein	PKHD-type hydroxylase XF_0598	PKHD-type hydroxylase Pro_1271	PKHD-type hydroxylase XAC2942	conserved hypothetical protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type f : factor iron-uptake factor	PKHD-type hydroxylase PP_0862	Uncharacterized iron-dependent enzyme of 2OG-Fe(II) oxygenase superfamily	conserved hypothetical protein	Iron-uptake factor	identified by match to protein family HMM PF03171 oxidoreductase, 2OG-Fe(II) oxygenase family	identified by match to protein family HMM PF03171 oxidoreductase, 2OG-Fe(II) oxygenase family	2OG-Fe(II) oxygenase	Prolyl 4-hydroxylase, alpha subunit	
ECOLI00764	Catecholate siderophore receptor fiu	Probable outer membrane receptor for iron transport	Catecholate siderophore receptor fiu precursor	Catecholate siderophore receptor fiu	Outer membrane ferric siderophore receptor	identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783 outer membrane ferric siderophore receptor	TonB-dependent receptor	Code: P; COG: COG4774 putative outer membrane receptor for iron transport	TonB-dependent siderophore receptor precursor	Probable tonB-dependent receptor YbiL	TonB-dependent siderophore receptor precursor	Molybdate ABC transporter, permease protein	TonB-dependent siderophore receptor	TonB-dependent siderophore receptor	TonB-dependent receptor precursor	Catecholate siderophore receptor fiu	TonB-dependent siderophore receptor TIGRFAM: TonB-dependent siderophore receptor PFAM: TonB-dependent receptor; TonB-dependent receptor, plug KEGG: bur:Bcep18194_B0894 TonB-dependent siderophore receptor	TonB-dependent siderophore receptor TIGRFAM: TonB-dependent siderophore receptor PFAM: TonB-dependent receptor; TonB-dependent receptor, plug KEGG: bcn:Bcen_3559 TonB-dependent siderophore receptor	putative outer membrane ferric siderophore receptor	putative TonB-dependent siderophore receptor Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type rc : receptor	Putative ferric siderophore receptor protein	putative tonB-dependent receptor YbiL precursor	TonB-dependent receptor PFAM: TonB-dependent receptor; TonB-dependent receptor, plug KEGG: pat:Patl_2275 TonB-dependent receptor	TonB-dependent receptor for iron transport	TonB-dependent siderophore receptor precursor	TonB-dependent receptor, plug precursor	Outer membrane porin protein, putative ferrisiderophore receptor	TonB-dependent siderophore receptor precursor	Catecholate siderophore receptor Fiu	
ECOLI00765	UPF0379 protein ybiM	Uncharacterized protein mcbA	Residues 1 to 134 of 134 are 98 pct identical to residues 1 to 134 of a 134 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286570.1 orf, conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative exported protein	Putative uncharacterized protein ybiM	conserved hypothetical protein	conserved hypothetical protein YbiM	Putative uncharacterized protein precursor	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ybiM	Putative uncharacterized protein ybiM	Putative uncharacterized protein ybiM	Putative uncharacterized protein ybiM	Putative uncharacterized protein ybiM	Predicted protein	Putative uncharacterized protein ybiM	YbiM protein	Predicted protein	
ECOLI00767	Uncharacterized mscS family protein ybiO	Potassium efflux system KEFA	Putative membrane protein	Hypothetical protein ybiO	Putative membrane protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSMEMBRANE PROTEIN	Mechanosensitive ion channel family protein	Putative transport protein	hypothetical proteins, contains weak similarity to transport protein, (	hypothetical protein	Residues 1 to 687 of 687 are 99 pct identical to residues 55 to 741 of a 741 aa protein YBIO_ECOLI sp: P75783 orf, conserved hypothetical protein	Similar to potassium efflux system kefA hypothetical protein	conserved gene potassium efflux system KefA	Similar to potassium efflux system kefA hypothetical protein	mechanosensitive ion channel family protein	Mechanosensitive channel protein	paral putative transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Putative transport protein	identified by match to protein family HMM PF00924 mechanosensitive ion channel family protein	identified by match to protein family HMM PF00924 mechanosensitive ion channel family protein	MscS Mechanosensitive ion channel	Code: M; COG: COG0668 putative transport protein	Small-conductance mechanosensitive ion channel	Code: M; COG: COG0668 putative transport protein	Putative mechanosensitive protein	MscS Mechanosensitive ion channel	MscS Mechanosensitive ion channel	
ECOLI00766	Ribosomal RNA large subunit methyltransferase F	Putative methyltransferase C27D7.08c [Source:GeneDB_Spombe;Acc:SPAC27D7.08c]	Ribosomal RNA large subunit methyltransferase F	Ribosomal RNA large subunit methyltransferase F	Predicted SAM-dependent methyltransferase	Ribosomal RNA large subunit methyltransferase F	Ribosomal RNA large subunit methyltransferase F	hypothetical SAM-dependent methyltransferase	Hypothetical protein ybiN	Ribosomal RNA large subunit methyltransferase F	Putative uncharacterized protein	Ribosomal RNA large subunit methyltransferase F	Ribosomal RNA large subunit methyltransferase F	Ribosomal RNA large subunit methyltransferase F	Ribosomal RNA large subunit methyltransferase F	Ribosomal RNA large subunit methyltransferase F	Residues 1 to 335 of 335 are 99 pct identical to residues 1 to 335 of a 335 aa protein from Escherichia coli K12 ref: NP_415328.1 orf, conserved hypothetical protein	Ribosomal RNA large subunit methyltransferase F	similar to Salmonella typhimurium putative SAM-dependent methyltransferase putative SAM-dependent methyltransferase	Ribosomal RNA large subunit methyltransferase F	methyltransferase	Similar to Pseudomonas aeruginosa hypothetical protein PA3840 SWALL:Q9HXG4 (EMBL:AE004801) (336 aa) fasta scores: E(): 2.5e-61, 52.25% id in 310 aa, and to Yersinia pestis hypothetical protein YPO2519 or Y1668 SWALL:Q8ZDP0 (EMBL:AJ414152) (336 aa) fasta scores: E(): 1.7e-59, 50.98% id in 304 aa conserved hypothetical protein	Ribosomal RNA large subunit methyltransferase F	Ribosomal RNA large subunit methyltransferase F	identified by similarity to OMNI:VC1614; match to protein family HMM PF05971 conserved hypothetical protein	identified by match to protein family HMM PF05971 Predicted SAM-dependent methyltransferases	identified by match to protein family HMM PF05971 conserved hypothetical protein	Protein of unknown function DUF890	Protein of unknown function DUF890	
ECOLI00768	Glutamine transport ATP-binding protein glnQ	Probable glutamine ABC-transporter, ATP-binding protein	Glutamine transport ATP-binding protein	Glutamine transport ATP-binding protein glnQ	ATP-binding protein glutamine ABC transporter	Glutamine transport ATP-binding protein	Glutamine transport ATP-binding protein	Glutamine transport ATP-binding protein	Glutamine transport ATP-binding protein	Glutamine ABC transporter, ATP-binding protein	ATP-binding component of glutamine high-affinity transport system	Residues 1 to 240 of 240 are 99 pct identical to residues 1 to 240 of a 240 aa protein from Escherichia coli K12 ref: NP_415330.1 ATP-binding component of glutamine high-affinity transport system	Putative glutamine transport ATP-binding protein	Glutamine transport ATP-binding protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase ABC superfamily (atp_bind), glutamine high-affinity transporter	similar to Salmonella typhi CT18 glutamine transport ATP-binding protein GlnQ glutamine transport ATP-binding protein GlnQ	ABC glutamine transporter, ATP-binding subunit glnQ	Glutamine high-affinity transporter	ABC transporter related	Code: E; COG: COG1126 ATP-binding component of glutamine high-affinity transport system	Code: E; COG: COG1126 ATP-binding component of glutamine high-affinity transport system	glutamine ABC transporter, ATP-binding protein	ABC polar amino acid transporter, ATPase subunit	Code: E; COG: COG1126 ATP-binding component of glutamine high-affinity transport system	ABC transporter related	glutamine ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	Glutamine transport ATP-binding protein GlnQ	ABC transporter related PFAM: ABC transporter related SMART: ATPase KEGG: dde:Dde_1428 ATPase	Putative glutamine transport ATP-binding protein	
ECOLI00769	Glutamine transport system permease protein glnP	Glutamine transport system permease protein	Glutamine transport system permease protein glnP	Glutamine transport system permease protein	Glutamine transport system permease protein	Glutamine transport system permease protein	Glutamine transport system permease protein	Glutamine ABC transporter, permease protein	Glutamine transport system permease protein glnP	Residues 1 to 219 of 219 are 100 pct identical to residues 1 to 219 of a 219 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286574.1 glutamine high-affinity transport system; membrane component	Putative glutamine transport system permease	Amino acid ABC transporter, permease protein, 3- TM region, His/Glu/Gln/Arg/opine	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), glutamine high-affinity transporter	similar to Salmonella typhi CT18 glutamine transport system permease protein GlnP glutamine transport system permease protein GlnP	ABC glutamine transporter, permease subunit glnP	Glutamine high-affinity transporter	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Code: E; COG: COG0765 glutamine high-affinity transport system membrane component	Code: E; COG: COG0765 glutamine high-affinity transport system, membrane component	glutamine ABC transporter, permease protein start codon not provided	ABC polar amino acid transporter, inner membrane subunit	Code: E; COG: COG0765 glutamine high-affinity transport system, membrane component	Amino acid ABC transporter, permease protein, 3- TM region, His/Glu/Gln/Arg/opine	glutamine ABC transporter, permease protein identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726	Glutamine transport system permease protein GlnP	Putative glutamine transport system permease	Glutamine transport system permease protein glnP	Polar amino acid ABC transporter, inner membrane subunit	Glutamine transport system permease	
ECOLI00770	Glutamine-binding periplasmic protein	Glutamine-binding periplasmic protein	Probable glutamine ABC-transporter, periplasmic substrate-binding protein	Glutamine-binding periplasmic protein precursor	Glutamine ABC transporter, periplasmic glutamine- binding protein	Glutamine-binding periplasmic protein	Glutamine-binding periplasmic protein	Glutamine-binding periplasmic protein	Glutamine-binding periplasmic protein	Glutamine-binding periplasmic protein	CDS_ID OB1004 glutamine ABC transporter glutamine-binding protein	Residues 1 to 248 of 248 are 99 pct identical to residues 1 to 248 of a 248 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286575.1 periplasmic glutamine-binding protein; permease	Putative glutamine-binding periplasmic protein	ABC-type amino acid transport system periplasmic component	glutamine ABC transporter substrate-binding protein	IPR001311: Solute-binding protein/glutamate receptor; IPR001638: Bacterial extracellular solute-binding protein, family 3 ABC superfamily (bind_prot), glutamine high-affinity transporter	similar to Salmonella typhi CT18 glutamine-binding periplasmic protein precursor glutamine-binding periplasmic protein precursor	ABC tranporter, periplasmic glutamine-binding protein glnH	Glutamine high-affinity transporter	permease; Code: ET; COG: COG0834 periplasmic glutamine-binding protein	identified by similarity to SP:P10344; match to protein family HMM PF00497 glutamine ABC transporter, glutamine-binding protein	permease; Code: ET; COG: COG0834 periplasmic glutamine-binding protein	glutamine ABC transporter, glutamine-binding protein	extracellular solute-binding protein, family 3	ABC amino acid transporter, periplasmic ligand binding protein	permease; Code: ET; COG: COG0834 periplasmic glutamine-binding protein	Twin-arginine translocation pathway signal precursor	Glutamine-binding periplasmic protein	Putative glutamine-binding periplasmic protein precursor	
ECOLI00771	DNA protection during starvation protein	Putative uncharacterized protein	Dps family protein	DNA protection during starvation protein 1	DNA protection during starvation protein	DNA protection during starvation protein	DNA-binding protein, starvation-inducible	DNA protection during starvation protein	Starvation-inducible DNA-binding protein	DNA protection during starvation protein	Non-heme iron-containing ferritin	similar to GP:15157662, and SP:P27430; identified by sequence similarity; putative Dps family protein	DNA protection during starvation protein	PMID: 1340475 PMID: 8021175 best DB hits: BLAST: pir:T35689; hypothetical protein SC7C7.11 SC7C7.11 - Streptomyces; E=5e-30 swissprot:Q47953; FTPA_HAEDU FINE TANGLED PILI MAJOR SUBUNIT (24; E=1e-17 embl:CAB61290.1; (AL132991) putative DNA-binding protein; E=3e-16 COG: dps; COG0783 Starvation-inducible DNA-binding protein; E=1e-14 PFAM: PF02047; Dps protein family; E=4.1e-45 probable DNA protection during starvation protein	Putative uncharacterized protein	Putative peroxide resistance protein	Starvation-inducible DNA-binding protein or fine tangled pili major subunit	DNA PROTECTION DURING STARVATION PROTEIN	Peroxide resistance protein Dpr	Putative DNA protection during starvation protein	DNA protection during starvation protein	similar to AY065628-1|AAL40885.1| percent identity: 58 in 164 aa putative DNA-binding protein	Starvation-induced DNA-binding protein	SCF55.20, probable DNA-binding protein, len: 187 aa; similar to SW:FTPA_HAEDU (EMBL:U18769) Haemophilus ducreyi fine tangled pili major subunit (24 KD surface protein) FtpA, 189 aa; fasta scores: opt: 559 z-score: 670.3 E(): 5.8e-30; 49.1% identity in 171 aa overlap and to SW:DPS_ECOLI (EMBL:X69337) Escherichia coli DNA protection during starvation protein Dps or PexB, 166 aa; fasta scores: opt: 276 z-score: 338.0 E(): 1.9e-11; 34.2% identity in 161 aa overlap. Contains match to Prosite entry PS00818 Dps protein family signature 1 putative DNA-binding protein	Stress induced DNA-binding protein	DNA protection during starvation protein	Residues 42 to 208 of 208 are 100 pct identical to residues 1 to 167 of a 167 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286576.1 global regulator, starvation conditions	DNA protection during starvation protein	pseudo	
ECOLI00772	Inner membrane transporter rhtA	Putative ABC transporter permease protein	Conserved hypothetical transmembrane protein with duf6	Putative uncharacterized protein	Putative uncharacterized protein CPE0758	Integral membrane protein	Putative uncharacterized protein	PecM-related protein	Putative membrane protein	Putative transmembrane protein	Inner membrane transport protein ybiF	Membrane protein, putative	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative membrane protein	Conserved membrane spanning protein, DUF6 family	Putative membrane protein	Inner membrane transporter rhtA	similar to AE004565-8|AAG04749.1| percent identity: 33 in 272 aa putative integral membrane protein	hypothetical protein	BH1931 protein	SCD10.06, possible integral membrane protein, len: 295 aa; similar to TR:Q9RUT6 (EMBL:AE001976) Deinococcus radiodurans PecM-related protein DR1295, 302 aa; fasta scores: opt: 769 z-score: 839.6 E(): 0; 47.1% identity in 291 aa overlap. Contains Pfam match to entry PF00892 DUF6, Integral membrane protein. Contains also possible hydrophobic membrane spanning regions putative integral membrane protein	Residues 5 to 299 of 299 are 99 pct identical to residues 1 to 295 of a 295 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286577.1 putative transmembrane subunit	Putative membrane protein	Putative uncharacterized protein	Similar to probable membrane protein YbiF of Escherichia coli	Probable integral membrane protein	putative permease	
ECOLI00773	Outer membrane protein X	Outer membrane protein X precursor	Outer membrane protein	Outer membrane protein X	Residues 3 to 173 of 173 are 100 pct identical to residues 1 to 171 of a 171 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286578.1 outer membrane protein X	Putative outer membrane protein	IPR000758: Virulence-related outer membrane protein outer membrane protease, receptor for phage OX2	similar to Salmonella typhi CT18 outer membrane protein x precursor outer membrane protein x precursor	Putative outer membrane protein	Outer membrane protease, receptor for phage OX2	Code: M; COG: COG3637 outer membrane protein X	Code: M; COG: COG3637 outer membrane protein X	Code: M; COG: COG3637 outer membrane protein X	Outer membrane protein X	Outer membrane protein X	Outer membrane protein precursor	Outer membrane protein precursor	outer membrane protein X Code: M; COG: COG3637	Outer membrane protein precursor	outer membrane protein X precursor	Virulence-related outer membrane protein precursor	Outer membrane protein X	Putative uncharacterized protein	Outer membrane protein X	Virulence-related outer membrane protein precursor	Outer membrane protein	Outer membrane protein X	Outer membrane protein X	Virulence-related outer membrane protein precursor	
ECOLI00774	UPF0141 inner membrane protein ybiP	Putative membrane protein	Hypothetical protein ybiP	Putative Dca	Putative enzyme	Residues 1 to 527 of 527 are 99 pct identical to residues 1 to 527 of a 527 aa protein from Escherichia coli K12 ref: NP_415336.1 putative enzyme	Similar to probable membrane protein YbiP of Escherichia coli	putative Integral membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Similar to: HI1005, YA05_HAEIN predicted PE--lipooligosaccharide phosphorylethanolamine transferase	Putative integral membrane protein	conserved hypothetical protein	Best Blastp Hit: gb|AAF12796.1|AF195057_1 (AF195057) DcaA [Neisseria gonorrhoeae] COG2194 Predicted membrane-associated division cell wall protein	Code: R; COG: COG2194 putative enzyme	Code: R; COG: COG2194 putative enzyme	Code: R; COG: COG2194 putative enzyme	Putative membrane protein YbiP	Putative uncharacterized protein ybiP	putative enzyme Code: R; COG: COG2194	hypothetical protein YbiP	tRNA modification GTPase TrmE	Putative integral membrane protein	Sulfatase	Putative enzyme	Putative uncharacterized protein	Sulfatase family protein	Sulfatase	
ECOLI00776	Transcriptional regulator mntR	Putative uncharacterized protein	Toxin	Putative uncharacterized protein	Iron dependent repressor	Iron-dependent repressor	Mn-dependent transcriptional regulator	Putative uncharacterized protein PH1163	Putatuve iron dependent repressor	Iron dependent repressor	Iron-dependent repressor	Iron-dependent transcriptional repressor, putative	Transcriptional regulator mntR	Transcriptional regulator mntR	Probable iron-dependent repressor	Transcriptional regulator mntR	Transcriptional regulator mntR	Transcriptional regulator mntR	Transcriptional regulator mntR	identified by match to protein family HMM PF01325; match to protein family HMM PF02742 iron-dependent repressor family protein	Transcriptional regulator	PMID: 2116013 PMID: 1735717 PMID: 1502169 PMID: 1400485 best DB hits: BLAST: pir:A64819; hypothetical protein b0817 - Escherichia coli -----; E=2e-18 gb:AAG55189.1; AE005262_9 (AE005262) putative toxin [Escherichia; E=2e-18 pir:A82733; conserved hypothetical protein XF1013 [imported] -; E=1e-17 COG: ybiQ; COG1321 Mn-dependent transcriptional regulator; E=2e-19 PFAM: PF01325; Iron dependent repressor, N-te; E=5.1e-09 PF02742; Iron dependent repressor, meta; E=4.5e-09 putative toxin	Iron-dependent transcriptional repressor	transcriptional regulator (manganese transport regulator)	Transcriptional regulator mntR	CDS_ID OB1900 transcriptional regulator	hypothetical protein	Iron-dependent transcriptional regulator	Predicted iron-dependent transcription repressor	
ECOLI00777	Inner membrane protein ybiR	Di-and tricarboxylate transporter	Putative uncharacterized protein PH0816	Membrane protein, putative	Possible transport protein	Di-or tricarboxylate transporter	Putative membrane protein	Putative transporter	Arsenical pump membrane protein	Possible transporter	Hypothetical protein ybiR	Transporter, putative	Putative uncharacterized protein ybiR	Residues 1 to 372 of 372 are 98 pct identical to residues 1 to 372 of a 372 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286582.1 orf, conserved hypothetical protein	Putative di-and tricarboxylate transporters transmembrane protein	arsenite efflux membrane component-like protein	conserved gene arsenite efflux protein ArsB	arsenite efflux membrane component-like protein	Cation transport protein	Probable membrane anion transport protein	cation transporter	Cation transporter	putative Di-and tricarboxylate transporters	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative transporter	Similar to Q8PY17 Arsenite permease from Methanosarcina mazei (420 aa). FASTA: opt: 1294 Z-score: 1359.3 E(): 8e-68 Smith-Waterman score: 1294; 49.144 identity in 409 aa overlap. ORF ftt0853 arsenite permease family protein	Putative di-and tricarboxylate transporters	possible transporter	Code: P; COG: COG0471 conserved hypothetical protein	
ECOLI00778	Uncharacterized protein ybiS	Putative exported protein	Protein ybiS precursor	Putative exported protein	PROTEIN ERFK/SRFK	Uncharacterized protein ybiS	Residues 1 to 306 of 306 are 99 pct identical to residues 1 to 306 of a 306 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286583.1 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative periplasmic protein	ortholog to E. coli bnum: b0819; in-frame premature UAG termination codon is located within the ybiS sequence, and a +1 frameshift would be required for synthesis of ybiS; RNA polymerase or ribosomal slippage; possible young pseudogene putative exported protein	Code: S; COG: COG1376 conserved hypothetical protein	Code: S; COG: COG1376 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG1376; orf conserved hypothetical protein	Putative periplasmic protein	Protein YbiS	conserved hypothetical protein identified by match to protein family HMM PF03734	ErfK/YbiS/YcfS/YnhG family protein	conserved hypothetical protein Code: S; COG: COG1376	conserved hypothetical protein	ErfK/YbiS/YcfS/YnhG family protein precursor	ErfK/YbiS/YcfS/YnhG family protein precursor	ErfK/YbiS/YcfS/YnhG family protein precursor	ErfK/YbiS/YcfS/YnhG family protein precursor	PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein KEGG: shw:Sputw3181_0871 ErfK/YbiS/YcfS/YnhG family protein ErfK/YbiS/YcfS/YnhG family protein	Putative uncharacterized protein ybiS	Putative uncharacterized protein	YbiS protein	
ECOLI00779	Uncharacterized ABC transporter ATP-binding protein ybiT	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	Probable ABC transporter	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Probable ATP-binding component of ABC transporter	ABC-type transport system, ATPase component	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Probable ABC transporter, ATP-binding protein	Lmo1431 protein	ABC transporter ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Putative ABC transport system, ATP-binding protein	putative ABC transporter, ATP-binding protein	Hypothetical ABC transporter ATP-binding protein ybiT	ABC transporter, ATP-binding protein	identified by match to protein family HMM PF00005 ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Probable ATP-binding ABC transporter protein	Probable ATP-binding ABC transporter protein	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Probable ATP-binding ABC transporter protein	
ECOLI00780	Uncharacterized protein ybiU	some similarities with wi|NCU02600.1 Neurospora crassa NCU02600.1 hypothetical protein, hypothetical start	DEHA2B00352p;weakly similar to CA2831|IPF15706 Candida albicans;	Putative uncharacterized protein STY0880	Putative uncharacterized protein	conserved hypothetical protein	Putative dioxygenase	Putative uncharacterized protein ybiU	Residues 3 to 423 of 423 are 99 pct identical to residues 1 to 421 of a 421 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286585.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	protein of unknown function DUF1479	orf conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein identified by match to protein family HMM PF07350	Hypothetical protein	protein of unknown function DUF1479 PFAM: protein of unknown function DUF1479 KEGG: bur:Bcep18194_B2144 protein of unknown function DUF1479	Hypothetical protein	protein of unknown function DUF1479 PFAM: protein of unknown function DUF1479 KEGG: bcn:Bcen_4425 protein of unknown function DUF1479	Putative uncharacterized protein	conserved hypothetical protein identified by match to protein family HMM PF07350	dioxygenase, putative	Hypothetical protein	
ECOLI00781	Sugar phosphatase supH	Phosphoglycolate phosphatase	Predicted hydrolase	Putative uncharacterized protein STY0881	Lmo0420 protein	Hypothetical protein ybiV	Cof family protein	Predicted hydrolase of the HAD superfamily	Putative uncharacterized protein	similar to AX065871-1|CAC26175.1| percent identity: 68 in 272 aa conserved hypothetical protein	Predicted hydrolase of the HAD superfamily	Lin0440 protein	Residues 1 to 271 of 271 are 99 pct identical to residues 1 to 271 of a 271 aa protein from Escherichia coli K12 ref: NP_415343.1 orf, conserved hypothetical protein	conserved hypothetical protein	Hypothetical protein SE2075	hypothetical protein	IPR000150: Cof protein putative hydrolase of the HAD superfamily	similar to Salmonella typhimurium putative hydrolase of the HAD superfamily putative hydrolase of the HAD superfamily	Putative uncharacterized protein gbs1172	conserved hypothetical protein	identified by match to PFAM protein family HMM PF00702 hydrolase, haloacid dehalogenase-like family	Ortholog of S. aureus MRSA252 (BX571856) SAR2607 putative haloacid dehalogenase-like hydrolase	identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484 Cof-like hydrolase	Conserved hypothetical protein	hydrolase (HAD superfamily)	Putative hydrolase of the HAD superfamily	similar to unknown protein	Similar to Escherichia coli hypothetical protein YbjI SW:YBJI_ECOLI (P75809) (271 aa) fasta scores: E(): 6.3e-28, 36.7% id in 267 aa, and to Escherichia coli hypothetical protein YbiV SW:YBIV_ECOLI (P75792) (271 aa) fasta scores: E(): 1.3e-26, 36.84% id in 266 aa putative haloacid dehalogenase-like hydrolase	HAD-superfamily hydrolase subfamily IIB	
ECOLI00782	Putative formate acetyltransferase 3	Putative formate acetyltransferase 3	Putative formate acetyltransferase 3	Putative formate acetyltransferase	Putative pyruvate formate-lyase	Formate acetyltransferase	Putative pyruvate formate lyase	Putative pyruvate formate-lyase 2	Residues 1 to 810 of 810 are 99 pct identical to residues 1 to 810 of a 810 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286587.1 Pyruvate-formate lyase	Formate C-acetyltransferase	Formate acetyltransferase	IPR001150: Formate C-acetyltransferase glycine radical putative pyruvate formate lyase	similar to Salmonella typhi Ty2 putative formate acetyltransferase 3 putative formate acetyltransferase 3	Putative uncharacterized protein gbs0319	identified by match to PFAM protein family HMM PF01228 formate acetyltransferase	Putative pyruvate formate-lyase 2	best blastp match gb|AAK34714.1| (AE006625) putative pyruvate formate-lyase 2 [Streptococcus pyogenes M1 GAS] putative pyruvate formate-lyase 2	Putative Formate acetyltransferase 3	Putative pyruvate formate lyase	identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01774 formate acetyltransferase 2	formate acetyltransferase	Code: C; COG: COG1882 putative formate acetyltransferase	Code: C; COG: COG1882 putative formate acetyltransferase	Formate acetyltransferase	Formate acetyltransferase	Code: C; COG: COG1882 putative formate acetyltransferase	formate acetyltransferase	Putative formate acetyltransferase 3	Putative formate acetyltransferase 3	
ECOLI00783	Putative pyruvate formate-lyase 3-activating enzyme	Putative pyruvate formate-lyase 3 activating enzyme	Putative pyruvate formate-lyase-activating enzyme	Pyruvate formate-lyase activating enzyme, putative	Pyruvate formate-lyase	Putative pyruvate formate-lyase activating enzyme	Putative pyruvate formate-lyase 3 activating enzyme	Putative pyruvate formate-lyase 2 activating enzyme	Residues 1 to 308 of 308 are 98 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli K12 ref: NP_415345.1 putative pyruvate formate-lyase 2 activating enzyme	IPR001989: Radical-activating enzyme putative pyruvate formate lyase activating enzyme	similar to Salmonella typhi Ty2 putative pyruvate formate-lyase 3 activating enzyme putative pyruvate formate-lyase 3 activating enzyme	Putative uncharacterized protein gbs0313	identified by match to PFAM protein family HMM PF02143 pyruvate formate-lyase-activating enzyme	Putative Pyruvate formate-lyase 3	Putative pyruvate formate lyase activating enzyme	identified by similarity to SP:Q46267; match to protein family HMM PF04055; match to protein family HMM TIGR02494 pyruvate formate-lyase-activating enzyme, putative	Code: O; COG: COG1180 putative pyruvate formate-lyase 2 activating enzyme	Code: O; COG: COG1180 putative pyruvate formate-lyase 2 activating enzyme	Code: O; COG: COG1180 putative pyruvate formate-lyase 2 activating enzyme	Putative pyruvate formate-lyase 3 activating enzyme	Putative pyruvate formate-lyase 3 activating enzyme	pyruvate formate-lyase 2-activating enzyme identified by match to protein family HMM PF04055; match to protein family HMM TIGR02494	Putative pyruvate formate-lyase 3 activating enzyme	Pyruvate formate-lyase 3, putative	Glycyl-radical enzyme activating protein family	putative pyruvate formate-lyase 2 activating enzyme Code: O; COG: COG1180	glycyl-radical enzyme activating protein family protein equivalent gene in S.pneumoniae TIGR4 = SP0245; equivalent gene in S.pneumoniae R6 = spr0226; identified by match to protein family HMM PF04055; match to protein family HMM TIGR02494	putative pyruvate formate lyase activating enzyme	Putative pyruvate formate-lyase 3 activating enzyme	
ECOLI00784	Fructose-6-phosphate aldolase 1	Fructose-6-phosphate aldolase 1	Putative transaldolase-like protein	Putative transaldolase	Fructose-6-phosphate aldolase 1	Residues 1 to 244 of 244 are 98 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli K12 ref: NP_415346.1 putative transaldolase	Transaldolase	Putative uncharacterized protein gbs0320	identified by match to PFAM protein family HMM PF00923 transaldolase family protein	Putative transaldolase-like protein	best blastp match gb|AAK34713.1| (AE006625) putative transaldolase-like protein [Streptococcus pyogenes M1 GAS] putative transaldolase-like protein	Putative Transaldolase C	identified by match to protein family HMM PF00923 transaldolase, putative	transaldolase	Code: G; COG: COG0176 putative transaldolase	Code: G; COG: COG0176 putative transaldolase	Transaldolase	Transaldolase	Transaldolase COG0176 [G] Transaldolase	Code: G; COG: COG0176 putative transaldolase	transaldolase	Probable fructose-6-phosphate aldolase	Transaldolase-like protein	Transaldolase	transaldolase, putative identified by match to protein family HMM PF00923; match to protein family HMM TIGR00875	Putative transaldolase	Transaldolase-like protein, putative	Complete genome	putative transaldolase Code: G; COG: COG0176	
ECOLI00785	Molybdopterin biosynthesis protein moeB	ThiF family protein	similarity to HYPOTHETICAL PROTEIN YABA_SCHPO;03_1290, similarity to HYPOTHETICAL PROTEIN YABA_SCHPO, gene found by Glimmer;	Molybdenum cofactor biosynthesis protein	Molybdopterin biosynthesis protein moeB	MoeB	Molybdopterin biosynthesis MoeB protein	Molybdopterin biosynthesis protein MoeB	Molybdopterin biosynthesis MoeB protein	Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2	Putative molybdopterin biosynthesis protein	Putative molybdopterin biosynthesis MoeB protein	Molybdopterin biosynthesis protein moeB	Molybdopterin biosynthesis MoeB protein	Adenylyltransferase	Adenylyltransferase	Molybdopterin biosynthesis MoeB protein	Molybdopterin biosynthesis protein	Molybdopterin biosynthesis protein	Molybdopterin biosynthesis protein MoeB	Adenylyltransferase	HesA/MoeB/ThiF family protein	Molybdopterin biosynthesis MoeB protein	Putative molybdopterin biosynthesis protein	Molybdopterin biosynthesis	Dinucleotide-utilizing enzymes	Residues 1 to 249 of 249 are 99 pct identical to residues 1 to 249 of a 249 aa protein from Escherichia coli K12 ref: NP_415347.1 molybdopterin biosynthesis	Molybdopterin biosynthesis protein	Putative thif transmembrane protein	
ECOLI00786	Molybdopterin biosynthesis protein moeA	Molybdopterin biosynthesis protein	Molybdopterin biosynthesis protein moeA	Molybdopterin biosynthesis protein MoeA	Molybdenum cofactor biosynthesis protein	Molybdopterin biosynthesis protein moeA	Molybdopterin biosynthesis enzyme	Putative molybdopterin biosynthesis protein	Molybdenum cofactor biosynthesis protein	Molybdopterin biosynthesis MoeA protein	Molybdenum cofactor biosynthesis protein	Molybdenum cofactor biosynthesis family protein	MoeA	Putative molybdopterin biosynthesis protein	Molybdopterin biosynthesis enzyme	Molybdopterin biosynthesis moeA protein	Molybdopterin biosynthesis MoeA protein	Probable molybdopterin biosynthesis protein	Molybdopterin biosynthesis enzyme	Putative molybdopterin biosynthesis protein	Putative molybdopterin biosynthesis protein MoeA	Molybdopterin biosynthesis protein moeA	Molybdopterin biosynthesis MoeA protein	Molybdopterin biosynthesis protein	Molybdopterin biosynthesis protein	Molybdopterin biosynthesis MoeA protein	Molybdopterin biosynthesis protein	Molybdenum cofactor biosynthesis protein	Molybdopterin biosynthesis protein	
ECOLI00787	Isoaspartyl peptidase	Putative L-asparaginase [Source:GeneDB_Spombe;Acc:SPAC823.09c]	Asparaginase	Asparinase, putative	Vng1872c	Putative L-asparaginase	L-asparaginase	L-asparaginase related protein	Putative L-asparaginase	hypothetical L-asparaginase	Asparaginase	Asparaginase family protein	Asparaginase	Asparaginase	Putative L-asparaginase	Asparaginase	Putative L-asparaginase	asparaginase family protein	Asparaginase family protein	Asparaginase, putative	Putative L-asparaginase	Putative L-asparaginase	L-asparaginase	Putative L-asparaginase	Asparaginase family protein	Putative asparaginase	Putative asparaginase	Putative uncharacterized protein	Asparaginase	
ECOLI00788	Glutathione import ATP-binding protein gsiA	Dipeptide/oligopeptide transporter, ATP-binding protein	ABC transporter, ATP binding component, possibly for oligopeptides	Glutathione import ATP-binding protein gsiA	Putative ATP-binding ABC transporter protein	Glutathione import ATP-binding protein gsiA	Putative ABC transporter ATP-binding subunit	Putative ABC transporter ATP-binding subunit	Glutathione import ATP-binding protein gsiA	Putative ABC transporter ATP-binding subunit	Putative dipeptide ABC transporter, ATP-binding protein	Glutathione import ATP-binding protein gsiA	Residues 1 to 629 of 629 are 98 pct identical to residues 31 to 659 of a 659 aa protein from Escherichia coli dbj: BAA35517.1 orf, conserved hypothetical protein	Oligopeptide transport ATP-binding protein	Probable atp-binding abc transporter protein	identified by match to protein family HMM PF00005 peptide/nickel/opine uptake family ABC transporter, ATP-binding protein, putative	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ATPase components of ABC-type transport system, contain duplicated ATPase domain	similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein hypothetical ABC transporter ATP-binding protein	oligopeptide transport ATP-binding protein	ABC transporter, ATP-binding protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0198 ABC transporter ATP-binding protein	oligopeptide transport ATP-binding protein	Glutathione import ATP-binding protein gsiA	Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal	Similar to Rhizobium meliloti probable ABC transporter, ATP-binding protein SMA1434 TR:AAK65441 (EMBL:AE007265) (550 aa) fasta scores: E(): 3.9e-76, 44.318% id in 528 aa, and to Rhizobium loti peptide ABC transporter, ATP-binding protein MLL5490 TR:BAB51933 (EMBL:AP003006) (543 aa) fasta scores: E(): 6.8e-72, 43.289% id in 529 aa. Similar to SAR0951, 50.763% identity (50.763% ungapped) in 262 aa overlap ABC transporter ATP-binding protein	Code: R; COG: COG1123 putative ATP-binding component of a transport system	identified by match to protein family HMM PF00005 peptide ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	ABC peptide transporter, fused ATPase domains	
ECOLI00789	Glutathione-binding protein gsiB	Glutathione-binding protein gsiB	Putative ABC transporter substrate-binding protein	Glutathione-binding protein gsiB precursor	Putative binding-protein-dependent transport periplasmic protein	Putative binding-protein-dependent transport periplasmic protein	Glutathione-binding protein gsiB	Putative binding-protein-dependent transport periplasmic protein	Putative dipeptide ABC transporter periplasmic dipeptide-binding protein	Glutathione-binding protein gsiB	Residues 1 to 564 of 564 are 99 pct identical to residues 35 to 598 of a 598 aa protein from Escherichia coli dbj: BAA35525.1 Heme-binding protein a precursor (hemin-binding lipoprotein).	Probable substate-binding periplasmic (Pbp) abc transporter protein	IPR000914: Bacterial extracellular solute-binding protein, family 5 putative ABC transporter periplasmic binding protein	similar to Salmonella typhi CT18 putative ABC transporter periplasmic binding protein putative ABC transporter periplasmic binding protein	Glutathione-binding protein gsiB	Code: E; COG: COG0747 putative transport protein	Code: E; COG: COG0747 putative transport protein	Code: E; COG: COG0747 putative transport protein	Extracellular solute-binding protein, family 5 precursor	putative ABC transporter substrate-binding protein identified by match to protein family HMM PF00496	Glutathione-binding protein gsiB	Glutathione-binding protein gsiB	extracellular solute-binding protein, family 5	extracellular solute-binding protein, family 5 PFAM: extracellular solute-binding protein, family 5 KEGG: bur:Bcep18194_B1867 ABC dipeptide/oligopeptide/nickel family transporter, periplasmic ligand binding protein	extracellular solute-binding protein, family 5	extracellular solute-binding protein, family 5 PFAM: extracellular solute-binding protein, family 5 KEGG: pol:Bpro_0139 extracellular solute-binding protein, family 5	Extracellular solute-binding protein, family 5 precursor	extracellular solute-binding protein, family 5 PFAM: extracellular solute-binding protein, family 5 KEGG: bcn:Bcen_4203 extracellular solute-binding protein, family 5	ABC peptide transporter, periplasmic ligand binding protein	
ECOLI00790	Glutathione transport system permease protein gsiC	Glutathione transport system permease protein gsiC	Putative ABC transport permease	Glutathione transport system permease protein gsiC	Putative binding-protein-dependent transport permease	Putative binding-protein-dependent transport permease	Glutathione transport system permease protein gsiC	Putative binding-protein-dependent transport permease	Putative dipeptide ABC transporter, permease protein	Glutathione transport system permease protein gsiC	Residues 1 to 306 of 306 are 99 pct identical to residues 1 to 306 of a 306 aa protein from Escherichia coli K12 ref: NP_415352.1 putative transport system permease protein	Probable transmembrane abc transporter protein	IPR000515: Binding-protein-dependent transport systems inner membrane component putative ABC transporter periplasmic binding protein	similar to Salmonella typhi CT18 hypothetical ABC transporter permease protein hypothetical ABC transporter permease protein	Glutathione transport system permease protein gsiC	Binding-protein-dependent transport systems inner membrane component	Code: EP; COG: COG0601 putative transport system permease protein	Code: EP; COG: COG0601 putative transport system permease protein	ABC transporter permease protein	ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit	Code: EP; COG: COG0601 putative transport system permease protein	Binding-protein-dependent transport systems inner membrane component precursor	ABC transporter permease protein identified by match to protein family HMM PF00528	Glutathione transport system permease protein gsiC	binding-protein-dependent transport systems inner membrane component	Glutathione transport system permease protein gsiC	binding-protein-dependent transport systems inner membrane component	binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component KEGG: bur:Bcep18194_B1866 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit	binding-protein-dependent transport systems inner membrane component	
ECOLI00791	Glutathione transport system permease protein gsiD	Oligopeptide transport system permease protein oppC	Binding protein-dependent transport system, inner membrane component	Glutathione transport system permease protein gsiD	Oligopeptide ABC transporter, oligopeptide- binding protein	Oligopeptide transport system, permease	Putative ABC transport system permease protein	Glutathione transport system permease protein gsiD	ABC-type dipeptide/oligopeptide system, permease	Putative binding-protein-dependent transport permease	Putative binding-protein-dependent transport permease	Glutathione transport system permease protein gsiD	Putative binding-protein-dependent transport permease	Putative dipeptide ABC transporter, permease protein	Oligopeptide ABC transporter permease protein	Glutathione transport system permease protein gsiD	CDS_ID OB3067 oligopeptide ABC transporter permease	Oligopeptide ABC transporter	Residues 1 to 303 of 303 are 99 pct identical to residues 1 to 303 of a 303 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286596.1 putative transport system permease protein	Putative uncharacterized protein	Probable transmembrane abc transporter protein	oligopeptide ABC transporter permease	IPR000515: Binding-protein-dependent transport systems inner membrane component putative ABC transporter inner membrane component	similar to Salmonella typhi CT18 hypothetical ABC transporter permease protein hypothetical ABC transporter permease protein	hypothetical protein, similar to dipeptide transporter protein dppC	Ortholog of S. aureus MRSA252 (BX571856) SAR0200 putative transport system permease	hypothetical protein, similar to dipeptide transporter protein dppC	Glutathione transport system permease protein gsiD	oligopeptide ABC transporter, permease	
ECOLI00792	Uncharacterized protein yliE	Hypothetical protein yliE	GGDEF family protein	Putative uncharacterized protein	sensory box/GGDEF family protein	predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain COG5001	Putative uncharacterized protein	GGDEF domain	Putative uncharacterized protein yliE	conserved hypothetical protein	Diguanylate cyclase/phosphodiesterase precursor	conserved hypothetical protein YliE	Diguanylate cyclase/phosphodiesterase	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Conserved inner membrane protein	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Diguanylate phosphodiesterase precursor	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Diguanylate cyclase	Sensory box/ggdef family protein	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Putative uncharacterized protein	Putative uncharacterized protein yliE	Putative uncharacterized protein yliE	Putative uncharacterized protein yliE	Putative uncharacterized protein yliE	Putative uncharacterized protein yliE	Signal transduction protein containing a membrane domain an EAL and a GGDEF domain	
ECOLI00793	Uncharacterized membrane protein yliF	Uncharacterized membrane protein yliF	Residues 1 to 442 of 442 are 99 pct identical to residues 1 to 442 of a 442 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286598.1 orf, conserved hypothetical protein	Code: T; COG: COG2199 conserved hypothetical protein	Hypothetical membrane protein YliF	Hypothetical membrane protein YliF	conserved hypothetical protein	predicted diguanylate cyclase	Putative uncharacterized protein	Diguanylate cyclase	Predicted diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase precursor	Diguanylate cyclase	Diguanylate cyclase	Putative uncharacterized protein	Putative diguanylate cyclase	Putative diguanylate cyclase	Putative diguanylate cyclase	Putative diguanylate cyclase	Putative diguanylate cyclase	Predicted diguanylate cyclase	Putative diguanylate cyclase	YliF protein	Predicted diguanylate cyclase	Diguanylate cyclase	Predicted diguanylate cyclase	predicted diguanylate cyclase	Diguanylate cyclase	
ECOLI00794	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	2-methylthioadenine synthetase	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Hypothetical protein yliG	identified by match to PFAM protein family HMM PF00919 conserved hypothetical protein TIGR01125	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	Ribosomal protein S12 methylthiotransferase rimO	
ECOLI00795	Biofilm regulator bssR	Hypothetical protein yliH	Biofilm regulator bssR	Residues 1 to 128 of 128 are 99 pct identical to residues 1 to 128 of a 128 aa protein from Escherichia coli K12 gi: 1787059 putative receptor	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	putative receptor	putative receptor	Putative cytoplasmic protein YliH	Putative uncharacterized protein yliH	putative receptor	conserved hypothetical protein YliH	Putative cytoplasmic protein	Putative receptor	Putative uncharacterized protein	Biofilm regulator BssR	Regulator of biofilm formation	Biofilm regulator BssR	Putative receptor	Biofilm regulator BssR	Putative uncharacterized protein	Putative uncharacterized protein	Biofilm regulator BssR	Putative uncharacterized protein	Biofilm regulator BssR	Biofilm regulator BssR	Biofilm regulator BssR	Putative uncharacterized protein yliH	Biofilm regulator BssR	
ECOLI00797	Uncharacterized GST-like protein yliJ	Glutathione S-transferase	Glutathione S-transferase family protein	Probable glutathione S-transferase	Glutathione s-transferase family protein	Putative glutathione S-transferase	Hypothetical GST-like protein yliJ	identified by match to TIGR protein family HMM TIGR01262 glutathione S-transferase domain protein	Probable glutathione S-transferase	Probable glutathione S-transferase	Putative glutathione S-transferase	glimmer prediction; global similarity to GstA from R. leguminosarum which is a putative glutathione-S-transferase (GI: 1050750); Pfam global domain homology to Glutathione-S-transferases putative Gst12 glutathione-S-transferase	Glutathione S-transferase family protein	Probable glutathione S-transferase	Putative transferase	Glutathione S-transferase	Residues 1 to 210 of 210 are 99 pct identical to residues 1 to 210 of a 210 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286604.1 putative transferase	Putative glutathione S-transferase-family protein	Probable glutathione s-transferase protein	Similar to glutathione S-transferase YliJ of Escherichia coli	IPR004045: Glutathione S-transferase, N-terminal; IPR004046: Glutathione S-transferase, C-terminal putative glutathione S-transferase	similar to Salmonella typhi CT18 glutathione s-transferase family protein glutathione s-transferase family protein	Glutathione S-transferase	Putative glutathione S-transferase-family protein	Glutathione S-transferase family protein	Putative glutathione S-transferase	glutathione S-transferase	identified by match to protein family HMM PF00043; match to protein family HMM PF02798 glutathione S-transferase family protein	identified by match to protein family HMM PF00043; match to protein family HMM PF02798 glutathione S-transferase	
ECOLI00796	Soluble aldose sugar dehydrogenase yliI	Putative oxidoreductase	Putative uncharacterized protein	Putative uncharacterized protein	Putative glucose dehydrogenase-B	Putative uncharacterized protein	Glucose dehydrogenase	Putative oxidoreductase	hypothetical glucose dehydrogenase	Hypothetical protein yliI	quinoprotein glucose dehydrogenase	pseudo	Putative exported protein	Putative exported protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Putative exported protein	Putative glucose dehydrogenase-B	Putative dehydrogenase	Glucose/sorbosone dehydrogenase	Putative uncharacterized protein	Residues 1 to 312 of 312 are 99 pct identical to residues 1 to 312 of a 371 aa protein from Escherichia coli K12 ref: NP_415358.1 putative dehydrogenase	identified by similarity to GB:CAC46907.1 conserved hypothetical protein	Glucose dehydrogenase B protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark dehydrogenase	Putative oxidoreductase	similar to Salmonella typhi Ty2 putative oxidoreductase putative oxidoreductase	Dehydrogenase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative glucose dehydrogenase precursor	
ECOLI00798	D-alanyl-D-alanine carboxypeptidase dacC	Penicillin-binding protein 6	D-alanyl-D-alanine carboxypeptidase	Lmo2754 protein	Penicillin-binding protein 6	similar to GP:15157488; identified by sequence similarity; putative D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein 6	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PENICILLIN-BINDING PRECURSOR (D-ALANYL-D-ALANINE CARBOXYPEPTIDASE FRACTION A) TRANSMEMBRANE PROTEIN	serine-type D-Ala-D-Ala carboxypeptidase	Putative D,D-carboxypeptidase, penicillin-binding protein	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE	Putative D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein	Putative peptidoglycan synthesis related protein	D-alanyl-D-alanine carboxypeptidase; penicillin- binding protein 6	Penicillin binding protein	D-alanyl-D-alanine endopeptidase	PENICILLIN-BINDING PROTEIN DACF	Residues 8 to 331 of 338 are 98 pct identical to residues 1 to 327 of a 400 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286605.1 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6	D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase fraction C) (DD-pept	Similar to penicillin-binding protein precursor (D-alanyl-D-alaninecarboxypeptidase fraction C) hypothetical protein	conserved gene D-alanyl-D-alanine carboxypeptidase	Similar to penicillin-binding protein precursor (D-alanyl-D-alaninecarboxypeptidase fraction C) hypothetical protein	Serine-type D-Ala-D-Ala carboxypeptidase	D-alanyl-D-alanine carboxypeptidase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark penicillin-binding protein 6	serine-type D-Ala-D-Ala carboxypeptidase d-alanyl-d-alanine carboxypeptidase	D-alanyl-D-alanine carboxypeptidase	IPR001967: Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a	
ECOLI00799	Deoxyribose operon repressor	Transcriptional regulator, DeoR family	Deoxyribose operon repressor	Deoxyribose operon repressor	Deoxyribose operon repressor	Product confidence : putative Gene name confidence : putative putative transcriptional regulator, deoR family protein	Deoxyribose operon repressor	deoxyribose operon repressor	Residues 1 to 252 of 252 are 99 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286606.1 transcriptional repressor for deo operon, tsx, nupG	Deoxyribose operon repressor	IPR001034: Bacterial regulatory protein, DeoR family transcriptional repressor for deoxyribose operon (DeoR family)	similar to Salmonella typhi CT18 deoxyribose operon repressor deoxyribose operon repressor	Deoxyribose operon repressor	Transcriptional repressor for deoxyribose operon	regulatory protein, DeoR	Code: KG; COG: COG1349 transcriptional repressor for deo operon, tsx, nupG	transcriptional regulator, DeoR family	transcriptional repressor for deo operon, tsx, nupG; Code: KG; COG: COG1349 DeoR	deoxyribose operon repressor	transcriptional regulator, DeoR family	Code: KG; COG: COG1349 transcriptional repressor for deo operon, tsx, nupG	Transcriptional regulator, DeoR family	Transcriptional Regulator, DeoR family	Transcriptional repressor for deoxyribose operon	Deoxyribose operon repressor	DeoR transcriptional repressor	Deoxyribose operon repressor	Deoxyribose operon repressor	transcriptional regulator, DeoR family PFAM: regulatory protein, DeoR KEGG: bcn:Bcen_1542 transcriptional regulator, DeoR family	
ECOLI00800	Putative undecaprenyl-diphosphatase ybjG	Putative integral membrane protein	Putative uncharacterized protein	PA-phosphatase related phosphoesterase	Putative uncharacterized protein CPE0797	Putative permease protein	PAP2 family protein	Bacitracin transport permease protein BCRC	Putative transport-related membrane protein	Hypothetical protein ybjG	PAP2 family protein	Putative uncharacterized protein ybjG	hypothetical protein	BH2687 protein	SCD72A.19, possible integral membrane protein, len: 238aa; N-terminal region similar to others eg. TR:O86625 (EMBL:AL031155) putative integral membrane protein from Streptomyces coelicolor (201 aa) fasta scores; opt: 321, z-score: 379.3, E(): 1.1e-13, 35.8% identity in 179 aa overlap. Contains possible membrane-spanning hydrophobic regions and Pfam match to entry PF01569 PAP2, PAP2 superfamily putative integral membrane protein	hypothetical protein	Residues 6 to 203 of 203 are 99 pct identical to residues 1 to 198 of a 198 aa protein from Escherichia coli K12 ref: NP_415362.1 orf, conserved hypothetical protein	Putative permease	Putative transport transmembrane protein	Similar to probable bacitracin transport permease YbjG of Escherichia coli	Probable permease protein	bacteriocin transport permease	IPR000326: PA-phosphatase related phosphoesterase putative permease	similar to Salmonella typhi CT18 putative permease protein putative permease protein	Putative uncharacterized protein	Putative permease	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative membrane protein	Putative permease	identified by match to protein family HMM PF01569 phosphatidylglycerophosphatase B-related protein	
ECOLI00801	Multidrug translocase mdfA	Multidrug translocase MdfA	Multidrug translocase mdfA	Major facilitator superfamily protein	Multidrug translocase mdfA	Residues 1 to 408 of 408 are 99 pct identical to residues 1 to 410 of a 410 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286608.1 proton motive force efflux pump	Multidrug translocase	similar to multidrug translocase hypothetical protein	conserved gene multidrug translocase MdfA, chloramphenicol resistance pump Cmr	similar to multidrug translocase hypothetical protein	IPR005829: Sugar transporter superfamily; IPR007114: Major facilitator superfamily multidrug translocase	similar to Salmonella typhi CT18 multidrug translocase MdfA multidrug translocase MdfA	Multidrug translocase, MFS family	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter multidrug/chloramphenicol efflux transport protein (MFS superfamily)	Multidrug efflux MFS transporter, putative	Multidrug translocase	Code: GEPR; COG: COG0477 proton motive force efflux pump	Major facilitator superfamily MFS_1	Multidrug translocase MmdfA	Multidrug translocase	MdfA/Cmr MFS multidrug transporter	Multidrug translocase	Multidrug translocase precursor	putative multidrug efflux MFS transporter Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	Multidrug efflux transport protein	proton motive force efflux pump Code: GEPR; COG: COG0477	Multidrug translocase	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: dvu:DVUA0096 major facilitator superfamily protein	proton motive force efflux pump	
ECOLI00802	Uncharacterized protein ybjH	Putative uncharacterized protein ybjH	Residues 1 to 94 of 94 are 100 pct identical to residues 1 to 94 of a 94 aa protein from Escherichia coli K12 ref: NP_415364.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ybjH	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ybjH	Putative uncharacterized protein ybjH	Putative uncharacterized protein ybjH	Putative uncharacterized protein ybjH	Putative uncharacterized protein ybjH	Predicted protein	Putative uncharacterized protein ybjH	YbjH protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI00803	Phosphatase ybjI	Putative uncharacterized protein STY0900	Protein ybjI	Putative uncharacterized protein	Residues 1 to 272 of 272 are 98 pct identical to residues 1 to 272 of a 272 aa protein from Escherichia coli dbj: BAA35548.1 orf, conserved hypothetical protein	putative hydrolase	IPR000150: Cof protein putative hydrolase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	conserved Archaeal protein	Putative hydrolase	identified by sequence similarity; putative; ORF located using Glimmer;GeneMark; Blastx; COG0561 conserved hypothetical protein	Code: R; COG: COG0561 conserved hypothetical protein	Code: R; COG: COG0561 conserved hypothetical protein	Putative hydrolase YbjI of the HAD superfamily	Conserved protein with a phophatase-like domain	Putative hydrolase	conserved hypothetical protein Code: R; COG: COG0561	Predicted hydrolase of the HAD superfamily	conserved hypothetical protein with a phophatase-like domain	Predicted hydrolase of the HAD superfamily	Cof-like hydrolase	Conserved protein, phophatase-like domain	Putative uncharacterized protein	Phosphatase YbjI	Putative uncharacterized protein	Conserved protein	Phosphatase YbjI	Cof-like hydrolase	Phosphatase YbjI	
ECOLI00804	Inner membrane protein ybjJ	Putative membrane protein	Putative membrane protein	Hypothetical protein ybjJ	Putative transporter	Putative DEOR-type transcriptional regulator	Major facilitator superfamily permease	SCD65.05, possible integral membrane protein, len: 415 aa; similar to TR:P75810 (EMBL:AE000186) Escherichia coli MosC protein, 402 aa; fasta scores: opt: 1317 z-score: 1364.7 E(): 0; 54.1% identity in 392 aa overlap.  Contains possible hydrophobic membrane spanning regions putative integral membrane protein	Residues 1 to 402 of 402 are 99 pct identical to residues 1 to 402 of a 402 aa protein from Escherichia coli K12 ref: NP_415366.1 putative DEOR-type transcriptional regulator	IPR007114: Major facilitator superfamily putative transport protein/putative regulatorn	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative transport protein/putative regulator	Code: GEPR; COG: COG0477 putative DEOR-type transcriptional regulator	Code: GEPR; COG: COG0477 putative DEOR-type transcriptional regulator	Code: GEPR; COG: COG0477 putative DEOR-type transcriptional regulator	Putative membrane protein YbjJ	major facilitator superfamily MFS_1	Putative DEOR-type transcriptional regulator	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: sco:SCO4462 integral membrane protein	putative DEOR-type transcriptional regulator Code: GEPR; COG: COG0477	putative DEOR-type transcriptional regulator	Probable transporter, MFS superfamily protein	Putative major facilitator superfamily (MFS) transporter	sugar (and other) transporter	Major facilitator superfamily MFS_1 precursor	Putative DEOR-type transcriptional regulator	Putative uncharacterized protein	Transporter, major facilitator family	Major facilitator superfamily MFS_1 precursor	
ECOLI00805	Uncharacterized HTH-type transcriptional regulator ybjK	Hypothetical protein ybjK	TetR-family transcriptional regulator	Putative DEOR-type transcriptional regulator	Residues 1 to 188 of 188 are 97 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli dbj: BAA35550.1 orf, conserved hypothetical protein	IPR001647: Bacterial regulatory protein TetR, HTH motif paral putative regulator (TetR/Acr family)	similar to Salmonella typhi CT18 putative tetR-family transcriptional regulator putative tetR-family transcriptional regulator	Putative regulator	Code: S; COG: COG3226 putative DEOR-type transcriptional regulator	Code: S; COG: COG3226 putative DEOR-type transcriptional regulator	Code: S; COG: COG3226 putative DEOR-type transcriptional regulator	Hypothetical transcriptional regulator YbjK	Putative transcriptional regulator, TetR family	Putative DEOR-type transcriptional regulator	transcriptional regulator, TetR family identified by match to protein family HMM PF00440	putative transcriptional regulator, TetR family PFAM: regulatory protein, TetR KEGG: mmc:Mmcs_1824 putative transcriptional regulator, TetR family	putative DEOR-type transcriptional regulator Code: S; COG: COG3226	putative DEOR-type transcriptional regulator	putative transcriptional regulator, TetR family PFAM: regulatory protein, TetR KEGG: mmc:Mmcs_1824 putative transcriptional regulator, TetR family	Putative transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Putative DEOR-type transcriptional regulator	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Putative uncharacterized protein	
ECOLI00806	Putative transport protein ybjL	Putative transport protein VV1438	Putative transport protein ybjL	Conserved hypothetical protein	Putative transport protein ybjL	Putative transport protein VC_1145	Uncharacterized transporter SO_2143	Putative transport protein ECA2683	Putative transport protein VP1232	Putative transport protein ybjL	Putative transport protein VV1_2828	Residues 1 to 561 of 561 are 99 pct identical to residues 1 to 561 of a 561 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286613.1 putative transport protein	Putative transport protein YPO1326/y2857/YP_1266	aspartate alanine antiporter	putative transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative transport protein YPTB1357	integral membrane protein with TrkA domains	Similar to Q845W9 Aspartate:alanine antiporter from Pseudomonas dacunhae (561 aa). FASTA: opt: 1359 Z-score: 1502.2 bits: 287.8 E(): 8.8e-76 Smith-Waterman score: 1359; 38.351 identity in 558 aa overlap. ORF ftt0829c Aspartate:alanine antiporter	Putative transport protein ybjL	YidE/YbjL duplication	Code: R; COG: COG2985 putative transport protein	Code: R; COG: COG2985 putative transport protein	Putative aspartate:alanine antiporter	Code: R; COG: COG2985 putative transport protein	Putative transport protein ybjL	TrkA, Potassium channel-family protein	Aspartate:alanine antiporter Similar to Q845W9 Aspartate:alanine antiporter from Pseudomonas dacunhae (561 aa). FASTA: opt: 1359 Z-score: 1502.2 bits: 287.8 E(): 8.8e-76 Smith-Waterman score: 1359; 38.351 identity in 558 aa overlap. ORF ftt0829c	Putative transport protein ybjL	
ECOLI00807	Inner membrane protein ybjM	Hypothetical protein ybjM	Putative membrane protein	Inner membrane protein ybjM	Residues 1 to 125 of 125 are 99 pct identical to residues 1 to 125 of a 125 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286614.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative inner membrane protein YbjM	Putative uncharacterized protein ybjM	conserved hypothetical protein	conserved hypothetical protein YbjM	Putative inner membrane protein precursor	Putative uncharacterized protein ybjM	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein precursor	Predicted inner membrane protein	Putative membrane protein	Putative uncharacterized protein precursor	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	
ECOLI00808	Glutaredoxin-1	Grx	Glutaredoxin	Glutaredoxin-1	putative glutaredoxin 1	Glutaredoxin 1	Glutaredoxin	Glutaredoxin	Glutaredoxin 1	Glutaredoxin 1	Glutaredoxin1 redox coenzyme for glutathione- dependent ribonucleotide reductase	Glutaredoxin	Residues 6 to 90 of 90 are 100 pct identical to residues 1 to 85 of a 85 aa protein from Escherichia coli K12 ref: NP_415370.1 glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase	Glutaredoxin 1	Glutaredoxin 1	IPR002109: Glutaredoxin; IPR006663: Thioredoxin domain 2 glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase	similar to Salmonella typhi CT18 glutaredoxin 1 glutaredoxin 1	Glutaredoxin 1	glutaredoxin	Similar to: HI1532, GLRX_HAEIN glutaredoxin	Glutaredoxin and related proteins GrxC protein	Glutaredoxin	Glutaredoxin-1	glutaredoxin	Code: O; COG: COG0695 glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3530878; Product type c : carrier glutaredoxin 1 redox coenzyme for glutathione-dependent ribonucleotide reductase	glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase; Code: O; COG: COG0695 GrxA	glutaredoxin 1	Glutaredoxin, GrxA	
ECOLI00809	Uncharacterized protein ybjC	Hypothetical protein ybjC	Putative uncharacterized protein ybjC	Residues 1 to 95 of 95 are 98 pct identical to residues 1 to 95 of a 95 aa protein from Escherichia coli K12 ref: NP_415371.1 orf, conserved hypothetical protein	Putative membrane protein	Similarities with putative membrane protein YbjC of Escherichia coli	IPR002114: HPr serine phosphorylation site putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YbjC	Putative membrane protein	Putative uncharacterized protein ybjC	Membrane protein	Putative membrane protein	conserved hypothetical protein	Membrane protein	conserved hypothetical protein YbjC	Putative uncharacterized protein ybjC	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	
ECOLI00810	Oxygen-insensitive NADPH nitroreductase	Reductase, putative	Possible NADPH-flavin oxidoreductase; flavin reductase P; NADPH-Fmn oxidoreductase	Putative uncharacterized protein	Nitroreductase	Oxidoreductase, putative	Oxygen-insesitive NAD(P)H nitroreductase/dihydropteridine reductase	Oxygen-insensitive NADPH nitroreductase	Nitroreductase family protein	Lmo0936 protein	Nitroreductase	Putative oxidoreductase	Oxygen-insensitive NADPH nitroreductase	Possible oxygen-insensitive NADPH nitroreductase, nitroreductase family	hypothetical NADPH-flavin oxidoreductase	Oxygen-insensitive NADPH nitroreductase	identified by match to protein family HMM PF00881 NAD(P)H-flavin oxidoreductase	NADPH-flavin oxidoreductase	Putative nitroreductase	Oxygen-insensitive NADPH nitroreductase	Putative nitroreductase	nitro/flavin reductase	Putative nitroreductase	NADPH flavin oxidoreductase	NADPH-linked nitro/flavin oxidoreductase	NADPH-flavin oxidoreductase	Putative nitroreductase	Modulator of drug activity A	CDS_ID OB1385; nitro:flavin reductase NADPH-flavin oxidoreductase	
ECOLI00811	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Lysine biosynthesis protein LysX/ribosomal protein S6 modification protein RimK	Uncharacterized protein MG012 homolog	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	putative ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein 2	Ribosomal protein S6 modification protein	PMID: 20437337 best DB hits: BLAST: pir:D82997; ribosomal protein S6 modification protein PA5197; E=3e-76 pir:E82096; ribosomal protein S6 modification protein VC2281; E=2e-74 swissprot:P17116; RIMK_ECOLI RIBOSOMAL PROTEIN S6 MODIFICATION; E=1e-60 COG: PA5197; COG0189 Glutathione synthase/Ribosomal protein S6; E=3e-77 rimK; COG0189 Glutathione synthase/Ribosomal protein S6 modification; E=1e-61 HI1531; COG0189 Glutathione synthase/Ribosomal protein S6; E=2e-50 PFAM: PF02080; Potassium channel; E=3.8e-10 ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	CDS_ID OB2059 hypothetical protein	Ribosomal protein S6 modification protein	Ribosomal protein S6 modification protein	Residues 1 to 300 of 300 are 98 pct identical to residues 1 to 300 of a 300 aa protein from Escherichia coli O157:H7 ref: NP_308959.1 ribosomal protein S6 modification protein	similar to ribosomal protein S6 modification enzyme hypothetical protein	conserved gene glutathione synthase, ribosomal protein S6 modification protein	
ECOLI00812	Uncharacterized protein ybjN	Hypothetical protein ybjN	Putative uncharacterized protein	Uncharacterized protein ybjN	Residues 17 to 174 of 174 are 100 pct identical to residues 1 to 158 of a 158 aa protein from Escherichia coli O157:H7 ref: NP_308960.1 putative sensory transduction regulator	Putative uncharacterized protein	Similar to putative sensory transduction regulator YbjN of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	putative sensory transduction regulator	putative sensory transduction regulator	conserved hypothetical protein	putative sensory transduction regulator	Putative cytoplasmic protein YbjN	Hypothetical protein	Hypothetical protein	Putative sensory transduction regulator	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Hypothetical protein	putative sensory transduction regulator	Hypothetical protein	conserved hypothetical protein	Putative sensory transduction regulator	Putative sensory transduction regulator	Putative uncharacterized protein	
ECOLI00813	Putrescine-binding periplasmic protein	Periplasmic putrescine-binding protein; permease protein	Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein	Putrescine-binding periplasmic protein	Putrescine-binding periplasmic protein	Putative polyamine transport protein	Putative polyamine transport protein	Putrescine-binding periplasmic protein	Putrescine ABC transporter, periplasmic putrescine-binding protein	Putative polyamine transport protein	Putrescine ABC transporter, periplasmic putrescine-binding protein	Periplasmic putrescine-binding protein; permease protein	ABC transporter, polyamine transport protein	Residues 26 to 395 of 395 are 99 pct identical to residues 1 to 370 of a 370 aa protein from Escherichia coli K12 ref: NP_415375.1 periplasmic putrescine-binding protein; permease protein	Putrescine-binding periplasmic protein	identified by similarity to SP:P31133; match to protein family HMM PF01547 putrescine ABC transporter, periplasmic putrescine-binding protein	Polyamine ABC transporter system, substrate- binding protein	Spermidine/putrescine ABC transporter	IPR001188: Bacterial periplasmic spermidine/putrescine-binding protein ABC superfamily (peri_perm), putrescine transporter	similar to Salmonella typhi CT18 putrescine-binding periplasmic protein precursor putrescine-binding periplasmic protein precursor	Periplasmic putrescine-binding protein	ABC type periplasmic putrescine/spermidine binding protein, potF	Spermidine/putrescine ABC transporter, binding periplasmic protein	Putrescine ABC transporter, periplasmic putrescine-binding protein	ABC superfamily (Peri_perm), putrescine transporter	periplasmic putrescine-binding protein; permease protein	identified by similarity to SP:P31133; similarity to GB:AAK15487.1; match to protein family HMM PF01547 putrescine ABC transporter, periplasmic putrescine-binding protein	identified by match to protein family HMM PF01547 putrescine ABC transporter, periplasmic putrescine-binding protein	
ECOLI00814	Putrescine transport ATP-binding protein potG	Sulfate/molybdate ABC transporter, ATP-binding protein	ATP-binding component of putrescine transport system	Spermidine/putrescine ABC transporter, ATP- binding protein	Spermidine/putrescine ABC transporter, ATP- binding protein	Polyamine transport protein PotG	ABC transporter, nucleotide binding/ATPase protein	Putrescine transport ATP-binding protein PotG	Putrescine transport ATP-binding protein potG	putrescine ABC transporter ATP-binding protein	similar to GP:15073645, and SP:P31134; identified by sequence similarity; putative spermidine/putrescine ABC transporter, ATP-binding protein	Putative polyamine transport ATP-binding protein	Putative polyamine transport ATP-binding protein	Polyamine ABC transporter, ATP-binding protein	Putrescine transport ATP-binding protein	PMID: 97221617 best DB hits: BLAST: gb:AAK03847.1; (AE006213) unknown [Pasteurella multocida]; E=2e-43 pir:E70943; probable ABC-type sugar transport protein -; E=1e-42 embl:CAB77334.1; (AL160331) ABC transporter ATP-binding protein; E=1e-42 COG: Rv2038c; COG1130 ABC-type sugar/spermidine/putrescine transport; E=9e-44 PA0280; COG1118 ABC-type sulfate/molybdate transport systems, ATPase; E=5e-41 BH1140; COG1130 ABC-type sugar/spermidine/putrescine transport; E=5e-41 PFAM: PF00071; Ras family; E=0.056 PF00005; ABC transporter; E=8.4e-47 conserved hypothetical protein-putative ABC transporter	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PUTRESCINE TRANSPORT ATP-BINDING PROTEIN	Putrescine ABC transporter, ATP-binding protein	Putative polyamine transport ATP-binding protein	Putrescine ABC transporter, ATP-binding protein	PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG	ATP-binding component of putrescine transport system	SC8B7.10c, probable polyamine ABC-transporter ATP-bi nding protein, len: 397 aa; similar to many e.g.  POTA_ECOLI spermidine/putrescine transport ATP-binding (378 aa), fast a scores; opt: 933 z-score: 1101.5 E(): 0, 47.7% identity i n 325 aa overlap. Contains PS00017 ATP/GTP-binding site mot if A (P-loop), PS00211 ABC transporters family signature an d Pfam match to entry PF00005 ABC_tran, ABC transporters, s core 216.70, E-value 3.6e-61 putative polyamine ABC-transporter ATP-binding p rotein	Residues 1 to 404 of 404 are 99 pct identical to residues 1 to 404 of a 404 aa protein from Escherichia coli K12 ref: NP_415376.1 ATP-binding component of putrescine transport system	Putrescine transport ATP-binding protein	identified by similarity to SP:P31134; match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM TIGR01187 putrescine ABC transporter, ATP-binding protein	Spermidine/putrescine ABC transporter	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ATP-binding component of putrescine transport system	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp_bind), putrescine transporter	
ECOLI00815	Putrescine transport system permease protein potH	Spermidine/putrescine transport permease protein	Polyamine transport protein	Spermidine/putrescine ABC transporter, permease protein	Polyamine transport protein PotH	ABC transporter, membrane spanning protein	Putrescine transport system permease protein PotH	Permease protein of polyamine ABC transporter	Putrescine transport system permease protein potH	similar to SP:P23860; identified by sequence similarity; putative spermidine/putrescine ABC transporter, permease protein	Putative inner membrane permease polyamine transport protein	Putative inner membrane permease polyamine transport protein	Polyamine ABC transporter, permease protein	Putrescine transport system permease protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN	Putrescine ABC transporter, permease protein	Putative inner membrane permease polyamine transport protein	PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTH	Putrescine transport protein; permease	ABC transporter, polyamine transport protein, permease protein	ABC transporter permease component, Spermidine/putrescine	Polyamine ABC transporter permease protein	Residues 1 to 317 of 317 are 99 pct identical to residues 1 to 317 of a 317 aa protein from Escherichia coli K12 ref: NP_415377.1 putrescine transport protein; permease	Putrescine transport system permease protein	identified by similarity to SP:P31135; match to protein family HMM PF00528 putrescine ABC transporter, permease protein	Putrescine transport protein	Spermidine/putrescine ABC transporter	PotB spermidine-putrescine ABC transporter permease protein	IPR000515: Binding-protein-dependent transport systems inner membrane component; IPR000834: Zinc carboxypeptidase A metalloprotease (M14) ABC superfamily (membrane), putrescine transporter	
ECOLI00816	Putrescine transport system permease protein potI	Putrescine transport protein; permease	Putrescine transport system permease protein potI	Possible permease of ABC transporter	Spermidine/putrescine ABC transporter, permease protein	Polyamine transport protein PotI	ABC transporter, membrane spanning protein	Putrescine transport system permease protein PotI	Permease protein of ABC transporter	Spermidine/putrescine ABC transporter, permease protein	Putrescine transport system permease protein potI	similar to GP:16502083; identified by sequence similarity; putative spermidine/putrescine ABC transporter, permease protein, putative	Putative inner membrane permease polyamine transport protein	Putative inner membrane permease polyamine transport protein	Polyamine ABC transporter, permease protein	Putrescine transport system permease protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN	Putrescine ABC transporter, permease protein	Putative inner membrane permease polyamine transport protein	Putrescine ABC transporter, permease protein	PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTI	Putrescine transport protein; permease	ABC transporter, polyamine transport protein, permease protein	ABC transporter, polyamine transport protein, permease protein	Residues 15 to 295 of 295 are 99 pct identical to residues 1 to 281 of a 281 aa protein from Escherichia coli K12 ref: NP_415378.1 putrescine transport protein; permease	Putrescine transport system permease protein	Spermidine/putrescine transport system permease	identified by similarity to SP:P31136; match to protein family HMM PF00528 putrescine ABC transporter, permease protein	Putrescine transport system permease protein	
ECOLI00817	Inner membrane protein ybjO	Inner membrane protein ybjO	Putative membrane protein	Inner membrane protein ybjO	Residues 1 to 142 of 142 are 100 pct identical to residues 21 to 162 of a 162 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286624.1 orf, conserved hypothetical protein	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YbjO	Putative membrane protein	Putative membrane protein	Membrane protein	conserved hypothetical protein	Membrane protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ybjO	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative membrane protein	Putative membrane protein	
ECOLI00818	23S rRNA (uracil-5-)-methyltransferase rumB	23S rRNA (uracil-5-)-methyltransferase rumB	Uncharacterized RNA methyltransferase PH1259	Uncharacterized RNA methyltransferase CPE2114	23S rRNA (uracil-5-)-methyltransferase rumB	23S rRNA (uracil-5-)-methyltransferase rumB	23S rRNA (uracil-5-)-methyltransferase rumB	Uncharacterized RNA methyltransferase lmo1703	23S rRNA (uracil-5-)-methyltransferase rumB	Uncharacterized RNA methyltransferase DVU_0924	23S rRNA (uracil-5-)-methyltransferase rumB	23S rRNA (uracil-5-)-methyltransferase rumB	23S rRNA (uracil-5-)-methyltransferase rumB	RNA methyltransferase	23S rRNA (uracil-5-)-methyltransferase rumB	Uncharacterized RNA methyltransferase CA_C0523	23S rRNA (uracil-5-)-methyltransferase rumB	Uncharacterized RNA methyltransferase lin1815	Residues 1 to 375 of 375 are 98 pct identical to residues 1 to 375 of a 375 aa protein from Escherichia coli K12 ref: NP_415380.1 putative enzyme	23S rRNA (uracil-5-)-methyltransferase rumB	23S rRNA (uracil-5-)-methyltransferase	23S rRNA (uracil-5-)-methyltransferase rumB	Uncharacterized RNA methyltransferase lp_3226	Uncharacterized RNA methyltransferase ywfF	IPR000051: SAM (and some other nucleotide) binding motif; IPR001566: tRNA (uracil-5-)-methyltransferase/TrmA putative tRNA (uracil-5-)-methyltransferase	similar to Salmonella typhi CT18 hypothetical RNA methyltransferase hypothetical RNA methyltransferase	23S rRNA (uracil-5-)-methyltransferase rumB	identified by match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479 RNA methyltransferase, TrmA family	Similar to: HI0958, YBJF_HAEIN hypothetical RNA methyltransferase	
ECOLI00819	Arginine-binding periplasmic protein 2	Arginine-binding periplasmic protein 2	Arginine-binding periplasmic protein 2	Arginine 3rd transport system periplasmic binding protein	Residues 8 to 250 of 250 are 99 pct identical to residues 1 to 243 of a 243 aa protein from Escherichia coli K12 ref: NP_415381.1 arginine 3rd transport system periplasmic binding protein	Similar to amino acid ABC transporter hypothetical protein	conserved gene cystine/glutamine-binding periplasmic protein	similar to amino acid ABC transporter, periplasmic binding protein. hypothetical protein	IPR001311: Solute-binding protein/glutamate receptor; IPR001638: Bacterial extracellular solute-binding protein, family 3 ABC superfamily (bind_prot), arginine 3rd transport system	similar to Salmonella typhi CT18 arginine-binding periplasmic protein 2 precursor arginine-binding periplasmic protein	ABC transporter, periplasmic arginine binding protein artJ	Arginine 3rd transport system	Code: ET; COG: COG0834 arginine 3rd transport system periplasmic binding protein	Code: ET; COG: COG0834 arginine 3rd transport system periplasmic binding protein	Hypothetical protein precursor	Arginine-binding periplasmic protein 2	Hypothetical protein precursor	arginine ABC transporter, periplasmic arginine-binding protein ArtI identified by match to protein family HMM PF00497	Arginine-binding periplasmic protein 2	arginine 3rd transport system periplasmic binding protein Code: ET; COG: COG0834	Hypothetical protein precursor	arginine-binding periplasmic protein 2 precursor	Cystine/glutamine-binding periplasmic protein	Cationic amino acid ABC transporter, periplasmic binding protein precursor	Arginine 3rd transport system periplasmic binding protein	Putative uncharacterized protein	Arginine ABC transporter, periplasmic arginine- binding protein ArtJ	Cationic amino acid ABC transporter, periplasmic binding protein precursor	Extracellular solute-binding protein, family 3 precursor	
ECOLI04273	Uncharacterized protein yuaO	pseudo	Putative uncharacterized protein	Putative RTX family exoprotein A gene	Autotransporter	Autotransporter	Putative adhesin	ORF28 unknown	HMW2A, high molecular weight adhesin 2	Putative surface-exposed virulence protein bigA	Outer membrane autotransporter barrel	Hemolysin-type calcium-binding protein	Code: UW; COG: COG5295 putative adhesin	Hemolysin-type calcium-binding region PFAM: Hemolysin-type calcium-binding region: (0.15) KEGG: tdn:Tmden_0243 hemolysin-type calcium-binding region, ev=3e-78, 36% identity	hypothetical protein	Putative adhesin	Adhesin aidA-I	Hemolysin-type calcium-binding region	transcript_id=ENSTBET00000001767	Adhesin	YadA C-terminal domain protein PFAM: YadA C-terminal domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein	PE-PGRS family protein	Hypothetical protein	Putative haemagglutinin-like (Or adhesin-like) with a signal peptide and a putative subtilisin-like serine protease domain	Adhesin	Membrane-anchored cell surface protein	hypothetical protein KEGG: ava:Ava_4160 VCBS	Outer membrane autotransporter barrel domain protein precursor	Putative uncharacterized protein	
ECOLI00820	Arginine transport system permease protein artM	Arginine ABC transporter, permease protein	Arginine transport system permease protein ArtM	Arginine transport system permease protein artM	Arginine ABC transporter, permease protein	Arginine transport system permease protein	Arginine ABC transporter permease protein artM	Arginine transport system permease protein	ABC-type arginine/histidine transport system, permease component	Residues 1 to 222 of 222 are 100 pct identical to residues 1 to 222 of a 222 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286630.1 arginine 3rd transport system permease protein	Arginine transport system permease protein	Arginine transport system permease protein artM	ABC superfamily (membrane), arginine 3rd transport system	similar to Salmonella typhi CT18 arginine transport system permease protein ArtM arginine transport system permease protein ArtM	ABC arginine transporter, permease subunit artM	ABC-type amino acid transport system, permease component ArtM protein	Arginine 3rd transport system	arginine transport system permease protein	Code: E; COG: COG4160 arginine 3rd transport system permease protein	Code: E; COG: COG4160 arginine 3rd transport system permease protein	arginine ABC transporter permease component	Code: E; COG: COG4160 arginine 3rd transport system permease protein	Arginine transport system permease protein ArtM	Arginine transport system permease protein	Arginine 3rd transport system permease protein	arginine ABC transporter, permease protein identified by similarity to SP:P30862; match to protein family HMM PF00528; match to protein family HMM TIGR01726	Arginine transport system permease protein	Arginine transport system permease protein	arginine 3rd transport system permease protein Code: E; COG: COG4160	
ECOLI00821	Arginine transport system permease protein artQ	Probable permease of ABC transporter	ABC-type arginine transport system, permease component	Arginine transport system permease protein ArtQ	Putative arginine ABC transporter, permease protein	Arginine transport system permease protein artQ	Arginine ABC transporter, permease protein	Arginine transport system permease protein	Amino acid ABC transporter, permease protein	Arginine ABC transporter, permease protein	Arginine 3rd transport system permease protein	Arginine transport system permease protein	ABC-type arginine transport system, permease component	Residues 1 to 238 of 238 are 100 pct identical to residues 1 to 238 of a 238 aa protein from Escherichia coli K12 ref: NP_415383.1 arginine 3rd transport system permease protein	Arginine transport system permease protein	Arginine transport system permease protein artQ	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), arginine 3rd transport system	similar to Salmonella typhi CT18 arginine transport system permease protein ArtQ arginine transport system permease protein ArtQ	ABC arginine transporter, permease subunit artQ	Similar to: HI1178, ARTQ_HAEIN arginine transport system permease protein	ABC-type amino acid transport system, permease component ArtM protein	Arginine 3rd transport system	arginine transport system permease protein	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Code: E; COG: COG4215 arginine 3rd transport system permease protein	Code: E; COG: COG4215 arginine 3rd transport system permease protein	arginine ABC transporter permease component	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Code: E; COG: COG4215 arginine 3rd transport system permease protein	
ECOLI00822	Arginine-binding periplasmic protein 1	Amino acid (Lysine/arginine/ornithine/histidine/octopine) ABC transporter periplasmic binding protein	Arginine ABC transporter, periplasmic arginine- binding protein	Arginine-binding periplasmic protein 1	putative ABC-type amino acid transport/signaltransduction system	Arginine-binding periplasmic protein 1	Arginine ABC transporter, periplasmic arginine- binding protein	Arginine-binding periplasmic protein 1	Arginine ABC transporter, periplasmic arginine- binding protein	Arginine 3rd transport system periplasmic binding protein	ABC-type amino acid transport/signal transduction system	Residues 1 to 243 of 243 are 99 pct identical to residues 1 to 243 of a 243 aa protein from Escherichia coli K12 ref: NP_415384.1 arginine 3rd transport system periplasmic binding protein	Arginine-binding periplasmic protein 1	Arginine-binding periplasmic protein 1	IPR001311: Solute-binding protein/glutamate receptor; IPR001638: Bacterial extracellular solute-binding protein, family 3 ABC superfamily (bind_prot), arginine transport system	similar to Salmonella typhi CT18 arginine-binding periplasmic protein 1 precursor arginine-binding periplasmic protein 1 precursor	ABC transporter, periplasmic arginine-binding protein artI	Arginine transport system	Code: ET; COG: COG0834 arginine 3rd transport system periplasmic binding protein	Code: ET; COG: COG0834 arginine 3rd transport system periplasmic binding protein	Code: ET; COG: COG0834 arginine 3rd transport system periplasmic binding protein	Arginine-binding periplasmic protein 1	Arginine-binding periplasmic protein 1 precursor	Arginine-binding periplasmic protein 1	extracellular solute-binding protein, family 3 PFAM: extracellular solute-binding protein, family 3 KEGG: pfo:Pfl_2064 lysine-arginine-ornithine-binding periplasmic protein	Arginine-binding periplasmic protein 1 precursor	Arginine-binding periplasmic protein 1 precursor	Hypothetical protein	putative ABC transporter, periplasmic amino acid-binding protein	
ECOLI00823	Arginine transport ATP-binding protein artP	Arginine transport ATP-binding protein ArtP	Arginine transport ATP-binding protein artP	Arginine ABC transporter, ATP-binding protein	Arginine transport ATP-binding protein	Arginine ABC transporter, ATP-binding protein	Arginine transport ATP-binding protein artP	Residues 25 to 266 of 266 are 100 pct identical to residues 1 to 242 of a 242 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286633.1 ATP-binding component of 3rd arginine transport system	Arginine transport ATP-binding protein	Arginine transport ATP-binding protein ArtP	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp&memb), arginine transport system	similar to Salmonella typhi CT18 arginine transport ATP-binding protein ArtP arginine transport ATP-binding protein ArtP	ABC arginine transporter, ATP-binding subunit artP	ABC-type polar amino acid transport system, ATPase component GlnQ protein	Arginine transport system	arginine ABC transporter, ATP-binding protein	Code: E; COG: COG4161 ATP-binding component of 3rd arginine transport system	Code: E; COG: COG4161 ATP-binding component of 3rd arginine transport system	arginine ABC transporter ATP-binding component	Code: E; COG: COG4161 ATP-binding component of 3rd arginine transport system	Arginine transport ATP-binding protein ArtP	Arginine transport ATP-binding protein	Arginine transport ATP-binding protein ArtP	Arginine ABC transporter, ATP-binding protein	Arginine transport ATP-binding protein	Arginine transport ATP-binding protein	ABC-type arginine transporter, ATP-binding protein	ATP-binding component of 3rd arginine transport system Code: E; COG: COG4161	Arginine transport ATP-binding protein	
ECOLI00824	Uncharacterized lipoprotein ybjP	Putative lipoprotein ybjP	Putative enzyme	Residues 1 to 173 of 173 are 98 pct identical to residues 1 to 173 of a 173 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286634.1 putative enzyme	Putative lipoprotein	putative lipoprotein	similar to Salmonella typhi CT18 probable lipoprotein probable lipoprotein	Putative lipoprotein	Putative lipoprotein	putative enzyme	putative lipoprotein	putative enzyme	Putative lipoprotein YbjP	Putative lipoprotein precursor	Putative lipoprotein YbjP	Lipoprotein precursor	Putative lipoprotein precursor	putative enzyme	Lipoprotein precursor	putative lipoprotein	Lipoprotein precursor	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein precursor	Predicted lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative enzyme precursor	Putative lipoprotein	
ECOLI00825	UPF0145 protein ybjQ	UPF0145 protein GSU2791	UPF0145 protein sll118	Hypothetical UPF0145 protein Vng2432c	UPF0145 protein MTH_507	UPF0145 protein BT_3410	UPF0145 protein BL0562	UPF0145 protein EF_0241	UPF0145 protein CC_2377	UPF0145 protein PM1668	UPF0145 protein VVA0283	UPF0145 protein TT_C0892	UPF0145 protein ybjQ	UPF0145 protein alr2488	UPF0145 protein lmo0208	UPF0145 protein BF0270	UPF0145 protein BT9727_4859	conserved hypothetical protein	UPF0145 protein ybjQ	UPF0145 protein VC_A0951	UPF0145 protein ECA2666	UPF0145 protein STH1265	PMID: 11248100 best DB hits: BLAST: gb:AAK03752.1; (AE006203) unknown [Pasteurella multocida]; E=6e-19 pir:B64825; hypothetical protein b0866 - Escherichia coli -----; E=3e-18 ddbj:BAB04830.1; (AP001510) BH1111~unknown conserved protein; E=4e-18 COG: ybjQ; COG0393 Uncharacterized ACR; E=3e-19 PFAM: PF01906; Domain of unknown function DUF74; E=2.7e-35 conserved hypothetical protein	UPF0145 protein CTC_01500	hypothetical protein	hypothetical conserved protein	UPF0145 protein ybjQ	UPF0145 protein BH1111	UPF0145 protein VV2_1464	
ECOLI00827	Uncharacterized protein ybjS	C-3 sterol dehydrogenase, catalyzes the second of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis.  [Source:SGD;Acc:S000002969]	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating [Source:GeneDB_Spombe;Acc:SPBC3F6.02c]	highly similar to sp|P53199 Saccharomyces cerevisiae YGL001c ERG26 C-3 sterol dehydrogenase (C-4 decarboxylase) singleton, start by similarity	DTDP-4-dehydrorhamnose 3,5-epimerase	DEHA2C11550p;highly similar to uniprot|P53199 Saccharomyces cerevisiae YGL001C ERG26 C-3 sterol dehydrogenase;	NAD(P)-dependent steroid dehydrogenase	Putative oxidoreductase	3-beta hydroxysteroid dehydrogenase/isomerase family protein	3-beta hydroxysteroid dehydrogenase/isomerase family protein	Hypothetical protein	3-beta hydroxysteroid dehydrogenase/isomerase family protein	Putative dehydrogenase	Putative nucleotide di-P-sugar epimerase or dehydratase	hypothetical protein	3-beta hydroxysteroid dehydrogenase	NAD(P)H steroid dehydrogenase	Residues 10 to 358 of 358 are 98 pct identical to residues 1 to 349 of a 349 aa protein from Escherichia coli O157:H7 ref: NP_308981.1 putative nucleotide di-P-sugar epimerase or dehydratase	Putative uncharacterized protein	similar to 3-beta hydroxysteroid dehydrogenase/isomerase hypothetical protein	conserved gene 3-beta-hydroxysteroid dehydrogenase/isomerase	Probable dehydrogenase	putative nucleoside-diphosphate-sugar epimerase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	Putative uncharacterized protein	Putative nucleoside-diphosphate-sugar epimerase	3-beta hydroxysteroid dehydrogenase/isomerase family protein	identified by match to protein family HMM PF07993 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative	NAD-dependent epimerase/dehydratase	
ECOLI00826	N-acetylmuramoyl-L-alanine amidase amiD	Anhydro-N-acetylmuramyl-tripeptide amidase	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	Putative N-acetylmuramoyl-L-alanine amidase	Probable N-acetylmuramoyl-L-alanine amidase ybjR	similar to GP:15075210; identified by sequence similarity; putative N-acetylmuramoyl-L-alanine amidase, family 2	Putative N-acetylmuramoyl-L-alanine amidase	ANHYDRO-N-ACETYLMURAMYL-TRIPEPTIDE AMIDASE	Putative regulator	hypothetical protein	Anhydro-N-acetylmuramyl-tripeptide amidase	Putative peptidoglycan binding domain 1:N- acetylmuramoyl-L-alanine amidase, family 2	Residues 1 to 276 of 276 are 97 pct identical to residues 1 to 276 of a 276 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286639.1 putative regulator	N-acetylmuramoyl-L-alanine amidase protein	putative aminidase	similar to Salmonella typhi CT18 putative N-acetylmuramoyl-L-alanine amidase putative N-acetylmuramoyl-L-alanine amidase	similar to BR1444, N-acetylmuramoyl-L-alanine amidase, family 2 N-acetylmuramoyl-L-alanine amidase, family 2	Putative aminidase	probable ybjR probable N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase, family 2	Code: V; COG: COG3023 putative regulator	Putative peptidoglycan binding domain 1:N-acetylmuramoyl-L-alanine amidase, family 2	Code: V; COG: COG3023 putative regulator	Negative regulator of AmpC, AmpD	putative N-acetylmuramoyl-L-alanine amidase	negative regulator of AmpC, AmpD	negative regulator of AmpC, AmpD	negative regulator of AmpC, AmpD	
ECOLI00828	Uncharacterized protein ybjT	Vng2488c	Putative oxidoreductase	NADH dehydrogenase	Predicted nucleoside-diphosphate-sugar epimerase	Nucleoside-diphosphate-sugar epimerase	Putative uncharacterized protein STY0929	Predicted nucleoside-diphosphate-sugar epimerases	hypothetical nucleoside-diphosphate-sugar epimerase	Putative uncharacterized protein	Hypothetical protein ybjT	unknown	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	best DB hits: BLAST: pir:T36454; probable oxidoreductase - Streptomyces coelicolor; E=1e-110 pir:T51117; hypothetical protein [imported] - Brevibacterium linens; E=4e-66 gb:AAG55251.1; AE005268_4 (AE005268) putative dTDP-glucose enzyme; E=2e-55 COG: VC1632; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=2e-56 PH0378; COG0451 Nucleoside-diphosphate-sugar epimerases; E=4e-05 slr0317; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=8e-05 PFAM: PF02716; Isoflavone reductase; E=0.16 PF01118; Semialdehyde dehydrogenase, N; E=0.012 PF01370; NAD dependent epimerase/dehyd; E=0.043 probable oxidoreductase-putative NAD-dependent nucleoside-diphosphate-sugar epimerase	probable oxidoreductase	Putative uncharacterized protein VP1223	Putative uncharacterized protein	Putative dTDP-glucose enzyme	similar to AP002553-203|BAB34378.1| percent identity: 31 in 474 aa conserved hypothetical protein	Nucleoside-diphosphate-sugar epimerase	SCF43A.31, possible oxidoreductase, len: 520 aa; weakly similar to some oxidoreductases e.g. SW:NUEM_BOVIN (EMBL:X59418) Bos taurus NADH-ubiquinone oxidoreductase 39 kD subunit precursor (380 aa), fasta scores; opt: 288 z-score: 319.2 E(): 1.9e-10, 23.8% identity in 286 aa overlap. Also similar to hypothetical proteins e.g.  SW:YBJT_ECOLI (EMBL:AE000188) Escherichia coli hypothetical protein (476 aa) (32.2% identity in 490 aa overlap). The N-terminal half is similar to TR:O54156 (EMBL:AL021409) S.coelicolor probable oxidoreductase (347 aa) (31.7% identity in 287 aa overlap) putative oxidoreductase	Predicted nucleoside-diphosphate-sugar epimerases	Residues 1 to 501 of 501 are 98 pct identical to residues 1 to 501 of a 501 aa protein from Escherichia coli dbj: BAA35583.1 orf, conserved hypothetical protein	Putative membrane protein	conserved domain protein	Hypothetical protein SE2198	Putative uncharacterized protein	
ECOLI00829	Low specificity L-threonine aldolase	Threonine aldolase, catalyzes the cleavage of L- allo-threonine and L-threonine to glycine; involved in glycine biosynthesis. [Source:SGD;Acc:S000000772]	similar to sp|O74267 Ashbya gossypii Threonine aldolase, hypothetical start	Probable threonine aldolase [Source:GeneDB_Spombe;Acc:SPAC23H3.09c]	highly similar to sp|P37303 Saccharomyces cerevisiae YEL046c GLY1 L-threonine aldolase, low-specific singleton, start by similarity	Low-specificity threonine aldolase	L-allo-threonine aldolase	L-allo-threonine aldolase	Threonine aldolase, low-specificity	Putative uncharacterized protein	L-allo-threonine aldolase	Threonine aldolase	L-allo-threonine aldolase	L-allo-threonine aldolase	L-allo-threonine aldolase	Probable low-specificity L-threonine aldolase	L-allo-threonine aldolase	L-allo-threonine aldolase, putative	putative threonine aldolase	Low-specificity L-threonine aldolase	L-allo-threonine aldolase	Low-specificity L-threonine aldolase	Low-specificity L-threonine aldolase	L-allo-threonine aldolase	Threonine aldolase	L-allo-threonine aldolase	Threonine aldolase, low-specificity	Low-specificity L-threonine aldolase	L-allo-threonine aldolase	
ECOLI00830	Pyruvate dehydrogenase	Acetolactate synthase large subunit homolog	Pyruvate dehydrogenase	Putative pyruvate dehydrogenase/oxidase FAD and thiamine PPi cofactors	Pyruvate dehydrogenase	Pyruvate dehydrogenase	Thiamine pyrophosphate-requiring enzymes	Pyruvate dehydrogenase	Pyruvate oxidase	Pyruvate dehydrogenase	Pyruvate dehydrogenase	Pyruvate oxidase	Cytochrome-dependent pyruvate dehydrogenase	Putative pyruvate dehydrogenase	Pyruvate oxidase	CDS_ID OB3409 pyruvate oxidase	SC1A9.19, poxB, pyruvate oxidase, len: 580aa; similar to many including POXB_ECOLI (EMBL:X04105) PoxB, pyruvate oxidase from Escherichia coli (572 aa) fasta scores; opt:2086, z-score: 2458.4, E():0, (53.1% identity in 571 aa overlap). Contains Pfam match to entry PF00205 TPP_enzymes, Thiamine pyrophosphate enzymes, score 499.70, E-value 2.4e-154. pyruvate dehydrogenase	Residues 1 to 572 of 572 are 99 pct identical to residues 1 to 572 of a 572 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286643.1 pyruvate oxidase	Pyruvate dehydrogenase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark pyruvate dehydrogenase	COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome) pyruvate oxidase	Pyruvate oxidase	IPR000399: Pyruvate decarboxylase pyruvate dehydrogenase/oxidase FAD and thiamine PPi cofactors, cytoplasmic in absence of cofactors	similar to Salmonella typhi CT18 pyruvate dehydrogenase pyruvate dehydrogenase	Pyruvate dehydrogenase	Pyruvate dehydrogenase	Similar to Escherichia coli pyruvate dehydrogenase [cytochrome] PoxB or B0871 SWALL:POXB_ECOLI (SWALL:P07003) (572 aa) fasta scores: E(): 2e-107, 48.25% id in 572 aa, and to Lactobacillus plantarum pyruvate oxidase Pox5 or LP_3589 SWALL:POXB_LACPL (SWALL:P37063) (603 aa) fasta scores: E(): 2e-47, 32.44% id in 527 aa putative pyruvate dehydrogenase [cytochrome]	Pyruvate dehydrogenase/oxidase FAD and thiamine PPi cofactors, cytoplasmic in absence of cofactors	pyruvate dehydrogenase	
ECOLI00831	NADH oxidoreductase hcr	Flavodoxin reductase family 1	NADH oxidoreductase Hcr	Related to xylene monooxygenase electron transfer component	Putative ferredoxin oxidoreductase protein	hypothetical ferredoxin oxidoreductase	NADH oxidoreductase hcr	Iron-sulfur cluster-binding protein	NADH oxidoreductase	Iron-sulfur cluster-binding protein	Putative ferredoxin, 2Fe-2S	Putative ferredoxin oxidoreductase protein	Putative oxidoreductase	Putative enzyme	SC4G1.25c, possible oxidoreductase, len: 233 aa; similar to TR:Q51492 (EMBL:D84146) Pseudomonas aeruginosa reductase PahA, 328 aa; fasta scores: opt: 297 z-score: 346.1 E(): 8.3e-12; 32.0% identity in 203 aa overlap putative oxidoreductase	Flavodoxin reductase family 1	Residues 1 to 324 of 324 are 98 pct identical to residues 1 to 324 of a 324 aa protein from Escherichia coli dbj: BAA35586.1 Ferredoxin [2Fe-2S] I	Putative oxidoreductase	Probable ferredoxin oxidoreductase protein	Putative uncharacterized protein	HYPOTHETICAL OXIDOREDUCTASE	Mb3259c, -, len: 380 aa. Equivalent to Rv3230c, len: 380 aa, from Mycobacterium tuberculosis strain H37Rv, (99.7% identity in 380 aa overlap). Putative oxidoreductase (EC 1.-.-.-), with some similarity to various proteins, especially reductases e.g. Q9HUS4|PA4889 PROBABLE OXIDOREDUCTASE from Pseudomonas aeruginosa (366 aa), FASTA scores: opt: 516, E(): 1.8e-24, (33.8% identity in 367 aa overlap); P95533|TDNB ELECTRON TRANSFER PROTEIN from Pseudomonas putida (337 aa), FASTA scores: opt: 380, E(): 4e-16, (30.7% identity in 277 aa overlap); BAB34381|ECS0958 NADH OXIDOREDUCTASE FOR THE HCP from Escherichia coli strain O157:H7 (322 aa), FASTA scores: opt: 369, E(): 1.8e-15, (28.65% identity in 328 aa overlap); Q44253|ATDA5 ANILINE DIOXYGENASE REDUCTASE COMPONENT from Acinetobacter sp. (336 aa), FASTA scores: opt: 305, E(): 1.6e-11, (27.4% identity in 303 aa overlap); etc. HYPOTHETICAL OXIDOREDUCTASE	IPR000951: Phthalate dioxygenase reductase; IPR001041: Ferredoxin; IPR001221: Phenol hydroxylase reductase;IPR001433: Oxidoreductase FAD/NAD(P)-binding;IPR008333: Oxidoreductase FAD-binding region NADH oxidoreductase for hcp gene product	similar to Salmonella typhi CT18 NADH oxidoreductase Hcr NADH oxidoreductase Hcr	Putative oxidoreductase	flavohemoprotein	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Hmp protein	Oxidoreductase, FAD-binding, putative	NADH oxidoreductase for hcp gene product	
ECOLI00832	Hydroxylamine reductase	Hydroxylamine reductase	Prismane protein homolog	Prismane protein homolog	Hydroxylamine reductase	Hydroxylamine reductase	Hydroxylamine reductase	Prismane protein	Probable prismane protein	Hydroxylamine reductase	Hydroxylamine reductase	putative prismane protein	Hydroxylamine reductase	Hybrid cluster protein	Hydroxylamine reductase	Hydroxylamine reductase	Prismane protein	PRISMANE PROTEIN HOMOLOG	Hydroxylamine reductase	Hydroxylamine reductase	Hydroxylamine reductase	Residues 1 to 552 of 552 are 99 pct identical to residues 1 to 552 of a 552 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286645.1 putative prismane	Hydroxylamine reductase	similar to prismane-protein homolog hybrid cluster protein	similar to Salmonella typhi Ty2 prismane-like protein prismane-like protein	Hydroxylamine reductase	COG1151 6Fe-6S prismane cluster-containing protein	hydroxylamine reductase	6Fe-6S prismane cluster-containing protein Hypothetical protein	
ECOLI00833	Uncharacterized protein ybjE	Uncharacterized protein HI1452	Putative uncharacterized protein	Putative uncharacterized protein	Predicted membrane protein	Putative membrane protein	conserved hypothetical protein.	Hypothetical protein ybjE	Putative uncharacterized protein VC1151	Putative membrane protein	Putative uncharacterized protein VP1239	Putative surface protein	Predicted membrane protein	Residues 1 to 315 of 315 are 98 pct identical to residues 1 to 315 of a 315 aa protein from Escherichia coli K12 ref: NP_415395.1 putative surface protein	Putative membrane protein	Similar to putative surface protein YbjE of Escherichia coli	IPR005642: Membrane protein of unknown function DUF340 putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Hypothetical integral membrane protein	conserved membrane protein	putative surface protein	Pseudogene. Similar to Salmonella typhi putative membrane protein STY0934 or T1995 SWALL:Q8Z828 (EMBL:AL627268) (299 aa) fasta scores: E(): 2.2e-21, 32.45% id in 302 aa, and to Escherichia coli hypothetical protein YbjE or B0874 SWALL:YBJE_ECOLI (SWALL:P75826) (299 aa) fasta scores: E(): 2.2e-21, 30.79% id in 302 aa. Note This CDS has a frameshift after residue 95 pseudo putative membrane protein (pseudogene)	Uncharacterized membrane protein Hypothetical protein	Similar to Q8ZQE7 Putative inner membrane protein from Salmonella typhimurium (299 aa). FASTA: opt: 439 Z-score: 520.3 E(): 3.9e-21 Smith-Waterman score: 462; 28.808 identity in 302 aa overlap. Contains a frameshift after aa 128. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt0967c pseudo inner membrane protein, pseudogene	Putative inner membrane protein	Best Blastp Hit: pir||G81069 conserved hypothetical protein NMB1562 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7226809|gb|AAF41916.1| (AE002506) conserved hypothetical protein [Neisseria meningitidis MC58] conserved hypothetical protein	Code: S; COG: COG2431 putative surface protein	identified by match to protein family HMM PF03956 putative membrane protein	
ECOLI00834	Aquaporin Z	Aquaporin Z	Putative aquaporin	Aquaporin Z	Aquaporin Z	Aquaporin Z	Aquaporin Z 2	Aquaporin Z	Aquaporin	Aquaporin Z	Aquaporin Z	putative aquaporin Z	Aquaporin Z	Aquaporin	identified by match to protein family HMM PF00230 aquaporin Z	similar to GP:8131848, and SP:Q9LA79; identified by sequence similarity; putative aquaporin Z	Aquaporin Z	Aquaporin Z	Aquaporin Z	aquaporin Z	Putative transmembrane water channel	Aquaporin Z	Aquaporin Z	Aquaporin Z	Aquaporin Z	aquaporin, nodulin-like intrinsic protein	Aquaporin Z	Aquaporin Z	Residues 3 to 233 of 233 are 100 pct identical to residues 1 to 231 of a 231 aa protein from Escherichia coli K12 ref: NP_415396.1 transmembrane water channel; aquaporin Z	
ECOLI00836	Uncharacterized protein ybjX	LapB	Putative virK protein	Hypothetical protein ybjX	Putative uncharacterized protein	Putative virK protein	Putative enzyme	hypothetical protein	Residues 1 to 330 of 330 are 99 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286649.1 putative enzyme	Putative virulence factor	Similar to unknown protein YbjX of Escherichia coli	Putative uncharacterized protein	Homolog of virK	similar to Salmonella typhi CT18 putative virK protein putative virK protein	Putative virulence factor	Homolog of virK	putative membrane protein	Code: S; COG: COG2990 putative enzyme	Code: S; COG: COG2990 putative enzyme	Code: S; COG: COG2990 putative enzyme	Putative uncharacterized protein	Putative virulence factor	conserved hypothetical protein	protein of unknown function DUF535	Putative uncharacterized protein ybjX	Hypothetical protein	Virulence factor	conserved hypothetical protein identified by match to protein family HMM PF04393	Putative virulence factor	
ECOLI00835	Uncharacterized protein ybjD	Predicted ATP-dependent endonuclease	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical ATP-dependent endonuclease of the OLD family	Hypothetical protein ybjD	Putative uncharacterized protein VCA0544	Putative uncharacterized protein	Putative uncharacterized protein VPA0854	Putative uncharacterized protein ybjD	Predicted ATP-dependent endonuclease of the OLD family	Residues 1 to 552 of 552 are 99 pct identical to residues 1 to 552 of a 552 aa protein from Escherichia coli K12 ref: NP_415397.1 orf, conserved hypothetical protein	Putative uncharacterized protein	RecF protein-like protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Predicted ATP-dependent endonuclease of the OLD family Hypothetical protein	Homology with RecF protein	Code: L; COG: COG3593 conserved hypothetical protein	Code: L; COG: COG3593 conserved hypothetical protein	Code: L; COG: COG3593; orf conserved hypothetical protein	ATP-dependent endonuclease of the OLD family	Putative uncharacterized protein	Hypothetical protein	putative exonuclease	Putative uncharacterized protein ybjD	Hypothetical protein	homology with RecF protein	
ECOLI00837	Macrolide-specific efflux protein macA	Macrolide-specific efflux protein macA	Efflux transporter, RND family, MFP subunit	Macrolide-specific efflux protein macA	Membrane permease, predicted cation efflux pumps	Residues 1 to 339 of 339 are 100 pct identical to residues 42 to 380 of a 380 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286650.1 putative membrane protein	Probable macrolide-specific efflux protein macA	Macrolide-specific efflux protein MacA	Probable membrane protein	paral putative membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative HlyD family secretion protein	Putative membrane protein	probable macrolide-specific efflux protein	Code: M; COG: COG0845 putative membrane protein	Code: M; COG: COG0845 putative membrane protein	secretion protein HlyD	Secretion protein HlyD	Code: M; COG: COG0845 putative membrane protein	Macrolide-specific efflux protein MacA	Putative HlyD family secretion protein	Macrolide-specific efflux protein MacA	HlyD family secretion protein	macrolide efflux protein MacA identified by match to protein family HMM TIGR01730	Putative HlyD family secretion protein precursor	macrolide efflux protein MacA Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter	Efflux transporter, RND family, MFP subunit precursor	putative membrane protein Code: M; COG: COG0845	HlyD family secretion protein	
ECOLI00838	Macrolide export ATP-binding/permease protein macB	Macrolide export ATP-binding/permease protein macB	Macrolide export ATP-binding/permease protein macB	Macrolide export ATP-binding/permease protein macB	Macrolide export ATP-binding/permease protein macB	Macrolide export ATP-binding/permease protein macB	Lmo0744 protein	Macrolide export ATP-binding/permease protein macB	Macrolide export ATP-binding/permease protein macB	best DB hits: BLAST: pir:C81187; ABC transporter, ATP-binding protein NMB0549 [imported]; E=3e-97 pir:C81916; probable ABC transporter ATP-binding protein NMA0729; E=8e-96 gb:AAG55261.1; AE005269_5 (AE005269) putative ATP-binding; E=7e-94 COG: BS_yknY; COG1136 ABC-type (unclassified) transport system, ATPase; E=1e-56 NMB0549_2; COG0577 Predicted permease; E=5e-46 PFAM: PF00735; Cell division protein; E=0.7 PF00005; ABC transporter; E=3e-64 PF02687; Predicted permease; E=0.2 ABC transporter, ATP-binding protein	Macrolide export ATP-binding/permease protein macB 2	Macrolide export ATP-binding/permease protein macB	ABC TRANSPORTER ATP-BINDING AND PERMEASE PROTEIN	Export ABC transporter permease protein	pseudo	ABC transporter, ATP-binding protein	Residues 1 to 648 of 648 are 99 pct identical to residues 1 to 648 of a 648 aa protein from Escherichia coli K12 ref: NP_415400.1 putative ATP-binding component of a transport system	Macrolide export ATP-binding/permease protein macB 1	ATP binding protein	Macrolide export ATP-binding/permease protein macB	Macrolide export ATP-binding/permease protein macB	identified by similarity to SP:P75831; match to protein family HMM PF00005; match to protein family HMM PF02687 macrolide-specific efflux protein macB	ABC transporter ATP-binding and permease protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC superfamily (atp&memb) transport protein	similar to Salmonella typhi CT18 conserved hypothetical ABC transporter conserved hypothetical ABC transporter	Macrolide export ATP-binding/permease protein macB	Macrolide export ATP-binding/permease protein macB 1	Putative ABC transporter ATP-binding protein	identified by match to protein family HMM PF00005; match to protein family HMM PF02687 ABC transporter, ATP-binding/permease protein, putative	
ECOLI00839	Cold shock-like protein cspD	Cold shock-like protein cspD	CspD	Cold-shock protein CspD	Cold shock-like protein CspD	Cold shock-like protein CspD	putative cold shock-like protein CspD	Cold shock-like protein cspD	Cold shock-like protein cspD	Stress response protein CspD	Cold shock-like protein	Cold shock domain family protein	COLD SHOCK PROTEIN CSPA	Cold shock-like protein CspD	Cold shock-like protein cspD	Cold shock-like protein CspD	Residues 1 to 74 of 74 are 100 pct identical to residues 1 to 74 of a 74 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286652.1 cold shock protein	Cold shock-like protein	Cold shock protein	hypothetical protein	conserved gene cold shock protein CspD	hypothetical protein	but not cold shock induced; IPR002059: Cold-shock DNA-binding domain CspA-like protein	similar to Salmonella typhi CT18 cold shock-like protein CspD cold shock-like protein CspD	Cold shock-like protein	cold shock protein	Similar to: HI1434.1, CSPD_HAEIN cold shock-like protein CspD	Cold shock proteins CspC protein	Cold-shock protein CspD	
ECOLI00840	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS 1	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	conserved hypothetical protein	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adaptor protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	ATP-dependent Clp protease adapter protein clpS	
ECOLI00841	ATP-dependent Clp protease ATP-binding subunit clpA	ATP-dependent Clp protease subunit	ATP-dependent Clp protease subunit	ATP-dependent Clp protease, ATP-binding subunit ClpA	ATP-dependent Clp protease, ATP-binding subunit ClpA	ATP-binding protease component ClpA	ATP-dependent Clp protease ATP-binding subunit	ATP-dependent Clp protease, ATP-binding subunit ClpA	ATP-dependent Clp protease, ATP-binding subunit ClpA	ATPases with chaperone activity, ATP-binding subunit	ATP-dependent Clp protease, ATP-binding subunit	ATP-dependent Clp protease ATP-binding subunit ClpA	Probable ATP-dependent Clp protease, ATP-binding subunit ClpA	Putative ATP-dependent Clp protease ATP-binding subunit	ATP-dependent Clp protease, ATP-binding subunit ClpA	Putative ATP-dependent Clp protease, ATP-binding subunit ClpA	ATP-dependent Clp protease subunit	ATP-dependent Clp protease ATP-binding subunit clpA	similar to GP:9542862, GB:J03490, SP:P09622, PID:1339989, PID:181575, and PID:307137; identified by sequence similarity; putative ATP-dependent Clp protease, ATP-binding subunit ClpA	ATP-dependent Clp protease, ATP-binding subunit ClpA	ATP-dependent Clp protease, ATP-binding subunit ClpA	ATP-dependent clp protease ATP-binding	ATP-dependent clp protease ATP-binding	ATP-dependent Clp protease subunit A	ATP-dependent CLP protease ATP-binding subunit	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT PROTEIN	ATP-dependent clp protease, ATP-binding subunit ClpA	ATP-dependent clp protease ATP-binding	ENDOPEPTIDASE CLP ATP-BINDING CHAIN A	
ECOLI00842	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	similar to GB:M13140, GB:U10526, GB:U10516, GB:U10517, GB:U10518, GB:U10519, GB:U10520, GB:U10521, GB:U10522, GB:U10523, GB:U10524, GB:U10525, GB:L11607, GB:D29013, GB:J04201, GB:X68633, SP:P06746, PID:1060896, PID:190156, PID:292397, PID:551677, PID:553614,  and PID:938235; identified by sequence similarity; putative translation initiation factor 1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	Translation initiation factor IF-1	
ECOLI00843	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	hypothetical leucyl/phenylalanyl-tRNA-proteintransferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	identified by match to PFAM protein family HMM PF03588 leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	pseudo	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE LEUCYL/PHENYLALANYL-TRNA--PROTEIN TRANSFERASE	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	Leucyl/phenylalanyl-tRNA--protein transferase	
ECOLI00844	ATP-binding/permease protein cydC	CycC	Transport ATP-binding protein CydC	Transport ATP-binding protein CydC	putative transport ATP-binding protein CydC	Transport ATP-binding protein cydC	similar to GP:9858821; identified by sequence similarity; putative ABC transporter, ATP-binding/permease protein	Transport ATP-binding protein CydC	ABC transporter, ATP-binding protein CydC	ABC transporter ATP-binding protein	ABC transporter, ATP-binding/permease protein	ABC-type transport system, fused ATPase and permease	TRANSPORT ATP-BINDING PROTEIN CYDC	Transport ATP-binding protein CydC	ATP-binding component of cytochrome-related transport	ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease component	Residues 1 to 573 of 573 are 99 pct identical to residues 1 to 573 of a 573 aa protein from Shigella flexneri gb: AAB96772.1 ABC transporter CydC	Transport ATP-binding protein	Similar to ABC transporter	Transport ATP-binding protein CydC	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp&memb), cytochrome-related transporter	similar to Salmonella typhi CT18 transport ATP-binding protein CydC transport ATP-binding protein CydC	similar to BRA0509, ABC transporter, ATP-binding/permease protein ABC transporter, ATP-binding/permease protein	Putative ABC cytochrome efflux transporter, fused ATP-binding and permease domains	hypothetical protein, similar to ABC transporter required for expression of cytochrome bd	ABC transporter, ATP-binding/permease protein	transport ATP-binding protein CydC	Cytochrome-related transporter	hypothetical protein, similar to ABC transporter required for expression of cytochrome bd	
ECOLI00845	ATP-binding/permease protein cydD	Transport protein	ATP-binding/permease protein cydD	ABC transporter, ATP-binding protein CydD	Transport ATP-binding protein CydC, putative	ABC transporter, ATP-binding protein CydD	Transport ATP-binding protein CydD	ABC transporter, nucleotide binding/ATPase protein	Transport ATP-binding protein CydD	Transport ATP-binding protein CydC	ABC-type transporter, ATPase component and permease component	Transport ATP-binding protein cydD	ABC transporter, ATP-binding and permease	putative transport ATP-binding protein CydD	Transport ATP-binding protein cydD	identified by match to protein family HMM PF00005; match to protein family HMM PF00664 transport ATP-binding protein CydC	Transport ATP-binding protein CydD	Probable ATP-binding component of ABC transporter	Probable ATP-binding component of ABC transporter	ABC transporter, ATP-binding protein CydD	ABC transporter ATP-binding protein	Probable ATP-binding component of ABC transporter	Putative ABC transporter ATP-binding protein	Transport ATP-binding protein, CydCD	Transport ATP-binding protein CydD	Putative ABC transport system ATP-binding protein	ATP-binding component of cytochrome-related transport, Zn sensitive	CDS_ID OB1047; required for expression of cytochrome bd ABC transporter ATP-binding protein	similar to AL034355-14|CAA22219.1| percent identity: 35 in 508 aa putative transport ATP-binding protein	
ECOLI00846	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase [Source:GeneDB_Spombe;Acc:SPBC3F6.03]	highly similar to sp|P29509 Saccharomyces cerevisiae YDR353w TRR1 thioredoxin reductase (NADPH), start by similarity	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	THIOREDOXIN REDUCTASE;02_0940, THIOREDOXIN REDUCTASE, TRXB_CHLPN, gene found by Glimmer;	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	highly similar to uniprot|P29509 Saccharomyces cerevisiae YDR353w TRR1 thioredoxin reductase;	Thioredoxin	Thioredoxin reductase	336aa long hypothetical thioredoxin reductase	NEQ491	identified by match to TIGR protein family HMM TIGR01813 thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	TrxB thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	Thioredoxin reductase	
ECOLI00847	Leucine-responsive regulatory protein	Leucine responsive regulatory protein	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein, putative	Leucine-responsive regulatory protein	Lrp	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Putative leucine-responsive regulatory protein	Leucine-responsive regulatory protein	similar to SP:P19494, GB:D13185, and PID:433188; identified by sequence similarity; putative leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Product confidence : probable Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE LEUCINE-RESPONSIVE REGULATORY PROTEIN	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	LEUCINE-RESPONSIVE REGULATORY PROTEIN	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Leucine-responsive regulatory protein	Residues 19 to 182 of 182 are 100 pct identical to residues 1 to 164 of a 164 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286766.1 regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system	Leucine-responsive regulatory protein	Probable leucine-responsive regulatory dna- binding transcription regulator protein	
ECOLI00848	DNA translocase ftsK	Hypothetical cell division protein FtsK	DNA translocase ftsK	Cell division protein	DNA translocase ftsK	DNA translocase ftsK	Residues 1 to 1342 of 1342 are 99 pct identical to residues 1 to 1342 of a 1342 aa protein from Escherichia coli O157:H7 ref: NP_309002.1 cell division protein	DNA translocase ftsK	Cell division protein	IPR000694: Proline-rich region; IPR002543: Cell divisionFtsK/SpoIIIE protein cell division protein, required for cell division and chromosome partitioning	similar to Salmonella typhimurium cell division protein, required for cell division and chromosome partitioning cell division protein, required for cell division and chromosome partitioning	Putative cell division protein	DNA translocase ftsK	Code: D; COG: COG1674 cell division protein	Code: D; COG: COG1674 cell division protein	cell division protein	transcript_id=ENSDNOT00000016196	Code: D; COG: COG1674 cell division protein	Cell division protein FtsK	Initiation factor 2	Putative cell division protein	Cell division protein FtsK	transcript_id=ENSFCAT00000008126	transcript_id=ENSOGAT00000012371	Cell division protein	Putative cell division protein	cell division protein Code: D; COG: COG1674	Cell division protein	Cell division protein	
ECOLI00849	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein precursor	Outer-membrane lipoprotein carrier protein	hypothetical outer membrane lipoproteins carrier protein	Outer-membrane lipoprotein carrier protein precursor	Outer membrane lipoprotein carrier protein, putative	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein precursor	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Residues 1 to 204 of 204 are 100 pct identical to residues 1 to 204 of a 204 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286768.1 periplasmic protein effects translocation of lipoproteins from inner membrane to outer	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	Outer-membrane lipoprotein carrier protein	similar to periplasmic chaperone LolA hypothetical protein	conserved gene outer membrane lipoprotein carrier protein	similar to periplasmic chaperone LolA hypothetical protein	Outer-membrane lipoprotein carrier protein	
ECOLI00850	Replication-associated recombination protein A	Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome; interacts functionally with DNA polymerase delta; homolog of human Werner helicase interacting protein (WHIP).  [Source:SGD;Acc:S000005162]	Bll5367 protein	similar to sp|P40151 Saccharomyces cerevisiae YNL218w singleton, start by similarity	ATPase	ATPase	Replication-associated recombination protein A	highly similar to uniprot|P40151 Saccharomyces cerevisiae YNL218w;	Putative ATPase, AAA family	ATPase, AAA family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative ATPase protein	Putative uncharacterized protein	ATPase	ATPase, AAA family protein	Putative uncharacterized protein STY0960	Putative AAA family ATPase	Putative ATPase protein	putative ATPase protein	ATPase, AAA family	Hypothetical protein ycaJ	similar to GP:15074318; identified by sequence similarity; putative ATPase, AAA family	ATPase, AAA family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	ATPase, AAA family	
ECOLI00851	Seryl-tRNA synthetase	similar to sp|P38705 Saccharomyces cerevisiae Putative seryl-tRNA synthetase YHR011W (EC 6.1.1.11), hypothetical start	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	similar to uniprot|P38705 Saccharomyces cerevisiae YHR011w DIA4;	Seryl-tRNA synthetase	NEQ308	identified by match to PFAM protein family HMM PF02403 seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase 2	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	Seryl-tRNA synthetase	
ECOLI00852	Anaerobic dimethyl sulfoxide reductase chain A	DmsA	Anaerobic dimethyl sulfoxide reductase chain A	putative anaerobic dimethyl sulfoxide reductase, subunit A	Anaerobic dimethyl sulfoxide reductase chain A	Anaerobic dimethyl sulfoxide reductase subunit A	Residues 1 to 705 of 705 are 99 pct identical to residues 81 to 785 of a 785 aa protein from Escherichia coli K12 ref: NP_415414.1 anaerobic dimethyl sulfoxide reductase subunit A	Anaerobic dimethyl sulfoxide reductase chain A	IPR006311: Twin-arginine translocation pathway signal; IPR006655: Prokaryotic molybdopterin oxidoreductase; IPR006656: Molybdopterin oxidoreductase;IPR006657: Molydopterin dinucleotide binding domain;IPR006963: Molybdopterin oxidoreductase Fe4S4 domain anaerobic dimethyl sulfoxide reductase, subunit A	similar to Salmonella typhi CT18 anaerobic dimethyl sulfoxide reductase chain A precursor anaerobic dimethyl sulfoxide reductase chain A	Anaerobic dimethyl sulfoxide reductase, subunit A	anaerobic dimethyl sulfoxide reductase chain A	DMSO reductase; Similar to: HI1047, DMSA_HAEIN anaerobic dimethyl sulfoxide reductase chain A precursor	Anaerobic dimethyl sulfoxide reductase, subunit A	Code: C; COG: COG0243 anaerobic dimethyl sulfoxide reductase subunit A	Code: C; COG: COG0243 anaerobic dimethyl sulfoxide reductase subunit A	Code: C; COG: COG0243 anaerobic dimethyl sulfoxide reductase subunit A	molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, large subunit	Anaerobic dimethyl sulfoxide reductase chain A	Anaerobic dimethyl sulfoxide reductase chain A precursor	Anaerobic dimethyl sulfoxide reductase chain A	Anaerobic dimethyl sulfoxide reductase chain A precursor	Anaerobic dimethyl sulfoxide reductase chain A precursor	Molydopterin dinucleotide-binding region	Anaerobic dimethyl sulfoxide reductase chain A precursor	Anaerobic dimethyl sulfoxide reductase chain A	Anaerobic dimethyl sulfoxide reductase chain A	Anaerobic dimethyl sulfoxide reductase chain A	Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family precursor	
ECOLI00853	Anaerobic dimethyl sulfoxide reductase chain B	Anaerobic dimethyl sulfoxide reductase chain B	Anaerobic dimethyl sulfoxide reductase, chain B	Anaerobic dimethyl sulfoxide reductase subunit B	Residues 1 to 205 of 205 are 99 pct identical to residues 1 to 205 of a 205 aa protein from Escherichia coli K12 ref: NP_415415.1 anaerobic dimethyl sulfoxide reductase subunit B	Code: C; COG: COG0437 anaerobic dimethyl sulfoxide reductase subunit B	Anaerobic dimethyl sulfoxide reductase, subunit B	Anaerobic dimethyl sulfoxide reductase subunit B	anaerobic dimethyl sulfoxide reductase subunit B Code: C; COG: COG0437	anaerobic dimethyl sulfoxide reductase subunit B	Dimethylsulfoxide reductase, B subunit	Dimethyl sulfoxide reductase, anaerobic, subunit B	Dimethylsulfoxide reductase, B subunit	Dimethylsulfoxide reductase, chain B	Dimethylsulfoxide reductase, B subunit	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Dimethylsulfoxide reductase, B subunit	Dimethylsulfoxide reductase, B subunit	Anaerobic dimethyl sulfoxide reductase, B subunit	Anaerobic dimethyl sulfoxide reductase, B subunit	Anaerobic dimethyl sulfoxide reductase subunit B	Dimethyl sulfoxide reductase, anaerobic, subunit B	Dimethyl sulfoxide reductase, anaerobic, subunit B	Dimethyl sulfoxide reductase, anaerobic, subunit B	Dimethyl sulfoxide reductase, anaerobic, subunit B	Dimethyl sulfoxide reductase, anaerobic, subunit B	Dimethyl sulfoxide reductase, anaerobic, subunit B	
ECOLI00854	Anaerobic dimethyl sulfoxide reductase chain C	Anaerobic dimethyl sulfoxide reductase chain C	Anaerobic dimethyl sulfoxide reductase subunit C	Residues 22 to 284 of 284 are 91 pct identical to residues 1 to 287 of a 287 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286773.1 anaerobic dimethyl sulfoxide reductase subunit C	Anaerobic dimethyl sulfoxide reductase chain C	anaerobic dimethyl sulfoxide reductase, subunit C	Anaerobic dimethyl sulfoxide reductase, subunit C	anaerobic dimethyl sulfoxide reductase chain C	Anaerobic dimethyl sulfoxide reductase, subunit C	Code: R; COG: COG3302 anaerobic dimethyl sulfoxide reductase subunit C	Code: R; COG: COG3302 anaerobic dimethyl sulfoxide reductase subunit C	Code: R; COG: COG3302 anaerobic dimethyl sulfoxide reductase subunit C	Anaerobic dimethyl sulfoxide reductase, subunit C	Anaerobic dimethyl sulfoxide reductase chain C	Anaerobic dimethyl sulfoxide reductase subunit C	Anaerobic dimethyl sulfoxide reductase chain C	anaerobic dimethyl sulfoxide reductase subunit C Code: R; COG: COG3302	Anaerobic dimethyl sulfoxide reductase chain C	anaerobic dimethyl sulfoxide reductase subunit C	DMSO reductase anchor subunit	Anaerobic dimethyl sulfoxide (DMSO) reductase, subunit C	Putative uncharacterized protein	Anaerobic dimethyl sulfoxide reductase, C subunit	Dimethyl sulfoxide reductase, anaerobic, subunit C	Anaerobic dimethyl sulfoxide reductase, C subunit	Anaerobic dimethyl sulfoxide reductase, C subunit	DMSO reductase anchor subunit	Anaerobic dimethyl sulfoxide reductase, C subunit	Putative uncharacterized protein	
ECOLI00855	Uncharacterized protein ycaC	Probable hydrolase	Isochorismatase family protein	Hydrolase	Hydrolase, isochorismatase family	Protein ycaC	identified by match to protein family HMM PF00857 isochorismatase family protein	Putative isochorismatase	Putative isochorismatase	Putative isochorismatase	Putative uncharacterized protein ycaC	Residues 1 to 208 of 208 are 99 pct identical to residues 1 to 208 of a 208 aa protein from Escherichia coli O157:H7 ref: NP_309009.1 orf, conserved hypothetical protein	Isochorismatase hydrolase family	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative hydrolase	isochorismatase family hydrolase, putative	identified by match to protein family HMM PF00857 hydrolase, isochorismatase family	Code: Q; COG: COG1335 conserved hypothetical protein	Code: Q; COG: COG1335 conserved hypothetical protein	Isochorismatase hydrolase	Isochorismatase hydrolase	isochorismatase hydrolase	Isochorismatase hydrolase	Amidases related to nicotinamidase COG1335	Code: Q; COG: COG1335; orf conserved hypothetical protein	Putative uncharacterized protein	Isochorismatase hydrolase	isochorismatase hydrolase	Protein YcaC	isochorismatase hydrolase	
ECOLI00856	Uncharacterized MFS-type transporter ycaD	hypothetical protein	Transporter	Permease	Uncharacterized MFS-type transporter ycaD	putative transport protein	MFS-type transporter protein ycaD	Major facilitator family protein	Probable transport protein	TRANSPORTER, MFS superfamily	Putative MFS family transport protein	Uncharacterized MFS-type transporter ycaD	hypothetical protein, probable transmembrane transport protein	Permease of the major facilitator superfamily	Residues 1 to 382 of 382 are 99 pct identical to residues 1 to 382 of a 382 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286775.1 putative transport	Uncharacterized MFS-type transporter YPO1380/y2792.1/YP_1213	identified by similarity to GB:BAB53930.1 membrane protein, putative	IPR000276: Rhodopsin-like GPCR superfamily; IPR001064: Beta and gamma crystallin; IPR007114: Major facilitator superfamily putative MFS family transport protein	similar to Salmonella typhi CT18 probable transport protein probable transport protein	Uncharacterized MFS-type transporter YPTB1405	transporter, MFS superfamily	Major facilitator family transporter	Uncharacterized MFS-type transporter ycaD	Code: GEPR; COG: COG0477 putative transport	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative transport protein of the major facilitator family	Citation: Pao SS, Paulsen IT, Saier MH Jr. Microbiol Mol Biol Rev. (1998) 62(1):1-34. COG2814. pfam00083. Transporter, Major facilitator superfamily (MFS)	Code: GEPR; COG: COG0477 putative transport	major facilitator superfamily MFS_1	Code: GEPR; COG: COG0477 putative transport	
ECOLI00857	Inner membrane transporter ycaM	Putative uncharacterized protein CPE2075	Amino acid permease family protein	Probable transport protein	Putative transport	PotE	Amino acid transport protein	Amino acid permease	IPR002293: Amino acid/polyamine transporter, family I putative APC family, amino-acid transporter	similar to Salmonella typhi CT18 probable transport protein probable transport protein	Putative APC family, amino-acid transporter	Putative amino acid/polyamine transport protein	amino acid permease family protein identified by match to protein family HMM PF00324	amino acid permease family protein identified by match to protein family HMM PF00324	Putative amino-acid permease	Amino acid transporter, putative	Amino acid transporter	Amino acid transporter	Amino acid permease family protein	Putative uncharacterized protein	Amino acid permease family protein	Predicted transporter	Amino acid permease family protein	Amino acid permease-associated region	Amino acid permease family protein	Putative amino acid transport protein	Putative uncharacterized protein	Amino acid permease family protein	Amino acid permease family protein	
ECOLI00858	Uncharacterized HTH-type transcriptional regulator ycaN	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	transcriptional regulator, LysR family PFAM: regulatory protein, LysR LysR, substrate-binding KEGG: ecj:JW0883 predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	YcaN protein	Predicted DNA-binding transcriptional regulator	putative transcriptional regulator, LYSR-type	Predicted DNA-binding transcriptional regulator	
ECOLI00859	Uncharacterized NAD(P)H oxidoreductase ycaK	similar to uniprot|Q984W6 Rhizobium loti Quinone reductase Organism;	Putative uncharacterized protein	CDS_ID OB3182; P NAD(P)H oxidoreductase	probable NAD(P)H dehydrogenase	NAD(P)H oxidoreductase	NAD(P)H oxidoreductase	Similar to: HI1544, YF44_HAEIN putative NAD(P)H oxidoreductase	Putative NADPH-quinone reductase (modulator of drug activity B) MdaB protein	Code: R; COG: COG2249 conserved hypothetical protein	NAD(P)H dehydrogenase (quinone)	probable oxidoreductase; possible NAD(P)H dehydrogenase, quinone family	NAD(P)H2 dehydrogenase, quinone family	NAD(P)H dehydrogenase (quinone) PFAM: NAD(P)H dehydrogenase (quinone) KEGG: mes:Meso_3301 NAD(P)H dehydrogenase (quinone)	Putative NADPH-quinone reductase (modulator of drug activity B)	NAD(P)H dehydrogenase (quinone) PFAM: NAD(P)H dehydrogenase (quinone) NADPH-dependent FMN reductase KEGG: sbo:SBO_2185 hypothetical protein	Putative NAD(P)H oxidoreductase	Putative NAD(P)H oxidoreductase	NADPH-dependent FMN reductase	NAD(P)H dehydrogenase	NAD(P)H dehydrogenase	Conserved protein	NAD(P)H dehydrogenase	NAD(P)H dehydrogenase	NAD(P)H dehydrogenase	NAD(P)H dehydrogenase	Putative uncharacterized protein	NAD(P)H dehydrogenase	NAD(P)H dehydrogenase	
ECOLI00860	Pyruvate formate-lyase 1-activating enzyme	Pyruvate formate-lyase 1-activating enzyme	Pyruvate formate-lyase activating enzyme	Pyruvate formate-lyase activating enzyme	Pyruvate formate-lyase 1 activating enzyme	Pyruvate formate-lyase activating enzyme	Pyruvate formate-lyase activating enzyme	Act	Pyruvate-formate lyase-activating enzyme	Pyruvate formate-lyase 1 activating enzyme	Pyruvate formate-lyase-activating enzyme	Pyruvate formate-lyase-activating enzyme	Pyruvate formate-lyase activating enzyme	Pyruvate formate-lyase activating enzyme	Formate acetyltransferase activating enzyme	putative pyruvate formate-lyase 1 activating enzyme	Pyruvate formate-lyase 1-activating enzyme	Pyruvate formate-lyase-activating enzyme	identified by match to protein family HMM PF04055 pyruvate formate-lyase-activating enzyme	Pyruvate formate-lyase 1 activating enzyme	Pyruvate formate-lyase 1 activating enzyme	Pyruvate formate lyase activating enzyme	Putative pyruvate formate-lyase activating enzyme	Pyruvate formate-lyase-activating enzyme	Pyruvate formate-lyase 1 activating enzyme	Putative oxidoreductase	Pyruvate formate-lyase 1-activating enzyme	Pyruvate-formate-lyase-activating enzyme	Pyruvate formate-lyase 1 activating enzyme	
ECOLI00861	Formate acetyltransferase 1	Formate acetyltransferase	Formate acetyltransferase	Formate acetyltransferase	PflB	Formate acetyltransferase	Formate acetyltransferase 1	Pyruvate formate-lyase	Formate acetyltransferase	putative formate acetyltransferase	Formate acetyltransferase	Formate acetyltransferase	Formate acetyltransferase	Formate acetyltransferase	pseudo	Formate acetyltransferase 1	Pyruvate-formate lyase	Formate acetyltransferase	Pyruvate formate-lyase	Residues 1 to 760 of 760 are 99 pct identical to residues 1 to 760 of a 760 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286778.1 formate acetyltransferase 1	Formate acetyltransferase 1	Formate acetyltransferase I	Formate C-acetyltransferase	identified by similarity to SP:P09373; match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255 formate acetyltransferase	Formate C-acetyltransferase	Formate acetyltransferase	IPR001150: Formate C-acetyltransferase glycine radical pyruvate formate lyase I, induced anaerobically	similar to Salmonella typhi CT18 formate acetyltransferase 1 formate acetyltransferase 1	Formate acetyltransferase 1	
ECOLI00862	Probable formate transporter 1	Probable formate transporter	Putative uncharacterized protein CPE0094	Putative uncharacterized protein	Putative formate transporter 1	Probable formate transporter	putative formate transporter 1	Probable formate transporter 1	Formate transporter 1, putative	Probable formate transporter	Putative formate transporter	Putative formate transporter 1	Probable formate transporter 1	CDS_ID OB0770 formate dehydrogenase	Formate/nitrite family of transporter	Residues 59 to 343 of 343 are 99 pct identical to residues 1 to 285 of a 285 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286779.1 probable formate transporter (formate channel 1)	Putative formate transporter 1	Formate transporter 1 FocA	identified by match to protein family HMM PF01226 formate/nitrite transporter family protein	identified by similarity to SP:P21501 transporter, formate/nitrate family	NirC protein	IPR000292: Formate/nitrite transporter putative FNT family, formate transporter (formate channel 1)	similar to Salmonella typhi CT18 probable formate transporter (formate channel) probable formate transporter (formate channel)	Putative uncharacterized protein gbs1115	identified by match to PFAM protein family HMM PF01226 formate/nitrite transporter family protein	Putative FNT family formate efflux transporter focA	formate transporter	Similar to: HI0181, FOCA_HAEIN probable formate transporter	Formate transporter	
ECOLI00863	UPF0142 protein ycaO	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein STY0975	Putative uncharacterized protein	hypothetical protein	Hypothetical protein ycaO	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ycaO	Residues 9 to 597 of 597 are 99 pct identical to residues 1 to 589 of a 589 aa protein from Escherichia coli K12 ref: NP_415425.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YcaO of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Similar to: HI1265, YCAO_HAEIN conserved hypothetical protein	Uncharacterized ACR Hypothetical protein	Putative uncharacterized protein	Multidomain protein containing OsmC-like N-terminal domain and uncharacterized conserved domain	Putative cytoplasmic protein	conserved hypothetical protein	identified by similarity to OMNI:PP3620; match to protein family HMM PF02624; match to protein family HMM TIGR00702 conserved hypothetical protein	identified by match to protein family HMM PF02624; match to protein family HMM TIGR00702 YcaO-like fatty acid binding protein	Code: S; COG: COG1944 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG1944 conserved hypothetical protein	Protein of unknown function DUF181	
ECOLI00864	UPF0702 transmembrane protein ycaP	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Hypothetical protein ycaP	identified by match to protein family HMM PF04239 conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein ycaP	Putative uncharacterized protein	Uncharacterized conserved membrane protein, YCAP family	hypothetical protein	Putative uncharacterized protein lp_0762	COG2323 Predicted membrane protein hypothetical protein	Putative uncharacterized protein yviA	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein; possible membrane protein	Code: S; COG: COG2323 conserved hypothetical protein	Hypothetical membrane protein	membrane protein-like	hypothetical membrane protein	Code: S; COG: COG2323 conserved hypothetical protein	conserved hypothetical protein-putative membrane protein	
ECOLI00865	Phosphoserine aminotransferase	3-phosphoserine aminotransferase, catalyzes the formation of phosphoserine from 3-phosphohydroxypyruvate, required for serine and glycine biosynthesis; regulated by the general control of amino acid biosynthesis mediated by Gcn4p. [Source:SGD;Acc:S000005710]	similar to sp|P33330 Saccharomyces cerevisiae YOR184w SER1 phosphoserine transaminase, start by similarity	Putative phosphoserine aminotransferase [Source:GeneDB_Spombe;Acc:SPAC1F12.07]	similar to sp|P33330 Saccharomyces cerevisiae YOR184w SER1 phosphoserine transaminase singleton, start by similarity	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	DEHA2F02200p;similar to uniprot|P33330 Saccharomyces cerevisiae YOR184w SER1 phosphoserine transaminase and highly similar to CA2320|CaSER1 Candida albicans CaSER1;	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	putative phosphoserine aminotransferase	Phosphoserine aminotransferase	identified by match to protein family HMM PF00266; match to protein family HMM TIGR01364 phosphoserine aminotransferase	Phosphoserine aminotransferase	Phosphoserine aminotransferase	
ECOLI00866	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	Probable 3-phosphoshikimate 1- carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	Probable 3-phosphoshikimate 1- carboxyvinyltransferase	Probable 3-phosphoshikimate 1- carboxyvinyltransferase	Probable 3-phosphoshikimate 1- carboxyvinyltransferase	identified by match to TIGR protein family HMM TIGR01356 3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	Probable 3-phosphoshikimate 1- carboxyvinyltransferase	Probable 3-phosphoshikimate 1- carboxyvinyltransferase	Probable 3-phosphoshikimate 1- carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	putative 3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase), EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase),	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	3-phosphoshikimate 1-carboxyvinyltransferase	
ECOLI00867	Uncharacterized metalloprotease ycaL	Putative lipoprotein	Putative metalloprotease ycaL	Putative heat shock protein	Residues 1 to 262 of 262 are 99 pct identical to residues 1 to 262 of a 262 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286784.1 putative heat shock protein	IPR006025: Neutral zinc metallopeptidases, zinc-binding site putative Zn-dependent protease with chaperone function	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative Zn-dependent protease with chaperone function	Code: O; COG: COG0501 putative heat shock protein	Code: O; COG: COG0501 putative heat shock protein	Putative metalloprotease YcaL	Zn-dependent protease with chaperone function	Putative metalloprotease YcaL	peptidase M48, Ste24p PFAM: peptidase M48, Ste24p KEGG: jan:Jann_2687 peptidase M48, Ste24p	putative heat shock protein Code: O; COG: COG0501	Peptidase M48, Ste24p precursor	YcaL predicted peptidase with chaperone function	Peptidase, M48B family	Predicted peptidase with chaperone function	Peptidase, M48B family	Peptidase M48 Ste24p precursor	Peptidase, M48B family	Putative uncharacterized protein	Peptidase M48 Ste24p precursor	Peptidase, M48B family	Putative lipoprotein	Peptidase M48, Ste24p	Peptidase M48, Ste24p	Peptidase M48, Ste24p	
ECOLI00868	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	CYTIDYLATE KINASE;03_1270, CYTIDYLATE KINASE (CYTIDINE MONOPHOSPHATE KINASE), KCY_BACSU, gene found by Glimmer;	Cytidylate kinase	Cytidylate kinase	similar to GB:M14058, SP:P00736, PID:179644,  and PID:29539; identified by sequence similarity; putative cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	Cytidylate kinase	
ECOLI00869	30S ribosomal protein S1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	Ribosomal protein S1	30S ribosomal protein S1	30S ribosomal protein S1	30S ribosomal protein S1	similar to GB:M15841, SP:P08579,  and PID:340105; identified by sequence similarity; putative ribosomal protein S1	30S ribosomal protein S1	Ribosomal protein S1	Ribosomal protein S01	Ribosomal protein S1	30S ribosomal protein S1	30S ribosomal protein S1	RpS1	30S ribosomal protein S1	30S ribosomal protein S1	Ribosomal protein S1	Ribosomal protein S1, putative	Ribosomal protein S1	SSU ribosomal protein S1P	30S ribosomal protein S1	30S ribosomal protein S1	Probable 30S ribosomal protein S1	30S ribosomal protein S1	30S ribosomal protein S1	Ribosomal protein S1, putative	putative ribosomal protein S1	Ribosomal protein S1	30S ribosomal protein S1	
ECOLI00870	Integration host factor subunit beta	Integration host factor subunit beta	Integration host factor subunit beta	Integration host factor subunit beta	similar to GB:M95923,  and PID:553159; identified by sequence similarity; putative integration host factor beta subunit, putative	DNA-binding protein HU-alpha, putative	Integration host factor beta subunit	Integration host factor subunit beta	Integration host factor subunit beta	Integration host factor subunit beta	Integration host factor subunit beta	Integration host factor subunit beta	Integration host factor subunit beta	Integration host factor subunit beta	Integration host factor subunit beta	putative integration host factor, beta subunit	Probable DNA-binding protein HU	DNA-binding protein HU	Integration host factor subunit beta	similar to GB:M17517, GB:Y00716, GB:Y00716, GB:X07523, GB:Z29665, GB:X07525, SP:P08603, PID:1335095, PID:1354770, PID:180473, PID:31965, and PID:758073; identified by sequence similarity; putative integration host factor, beta subunit	Integration host factor beta-subunit, putative	Integration host factor subunit beta	Integration host factor subunit beta	Integration host factor beta-subunit	Integration host factor, beta subunit	Integration host factor subunit beta	PMID: 1644313 PMID: 7765961 PMID: 6300069 PMID: 3566914 PMID: 6540370 PMID: 7500343 best DB hits: BLAST: swissprot:P02346; DBH_BACST DNA-BINDING PROTEIN II (HB) (HU); E=2e-13 prf:1702428A; DNA binding protein HU [Bacillus caldolyticus]; E=1e-12 swissprot:P08821; DBH_BACSU DNA-BINDING PROTEIN II (HB) (HU); E=4e-12 COG: BS_hbs; COG0776 Bacterial nucleoid DNA-binding protein; E=4e-13 PFAM: PF00216; Bacterial DNA-binding protein; E=2.5e-29 probable DNA-binding protein HU	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE INTEGRATION HOST FACTOR BETA-SUBUNIT PROTEIN	Integration host factor subunit beta	
ECOLI00871	Uncharacterized protein ycaI	DNA uptake protein	DNA uptake/competence protein	Recombination protein 2	ComEC/Rec2 family protein	DNA internalization-related competence protein ComEC/Rec2	Competence protein ComA	Rec2	Putative uncharacterized protein	Rec2-related protein	Competence protein ComEC/Rec2, putative	Competence factor comEC	Putative competence-related protein	DNA internalization-related competence protein ComEC/Rec2	Related to ComE operon protein 3	ComEC protein	ComE operon protein 3	DNA internalization-related competence protein ComEC/Rec2	Putative membrane protein	hypothetical Rec2-related protein	Hypothetical protein ycaI	DNA internalization-related competence protein ComEC/Rec2	identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361 DNA internalization-related competence protein ComEC/Rec2	DNA internalization-related competence protein ComEC/Rec2	Rec2-related protein	pseudo	Putative competence protein	DNA internalization-related competence protein ComEC/Rec2	Putative competence-related protein	
ECOLI00872	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	putative transport ATP-binding protein MsbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Residues 1 to 582 of 582 are 99 pct identical to residues 1 to 582 of a 582 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286789.1 ATP-binding transport protein; multicopy suppressor of htrB	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein msbA	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp&membrane) transport protein; multicopy repressor of htrB	similar to Salmonella typhi CT18 probable transport ATP-binding protein MsbA probable transport ATP-binding protein MsbA	Lipid A export ATP-binding/permease protein msbA	phospholipid-lipopolysaccharide ABC transporter	ABC-type multidrug transport system, ATPase and permease components	Lipid A export ATP-binding/permease protein msbA	Lipid A export ATP-binding/permease protein MsbA	multicopy suppressor of htrB; Code: V; COG: COG1132 ATP-binding transport protein	multicopy suppressor of htrB; Code: V; COG: COG1132 ATP-binding transport protein	ABC transporter, transmembrane region	ABC transporter ATP-binding component	multicopy suppressor of htrB; Code: V; COG: COG1132 ATP-binding transport protein	
ECOLI00873	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	identified by match to PFAM protein family HMM PF02945 tetraacyldisaccharide 4`-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	putative tetraacyldisaccharide 4`-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	identified by match to PFAM protein family HMM PF02606 tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	Tetraacyldisaccharide 4'-kinase	
ECOLI00874	Uncharacterized protein ycaQ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative cytoplasmic protein	Hypothetical protein ycaQ	Putative uncharacterized protein	Conserved domain protein	best DB hits: BLAST: pir:B75319; conserved hypothetical protein - Deinococcus radiodurans; E=5e-47 gb:AAG55401.1; AE005281_4 (AE005281) orf, hypothetical protein; E=8e-17 swissprot:P75843; YCAQ_ECOLI HYPOTHETICAL 47.7 KDA PROTEIN IN; E=3e-16 COG: DR2072; COG3214 Uncharacterized BCR; E=5e-48 conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ycaQ	hypothetical protein	Putative uncharacterized protein	SCE33.09, hypothetical protein, len: 391 aa; similar to TR:AAF11622 (EMBL:AE002043) Deinococcus radiodurans conserved hypothetical protein DR2072, 360 aa; fasta scores: opt: 300 z-score: 355.4 E(): 2.5e-12; 30.1% identity in 362 aa overlap and to TR:Q9HZZ9 (EMBL:AE004711) Pseudomonas aeruginosa hypothetical protein PA2844, 402 aa; fasta scores: opt: 629 Z-score: 729.7 E(): 5.2e-33; 40.415% identity in 386 aa overlap conserved hypothetical protein SCE33.09	Residues 1 to 410 of 410 are 99 pct identical to residues 1 to 410 of a 410 aa protein from Escherichia coli K12 ref: NP_415436.1 orf, conserved hypothetical protein	identified by similarity to PIR:H97450; match to protein family HMM PF06224 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhimurium putative cytoplasmic protein putative cytoplasmic protein	Putative cytoplasmic protein	
ECOLI00875	UPF0434 protein ycaR	Putative uncharacterized protein	UPF0434 protein CC_0108	UPF0434 protein NMB0674	UPF0434 protein PM0859	UPF0434 protein PA2980	UPF0434 protein VV2354	UPF0434 protein Atu3696	UPF0434 protein ycaR	UPF0434 protein BPSL0877	conserved hypothetical protein	Protein ycaR	identified by match to PFAM protein family HMM PF03966 conserved hypothetical protein	UPF0434 protein VC_1876	UPF0434 protein BP2767	UPF0434 protein BB2007	UPF0434 protein SO_2800	UPF0434 protein ECA2555	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	UPF0434 protein PSPTO_3844	UPF0434 protein BPP2562	UPF0434 protein BMA2274	UPF0434 protein BMEII0403	UPF0434 protein ycaR	hypothetical protein	Conserved cytosolic protein	UPF0434 protein RPA0269	SCD84.08c, hypothetical protein, len: 56 aa; similar to SW:YCAR_ECOLI (EMBL:AE000193) Escherichia coli, hypotheical 6.9 kD protein in MsbA-KdsB intergenic region YcaR, 60 aa; fasta scores: opt: 159 z-score: 238.1 E(): 8.3e-06; 55.1% identity in 49 aa overlap hypothetical protein SCD84.08c	UPF0434 protein VV1_2087	
ECOLI00876	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	similar to GB:U07349,  and PID:531820; identified by sequence similarity; putative 3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	Putative CTP:CMP-3-deoxy-D-manno-octulosonate transferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	putative 3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	similar to SP:P04951; identified by sequence similarity; putative 3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	3-deoxy-manno-octulosonate cytidylyltransferase	
ECOLI00878	Uncharacterized protein ycbC	Sll1606 protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV2302	Putative uncharacterized protein	Putative membrane protein	Alr2467 protein	conserved hypothetical protein	Hypothetical protein ycbC	identified by match to PFAM protein family HMM PF02698 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	hypothetical protein	PUTATIVE MEMBRANE PROTEIN	Putative uncharacterized protein VP1033	Uncharacterized protein ycbC	hypothetical protein	DUF218	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 209 of 209 are 99 pct identical to residues 51 to 259 of a 259 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286795.1 orf, conserved hypothetical protein	Similar to probable membrane protein YcbC of Escherichia coli	Similar to hypothetical protein hypothetical protein	conserved gene membrane protein	Similar to hypothetical protein hypothetical protein	
ECOLI00877	Uncharacterized protein ycbJ	hypothetical protein	Hypothetical protein ycbJ	Putative uncharacterized protein	Uncharacterized protein ycbJ	Residues 1 to 297 of 297 are 100 pct identical to residues 1 to 297 of a 297 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286794.1 orf, conserved hypothetical protein	Putative uncharacterized protein	mukF protein (killing factor KicB)	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	MukF protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ycbJ	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	YcbJ conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ycbJ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	
ECOLI00879	Protein smtA	Probable S-adenosylmethionine-dependent methltransferase	Putative uncharacterized protein	SmtA protein	SmtA protein	putative SmtA protein	Protein smtA	SmtA protein	SmtA protein	Putative S-adenosylmethionine-dependent methyltransferase	SmtA protein	SmtA protein	S-adenosylmethionine-dependent methyltransferase	SmtA protein	Residues 5 to 265 of 265 are 99 pct identical to residues 1 to 261 of a 261 aa protein from Escherichia coli K12 ref: NP_415441.1 S-adenosylmethionine-dependent methyltransferase	Putative methyltransferase	S-adenosylmethionine-dependent methyltransferase	IPR000051: SAM (and some other nucleotide) binding motif; IPR001601: Generic methyltransferase S-adenosylmethionine-dependent methyltransferase	similar to Salmonella typhi CT18 SmtA protein SmtA protein	Putative methyltransferase	SAM methyltransferase SmtA	Methyltransferase, putative	SAM-dependent methyltransferase	S-adenosylmethionine-dependent methyltransferase	smtA protein	identified by similarity to SP:P36566 SmtA protein	smtA protein	putative methyltransferase	Code: QR; COG: COG0500 S-adenosylmethionine-dependent methyltransferase	
ECOLI00880	Chromosome partition protein mukF	Chromosome partition protein mukF	Chromosome partition protein mukF	Chromosome partition protein mukF	putative MukF protein	Chromosome partition protein mukF	Chromosome partition protein mukF	Chromosome partition protein mukF	Chromosome partition protein mukF	Chromosome partition protein mukF	Chromosome partition protein mukF	Residues 1 to 440 of 440 are 100 pct identical to residues 1 to 440 of a 440 aa protein from Escherichia coli K12 ref: NP_415442.1 mukF protein (killing factor KICB)	Chromosome partition protein mukF	Chromosome partition protein mukF	mukF protein (killing factor KICB)	similar to Salmonella typhi CT18 killing factor KicB killing factor KicB	Chromosome partition protein mukF	MukF protein	Similar to: HI1372, MUKF_HAEIN MukF homolog	Uncharacterized protein involved in chromosome partitioning MukF protein	Chromosome partition protein mukF	MukF protein	killing factor KICB; Code: D; COG: COG3006 MukF	killing factor KICB; Code: D; COG: COG3006 MukF	killing factor KicB	killing factor KICB; Code: D; COG: COG3006 MukF	Chromosome partition protein mukF	Putative killing factor protein	Chromosome partition protein mukF	
ECOLI00881	Chromosome partition protein mukE	Chromosome partition protein mukE	Chromosome partition protein mukE	Chromosome partition protein mukE	putative mukE protein	Chromosome partition protein mukE	Chromosome partition protein mukE	Chromosome partition protein mukE	Chromosome partition protein mukE	Chromosome partition protein mukE	Chromosome partition protein mukE	Residues 1 to 243 of 243 are 99 pct identical to residues 1 to 243 of a 243 aa protein from Escherichia coli pir: S43912 kicA protein	Chromosome partition protein mukE	Chromosome partition protein mukE	putative chromosome partitioning	similar to Salmonella typhi CT18 KicA protein KicA protein	Chromosome partition protein mukE	MukE protein	Similar to: HI1373, MUKE_HAEIN cell division protein MukE	Uncharacterized protein involved in chromosome partitioning MukE protein	Chromosome partition protein mukE	MukE protein	Code: D; COG: COG3095 conserved hypothetical protein	Code: D; COG: COG3095 conserved hypothetical protein	conserved hypothetical protein	Code: D; COG: COG3095; orf conserved hypothetical protein	MukE protein	Hypothetical protein	Protein involved in chromosome partitioning	
ECOLI00882	Chromosome partition protein mukB	weakly similar to sp|Q02455 Saccharomyces cerevisiae YKR095w MLP1 myosin-like protein, hypothetical start	similar to sp|P47037 Saccharomyces cerevisiae YJL074c SMC3 required for structural maintenance of chromosomes, start by similarity	SMC protein	Cytadherence high molecular weight protein 2	Chromosome partition protein mukB	Chromosome partition protein mukB	Chromosome partition protein mukB	Chromosome partition protein mukB	putative cell division protein MukB	Chromosome partition protein mukB	Chromosome partition protein mukB	Chromosome partition protein mukB	Chromosome segregation protein smc2	Chromosome partition protein mukB	Chromosome partition protein mukB	Chromosome segregation SMC protein	Chromosome partition protein mukB	Residues 1 to 1486 of 1486 are 99 pct identical to residues 1 to 1486 of a 1486 aa protein from Escherichia coli O157:H7 ref: NP_309034.1 kinesin-like cell division protein MukB	Chromosome partition protein mukB	Putative uncharacterized protein	Chromosome partition protein mukB	similar to Salmonella typhi CT18 cell division protein cell division protein	Chromosome partition protein mukB	cell division protein MukB	Similar to: HI1374, MUKB_HAEIN cell division protein MukB	Uncharacterized protein involved in chromosome partitioning MukB protein	Chromosome segregation SMC protein	Chromosome partition protein mukB	
ECOLI00883	Uncharacterized protein ycbB	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Putative exported protein	Putative uncharacterized protein	conserved hypothetical protein	Hypothetical protein ycbB	Putative uncharacterized protein	Putative exported protein	Putative amidase	Putative amidase	Uncharacterized protein conserved in bacteria	Residues 1 to 615 of 615 are 98 pct identical to residues 1 to 615 of a 615 aa protein from Escherichia coli K12 ref: NP_415445.1 putative amidase	Putative exported protein	pseudo	IPR001064: Beta and gamma crystallin; IPR002052: N-6 Adenine-specific DNA methylase putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative exported protein	Similar to: HI1667, YCBB_HAEIN conserved hypothetical protein	Putative periplasmic protein	Code: S; COG: COG2989 putative amidase	Putative uncharacterized protein	Code: S; COG: COG2989 putative amidase	conserved hypothetical protein	Code: S; COG: COG2989 putative amidase	Putative uncharacterized protein	Peptidoglycan-binding domain 1 protein precursor	Hypothetical protein precursor	
ECOLI00884	Uncharacterized protein ycbK	Uncharacterized protein HI1666	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV2114	Putative exported protein	Putative uncharacterized protein	hypothetical outer membrane protein	Hypothetical protein ycbK	Putative uncharacterized protein VC1269	Putative uncharacterized protein	Putative exported protein	Putative exported protein	Uncharacterized protein ycbK	Putative uncharacterized protein	Residues 4 to 185 of 185 are 100 pct identical to residues 1 to 182 of a 182 aa protein from Escherichia coli O157:H7 ref: NP_309036.1 orf, conserved hypothetical protein	Putative exported protein	Putative uncharacterized protein	Similar to putative exported protein YcbK of Escherichia coli	identified by match to protein family HMM PF05951; match to protein family HMM TIGR01409 Tat (twin-arginine translocation) pathway signal sequence domain protein	putative outer membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative exported protein	Tat (Twin-arginine translocation) pathway signal sequence domain protein	COG3108 conserved hypothetical protein	hypothetical membrane associated protein	Similar to: HI1666, YCBK_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Putative outer membrane protein	
ECOLI00885	Uncharacterized protein ycbL	Metallo-beta-lactamase family protein	Conserved protein	Putative uncharacterized protein	Metallo-beta-lactamase	Hypothetical protein	Uncharacterized protein HI1663	Zn-dependent hydrolase	Putative metallo-beta-lactamase	Putative hydrolase	Uncharacterized protein aq_2135	Putative uncharacterized protein	Hydroxyacylglutathione hydrolase related	hypothetical protein	Putative uncharacterized protein CPE1936	Glyoxalase II family protein	Glyoxalase II family protein	Putative uncharacterized protein	Putative uncharacterized protein	Glyoxylase II family protein	Putative uncharacterized protein	Probable hydrolase	Putative uncharacterized protein ycbL	Metallo-beta-lactamase family protein	Putative uncharacterized protein	Lmo2167 protein	Zn-dependent hydrolases, including glyoxylases	Uncharacterized protein ML0493	Putative metallo-beta-lactamase	
ECOLI00886	Aspartate aminotransferase	Aspartate aminotransferase, cytoplasmic [Source:GeneDB_Spombe;Acc:SPAC10F6.13c]	Aspartate aminotranferase	Aromatic-amino-acid aminotransferase	Aspartate aminotransferase	Aspartate aminotransferase	AspC	Aromatic-amino-acid aminotransferase	Aspartate aminotransferase	Aspartate aminotransferase	Probable aspartate aminotransferase	putative aspartate aminotransferase	Aspartate aminotransferase	Aspartate aminotransferase	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	Aspartate aminotransferase	Aspartate aminotransferase	PMID: 6378205 best DB hits: BLAST: swissprot:P44425; AAT_HAEIN ASPARTATE AMINOTRANSFERASE; E=1e-114 swissprot:P00509; AAT_ECOLI ASPARTATE AMINOTRANSFERASE; E=1e-112 pdb:1ART; Aspartate Aminotransferase (E.C.2.6.1.1) Complexed; E=1e-112 COG: HI1617; COG1448 Aspartate/aromatic aminotransferase; E=1e-115 PH1371; COG0436 PLP-dependent aminotransferases; E=1e-04 PFAM: PF00155; Aminotransferase class-I; E=1e-147 aspartate aminotransferase	predicted by Codon_usage predicted by Homology predicted by FrameD TYROSINE AMINOTRANSFERASE PROTEIN	Aspartate aminotransferase	Aromatic-amino-acid aminotransferase	Aspartate aminotransferase	Aspartate aminotransferase	Probable aspartate transaminase	Aspartate aminotransferase	Residues 1 to 396 of 396 are 99 pct identical to residues 1 to 396 of a 396 aa protein from Escherichia coli K12 ref: NP_415448.1 aspartate aminotransferase	Aspartate aminotransferase	AspC protein	
ECOLI00887	Outer membrane protein F	Outer membrane protein F	Outer membrane protein F	Outer membrane protein	Outer membrane protein 1a	Residues 1 to 362 of 362 are 99 pct identical to residues 1 to 362 of a 362 aa protein from Escherichia coli K12 ref: NP_415449.1 outer membrane protein 1a (Ia;b;F)	IPR001702: Porin, Gram-negative type; IPR001897: Porin, bacterial type outer membrane protein 1a (ia;b;f), porin	similar to Salmonella typhi CT18 outer membrane protein F precursor outer membrane protein F precursor	Outer membrane protein C2, porin	Outer membrane protein F	Code: M; COG: COG3203 outer membrane protein 1a (Ia;b;F)	Ia;b;F; Code: M; COG: COG3203 outer membrane protein 1a	porin, Gram-negative type	outer membrane protein (porin)	Code: M; COG: COG3203 outer membrane protein 1a (Ia;b;F)	Porin, Gram-negative type precursor	Outer membrane protein F	Hypothetical protein precursor	Outer membrane protein F	porin, Gram-negative type PFAM: porin, Gram-negative type KEGG: bcn:Bcen_3632 porin, gram-negative type	Outer membrane porin protein	outer membrane protein 1a (Ia;b;F) Code: M; COG: COG3203	Hypothetical protein precursor	OmpF outer membrane porin 1a (Ia;b;F)	Outer membrane porin	Porin, Gram-negative type precursor	Porin, Gram-negative type precursor	Putative uncharacterized protein	Outer membrane protein F	
ECOLI00888	Asparaginyl-tRNA synthetase	Mitochondrial asparaginyl-tRNA synthetase.  [Source:SGD;Acc:S000000618]	similar to sp|P25345 Saccharomyces cerevisiae YCR024c asn-tRNA synthetase, mitochondrial, hypothetical start	Asparaginyl-tRNA synthetase, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC1198.10c]	similar to sp|P25345 Saccharomyces cerevisiae YCR024c asn-tRNA synthetase, mitochondrial, start by similarity	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	similar to uniprot|P25345 Saccharomyces cerevisiae YCR024c asn-tRNA synthetase;	DEHA2C13750p;similar to uniprot|P25345 Saccharomyces cerevisiae YCR024C SLM5 Mitochondrial asparaginyl-tRNA synthetase;	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase	
ECOLI00889	Nicotinate phosphoribosyltransferase	nicotinate phosphoribosyltransferase;	Nicotinate phosphoribosyltransferase, acts in the salvage pathway of NAD%2B biosynthesis; required for silencing at rDNA and telomeres and has a role in silencing at mating-type loci; localized to the nucleus.  [Source:SGD;Acc:S000005735]	similar to sp|P39683 Saccharomyces cerevisiae Probable nicotinate phosphoribosyltransferase (EC 2.4.2.  11), start by similarity	Nicotinate phosphoribosyltransferase	Probable nicotinate phosphoribosyltransferase [Source:GeneDB_Spombe;Acc:SPAC1486.06]	highly similar to sp|P39683 Saccharomyces cerevisiae YOR209c NPT1 nicotinate phosphoribosyltransferase singleton, start by similarity	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	highly similar to uniprot|P39683 Saccharomyces cerevisiae YOR209c NPT1 nicotinate phosphoribosyltransferase;	DEHA2G23870p;similar to uniprot|P39683 Saccharomyces cerevisiae YOR209C NPT1 Nicotinate phosphoribosyltransferase acts in the salvage pathway of NAD+ biosynthesis;	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	putative nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	similar to SP:P18133; identified by sequence similarity; putative nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase	go_component: nucleus [goid 0005634]; go_function: nicotinate phosphoribosyltransferase activity [goid 0004516]; go_process: chromatin silencing at ribosomal DNA [goid 0000183]; go_process: chromatin silencing at telomere [goid 0006348]; go_process: nicotinate nucleotide salvage [goid 0019358] nicotinate phosphoribosyltransferase, putative	Nicotinate phosphoribosyltransferase	
ECOLI00890	Aminopeptidase N	Membrane alanine aminopeptidase	Aminopeptidase N	m1-family aminopeptidase	Membrane alanine aminopeptidase	Aminopeptidase N	Probable aminopeptidase N	Probable aminopeptidase N	Aminopeptidase N	Aminopeptidase N	PepN	Aminopeptidase N	Aminopeptidase N	Aminopeptidase N	Aminopeptidase N	Probable aminopeptidase N	Alanyl aminopeptidase	putative aminopeptidase N	PepN protein	Aminopeptidase N	identified by match to PFAM protein family HMM PF02525 aminopeptidase N	Aminopeptidase N	Aminopeptidase N	Aminopeptidase N	Aminopeptidase N	Aminopeptidase N	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE AMINOPEPTIDASE N PROTEIN	Aminopeptidase N	Aminopeptidase N	
ECOLI00891	Aliphatic sulfonates import ATP-binding protein ssuB	Aliphatic sulfonates import ATP-binding protein ssuB	Aliphatic sulfonates import ATP-binding protein ssuB	Aliphatic sulfonates import ATP-binding protein ssuB	Aliphatic sulfonates import ATP-binding protein ssuB 3	Aliphatic sulfonates import ATP-binding protein ssuB	Aliphatic sulfonates import ATP-binding protein ssuB	Aliphatic sulfonates import ATP-binding protein ssuB	Residues 1 to 255 of 255 are 95 pct identical to residues 1 to 255 of a 255 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286808.1 putative ATP-binding component of a transport system	Aliphatic sulfonates import ATP-binding protein ssuB	Aliphatic sulfonates import ATP-binding protein ssuB	nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein	Aliphatic sulfonates import ATP-binding protein ssuB 2	Aliphatic sulfonates import ATP-binding protein ssuB	Aliphatic sulfonates import ATP-binding protein ssuB	identified by match to protein family HMM PF00005 aliphatic sulfonates ABC transporter, ATP-binding protein	identified by match to protein family HMM PF00005 aliphatic sulfonates ABC transporter, ATP-binding protein	ABC transporter related	ABC transporter	Code: P; COG: COG1116 putative ATP-binding component of a transport system	ABC transporter-like	ABC transporter-like	ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit	Code: P; COG: COG1116 putative ATP-binding component of a transport system	Aliphatic sulfonates import ATP-binding protein ssuB 1	aliphatic sulfonate ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	Aliphatic sulfonates import ATP-binding protein ssuB	Putative aliphatic sulfonates transport ATP- binding protein	ABC transporter-related protein	
ECOLI00892	Putative aliphatic sulfonates transport permease protein ssuC	Probable permease of ABC transporter	ABC-type transporter, permease components	Putative aliphatic sulfonates transport permease protein	Putative aliphatic sulfonates transport permease protein ssuC	Putative aliphatic sulfonates transport permease protein	Aliphatic sulfonates ABC transporter, permease protein	Putative transporter	Aliphatic sulfonate ABC transporter, permease protein	Putative transport system permease protein	aliphatic sulfonate transport membrane component	Putative aliphatic sulfonate transport membrane component. Permease subunit of an ABC transporter	Residues 1 to 217 of 217 are 93 pct identical to residues 45 to 263 of a 263 aa protein SSUC_ECOLI sp: P75851 Putative aliphatic sulfonates transport permease protein ssuC	Putative aliphatic sulfonates transport permease protein	Putative aliphatic sulfonates transmembrane abc transporter protein	ABC transporter permease	ABC aliphatic sulfonates transporter, permease subunit	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter alkanesulfonate transport protein (ABC superfamily, membrane)	COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component	Sulfonate ABC transporter, permease protein SsuC	identified by match to protein family HMM PF00528 aliphatic sulfonates ABC transporter, permease protein	identified by match to protein family HMM PF00528 aliphatic sulfonates ABC transporter, permease protein	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	Code: P; COG: COG0600 putative transport system permease protein	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein	
ECOLI00893	Alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	pseudo	Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin- dependent oxidoreductases	Alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	identified by match to protein family HMM PF00296 alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	Putative alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	Residues 1 to 381 of 381 are 98 pct identical to residues 1 to 381 of a 381 aa protein from Escherichia coli O157:H7 ref: NP_309045.1 alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase protein	alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme FMNH(2)-dependent alkanesulfonate monooxygenase	Alkanesulfonate monooxygenase	alkanesulfonate monooxygenase	identified by similarity to SP:O85764; match to protein family HMM PF00296 alkanesulfonate monooxygenase	aliphatic sulfonate monooxygenase; RBL00791	luciferase-like	putative alkanesulfonate monooxygenase similarity:fasta; with=UniProt:SSUD_ECOLI (EMBL:ECO237695); Escherichia coli.; ssuD; Alkanesulfonate monooxygenase (EC 1.14.14.5) (FMNH2-dependent aliphatic sulfonate monooxygenase) (Sulfate starvation-induced protein 6) (SSI6).; length=380; id 59.714; 350 aa overlap; query 13-362; subject 2-350 similarity:fasta; with=UniProt:SSUD_AGRT5 (EMBL:AE008339); Agrobacterium tumefaciens (strain C58/ATCC 33970).; ssuD; Alkanesulfonate monooxygenase (EC 1.14.14.5) (FMNH2-dependent aliphatic sulfonate monooxygenase).; length=389; id 75.515; 388 aa overlap; query 11-396; subject 6-389	alkanesulfonate monooxygenase identified by match to protein family HMM PF00296	alkanesulfonate monooxygenase protein similar to ssuD (AGR_L_2796p) [Agrobacterium tumefaciens] Similar to entrez-protein:Q8UAE8 Putative location:bacterial cytoplasm Psort-Score: 0.0874; go_function: oxidoreductase activity [goid 0016491]; go_function: monooxygenase activity [goid 0004497]; go_function: alkanesulfonate monooxygenase activity [goid 0008726]	
ECOLI00894	Putative aliphatic sulfonates-binding protein	Alkanesulfonates-binding protein	Putative aliphatic sulfonates binding protein	identified by match to protein family HMM TIGR01728 sulfonate ABC transporter, sulfonate-binding protein, putative	Putative aliphatic sulfonates binding protein	Sulfonate ABC transporter, periplasmic sulfonate- binding protein, putative	Putative uncharacterized protein	Putative uncharacterized protein ycbO	Residues 1 to 319 of 319 are 99 pct identical to residues 3 to 321 of a 321 aa protein from Escherichia coli dbj: BAA35691.1 orf, conserved hypothetical protein	Putative aliphatic sulfonates binding protein	Putative alkanesulfonates binding signal peptide protein	InterProMatches:IPR010067 aliphatic sulfonate ABC transporter (binding lipoprotein)	Nitrate transport protein	ABC transporter, aliphatic sulfonates binding protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter alkanesulfonate transport protein (ABC superfamily, peri_bind)	alkanesulfonates-binding protein	identified by match to protein family HMM TIGR01728 sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative	ABC transporter, substrate-binding protein, aliphatic sulphonates	Code: P; COG: COG0715 conserved hypothetical protein	Code: P; COG: COG0715 conserved hypothetical protein	putative sulfonate binding protein precursor	Code: P; COG: COG0715; orf conserved hypothetical protein	Putative aliphatic sulfonates binding protein	Putative aliphatic sulfonates binding protein precursor	NLPA lipoprotein	Putative aliphatic sulfonates binding protein	ABC transporter, substrate-binding protein, aliphatic sulphonates	ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components	ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component	
ECOLI00895	FMN reductase	Putative uncharacterized protein	Lmo2351 protein	FMN reductase	NADPH-dependent FMN reductase	FMN reductase, NADH-dependent	NADPH-dependent FMN reductase	NADH-dependent FMN reductase	Putative uncharacterized protein ycbP	CDS_ID OB3079 NADH-dependent FMN reductase	NADH-dependent FMN reductase	NADH-dependent FMN reductase	Lin2445 protein	Residues 1 to 173 of 173 are 98 pct identical to residues 19 to 191 of a 191 aa protein from Escherichia coli K12 ref: NP_415457.1 orf, conserved hypothetical protein	Putative NAD(P)H-dependent FMN reductase	Probable nadph-dependent fmn reductase oxidoreductase protein	FMN reductase	Putative NAD(P)H-dependent FMN reductase	identified by similarity to SP:P80644; match to protein family HMM PF03358 FMN reductase, NADPH-dependent	FMN reductase	identified by similarity to SP:O85762; match to protein family HMM PF03358 NADH-dependent FMN reductase SsuE	FMN reductase	Code: R; COG: COG0431 conserved hypothetical protein	similar to gi|46908521|ref|YP_014910.1| [Listeria monocytogenes str. 4b F2365], percent identity 52 in 172 aa, BLASTP E(): 4e-45 putative FMN reductase NADPH-dependent	Code: R; COG: COG0431 conserved hypothetical protein	NADPH-dependent FMN reductase identified by match to protein family HMM PF03358	NADPH-dependent FMN reductase	FMN reductase start codon not provided	NADPH-dependent FMN reductase identified by match to protein family HMM PF02525; match to protein family HMM PF03358	
ECOLI00896	Uncharacterized fimbrial-like protein ycbQ	Putative fimbrial-like protein	Putative fimbrial protein	Putative fimbrial protein	Fimbrial protein	Code: NU; COG: COG3539 putative fimbrial-like protein	F17 fimbrial protein	Putative fimbrial protein precursor	Fimbrial protein precursor	Putative fimbrial protein precursor	Fimbrial protein	Fimbrial protein precursor	Fimbrial protein precursor	Fimbrial protein	Putative fimbrial adhesin protein	Predicted fimbrial-like adhesin protein	Fimbrial protein	Fimbrial protein precursor	Putative fimbrial protein	Putative uncharacterized protein	Major type 1 subunit fimbrin	Fimbrial protein precursor	Fimbrial protein precursor	Fimbrial protein	Fimbrial protein	Fimbrial protein	Fimbrial protein	Fimbrial protein	Putative fimbrial protein	
ECOLI00897	Uncharacterized fimbrial chaperone ycbR	Putative chaperone	Code: NU; COG: COG3121 putative chaperone	Auf fimbiral chaperone 1	putative chaperone Code: NU; COG: COG3121	Pili assembly chaperone precursor	Periplasmic pilus chaperone family protein	Predicted periplasmic pilin chaperone	Periplasmic pilus chaperone family protein	Pili assembly chaperone precursor	Periplasmic pilus chaperone family protein	Gram-negative pili assembly chaperone protein	Periplasmic pilus chaperone family protein	Putative fimbrial chaparone	Probable pili assembly chaperone	Putative periplasmic pilin chaperone	Putative periplasmic pilin chaperone	Putative periplasmic pilin chaperone	YcbR protein	Predicted periplasmic pilin chaperone	Predicted periplasmic pilin chaperone	predicted periplasmic pilin chaperone	Pili assembly chaperone, N-terminal	
ECOLI00898	Uncharacterized outer membrane usher protein ycbS	pseudo	Hypothetical outer membrane usher protein ycbS	Partial fimbrial usher protein	Residues 1 to 851 of 851 are 98 pct identical to residues 16 to 866 of a 866 aa protein from Escherichia coli K12 ref: NP_415460.1 putative outer membrane protein	Complete genome; segment 8/17	similar to Salmonella typhimurium fimbrial usher fimbrial usher	Fimbrial usher	identified by match to protein family HMM PF00577 fimbrial biogenesis usher protein, interruption-C	Fimbrial biogenesis outer membrane usher protein	Hypothetical outer membrane usher protein	Outer membrane usher protein AufC	Outer membrane usher protein precursor	putative outer membrane protein Code: NU; COG: COG3188	outer membrane usher protein precursor AufC	Fimbrial biogenesis outer membrane usher protein precursor	Putative uncharacterized protein	Outer membrane usher protein fimD	Predicted outer membrane usher protein	Outer membrane usher protein fimD homolog	Outer membrane usher protein fimD homolog	Putative uncharacterized protein	Outer membrane usher protein fimD homolog	Outer membrane usher protein, fimbrial-like	Fimbrial usher	Outer membrane usher protein FimD	Outer membrane usher protein FimD	Outer membrane usher protein FimD	Fimbrial usher protein	
ECOLI00899	Uncharacterized fimbrial-like protein ycbT	Residues 1 to 325 of 327 are 98 pct identical to residues 1 to 325 of a 326 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286816.1 homolog of Salmonella FimH protein	similar to Salmonella FimH protein; Code: NU; COG: COG3539 FimH-like protein	similar to Salmonella FimH; Code: NU; COG: COG3539 FimH-like protein	Putative fimbrial adhesin	fimbrial protein identified by similarity to GB:AAV78666.1	Type I pilus assembly protein FimE	FimH-like protein Code: NU; COG: COG3539	Putative fimbrial protein	Predicted fimbrial-like adhesin protein	Putative fimbrial protein	Fimbrial protein precursor	Putative fimbrial protein	Putative fimbrial protein	Putative fimbriae	Fimbrial protein	Putative fimbrial protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	YcbT protein	Putative uncharacterized protein	Predicted fimbrial-like adhesin protein	Predicted fimbrial-like adhesin protein	predicted fimbrial-like adhesin protein	Fimbrial protein	
ECOLI00900	Uncharacterized fimbrial-like protein ycbU	Putative minor fimbrial subunit	Putative uncharacterized protein	Residues 1 to 180 of 180 are 98 pct identical to residues 1 to 180 of a 180 aa protein from Escherichia coli K12 ref: NP_415462.1 putative fimbrial-like protein	fimbrial subunit	similar to Salmonella typhi CT18 fimbrial subunit fimbrial subunit	Fimbrial subunit	Code: NU; COG: COG3539 putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Auf fimbriae minor subunit AufD	putative fimbrial-like protein Code: NU; COG: COG3539	Putative uncharacterized protein	Fimbrial protein	Predicted fimbrial-like adhesin protein	Fimbrial protein	Fimbrial protein precursor	Fimbrial protein	Putative uncharacterized protein	Fimbrial protein	Fimbrial subunit	Fimbrial subunit	Fimbrial subunit	Fimbrial subunit	Fimbrial subunit	Fimbrial subunit	Fimbrial protein	Fimbrial subunit	Fimbrial subunit	Putative fimbrial protein	
ECOLI00901	Uncharacterized fimbrial-like protein ycbV	Putative fimbrial-like protein	Residues 1 to 187 of 187 are 99 pct identical to residues 1 to 187 of a 187 aa protein from Escherichia coli O157:H7 ref: NP_309054.1 putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Auf fimbriae minor subunit AufE	putative fimbrial-like protein Code: NU; COG: COG3539	Auf fimbriae minor subunit precursor AufD	Fimbrial protein	Fimbrial protein precursor	Putative major fimbrial subunit precursor	Predicted fimbrial-like adhesin protein	Fimbrial protein	Fimbrial protein precursor	Fimbrial protein	Fimbrial protein	Fimbrial protein	Fimbrial subunit	Putative fimbrial protein	Putative exported fimbrial-like adhesin protein	Putative exported fimbrial-like adhesin protein	Putative exported fimbrial-like adhesin protein	Putative minor fimbrial subunit AufD	Putative exported fimbrial-like adhesin protein	YcbV protein	Predicted fimbrial-like adhesin protein	Predicted fimbrial-like adhesin protein	predicted fimbrial-like adhesin protein	Fimbrial protein	
ECOLI00902	Uncharacterized fimbrial chaperone ycbF	Putative fimbrial chaperone	Putative chaperone	Residues 1 to 245 of 245 are 97 pct identical to residues 1 to 245 of a 245 aa protein from Escherichia coli K12 ref: NP_415464.1 putative chaperone	IPR001829: Bacterial pili assembly chaperone fimbrial chaparone	similar to Salmonella typhi CT18 fimbrial chaperone fimbrial chaperone	Fimbrial chaparone	Code: NU; COG: COG3121 putative chaperone	Code: NU; COG: COG3121 putative chaperone	Code: NU; COG: COG3121 putative chaperone	Putative fimbrial chaperone	Auf fimbrial chaperone 2	putative chaperone Code: NU; COG: COG3121	Putative uncharacterized protein	Periplasmic pilus chaperone family protein	Chaperone CupB4	Predicted periplasmic pilini chaperone	Periplasmic pilus chaperone family protein	Pili assembly chaperone precursor	Periplasmic pilus chaperone family protein	Pili assembly chaperone, N-terminal	Putative uncharacterized protein	Putative pili assembly chaperone	Fimbrial chaperone	Fimbrial chaperone	Fimbrial chaparone	Fimbrial chaperone	Fimbrial chaparone	Fimbrial chaperone	
ECOLI00903	Dihydroorotate dehydrogenase	similar to ca|CA4745|CaURA1 Candida albicans dihydroorotate dehydrogenase, start by similarity	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase-like protein	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	
ECOLI00905	Uncharacterized protein ycbX	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein ycbX	Putative uncharacterized protein	Putative uncharacterized protein	Putative iron-sulfur binding protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	MOSC domain protein	hypothetical protein	MOSC domain protein	Putative uncharacterized protein	Residues 1 to 369 of 369 are 98 pct identical to residues 1 to 369 of a 369 aa protein from Escherichia coli K12 ref: NP_415467.1 orf, conserved hypothetical protein	Putative iron-sulfur binding protein	Similar to probable iron-sulfur protein YcbX of Escherichia coli	Putative uncharacterized protein	Putative uncharacterized protein	putative iron-sulfur protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative iron-sulfur binding protein	oxidoreductase (iron-sulfur cluster biosynthesis)	Putative uncharacterized protein	Putative iron-sulfur protein	identified by match to protein family HMM PF03473; match to protein family HMM PF03476 MOSC domain protein	identified by match to protein family HMM PF03473; match to protein family HMM PF03476 MOSC domain protein	
ECOLI00904	Uncharacterized protein ycbW	Putative uncharacterized protein	conserved hypothetical protein	Hypothetical protein ycbW	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1599	Putative uncharacterized protein ycbW	Putative uncharacterized protein	Residues 1 to 192 of 192 are 98 pct identical to residues 1 to 192 of a 192 aa protein from Escherichia coli K12 ref: NP_415466.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to probable membrane protein YcbW of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	Evidence 5 : No homology to any previously reported sequences putative orphan protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein ycbW	Hypothetical protein	
ECOLI00906	UPF0020 protein ycbY	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	Predicted N6-adenine-specific DNA methylase	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	hypothetical N6-adenine-specific DNA methylase	Hypothetical protein ycbY	Ribosomal RNA large subunit methyltransferase L	Putative uncharacterized protein	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	Residues 1 to 702 of 702 are 99 pct identical to residues 1 to 702 of a 702 aa protein from Escherichia coli K12 ref: NP_415468.1 putative oxidoreductase	Ribosomal RNA large subunit methyltransferase L	Ribosomal RNA large subunit methyltransferase L	Similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	Similar to conserved hypothetical protein hypothetical protein	Ribosomal RNA large subunit methyltransferase L	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR000051: SAM (and some other nucleotide) binding motif; IPR000241: Putative RNA methylase; IPR002052: N-6 Adenine-specific DNA methylase;IPR002296: N6 adenine-specific DNA methyltransferase, N12 class putative N6-adenine-specific DNA methylase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Ribosomal RNA large subunit methyltransferase L	
ECOLI00907	ABC transporter ATP-binding protein uup	ABC transporter ATP-binding protein	ABC transporter ATP-binding protein uup-2	ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Uup1	Probable ATP-binding component of ABC transporter	ABC transport system ATP-binding protein	ABC-type transport system, ATPase component	ABC transporter, nucleotide binding/ATPase protein	ABC transporter ATP-binding protein	Putative ABC transport system, ATP-binding protein	putative ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein uup	ABC transporter, ATP-binding protein	Putative ABC transporter ATP-binding protein	Putative ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	PMID: 91035372 PMID: 88240299 best DB hits: BLAST: pir:B82536; ABC transporter ATP-binding protein XF2617 [imported] -; E=1e-130 swissprot:Q57242; UUP1_HAEIN ABC TRANSPORTER ATP-BINDING PROTEIN; E=1e-130 gb:AAK02961.1; (AE006126) Uup1 [Pasteurella multocida]; E=1e-129 COG: XF2617; COG0488 ATPase components of ABC transporters with; E=1e-131 uup; COG0488 ATPase components of ABC transporters with duplicated; E=1e-127 VC1486; COG0488 ATPase components of ABC transporters with; E=1e-126 PFAM: PF00006; ATP synthase alpha/beta famil; E=0.076 PF00005; ABC transporter; E=1.9e-51 PF01202; Shikimate kinase; E=0.76 ABC transporter ATP-binding protein uup-1	ABC transporter, ATP-binding protein	Putative ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Putative ATP-binding component of a transport system	ABC transporter, ATP-binding protein	ABC transporter, with duplicated ATPase domains	ATPase component of ABC transporter with duplicated ATPase domains	Residues 1 to 635 of 635 are 99 pct identical to residues 1 to 635 of a 635 aa protein from Escherichia coli K12 ref: NP_415469.1 putative ATP-binding component of a transport system	
ECOLI00908	Paraquat-inducible protein A	Putative inner membrane protein	putative paraquat-inducible protein A	Paraquat-inducible protein A	Paraquat-inducible protein A	Putative exported protein	Putative exported protein	Paraquat-inducible protein A	Putative exported protein	Paraquat-inducible protein A	Paraquat-inducible protein A	Residues 1 to 417 of 417 are 100 pct identical to residues 1 to 417 of a 417 aa protein from Escherichia coli K12 ref: NP_415470.1 paraquat-inducible protein A	Putative paraquat-inducible protein A	Paraquat-inducible protein A	paraquat-inducible protein A	similar to Salmonella typhi CT18 putative inner membrane protein putative inner membrane protein	Putative paraquat-inducible protein A	Hypothetical integral membrane protein	Paraquat-inducible membrane protein A	Paraquat-inducible protein A	Paraquat-inducible protein A	identified by match to protein family HMM PF04403; match to protein family HMM TIGR00155 integral membrane protein, PqiA family	Best Blastp Hit: pir||F81820 hypothetical integral membrane protein NMA1928 [imported] - Neisseria meningitidis (group A strain Z2491) >gi|7380560|emb|CAB85148.1| (AL162757) hypothetical integral membrane protein [Neisseria meningitidis]; PqiA putative paraquot-inducible protein A	Code: S; COG: COG2995 paraquat-inducible protein A	Conserved hypothetical protein 155	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative protein with paraquat-inducible domain	Code: S; COG: COG2995 paraquat-inducible protein A	paraquat-inducible protein A	paraquat-inducible protein A	
ECOLI00909	Paraquat-inducible protein B	Putative secreted protein	putative paraquat-inducible protein B	Paraquat-inducible protein B	Paraquat-inducible protein B	Paraquat-inducible protein B	Paraquat-inducible protein B	Paraquat-inducible protein B	Paraquat-inducible protein B	Residues 21 to 566 of 566 are 99 pct identical to residues 1 to 546 of a 546 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286826.1 paraquat-inducible protein B	Putative paraquat-inducible protein B	Paraquat-inducible protein B	identified by similarity to SP:P43671 paraquat-inducible protein, putative	paraquat-inducible protein B	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative paraquat-inducible protein B	Hypothetical integral membrane protein	Paraquat-inducible protein B	Paraquat-inducible protein B	identified by similarity to SP:P43671 putative paraquat-inducible protein B	Code: R; COG: COG3008 paraquat-inducible protein B	Paraquat-inducible protein B	Code: R; COG: COG3008 paraquat-inducible protein B	Mammalian cell entry-related protein	paraquat-inducible protein B	Mammalian cell entry related	Mammalian cell entry related-protein	Code: R; COG: COG3008 paraquat-inducible protein B	Mammalian cell entry related PFAM: Mammalian cell entry related: (5e-08) KEGG: sil:SPO1249 paraquat-inducible protein, putative, ev=1e-120, 36% identity	
ECOLI00910	Uncharacterized lipoprotein ymbA	Putative lipoprotein	conserved hypothetical protein	Hypothetical protein ymbA	Putative uncharacterized protein VC1755	Putative lipoprotein	Putative uncharacterized protein VP2019	Putative uncharacterized protein ymbA	Residues 1 to 187 of 187 are 100 pct identical to residues 1 to 187 of a 187 aa protein from Escherichia coli dbj: BAA35710.1 orf, conserved hypothetical protein	Putative lipoprotein protein	Similar to unknown protein YmbA of Escherichia coli	putative outer membrane protein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein protein	Putative lipoprotein	Uncharacterized conserved protein	Putative outer membrane protein	Best Blastp Hit: pir||H81820 probable lipoprotein NMA1930 [imported] - Neisseria meningitidis (group A strain Z2491) >gi|7380562|emb|CAB85150.1| (AL162757) putative lipoprotein [Neisseria meningitidis] conserved hypothetical protein	Code: S; COG: COG3009 conserved hypothetical protein	Protein of unknown function DUF330	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative membrane protein	Code: S; COG: COG3009 conserved hypothetical protein	putative lipoprotein protein	protein of unknown function DUF330	Code: S; COG: COG3009; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Hypothetical protein	Putative lipoprotein protein precursor	
ECOLI00911	Ribosome modulation factor	Ribosome modulation factor	Ribosome modulation factor	Ribosome modulation factor	Ribosome modulation factor	Ribosome modulation factor-related protein	Ribosome modulation factor	Ribosome modulation factor	Ribosome modulation factor	Putative ribosome modulation factor	Ribosome modulation factor	ribosome modulation factor (involved in dimerization of 70S ribosomes)	similar to Salmonella typhi CT18 ribosome modulation factor (protein E) ribosome modulation factor (protein E)	Putative ribosome modulation factor	ribosome modulation factor	Ribosome modulation factor	Ribosome modulation factor	Ribosome modulation factor	Code: J; COG: COG3130 ribosome modulation factor	Evidence 2b : Function of strongly homologous gene; Product type f : factor ribosome modulation factor	Code: J; COG: COG3130 ribosome modulation factor	ribosome modulation factor-related protein	Ribosome modulation factor	Ribosome modulation factor COG3130	Code: J; COG: COG3130 ribosome modulation factor	Ribosome modulation factor	Ribosome modulation factor	Ribosome modulation factor	ribosome modulation factor	
ECOLI00912	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	putative 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	similar to GP:15155033, and SP:P18391; identified by sequence similarity; putative 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE 3-HYDROXYDECANOYL-ACYL-CARRIER-PROTEIN DEHYDRATASE	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl carrier protein] dehydrase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein ] dehydratase	Residues 1 to 172 of 172 are 100 pct identical to residues 1 to 172 of a 172 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286829.1 beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	
ECOLI00913	Putative protease La homolog	Putative protease La homolog	Putative uncharacterized protein	Predicted ATP-dependent protease	Putative ATP-dependent protease LA	Putative uncharacterized protein	Hypothetical ATP-dependent protease LA-related protein	Putative protease La homolog	ATP-dependent protease LA-related protein	Putative uncharacterized protein	ATP-dependent protease LA-related protein	Putative ATP-dependent protease	Predicted ATP-dependent protease	ATP-dependent protease	Residues 1 to 586 of 586 are 98 pct identical to residues 1 to 586 of a 586 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286830.1 putative ATP-dependent protease	Putative Lon protease	ATP-dependent protease Lon	Similar to putative protease La homolog	IPR001984: Peptidase family S16 putative protease	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative Lon protease	ATP-dependent protease La	Similar to: HI1324, LONH_HAEIN putative protease La homolog, predicted ATP-dependent protease	Predicted ATP-dependent protease LonB protein	ATP-dependent serine protease LA	Putative protease	ATP-dependent protease Lon	Code: O; COG: COG1067 putative ATP-dependent protease	Code: O; COG: COG1067 putative ATP-dependent protease	
ECOLI00914	UPF0268 protein ycbG	UPF0268 protein PM0482	UPF0268 protein VV1664	UPF0268 protein ycbG	putative dehydrogenase	UPF0268 protein ycbG	UPF0268 protein VC_1481	Putative uncharacterized protein	UPF0268 protein VP1589	UPF0268 protein ycbG	UPF0268 protein VV1_2627	Residues 1 to 131 of 134 are 100 pct identical to residues 1 to 131 of a 150 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286831.1 putative dehydrogenase	UPF0268 protein YPO1433/y2737/YP_0877	UPF0268 protein plu1774	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0268 protein YPTB1452	putative dehydrogenase	Similar to: HI1323, YD23_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	UPF0268 protein ycbG	conserved hypothetical protein	Code: S; COG: COG3120 putative dehydrogenase	Code: S; COG: COG3120 putative dehydrogenase	conserved hypothetical protein	Code: S; COG: COG3120 putative dehydrogenase	UPF0268 protein ycbG	Hypothetical protein	UPF0268 protein ycbG	
ECOLI00915	Outer membrane protein A	Putative uncharacterized protein	Outer membrane protein	Outer membrane protein A	hypothetical outer membrane protein OmpA	Outer membrane protein A	Outer membrane protein OmpA	Outer membrane protein OmpA	Outer-membrane protein A	OmpA-like protein	Outer membrane protein A	OmpA-like protein	Outer membrane protein	Residues 25 to 372 of 372 are 94 pct identical to residues 1 to 350 of a 350 aa protein from Salmonella enterica subsp. enterica serovar Typhi ref: NP_455568.1 outer membrane protein A	Outer membrane protein A	Outer membrane protein A	IPR001035: MotY protein; IPR002368: OmpA outer membrane protein; IPR006664: Bacterial outer membrane protein;IPR006665: OmpA/MotB domain;IPR006690: OmpA-like domain putative hydrogenase, membrane component	similar to Salmonella typhi CT18 outer membrane protein A outer membrane protein A	Outer membrane protein A	outer membrane protein	OMP P5-homologous adhesin; Similar to: HI1164, OM53_HAEIN Outer membrane protein P5	Outer membrane protein and related peptidoglycan-associated (lipo)proteins OmpA protein	Outer membrane protein A	major outer membrane protein	Code: M; COG: COG2885 outer membrane protein 3a (II*;G;d)	II*;G;d; Code: M; COG: COG2885 outer membrane protein 3a	OmpA/MotB	outer membrane protein A precursor	II*;G;d; Code: M; COG: COG2885 outer membrane protein 3a	
ECOLI00916	Cell division inhibitor sulA	Cell division inhibitor	Cell division inhibitor sulA	Cell division inhibitor sulA	Residues 3 to 171 of 171 are 98 pct identical to residues 1 to 169 of a 169 aa protein from Escherichia coli O157:H7 ref: NP_309069.1 suppressor of lon	Cell division inhibitor sulA	Cell division inhibitor sulA	suppressor of lon; inhibitor of cell division and FtsZ ring formation upon DNA damage/inhibition, HslVU and Lon involved in its turnover	similar to Salmonella typhi CT18 cell division inhibitor cell division inhibitor	Cell division inhibitor sulA	Cell division inhibitor sulA	Code: D; COG: COG5404 suppressor of lon; inhibits cell division and ftsZ ring formation	inhibits cell division and ftsZ ring formation; Code: D; COG: COG5404 suppressor of lon	Cell division inhibitor sulA	Putative cell division inhibitor	Cell division inhibitor sulA	SOS-response cell division inhibitor blocks FtsZ ring formation-like KEGG: yps:YPTB1454 putative cell division inhibitor	Cell division inhibitor	Putative cell division inhibitor	Cell division inhibitor Code: D; COG: COG5404	Cell division inhibitor	SulA SOS cell division inhibitor; suppressor of lon; inhibits cell division and ftsZ ring formation	SOS cell division inhibitor SulA	Suppressor of lon; inhibitor of cell division and FtsZ ring formation upon DNA damage/inhibition	Putative uncharacterized protein	Cell division inhibitor SulA	Cell division inhibitor SulA	SOS cell division inhibitor	Cell division inhibitor SulA	
ECOLI00918	Inner membrane protein yccS	Putative uncharacterized protein	Uncharacterized protein HI1680	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted membrane protein	Putative membrane protein	Putative membrane protein	Putative efflux (PET) family transporter	Hypothetical protein yccS	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Membrane protein, TIGR01666	Putative membrane protein	Membrane protein, putative	Putative efflux (PET) family transporter	Putative uncharacterized protein	Predicted membrane protein	Residues 1 to 710 of 721 are 99 pct identical to residues 1 to 710 of a 720 aa protein from Escherichia coli O157:H7 ref: NP_309071.1 orf, conserved hypothetical protein	Putative membrane protein	Probable transmembrane protein	Similar to probable membrane protein YccS of Escherichia coli	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR005829: Sugar transporter superfamily putative efflux (PET) family transporter	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	
ECOLI00917	Protein sxy	Putative uncharacterized protein VV2306	Putative uncharacterized protein	hypothetical protein	Hypothetical protein yccR	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1028	Putative uncharacterized protein	Putative uncharacterized protein	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1787193 (210 aa). BLAST with identity of 99% in 137 aa. This CDS has been truncated.  The sequence has been checked and is believed to be correct. pseudo	Putative uncharacterized protein	Similar to probable membrane protein YccR of Escherichia coli	putative DNA transformation protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	DNA transformation protein TfoX	Regulator of competence-specific genes TfoX protein	Putative DNA transformation protein	possible DNA transformation protein	Code: K; COG: COG3070 conserved hypothetical protein	Code: K; COG: COG3070 conserved hypothetical protein	Code: K; COG: COG3070; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yccR	DNA transformation protein	Hypothetical protein	Hypothetical protein	
ECOLI00919	Inner membrane protein yccF	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein CPE0688	Membrane protein, putative	Putative uncharacterized protein	Putative uncharacterized protein	Predicted membrane protein	Putative membrane protein	Uncharacterized membrane protein	Putative uncharacterized protein	Hypothetical protein yccF	Membrane protein, putative	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VPA1284	Putative membrane protein	Putative uncharacterized protein yccF	similar to AE006977-3|AAK45134.1| percent identity: 58 in 128 aa conserved hypothetical protein	Conserved hyhpothetical protein	SCD39.10, possible integral membrane protein, len: 138 aa; similar to TR:O53882 (EMBL:AL022004) Mycobacterium tuberculosis hypothetical 13.7 kDa protein MTV043.63c, 129 aa; fasta scores: opt: 509 z-score: 623.4 E(): 3e-27; 63.1% identity in 122 aa overlap. Contains possible hydrophobic membrane spanning regions putative integral membrane protein	Predicted membrane protein	Residues 1 to 148 of 148 are 100 pct identical to residues 1 to 148 of a 148 aa protein from Escherichia coli K12 ref: NP_415481.1 orf, conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein	
ECOLI00920	Helicase IV	Probable helicase	DNA and RNA helicase	Helicase IV	hypothetical helicase IV	Helicase IV	Helicase IV	Helicase IV	Helicase IV	DNA helicase IV	Superfamily I DNA and RNA helicase	Residues 32 to 715 of 715 are 99 pct identical to residues 1 to 684 of a 684 aa protein from Escherichia coli K12 ref: NP_415482.1 DNA helicase IV	Putative helicase IV	DNA helicase IV	IPR000212: UvrD/REP helicase DNA helicase IV	similar to Salmonella typhi CT18 helicase IV (75 kD helicase) helicase IV (75 kD helicase)	Putative DNA helicase IV	helicase IV	DNA helicase IV	Code: L; COG: COG0210 DNA helicase IV	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 8335623; Product type e : enzyme putative helicase IV	Code: L; COG: COG0210 DNA helicase IV	DNA helicase IV	Code: L; COG: COG0210 DNA helicase IV	Helicase IV	Putative helicase IV	DNA helicase IV	putative helicase IV Orthologue of YPO1440	Helicase IV	
ECOLI00921	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	putative methylglyoxal synthase	Methylglyoxal synthase	MgsA protein	Methylglyoxal synthase	methylglyoxal synthase	identified by match to protein family HMM PF02142; match to protein family HMM TIGR00160 methylglyoxal synthase	similar to GB:U09086, GB:U09087, GB:U09088, GB:S76736, SP:P42166, SP:P42167, PID:508725, PID:508727, PID:508729, PID:885683, and PID:885684; identified by sequence similarity; putative methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Methylglyoxal synthase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE METHYLGLYOXAL SYNTHASE PROTEIN	methylglyoxal synthase	Methylglyoxal synthase	
ECOLI00922	UPF0319 protein yccT	UPF0319 protein PM0395	UPF0319 protein yccT	UPF0319 protein yccT precursor	UPF0319 protein VC_A0026	Putative uncharacterized protein	Putative exported protein	UPF0319 protein VP0761	UPF0319 protein yccT	Residues 1 to 220 of 220 are 100 pct identical to residues 1 to 220 of a 220 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286839.1 orf, conserved hypothetical protein	UPF0319 protein YPO1442/y2728/YP_1333	putative periplasmic protein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	UPF0319 protein YPTB1460	hypothetical membrane associated protein	Similar to: HI1681, YG81_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	UPF0319 protein yccT	This gene assignment is based partly on a multiple alignment of the best pairwise matches. conserved hypothetical protein	Code: S; COG: COG3110 conserved hypothetical protein	Code: S; COG: COG3110 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3110; orf conserved hypothetical protein	UPF0319 protein yccT	Hypothetical protein precursor	Hypothetical protein precursor	Hypothetical protein precursor	UPF0319 protein yccT	Hypothetical protein	

ECOLI00923	Uncharacterized protein yccU	Putative uncharacterized protein	Hypothetical protein	Vng0608c	Putative uncharacterized protein PH1109	Putative uncharacterized protein TVG0759889	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein Ta1005	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein PF0725	hypothetical protein	Succinyl-CoA synthetase	CoA-binding domain protein	Putative CoA binding domain containing protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	CoA binding domain family protein	Putative uncharacterized protein	Lmo1285 protein	Succinyl-CoA synthetase, alpha subunit-related enzymes	CoA-binding domain family protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein yccU	
ECOLI00924	Heat shock protein hspQ	Hypothetical protein yccV	Heat shock protein hspQ	Heat shock protein hspQ	Residues 1 to 122 of 122 are 100 pct identical to residues 1 to 122 of a 122 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286841.1 yccV gene product	Heat shock protein hspQ	Heat shock protein hspQ	Heat shock protein hspQ	Heat shock protein hspQ	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Heat shock protein hspQ	Uncharacterized conserved protein	Heat shock protein hspQ	ortholog to Escherichia coli bnum: b0966 conserved hypothetical protein	Code: S; COG: COG3785 conserved hypothetical protein	Hemimethylated DNA-binding region	Code: S; COG: COG3785 conserved hypothetical protein	Hemimethylated DNA-binding region protein	conserved hypothetical protein	uncharacterized conserved protein COG3785	Code: S; COG: COG3785; orf conserved hypothetical protein	Heat shock protein hspQ	Hypothetical protein	Heat shock protein hspQ	conserved hypothetical protein identified by match to protein family HMM TIGR02097	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG3785	
ECOLI00925	Ribosomal RNA large subunit methyltransferase I	Putative ribosomal RNA large subunit methyltransferase MJ1653	Putative uncharacterized protein	Hypothetical protein	Predicted SAM-dependent methyltransferase	Putative uncharacterized protein PH1915	Putative methyltransferase	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein PF0251	Putative uncharacterized protein CPE2548	Putative uncharacterized protein	Predicted SAM-dependent methyltransferase	Ribosomal RNA large subunit methyltransferase I	Putative uncharacterized protein	Putative uncharacterized protein	putative SAM-dependent methyltransferase	Putative uncharacterized protein	Hypothetical protein yccW	Putative uncharacterized protein	Ribosomal RNA large subunit methyltransferase I	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Ribosomal RNA large subunit methyltransferase I	Ribosomal RNA large subunit methyltransferase I	
ECOLI00927	Sulfurtransferase tusE	Sulfite reductase, desulfoviridin-type subunit gamma	Sulfurtransferase tusE homolog	Sulfite reductase, dissimilatory-type, gamma subunit	Putative uncharacterized protein	Putative uncharacterized protein	Dissimilatory sulfite reductase, gamma subunit	Sulfurtransferase tusE	Probable dissimilatory sulfite reductase, gamma subunit	putative sulfite reductase	Sulfurtransferase tusE	Sulfite reductase, dissimilatory-type subunit gamma	Sulfite reductase, gamma subunit-related protein	Putative uncharacterized protein	Sulfurtransferase tusE	Sulfurtransferase tusE	Putative uncharacterized protein	Sulfite reductase, gamma subunit-related protein	Sulfurtransferase tusE	Sulfurtransferase tusE	Dissimilatory sulfite reductase, gamma subunit	Residues 1 to 128 of 128 are 100 pct identical to residues 1 to 128 of a 128 aa protein from Escherichia coli K12 ref: NP_415489.1 putative sulfite reductase	Sulfurtransferase tusE	Sulfurtransferase tusE	Dissimilatory sulfite reductase, gamma subunit	putative sulfite reductase, gamma subunit	similar to Salmonella typhi CT18 hypothetical protein in helD-serT intergenic region hypothetical protein in helD-serT intergenic region	Sulfurtransferase tusE	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative sulfite reductase	
ECOLI00926	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Putative acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	hypothetical acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	Acylphosphatase	hypothetical acylphosphatase	Acylphosphatase	
ECOLI00928	Inner membrane protein yccA	Uncharacterized protein PM0402	Uncharacterized protein PA2604	Uncharacterized protein Cj0236c	Integral membrane protein	Putative membrane protein	putative carrier/transport protein	Inner membrane protein yccA	Uncharacterized membrane protein VC_1358	Membrane protein, putative	Putative membrane protein	Membrane protein, putative	Putative TEGT family carrier/transport protein	Putative carrier/transport protein	Integral membrane protein	Residues 1 to 219 of 219 are 99 pct identical to residues 1 to 219 of a 219 aa protein from Escherichia coli K12 ref: NP_415490.1 putative carrier-transport protein	Uncharacterized protein family UPF0005	YccA protein	Predicted membrane protein, similar to transporter hypothetical protein	conserved gene carrier/transport protein	Predicted membrane protein, similar to transporter hypothetical protein	identified by similarity to SP:O25578; match to protein family HMM PF01027 membrane protein, putative	IPR006213: Bax inhibitor 1 putative TEGT family carrier/transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	SecY stabilizing membrane protein	Similar to: HI0044, YCCA_HAEIN conserved hypothetical FtsH-interacting integral membrane protein	Integral membrane protein, interacts with FtsH Hypothetical protein	Membrane protein, putative	
ECOLI00929	Hydrogenase-1 small chain	Nickel-dependent hydrogenase, small subunit	F420-nonreducing hydrogenase	Hydrogenase small subunit	pseudo	Hydrogenase-1 small chain precursor	Putative uptake hydrogenase small subunit	Hydrogenase-1 small subunit	Residues 1 to 362 of 362 are 99 pct identical to residues 11 to 372 of a 372 aa protein from Escherichia coli K12 ref: NP_415491.1 hydrogenase-1 small subunit	IPR001821: Ni-Fe hydrogenase, small subunit hydrogenase-1 small subunit	Hydrogenase-1 small subunit	Ni,Fe-hydrogenase I small subunit	Code: C; COG: COG1740 hydrogenase-1 small subunit	hydrogenase protein small subunit	Code: C; COG: COG1740 hydrogenase 1 small subunit	hydrogenase (NiFe) small subunit (hydA)	Code: C; COG: COG1740 hydrogenase-1 small subunit	Ni-Fe hydrogenase, small subunit	Ni-Fe hydrogenase, small subunit	Hydrogenase-1 small chain	hydrogenase-1 small subunit	Hup-type Ni,Fe-hydrogenase small subunit similarity to COG1740 Ni,Fe-hydrogenase I small subunit(Evalue: 1E-117)	hydrogenase (NiFe) small subunit (hydA)	hydrogenase (NiFe) small subunit (hydA)	Hydrogenase-1 small chain	hydrogenase (NiFe) small subunit HydA KEGG: plt:Plut_1446 Ni-Fe hydrogenase, small subunit TIGRFAM: hydrogenase (NiFe) small subunit HydA PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein	ferredoxin hydrogenase, small chain Ferredoxin hydrogenase, small subunit. Homology to hoxK of A. eutrophus of 83% (sprot:MBHS_ALCEU). This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions. Tigrfam: hydA: hydrogenase (NiFe) small subunit Pfam: NADH ubiquinone oxidoreductase 20kD signal peptide no TMHs High confidence in function and specificity	hydrogenase (NiFe) small subunit HydA KEGG: rpd:RPD_1162 hydrogenase (NiFe) small subunit (HydA) TIGRFAM: hydrogenase (NiFe) small subunit HydA; Twin-arginine translocation pathway signal PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein	hydrogenase (NiFe) small subunit HydA KEGG: rsp:RSP_0495 hydrogenase protein small subunit TIGRFAM: hydrogenase (NiFe) small subunit HydA PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein	
ECOLI00930	Hydrogenase-1 large chain	Hydrogenase large subunit	Hydrogenase-1 large chain	Hydrogenase-1 large chain	Quinone-reactive Ni/Fe hydrogenase, large subunit	Putative uptake hydrogenase large subunit	Hydrogenase-1 large subunit	Residues 1 to 597 of 597 are 100 pct identical to residues 1 to 597 of a 597 aa protein from Escherichia coli K12 ref: NP_415492.1 hydrogenase-1 large subunit	similar to Salmonella typhi CT18 hydrogenase-1 large chain (nifE hydrogenase) hydrogenase-1 large chain (nifE hydrogenase)	Hydrogenase, large subunit	Hydrogenase-1 large subunit	Code: C; COG: COG0374 hydrogenase-1 large subunit	Code: C; COG: COG0374 hydrogenase 1 large subunit	Ni-Fe hydrogenase large chain	Code: C; COG: COG0374 hydrogenase-1 large subunit	hydrogenase large chain	Hydrogenase-1 large chain	quinone-reactive Ni/Fe hydrogenase HydB	hydrogenase-1 large subunit	Hup-type Ni,Fe-hydrogenase large subunit similarity to COG0374 Ni,Fe-hydrogenase I large subunit(Evalue: 0)	nickel-dependent hydrogenase, large subunit	Hydrogenase-1 large subunit	nickel-dependent hydrogenase, large subunit PFAM: nickel-dependent hydrogenase, large subunit KEGG: plt:Plut_1447 hydrogenase large chain	quinone-reactive Ni/Fe-hydrogenase large chain identified by match to protein family HMM PF00374	Nickel-dependent hydrogenase, large subunit	hydrogenase large chain High confidence in function and specificity	Nickel-dependent hydrogenase, large subunit	hydrogenase-1 large subunit Code: C; COG: COG0374	membrane-bound [NiFe] hydrogenase large subunit	
ECOLI00931	Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit	Nickel-iron hydrogenase, b-type cytochrome subunit	Nickel-dependent hydrogenases b-type cytochrome subunit	Ni/Fe hydrogenase B-type cytochrome subunit	Ni/Fe-hydrogenase B-type cytochrome subunit	Probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit	Probable Ni/Fe-hydrogenase, cytochrome subunit	Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit	Quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit	Quinone-reactive Ni/Fe-hydrogenase B-type cytochrome subunit	Quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit	Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit	Ni/Fe-hydrogenase 1 B-type cytochrome subunit	Residues 1 to 235 of 235 are 99 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286911.1 probable Ni-Fe-hydrogenase 1 b-type cytochrome subunit	identified by similarity to SP:P31875; match to protein family HMM PF01292 quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit	IPR000516: Nickel-dependent hydrogenase b-type cytochrome subunit putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit	similar to Salmonella typhi CT18 probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit	Ni/Fe hydrogenase cytochrome b subunit	Hydrogenase, cytochrome subunit	Cytochrome b-like protein	Putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit	Ni,Fe-hydrogenase I cytochrome b subunit	Nickel-dependent hydrogenase b-type cytochrome subunit	Ni, Fe hydrogenase I cytochrome b subunit	Code: C; COG: COG1969 probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit	Nickel-dependent hydrogenase b-type cytochrome subunit	Nickel-dependent hydrogenase b-type cytochrome subunit	Nickel-dependent hydrogenase b-type cytochrome subunit	Code: C; COG: COG1969 probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit	
ECOLI00932	Hydrogenase 1 maturation protease	Hydrogenase-1 operon protein HyaD	Hydrogenase 1 maturation protease	Processing of HyaA and HyaB proteins	Hydrogenase maturation protein hupD	Residues 1 to 195 of 195 are 98 pct identical to residues 1 to 195 of a 195 aa protein from Escherichia coli K12 ref: NP_415494.1 processing of HyaA and HyaB proteins	IPR000671: Hydrogen uptake protein putative hydrogenase maturation protease	similar to Salmonella typhi CT18 hydrogenase-1 operon protein HyaD hydrogenase-1 operon protein HyaD	Hydrogenase formation/expression protease HyaD/HupD	Hydrogenase accessory protein	Putative hydrogenase maturation protease	Peptidase M52, hydrogen uptake protein:Peptidase M52, hydrogenase expression/formation protein:Peptidase M52, hydrogenase maturation peptidase	Code: C; COG: COG0680 protein involved in processing of HyaA and HyaB proteins	HycI, hydrogenase maturation protease	processing of HyaA and HyaB proteins; Code: C; COG: COG0680 HyaD	hydrogenase expression/formation protein	Code: C; COG: COG0680 processor of HyaA and HyaB proteins	Peptidase M52, hydrogenase expression/formation protein	Peptidase M52, hydrogen uptake protein	Hydrogenase 1 maturation protease	processing of HyaA and HyaB proteins	hydrogenase expression/formation protein	hydrogenase expression/formation protein	Hydrogenase 1 maturation protease	hydrogenase expression/formation protein TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily PFAM: peptidase M52, hydrogen uptake protein KEGG: rsp:RSP_0499 HycI, hydrogenase maturation protease	hydrogenase expression/formation protein	Hydrogenase expression/formation protein	hydrogenase expression/formation protein hupD Hydrogenase expression/formation protein hupD, 54% identity,(63% simialrity) to SwissProt:Q03004. Aliases: hoxM(SwissProt:P40591), hyaD(E.coli). Has PF01750:Hydrogenase maturation protease;The family consists of hydrogenase maturation proteases. In E. coli HypI the hydrogenase maturation protease is involved in processing of HypE the large subunit of hydrogenases 3, by cleavage of its C-terminal. IPR000671:Peptidase_M52; TIGR00072; hydrog_prot; Signal P reporting SIgnal peptide Present. No TMH present. High confidence in function and specificity	hydrogenase expression/formation protein TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily PFAM: peptidase M52, hydrogen uptake protein KEGG: rpa:RPA0965 hydrogenase maturation protein hupD	
ECOLI00933	Hydrogenase-1 operon protein hyaE	Hydrogenase-1 operon protein hyaE	Processing of HyaA and HyaB proteins	Residues 1 to 132 of 132 are 98 pct identical to residues 1 to 132 of a 132 aa protein from Escherichia coli K12 ref: NP_415495.1 processing of HyaA and HyaB proteins	putative thiol-disulfide isomerase and thioredoxins	similar to Salmonella typhi CT18 hydrogenase-1 operon protein HyaE hydrogenase-1 operon protein HyaE	Putative thiol-disulfide isomerase and thioredoxin	protein involved in processing of HyaA and HyaB proteins	processing of HyaA and HyaB proteins HyaE	processor of HyaA and HyaB proteins	Hydrogenase-1 operon protein HyaE	hydrogenase-1 expression HyaE	Hydrogenase-1 operon protein HyaE	Hydrogenase-1 operon protein hyaE Hydrogenase-1 operon protein HyaE, 50% similarity to TrEMBL;Q8XGC7, 46% similarity to SwissProt;P19931. Alias: hupG Has PF07449:Hydrogenase-1 expression protein HyaE(IPR010893);This family contains bacterial hydrogenase-1 expression proteins approximately 120 residues long. This includes the E. coli protein HyaE, and the homologous proteins HoxO of R. eutropha and HupG of R.  leguminosarum. Deletion of the hoxO gene in R. eutropha led to complete loss of the uptake [NiFe] hydrogenase activity, suggesting that it has a critical role in hydrogenase assembly. No signal peptide or TMH reported present. High confidence in function and specificity	Hypothetical protein	processing of HyaA and HyaB proteins	HoxO	protein involved in processing of HyaA and HyaB proteins	Hydrogenase-1 expression HyaE	Hydrogenase-1 expression HyaE	Putative uncharacterized protein	Hydrogenase-1 expression protein HyaE	HyaE	Hydrogenase-1 expression protein HyaE	Hydrogenase-1 expression HyaE	Hydrogenase-1 expression protein HyaE	Putative uncharacterized protein	Hydrogenase-1 expression protein HyaE	Hydrogenase-1 operon protein HyaE	
ECOLI00934	Hydrogenase-1 operon protein hyaF	Hydrogenase-1 operon protein HyaF	Hydrogenase-1 operon protein hyaF	Nickel incorporation into hydrogenase-1 proteins	Hydrogenase expression/formation protein hupH	Residues 1 to 284 of 329 are 94 pct identical to residues 1 to 284 of a 285 aa protein from Escherichia coli K12 ref: NP_415496.1 nickel incorporation into hydrogenase-1 proteins	putative hydrogenase-1 protein	similar to Salmonella typhi CT18 hydrogenase-1 operon protein HyaF hydrogenase-1 operon protein HyaF	Putative hydrogenase expression/formation protein	Putative hydrogenase-1 protein	HupH hydrogenase expression protein, C-terminal conserved region	nickel incorporation into hydrogenase-1 proteins	pfam04809 Citation: Colbeau, A. et al. Mol.  Microbiol.8:15-29.1993.Organization of the genes necessary for hydrogenase expression in R.capsulatus HupH hydrogenase expression/formation protein	nickel incorporation into hydrogenase 1 proteins HyaF	HupH hydrogenase expression protein	original product: nickel incorporation into hydrogenase-1 proteins pseudo	hydrogenase expression/formation protein hupH	Hydrogenase-1 operon protein HyaF	HupH hydrogenase expression protein	Hydrogenase-1 operon protein HyaF	HupH hydrogenase expression protein PFAM: HupH hydrogenase expression protein KEGG: rsp:RSP_0502 HupH hydrogenase expression/formation protein	HupH hydrogenase expression protein PFAM: HupH hydrogenase expression protein KEGG: rpd:RPD_1169 HupH hydrogenase expression protein	HupH hydrogenase expression protein PFAM: HupH hydrogenase expression protein KEGG: rsp:RSP_0502 HupH hydrogenase expression/formation protein	Hydrogenase expression/formation protein hupH	nickel incorporation into hydrogenase-1 proteins	Hydrogenase expression/formation	hydrogenase-1 operon protein HyaF	HupH hydrogenase expression protein	Hydrogenase expression/formation protein	
ECOLI00935	Cytochrome bd-II oxidase subunit 1	Cytochrome oxidase, subunit I	pseudo	Cytochrome oxidase chain I	Cytochrome BD-II oxidase subunit I	PMID: 2843510 best DB hits: BLAST: pir:F72119; cytochrome oxidase chain I - Chlamydophila pneumoniae; E=3e-89 pir:A81721; cytochrome D ubiquinol oxidase, chain I TC0281; E=7e-86 pir:F71567; probable cytochrome oxidase chain I - Chlamydia; E=2e-85 COG: CPn0102; COG1271 Cytochrome bd-type quinol oxidase, subunit 1; E=3e-90 PFAM: PF01654; Bacterial Cytochrome Ubiquinol Ox; E=1.3e-170 cytochrome oxidase chain I	Probable third cytochrome oxidase, subunit I	Residues 3 to 516 of 516 are 99 pct identical to residues 1 to 514 of a 514 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286915.1 probable third cytochrome oxidase, subunit I	similar to Escherichia coli K12 probable third cytochrome oxidase, subunit I probable third cytochrome oxidase, subunit I	Similar to Bacillus anthracis cytochrome D ubiquinol oxidase, subunit I CydA-1 or BA1943 SWALL:Q81RU4 (EMBL:AE017030) (467 aa) fasta scores: E(): 4.9e-59, 36.93% id in 444 aa, and to Bacillus subtilis cytochrome D ubiquinol oxidase subunit I CydA or BSU38760 SWALL:CYDA_BACSU (SWALL:P94364) (468 aa) fasta scores: E(): 3.6e-53, 34.34% id in 463 aa putative cytochrome D ubiquinol oxidase, subunit I	Putative cytochrome oxidase, subunit I	Code: C; COG: COG1271 probable third cytochrome oxidase, subunit I	Code: C; COG: COG1271 probable third cytochrome oxidase, subunit I	cytochrome D ubiquinol oxidase subunit I start codon not provided Also similar to BAV3111 (54.6 38d.)	Code: C; COG: COG1271 probable third cytochrome oxidase, subunit I	Cytochrome BD-II oxidase subunit I	Probable third cytochrome oxidase, subunit I	cytochrome bd ubiquinol oxidase, subunit I PFAM: cytochrome bd ubiquinol oxidase, subunit I KEGG: aba:Acid345_3252 cytochrome bd ubiquinol oxidase, subunit I	Cytochrome bd ubiquinol oxidase, subunit I	Protein with universal conserved domains	probable third cytochrome oxidase, subunit I Code: C; COG: COG1271	Cytochrome bd ubiquinol oxidase, subunit I	cytochrome bd-II oxidase, subunit I	Putative uncharacterized protein	Cytochrome bd-II oxidase, subunit I	Cytochrome bd-II oxidase, subunit I	Cytochrome bd-II oxidase, subunit I	Cytochrome bd ubiquinol oxidase subunit I	Cytochrome bd-II oxidase, subunit I	
ECOLI00936	Cytochrome bd-II oxidase subunit 2	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome oxidase d subunit II	Cytochrome d ubiquinol oxidase subunit II	Cytochrome d oxidase subunit II	Probable cytochrome oxidase subunit II	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase subunit II	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome oxidase chain II	Cytochrome BD-II oxidase subunit II	identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203 cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase, subunit II	Cytochrome D ubiquinol oxidase subunit II	Probable third cytochrome oxidase, subunit II	Cytochrome d ubiquinol oxidase subunit II	Residues 1 to 378 of 378 are 99 pct identical to residues 1 to 378 of a 378 aa protein from Escherichia coli K12 ref: NP_415498.1 probable third cytochrome oxidase, subunit II	similar to Salmonella typhi CT18 probable cytochrome oxidase subunit II probable cytochrome oxidase subunit II	Putative cytochrome oxidase, subunit II	cytochrome d ubiquinol oxidase, subunit II	cytochrome bd ubiquinol oxidase, subunit II	Code: C; COG: COG1294 probable third cytochrome oxidase, subunit II	cytochrome d ubiquinol oxidase, subunit II	Cytochrome d ubiquinol oxidase, subunit II	Code: C; COG: COG1294 probable third cytochrome oxidase, subunit II	Code: C; COG: COG1294 probable third cytochrome oxidase, subunit II	putative transmembrane cytochrome bd-II oxidase subunit II similarity:fasta; SWALL:APPB_ECOLI (SWALL:P26458); Escherichia coli; cytochrome bd-II oxidase subunit II; AppB; synonyms=cyxb, cbdb; orderedlocusnames=b0979;; length 378 aa; 380 aa overlap; query 6-384 aa; subject 1-378 aa similarity:fasta; SWALL:Q8U8J9 (EMBL:AE009340); Agrobacterium tumefaciens str. C58; cytochrome d oxidase subunit ii; name=cydb; orderedlocusnames=atu4092;; length 385 aa; 385 aa overlap; query 1-384 aa; subject 1-385 aa	Cytochrome BD-II oxidase subunit II	Cytochrome bd-type quinol oxidase, subunit 2	
ECOLI00938	Periplasmic appA protein	Periplasmic phosphoanhydride phosphohydrolase	Periplasmic appA protein	Putative exported phosphatase	Phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic	Residues 1 to 442 of 442 are 97 pct identical to residues 1 to 444 of a 444 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286917.1 phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic	Phytase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark phosphoanhydride phosphohydrolase	Probable histidine acid phosphatase , 6-phytase	phytase	phosphoanhydride phosphohydrolase	Periplasmic phosphoanhydride phosphohydrolase	4-phytase	pH 2.5 acid phosphatase; periplasmic phosphoanhydride phosphorylase	pH 2.5 acid phosphatase; periplasmic phosphoanhydride phosphorylase	pH 2.5 acid phosphatase; periplasmic phosphoanhydride phosphorylase	Periplasmic AppA protein	Histidine acid phosphatase precursor	phosphoanhydride phosphohydrolase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Periplasmic AppA protein	Histidine acid phosphatase precursor	Probable histidine acid phosphatase precursor	6-phytase	Histidine acid phosphatase precursor	phosphoanhydride phosphorylase	Putative uncharacterized protein	Periplasmic AppA protein	Phosphoanhydride phosphohydrolase , 4-phytase multifunctional enzyme, probable	Phosphoanhydride phosphorylase	
ECOLI00939	Tyrosine-protein kinase etk	Putative uncharacterized protein	Alr2856 protein	Putative tyrosine kinase	Tyrosine-protein kinase etk	exopolysaccharide biosynthesis protein	Residues 1 to 648 of 648 are 99 pct identical to residues 79 to 726 of a 726 aa protein from Escherichia coli K12 ref: NP_415501.1 orf, conserved hypothetical protein	Capsular polysaccharide synthesis enzyme cpsD fused to Mrp family ATPase	identified by similarity to SP:P38134; match to protein family HMM PF02706 tyrosine-protein kinase	Code: M; COG: COG3206 conserved hypothetical protein	Code: M; COG: COG3206 conserved hypothetical protein	Protein-tyrosine kinase	Lipopolysaccharide biosynthesis	chain length determinant protein uncharacterized protein involved in exopolysaccharide biosynthesis COG3206	Code: M; COG: COG3206; orf conserved hypothetical protein	Protein-tyrosine kinase deleted EC_number 2.7.1.112	EpsB identified by match to protein family HMM PF02706; match to protein family HMM TIGR01005	exopolysaccharide transport protein family KEGG: bur:Bcep18194_C7398 exopolysaccharide transport protein TIGRFAM: exopolysaccharide transport protein family PFAM: lipopolysaccharide biosynthesis	lipopolysaccharide biosynthesis PFAM: lipopolysaccharide biosynthesis KEGG: aba:Acid345_3310 protein-tyrosine kinase	chain length determinant family protein	lipopolysaccharide biosynthesis PFAM: lipopolysaccharide biosynthesis KEGG: tma:TM0644 hypothetical protein	conserved hypothetical protein Code: M; COG: COG3206	protein tyrosin kinase involved in exopolysaccharide biosynthesis	Exopolysaccharide transport family protein	Lipopolysaccharide biosynthesis protein	Tyrosine-protein kinase etk	Non-specific protein-tyrosine kinase	Cryptic autophosphorylating protein tyrosine kinase Etk	Tyrosine-protein kinase etk	
ECOLI00940	Low molecular weight protein-tyrosine-phosphatase etp	Protein tyrosine phosphatase	protein-tyrosine phosphatase	Low molecular weight protein-tyrosine-phosphatase etp	Residues 1 to 152 of 152 are 98 pct identical to residues 1 to 152 of a 152 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286919.1 putative phosphatase	identified by match to protein family HMM PF01451 phosphotyrosine protein phosphatase	Protein-tyrosine phosphatase	protein tyrosine phosphatase	identified by match to protein family HMM PF01451 low molecular weight phosphotyrosine protein phosphatase family protein	Similar to O35016 YFKJ protein from Bacillus subtilis (156 aa). FASTA: opt: 391 Z-score: 494.5 E(): 1.2e-19 Smith-Waterman score: 391; 38.608 identity in 158 aa overlap. low molecular weight (LMW) phosphotyrosine protein phosphatase	protein tyrosine phosphatase	Code: T; COG: COG0394 putative phosphatase	Code: T; COG: COG0394 putative phosphatase	Protein-tyrosine-phosphatase COG0394	Code: T; COG: COG0394 putative phosphatase	transcript_id=ENSGACT00000015158	low molecular weight (LMW) phosphotyrosine protein phosphatase Similar to O35016 YFKJ protein from Bacillus subtilis (156 aa). FASTA: opt: 391 Z-score: 494.5 E(): 1.2e-19 Smith-Waterman score: 391; 38.608 identity in 158 aa overlap.	Protein-tyrosine-phosphatase	Complete genome	low molecular weight (LMW) phosphotyrosine protein phosphatase	putative phosphatase Code: T; COG: COG0394	low molecular weight (LMW) phosphotyrosine protein phosphatase	Low molecular weight phosphotyrosine protein phosphatase	Putative phosphotyrosine protein phosphatase	protein tyrosine phosphatase	Protein tyrosine phosphatase	Phosphotyrosine protein phosphatase	Putative phosphotyrosine protein phosphatase	Phosphotyrosine-protein phosphatase	
ECOLI00941	Putative polysaccharide export protein gfcE	Outer membrane capsular polysaccharide transport protein	All0495 protein	hypothetical protein	Putative polysaccharide export protein gfcE	Residues 8 to 386 of 386 are 100 pct identical to residues 1 to 379 of a 379 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286920.1 putative function in exopolysaccharide production	EPS I polysaccharide export outer membrane protein epsA	Evidence 2b : Function of strongly homologous gene; Product type m : membrane component polysaccharide export protein	identified by match to protein family HMM PF02563 capsular polysaccharide biosynthesis protein	Code: M; COG: COG1596 putative function in exopolysaccharide production	Code: M; COG: COG1596 putative function in exopolysaccharide production	Polysaccharide export protein	polysaccharide export protein	Code: M; COG: COG1596 putative function in exopolysaccharide production	Polysaccharide export protein	polysaccharide export protein PFAM: polysaccharide export protein KEGG: bur:Bcep18194_C7400 polysaccharide export protein	polysaccharide export protein PFAM: polysaccharide export protein KEGG: bcn:Bcen_4169 polysaccharide export protein	Putative outer membrane protein	putative function in exopolysaccharide production Code: M; COG: COG1596	exopolysaccharide export protein	Polysaccharide export protein precursor	Polysaccharide export protein precursor	Polysaccharide export protein precursor	Outer membrane lipoprotein, group 4 capsule (G4C) polysaccharide	Predicted exopolysaccharide export protein	Outer membrane lipoprotein, group 4 capsule (G4C) polysaccharide	Polysaccharide export protein precursor	Polysaccharide export outer membrane protein epsA	Outer membrane lipoprotein, group 4 capsule (G4C) polysaccharide	
ECOLI00942	Uncharacterized lipoprotein gfcD	Putative uncharacterized protein ymcA	Residues 1 to 698 of 698 are 98 pct identical to residues 1 to 698 of a 698 aa protein from Escherichia coli O157:H7 ref: NP_309167.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	conserved hypothetical protein	Putative lipoprotein	Conserved protein	Putative uncharacterized protein precursor	Group 4 capsule (G4C) polysaccharide, lipoprotein YmcA	Group 4 capsule (G4C) polysaccharide, lipoprotein YmcA	Putative uncharacterized protein	Putative uncharacterized protein ymcA	Predicted protein	Putative uncharacterized protein ymcA	YmcA protein	Conserved protein	Conserved protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI00943	Uncharacterized protein gfcC	Putative uncharacterized protein ymcB	Residues 1 to 248 of 248 are 99 pct identical to residues 1 to 248 of a 248 aa protein from Escherichia coli K12 ref: NP_415505.1 orf, conserved hypothetical protein	hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Conserved protein	Group 4 capsule (G4C) polysaccharide, YmcB	Putative uncharacterized protein precursor	Group 4 capsule (G4C) polysaccharide, YmcB	Putative uncharacterized protein	Group 4 capsule (G4C) polysaccharide, YmcB	Putative uncharacterized protein	Putative uncharacterized protein ymcB	Predicted protein	Putative uncharacterized protein ymcB	YmcB protein	Conserved protein	Conserved protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI00944	Uncharacterized lipoprotein gfcB	Putative regulator	Residues 1 to 214 of 214 are 96 pct identical to residues 1 to 214 of a 214 aa protein from Escherichia coli K12 ref: NP_415506.1 putative regulator	putative regulator	putative regulator	putative regulator	Hypothetical protein precursor	conserved hypothetical protein	putative regulator	Group 4 capsule (G4C) polysaccharide, lipoprotein YmcC	Putative regulator precursor	Predicted outer membrane lipoprotein	Group 4 capsule (G4C) polysaccharide, lipoprotein YmcC	Putative regulator precursor	Group 4 capsule (G4C) polysaccharide, lipoprotein YmcC	Group 4 capsule (G4C) polysaccharide, lipoprotein YmcC	Putative regulator	Putative outer membrane lipoprotein	Predicted outer membrane lipoprotein	Putative outer membrane lipoprotein	YmcC protein	Predicted outer membrane lipoprotein	Predicted outer membrane lipoprotein	predicted outer membrane lipoprotein	Predicted outer membrane lipoprotein	
ECOLI00945	Threonine-rich inner membrane protein gfcA	Residues 1 to 101 of 101 are 99 pct identical to residues 7 to 107 of a 107 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286924.1 orf, conserved hypothetical protein	hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	conserved hypothetical protein	Putative inner membrane protein	Predicted protein	Putative inner membrane protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative inner membrane protein	Putative uncharacterized protein	Putative inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein ymcD	Predicted protein	Putative uncharacterized protein ymcD	YmcD protein	Predicted protein	Predicted protein	conserved predicted protein	Putative inner membrane protein	

ECOLI00947	Insertion element IS1 4 protein insB	IS1 transposase PFAM: IS1 transposase KEGG: sec:SC1834 IS1 transposase	IS1 transposase	
ECOLI00948	Cold shock-like protein cspH	Cold shock-like protein cspH	Cold shock-like protein cspH	Residues 1 to 70 of 70 are 98 pct identical to residues 1 to 70 of a 70 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286925.1 cold shock-like protein	Code: K; COG: COG1278 cold shock-like protein	Code: K; COG: COG1278 cold shock-like protein	Code: K; COG: COG1278 cold shock-like protein	Cold shock-like protein CspH	Cold shock-like protein H	cold shock-like protein Code: K; COG: COG1278	Cold shock DNA-binding protein	Stress protein, member of the CspA-family	Cold shock DNA-binding protein	Cold-shock DNA-binding domain protein	Cold-shock DNA-binding domain protein CspH	Cold shock DNA-binding protein	Cold shock DNA-binding protein	Cold shock-like protein	Stress protein, member of the CspA-family	Stress protein, member of the CspA-family	Stress protein, member of the CspA-family	Stress protein, member of the CspA-family	Stress protein, member of the CspA-family	Stress protein, member of the CspA-family	Stress protein, member of the CspA-family	CspH protein	Stress protein, member of the CspA-family	Stress protein, member of the CspA-family	stress protein CspH member of the CspA-family	
ECOLI00949	Cold shock-like protein cspG	Cold shock-like protein cspG	Cold shock-like protein cspG	SCD35.12c, scoF2, cold shock protein, len: 67 aa; highly similar to SW:CSP7_STRCL (EMBL:X68245) Streptomyces clavuligerus cold shock-like protein 7.0 SC7.0, 66 aa; fasta scores: opt: 389 z-score: 532.0 E(): 3.3e-22; 87.9% identity in 66 aa overlap and to SW:CSPF_STRCO (EMBL:X92686) Streptomyces coelicolor cold shock protein ScoF, 67 aa; fasta scores: opt: 384 z-score: 525.4 E(): 7.8e-22; 78.8% identity in 66 aa overlap. Contains PS00352 'Cold-shock' DNA-binding domain signature cold shock protein	Residues 1 to 70 of 70 are 100 pct identical to residues 1 to 70 of a 70 aa protein from Escherichia coli O157:H7 ref: NP_309172.1 cold shock-like protein CspG	similar to Salmonella cold shock protein; Code: K; COG: COG1278 cold shock protein-like protein	similar to Salmonella cold shock protein; Code: K; COG: COG1278 CspG	Cold shock-like protein CspG	cold-shock DNA-binding domain protein PFAM: Cold-shock protein, DNA-binding SMART: Cold shock protein KEGG: xfa:XF2352 cold shock protein	Cold shock protein	Cold shock-like protein G	cold shock-like protein CspG Code: K; COG: COG1278	Cold shock protein	Cold shock DNA-binding protein	DNA-binding transcriptional regulator	Cold shock DNA-binding protein	Cold-shock DNA-binding domain protein	Cold shock DNA-binding protein	Cold shock DNA-binding protein	Cold-shock protein	Cold shock DNA-binding protein	Cold shock-like protein	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	
ECOLI00949	Cold shock-like protein cspG	Cold shock-like protein cspG	Cold shock-like protein cspG	SCD35.12c, scoF2, cold shock protein, len: 67 aa; highly similar to SW:CSP7_STRCL (EMBL:X68245) Streptomyces clavuligerus cold shock-like protein 7.0 SC7.0, 66 aa; fasta scores: opt: 389 z-score: 532.0 E(): 3.3e-22; 87.9% identity in 66 aa overlap and to SW:CSPF_STRCO (EMBL:X92686) Streptomyces coelicolor cold shock protein ScoF, 67 aa; fasta scores: opt: 384 z-score: 525.4 E(): 7.8e-22; 78.8% identity in 66 aa overlap. Contains PS00352 'Cold-shock' DNA-binding domain signature cold shock protein	Residues 1 to 70 of 70 are 100 pct identical to residues 1 to 70 of a 70 aa protein from Escherichia coli O157:H7 ref: NP_309172.1 cold shock-like protein CspG	similar to Salmonella cold shock protein; Code: K; COG: COG1278 cold shock protein-like protein	similar to Salmonella cold shock protein; Code: K; COG: COG1278 CspG	Cold shock-like protein CspG	cold-shock DNA-binding domain protein PFAM: Cold-shock protein, DNA-binding SMART: Cold shock protein KEGG: xfa:XF2352 cold shock protein	Cold shock protein	Cold shock-like protein G	cold shock-like protein CspG Code: K; COG: COG1278	Cold shock protein	Cold shock DNA-binding protein	DNA-binding transcriptional regulator	Cold shock DNA-binding protein	Cold-shock DNA-binding domain protein	Cold shock DNA-binding protein	Cold shock DNA-binding protein	Cold-shock protein	Cold shock DNA-binding protein	Cold shock-like protein	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	DNA-binding transcriptional regulator	
ECOLI00951	Protein gnsA	Protein gnsA	Residues 1 to 57 of 57 are 96 pct identical to residues 1 to 57 of a 57 aa protein YCCL_ECOLI sp: P52635 orf, conserved hypothetical protein	GnsA	Gns protein	Protein that affects unsaturated fatty acid abundance	GnsA protein	Transcriptional regulator, GnsA/GnsB family	Predicted regulator of phosphatidylethanolamine synthesis	GnsAGnsB family protein	Transcriptional regulator, GnsA/GnsB family	Transcriptional regulator, GnsA/GnsB family	Putative uncharacterized protein	Putative regulator of phosphatidylethanolamine synthesis	Putative regulator of phosphatidylethanolamine synthesis	Putative regulator of phosphatidylethanolamine synthesis	Putative regulator of phosphatidylethanolamine synthesis	Putative regulator of phosphatidylethanolamine synthesis	Predicted regulator of phosphatidylethanolamine synthesis	Putative regulator of phosphatidylethanolamine synthesis	GnsA protein	Predicted regulator of phosphatidylethanolamine synthesis	predicted regulator of phosphatidylethanolamine synthesis	GnsAGnsB family protein	
ECOLI00952	Putative electron transport protein yccM	Conserved hypothetical membrane protein	hypothetical iron-sulfur cluster-binding protein	Putative electron transport protein yccM	Iron-sulfur cluster-binding protein	Iron-sulfur cluster-binding protein	Putative electron transport protein	Putative uncharacterized protein yccM	Polyferredoxin	Residues 1 to 318 of 318 are 98 pct identical to residues 40 to 357 of a 357 aa protein from Escherichia coli K12 ref: NP_415512.1 orf, conserved hypothetical protein	identified by match to protein family HMM PF00037 iron-sulfur cluster-binding protein	hypothetical protein	Code: C; COG: COG0348 conserved hypothetical protein	4Fe-4S ferredoxin, iron-sulfur binding protein	Polyferredoxin-like	4Fe-4S ferredoxin, iron-sulfur binding	Putative electron transport protein YccM	4Fe-4S ferredoxin, iron-sulfur binding domain protein	hypothetical protein similarity to COG0348 Polyferredoxin(Evalue: 1E-83)	4Fe-4S ferredoxin, iron-sulfur binding	4Fe-4S ferredoxin, iron-sulfur binding domain protein	Putative electron transport protein YccM	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: aba:Acid345_3015 4Fe-4S ferredoxin, iron-sulfur binding	iron-sulfur cluster-binding protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: gme:Gmet_0297 4Fe-4S ferredoxin, iron-sulfur binding protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: sfr:Sfri_0773 4Fe-4S ferredoxin, iron-sulfur binding domain protein	4Fe-4S ferredoxin, iron-sulfur binding	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: son:SO4404 iron-sulfur cluster-binding protein	4Fe-4S ferredoxin, iron-sulfur binding protein	
ECOLI00953	Sensor protein torS	Sensor protein	Sensor protein	Hypothetical sensor protein TorS	Sensor protein torS	Sensor protein	Sensor protein	Sensor protein	Sensor protein torS	Sensor protein	Residues 1 to 809 of 809 are 97 pct identical to residues 85 to 894 of a 904 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286929.1 sensor protein torS (regulator TorR)	IPR001789: Response regulator receiver; IPR003660: Histidine kinase, HAMP region; IPR004358: Bacterial sensor protein, C-terminal;IPR005467: Histidine kinase;IPR008207: Hpt sensory kinase in multi-component regulatory system with TorR (regulator) and TorT (periplasmic sensor), regulates tor operon	similar to Salmonella typhi CT18 two-component sensor protein histidine protein kinase. two-component sensor protein histidine protein kinase.	Sensor protein	identified by similarity to SP:P39453; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor protein TorS	regulator TorR; Code: T; COG: COG0642 sensor protein torS	regulator TorR; Code: T; COG: COG0642 sensor protein torS	putative two-component sensor kinase	multi-sensor hybrid histidine kinase	Code: T; COG: COG0642 putative histidine kinase	Sensor protein	Multi-sensor hybrid histidine kinase precursor	Multi-sensor hybrid histidine kinase precursor	Sensor protein	integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein KEGG: jan:Jann_1731 periplasmic sensor signal transduction histidine kinase	sensor protein TorS	multi-sensor hybrid histidine kinase PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein KEGG: sfr:Sfri_1992 multi-sensor hybrid histidine kinase	response regulator receiver protein PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein KEGG: son:SO1230 sensor histidine kinase/response regulator TorS	putative sensor histidine kinase/response regulator	
ECOLI00955	TorCAD operon transcriptional regulatory protein torR	Torcad operon transcriptional regulatory protein TorR	TorCAD operon transcriptional regulatory protein torR	Residues 1 to 230 of 230 are 98 pct identical to residues 1 to 230 of a 230 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286931.1 response transcriptional regulator for torA (sensor TorS)	IPR000169: Eukaryotic thiol (cysteine) protease; IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response regulator in multi-component regualtory system wtih TorS (sensory kinase) and TorT (periplasmic sensor), regulates tor operon (TorR family)	similar to Salmonella typhimurium response regulator in multi-component regualtory system wtih TorS (sensory kinase) and TorT (periplasmic sensor), regulates tor operon (TorR family) response regulator in multi-component regualtory system wtih TorS (sensory kinase) and TorT (periplasmic sensor), regulates tor operon (TorR family)	Response regulator in multi-component regualtory system wtih TorS (Sensory kinase) and TorT	sensor TorS; Code: TK; COG: COG0745 response transcriptional regulator for torA	sensor TorS; Code: TK; COG: COG0745 response transcriptional regulator for torA	sensor TorS; Code: TK; COG: COG0745 response transcriptional regulator for torA	TorCAD operon transcriptional regulatory protein TorR	Two component transcriptional regulator, winged helix family protein	TorCAD operon transcriptional regulatory protein torR	two component transcriptional regulator, winged helix family PFAM: response regulator receiver; transcriptional regulator domain protein KEGG: sfr:Sfri_1990 two component transcriptional regulator, winged helix family protein	response transcriptional regulator for torA Code: TK; COG: COG0745	TorCAD operon transcriptional regulatory protein torR	response regulator receiver protein KEGG: son:SO1228 torcad operon transcriptional regulatory protein TorR	Two component transcriptional regulator, winged helix family	PFAM: response regulator receiver; transcriptional regulator domain protein KEGG: she:Shewmr4_1047 two component transcriptional regulator, winged helix family two component transcriptional regulator, winged helix family	Putative uncharacterized protein	TorCAD operon transcriptional regulatory protein TorR	Two component transcriptional regulator, winged helix family	DNA-binding response regulator in two-component regulatory system with TorS	TorCAD operon transcriptional regulatory protein TorR	Two component transcriptional regulator, winged helix family	TorCAD operon transcriptional regulatory protein TorR	Putative uncharacterized protein	Putative uncharacterized protein	TorCAD operon transcriptional regulatory protein TorR	
ECOLI00954	Periplasmic protein torT	Solute binding receptor protein	hypothetical periplasmic protein TorT	Periplasmic protein torT	Periplasmic protein TorT	Periplasmic protein TorT	Periplasmic protein TorT	Periplasmic protein torT	ABC-type sugar transport system, periplasmic component	Residues 1 to 342 of 342 are 99 pct identical to residues 1 to 342 of a 342 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286930.1 part of regulation of tor operon, periplasmic	similar to Salmonella typhi CT18 Solute binding receptor protein Solute binding receptor protein	periplasmic protein TorT precursor	Periplasmic sensor in multi-comopnent regulatory system with TorS (Sensory kinase) and TorR	identified by similarity to SP:P38683; match to protein family HMM PF00532 periplasmic protein TorT	part of regulation of tor operon, periplasmic; Code: G; COG: COG1879 TorT	Code: G; COG: COG1879 part of regulation of tor operon, periplasmic	part of regulation of tor operon, periplasmic; Code: G; COG: COG1879 TorT	periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator: (1.9e-18) KEGG: ppr:PBPRA1231 hypothetical periplasmic protein TorT, ev=9e-60, 36% identity	Periplasmic protein TorT	Periplasmic binding protein/LacI transcriptional regulator precursor	Periplasmic binding protein/LacI transcriptional regulator precursor	Periplasmic protein TorT	periplasmic protein TorT	TonB box domain protein TIGRFAM: TonB box domain protein PFAM: periplasmic binding protein/LacI transcriptional regulator KEGG: sfr:Sfri_1991 periplasmic binding protein/LacI transcriptional regulator	periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator KEGG: son:SO1229 periplasmic protein TorT	part of regulation of tor operon, periplasmic Code: G; COG: COG1879	Putative ABC transporter, substrate binding protein	Periplasmic binding protein/LacI transcriptional regulator precursor	periplasmic protein TorT	
ECOLI00956	Cytochrome c-type protein torC	Cytochrome c-type protein torC	Cytochrome c-type protein torC	Residues 32 to 421 of 421 are 99 pct identical to residues 1 to 390 of a 390 aa protein from Escherichia coli K12 ref: NP_415516.1 trimethylamine N-oxide reductase, cytochrome c-type subunit	IPR000345: Cytochrome c heme-binding site; IPR005126: NapC/NirT cytochrome c, N-terminal trimethylamine N-oxide reductase, cytochrome c-type subunit, also has activity as negativer regulator of tor operon	similar to Salmonella typhi Ty2 hypothetical protein hypothetical protein	Trimethylamine N-oxide reductase	Code: C; COG: COG3005 trimethylamine N-oxide reductase, cytochrome c-type subunit	Code: C; COG: COG3005 trimethylamine N-oxide reductase, cytochrome c-type subunit	Membrane-bound tetrahaem cytochrome TorC/YecK	Cytochrome c-type protein TorC	Cytochrome c-type protein TorC	NapC/NirT cytochrome c domain protein PFAM: NapC/NirT cytochrome c domain protein KEGG: rpc:RPC_1749 NapC/NirT cytochrome c-like	trimethylamine N-oxide reductase, cytochrome c-type subunit Code: C; COG: COG3005	cytochrome c-type protein TorC	Putative uncharacterized protein	Cytochrome c-type protein torC	NapC/NirT cytochrome c domain protein	Trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit	Cytochrome c-type protein torC	Trimethylamine-N-oxide reductase c-type cytochrome TorC precursor	Cytochrome c-type protein torC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Trimethylamine-N-oxide reductase c-type cytochrome TorC	Cytochrome c-type protein torC	Trimethylamine-N-oxide reductase c-type cytochrome TorC	Cytochrome c-type protein	
ECOLI00957	Trimethylamine-N-oxide reductase 1	putative trimethylamine-N-oxide reductase 1 precursor	Trimethylamine-N-oxide reductase 1 precursor	Trimethylamine-N-oxide reductase 1	similar to Escherichia coli K12 trimethylamine N-oxide reductase subunit gi: 1787231 (849 aa). BLAST with identity of 98% in 847 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	IPR006655: Prokaryotic molybdopterin oxidoreductase trimethylamine N-oxide reductase subunit	similar to Salmonella typhi CT18 trimethylamine-N-oxide reductase precursor trimethylamine-N-oxide reductase precursor	Trimethylamine-N-oxide reductase	Trimethylamine-N-oxide reductase 1	Trimethylamine-N-oxide reductase 1	trimethylamine N-oxide reductase subunit Code: C; COG: COG0243	trimethylamine-N-oxide reductase 1 precursor	Putative uncharacterized protein	Trimethylamine-N-oxide reductase	Molybdopterin guanine dinucleotide-containing S/N -oxide reductase precursor	Trimethylamine N-oxide (TMAO) reductase I, catalytic subunit	Trimethylamine-N-oxide reductase	Molybdopterin guanine dinucleotide-containing S/N -oxide reductase precursor	Trimethylamine-N-oxide reductase	Putative uncharacterized protein	Molybdopterin oxidoreductase	Trimethylamine-N-oxide reductase	Trimethylamine-N-oxide reductase TorA	Trimethylamine-N-oxide reductase TorA	Trimethylamine-N-oxide reductase TorA	Trimethylamine-N-oxide reductase	Trimethylamine-N-oxide reductase TorA	Trimethylamine-N-oxide reductase	Trimethylamine-N-oxide reductase TorA	
ECOLI00958	Chaperone protein torD	Chaperone protein torD	Chaperone protein torD	putative torD protein	Chaperone protein torD	Chaperone protein torD	Chaperone protein torD	Chaperone protein torD	Chaperone protein torD	Chaperone protein torD	cytoplasmic chaperone which interacts with TorA	similar to Salmonella typhi CT18 TorD protein TorD protein	chaperone protein TorD	Chaperone protein torD	identified by similarity to SP:P36662; similarity to GP:3327032; match to protein family HMM PF06192 TorA-specific chaperone	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases. Likely cytoplasmic chaperone for DorA/DMSO reductase structural gene dorD expt. in R.capsulatus [Microbiology. 1999, 145, 1409-20] Citation: J. Bacteriol. 179 (24), 7617-7624 (1997)-Rhodobacter sphaeroides DMSO-membrane protein	Code: R; COG: COG3381 part of trimethylamine-N-oxide oxidoreductase	Code: R; COG: COG3381 part of trimethylamine-N-oxide oxidoreductase	Chaperone protein torD	Cytoplasmic chaperone TorD family protein	Cytoplasmic chaperone TorD family protein	Chaperone protein TorD	Possible chaperone protein	chaperone protein TorD identified by match to protein family HMM PF06192	cytoplasmic chaperone TorD family protein PFAM: cytoplasmic chaperone TorD family protein KEGG: sfr:Sfri_1993 cytoplasmic chaperone TorD family protein	Chaperone protein TorD	cytoplasmic chaperone TorD family protein PFAM: cytoplasmic chaperone TorD family protein KEGG: son:SO1231 TorA specific chaperone	cytoplasmic chaperone TorD family protein PFAM: cytoplasmic chaperone TorD family protein KEGG: rsp:RSP_3047 DMSO-membrane protein	Cytoplasmic chaperone TorD family protein	
ECOLI00959	Chaperone modulatory protein cbpM	Chaperone-modulator protein cbpM	Chaperone modulatory protein cbpM	Residues 6 to 106 of 106 are 100 pct identical to residues 1 to 101 of a 101 aa protein from Escherichia coli O157:H7 ref: NP_309181.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Chaperone modulatory protein cbpM	Chaperone modulatory protein cbpM	conserved hypothetical protein	conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Chaperone modulatory protein cbpM	Hypothetical protein	Hypothetical protein	Chaperone modulatory protein cbpM	conserved hypothetical protein KEGG: hch:HCH_00523 hypothetical protein	Transcriptional regulator, MerR family	Hypothetical protein	conserved hypothetical protein Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein	conserved hypothetical protein	Transcriptional regulator, MerR family	Chaperone modulatory protein cbpM	Putative uncharacterized protein yccD	Putative uncharacterized protein	
ECOLI00960	Curved DNA-binding protein	DnaJ domain protein	DnaJ protein	Chaperone protein dnaJ 2	Curved DNA-binding protein	Heat shock protein	Curved DNA-binding protein	Curved DNA-binding protein	Curved DNA-binding protein	Residues 1 to 306 of 306 are 99 pct identical to residues 1 to 306 of a 306 aa protein from Escherichia coli K12 ref: NP_415520.1 curved DNA-binding protein; functions closely related to DnaJ	Similar to curved DNA-binding protein (sequence similarity to chaperone protein dnaJ) hypothetical protein	conserved gene curved DNA binding protein DnaJ	Similar to curved DNA-binding protein (sequence similarity to chaperone protein dnaJ) hypothetical protein	IPR001623: Heat shock protein DnaJ, N-terminal; IPR003095: Heat shock protein DnaJ curved DNA-binding protein	similar to Salmonella typhi CT18 curved DNA-binding protein curved DNA-binding protein	Heat shock protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type f : factor curved DNA-binding protein	Curved DNA-binding protein	DnaJ-class molecular chaperone	Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal	functions closely related to DnaJ; Code: O; COG: COG2214 curved DNA-binding protein	Heat shock protein DnaJ-like	Evidence 2b : Function of strongly homologous gene; PubMedId : 8824642, 11544239; Product type mc : molecular chaperone curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family)	functions closely related to DnaJ; Code: O; COG: COG2214 curved DNA-binding protein	putative heat shock protein, DnaJ family	heat shock protein DnaJ-like	heat shock protein DnaJ-like	heat shock protein DnaJ-like protein	Chaperone DnaJ-like	
ECOLI00961	Uncharacterized protein yccE	Residues 1 to 417 of 418 are 91 pct identical to residues 1 to 417 of a 418 aa protein from Escherichia coli K12 ref: NP_415521.1 orf, conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yccE	Putative uncharacterized protein yccE	Putative uncharacterized protein yccE	pseudo	YccE protein	Predicted protein	pseudo conserved predicted protein, N-terminal fragment	Putative uncharacterized protein	
ECOLI00962	Glucose-1-phosphatase	Glucose-1-phosphatase	Periplasmic glucose-1-phosphatase	Residues 9 to 421 of 421 are 98 pct identical to residues 1 to 413 of a 413 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286939.1 periplasmic glucose-1-phosphatase	IPR000560: Histidine acid phosphatase glucose-1-phosphatase	similar to Salmonella typhi CT18 glucose-1-phosphatase precursor (G1Pase), secreted glucose-1-phosphatase precursor (G1Pase), secreted	Glucose-1-phosphatase	Glucose-1-phosphatase	periplasmic glucose-1-phosphatase	periplasmic glucose-1-phosphatase	Glucose-1-phosphatase	Periplasmic glucose-1-phosphatase	Putative phosphatase precursor	periplasmic glucose-1-phosphatase	glucose-1-phosphatase/inositol phosphatase	Glucose-1-phosphatase precursor	Glucose-1-phosphatase	Putative uncharacterized protein	Glucose-1-phosphatase	Glucose-1-phosphatase precursor	Putative glucose-1-phosphatase precursor (G1Pase), secreted	Glucose-1-phosphatase/inositol phosphatase	Glucose-1-phosphatase	Glucose-1-phosphatase precursor	Glucose-1-phosphatase	Putative uncharacterized protein	Putative uncharacterized protein	Glucose-1-phosphatase	Histidine acid phosphatase	
ECOLI00963	Uncharacterized protein yccJ	Hypothetical protein yccJ	Uncharacterized protein yccJ	Residues 1 to 75 of 75 are 100 pct identical to residues 1 to 75 of a 75 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_286940.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative cytoplasmic protein YccJ	Putative uncharacterized protein yccJ	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yccJ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yccJ	Putative uncharacterized protein	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative cytoplasmic protein	
ECOLI00964	Flavoprotein wrbA	Flavoprotein wrbA	P25 protein [Source:GeneDB_Spombe;Acc:SPAC3C7.14c]	Flavoprotein wrbA	Flavoprotein wrbA	Tryptophan repressor binding protein	Flavoprotein wrbA	Tryptophan repressor binding protein	DEHA2F16984p;similar to uniprot|P25349 Saccharomyces cerevisiae YCR004C YCP4;	Flavoprotein wrbA	Trp repressor binding protein WrbA, putative	Flavoprotein wrbA	Flavoprotein wrbA	similar to GP:15074568, and SP:P30849; identified by sequence similarity; putative trp repressor binding protein	PMID: 1991710 best DB hits: BLAST: swissprot:O67866; FLAV_AQUAE FLAVODOXIN ----- pir: F70479; E=3e-48 swissprot:P18855; FLAV_CLOAB FLAVODOXIN ----- pir: A38177; E=2e-13 pir:G82110; Trp repressor-binding protein VC2166 [imported] - Vibrio; E=6e-13 COG: aq_2096; COG0655 Multimeric flavodoxin WrbA; E=3e-49 AF1520; COG0426 Uncharacterized flavoproteins; E=0.006 PFAM: PF00258; Flavodoxin; E=1.4e-08 flavodoxin	Flavoprotein wrbA	CDS_ID OB3102 trp repressor binding protein	Flavoprotein wrbA	BH1010 protein	Residues 1 to 198 of 198 are 100 pct identical to residues 1 to 198 of a 198 aa protein from Escherichia coli K12 ref: NP_415524.1 trp repressor binding protein; affects association of trp repressor and operator	Flavoprotein wrbA	Flavoprotein wrbA	Putative uncharacterized protein	Flavoprotein	Trp repressor binding protein, putative	multimeric flavodoxin WrbA	IPR008254: Flavodoxin/nitric oxide synthase trp-repressor binding protein	similar to Salmonella typhi Ty2 trp repressor binding protein trp repressor binding protein	similar to BR1049, trp repressor binding protein WrbA, trp repressor binding protein	
ECOLI00965	Uncharacterized protein ymdF	Putative cytoplasmic protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ymdF	Putative uncharacterized protein ymdF	Putative uncharacterized protein ymdF	Predicted protein	Putative uncharacterized protein ymdF	YmdF protein	Conserved protein	conserved predicted protein	Putative uncharacterized protein ymdF	
ECOLI04273	Uncharacterized protein yuaO	pseudo	Putative uncharacterized protein	Putative RTX family exoprotein A gene	Autotransporter	Autotransporter	Putative adhesin	ORF28 unknown	HMW2A, high molecular weight adhesin 2	Putative surface-exposed virulence protein bigA	Outer membrane autotransporter barrel	Hemolysin-type calcium-binding protein	Code: UW; COG: COG5295 putative adhesin	Hemolysin-type calcium-binding region PFAM: Hemolysin-type calcium-binding region: (0.15) KEGG: tdn:Tmden_0243 hemolysin-type calcium-binding region, ev=3e-78, 36% identity	hypothetical protein	Putative adhesin	Adhesin aidA-I	Hemolysin-type calcium-binding region	transcript_id=ENSTBET00000001767	Adhesin	YadA C-terminal domain protein PFAM: YadA C-terminal domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein	PE-PGRS family protein	Hypothetical protein	Putative haemagglutinin-like (Or adhesin-like) with a signal peptide and a putative subtilisin-like serine protease domain	Adhesin	Membrane-anchored cell surface protein	hypothetical protein KEGG: ava:Ava_4160 VCBS	Outer membrane autotransporter barrel domain protein precursor	Putative uncharacterized protein	
ECOLI00966	Putative pyrimidine permease rutG	Uracil permease	Uracil permease	Putative uracil permease	Probable purine or uracil permease	Probable uracil permease	Uracil permease	Uracil permease	Uracil permease	Uracil transport protein	Xanthine/uracil permeases	Putative permease	putative uracil permease	Putative purine permease ycdG	similar to GP:15160336; identified by sequence similarity; putative uracil-xanthine permease	Uracil permease	Putative xanthine/uracil family permease	Putative xanthine/uracil family permease	Uracil permease	Uracil permease	Uracil transporter	Putative xanthine/uracil family permease	Xanthine/uracil permease family protein	Putative uracyl permease	Bme16	Putative transport membrane protein	Putative transport protein	similar to AX067037-1|CAC26746.1| percent identity: 86 in 429 aa putative uracil permease	Xanthine/uracil permease	
ECOLI00967	Putative flavin reductase rutF	Putative 4-hydroxyphenylacetate 3-hydroxylase, small subunit	Flavoprotein oxidoreductase	Putative flavin:NADH reductase ycdH	Putative 4-hydroxyphenylacetate 3-monooxygenase, reductase component	NAD(P)H-flavin oxidoreductase	Putative uncharacterized protein	Putative flavin reductase rutF	4-hydroxyphenylacetate 3-monooxygenase	Residues 1 to 184 of 184 are 98 pct identical to residues 8 to 191 of a 191 aa protein from Escherichia coli dbj: BAA35774.1 4-hydroxyphenylacetate 3-monooxygenase small chain	POSSIBLE OXIDOREDUCTASE	Mb3032c, -, len: 204 aa. Equivalent to Rv3007c, len: 204 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 204 aa overlap). Possible oxidoreductase (EC 1.-.-.-), similar to Q9EWU5|3SC5B7.04c PUTATIVE OXIDOREDUCTASE from Streptomyces coelicolor (162 aa), FASTA scores: opt: 376, E(): 1.5e-18, (41.35% identity in 150 aa overlap); Q9K416|SCG22.29c PUTATIVE FLAVIN-DEPENDENT REDUCTASE PROTEIN from Streptomyces coelicolor (169 aa), FASTA scores: opt: 246, E(): 1e-09, (34.1% identity in 135 aa overlap); and some similarity to coupling proteins of 4-hydroxyphenylacetic hydroxylase/monooxygenase e.g. Q9HWT6|HPAC|PA4092 Pseudomonas aeruginosa (170 aa), FASTA score: opt: 214; O68232|HPAC Photorhabdus luminescens (Xenorhabdus luminescens) (172 aa), FASTA score: opt: 198; Q9RPU2|HPAC Salmonella dublin (170 aa), FASTA score: opt: 197; etc.  Equivalent to AAK47416 from Mycobacterium tuberculosis strain CDC1551 (236 aa) but shorter 32 aa. Start chosen by similarity. POSSIBLE OXIDOREDUCTASE	Putative NADH:FMN oxidoreductase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative flavin:NADH reductase (oxydoreductase)	identified by similarity to SP:Q57501; match to protein family HMM PF01613 4-hydroxyphenylacetate 3-monooxygenase, reductase component	Flavin reductase-like, FMN-binding	Flavin reductase-like, FMN-binding	Flavin reductase-like	Best Blastp Hit: pir||B81981 probable 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3) small chain NMA0614 [similarity] - Neisseria meningitidis (group A strain Z2491) >gi|7379349|emb|CAB83904.1| (AL162753) putative NADH:FMN oxidoreductase [Neisseria meningitidis] COG1853 Conserved protein/domain typically putative flavoprotein oxidoreductase	Code: R; COG: COG1853 conserved hypothetical protein	Flavin reductase domain protein, FMN-binding	flavin reductase-like, FMN-binding	4-hydroxyphenylacetate 3-monooxygenase,reductase component	Flavin reductase-like, FMN-binding	Code: R; COG: COG1853; orf conserved hypothetical protein	Flavin reductase-like, FMN-binding	Putative flavin:NADH reductase YcdH	Flavin reductase-like, FMN-binding	FMN reductase	
ECOLI00968	Putative NADH dehydrogenase/NAD(P)H nitroreductase rutE	Putative NADH dehydrogenase/NAD(P)H nitroreductase CC_0061	Putative NADH dehydrogenase/NAD(P)H nitroreductase Atu2496	Nitroreductase	Nitroreductase family protein	Putative NADH dehydrogenase/NAD(P)H nitroreductase ycdI	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Nitroreductase family protein	Putative NADH dehydrogenase/NAD(P)H nitroreductase rutE	similar to AX065981-1|CAC26230.1| percent identity: 79 in 198 aa conserved hypothetical protein	Nitroreductase family	Residues 1 to 196 of 196 are 98 pct identical to residues 1 to 196 of a 196 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287013.1 putative enzyme	Putative NADH dehydrogenase/NAD(P)H nitroreductase RSc1004	Probable nitroreductase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark nitroreductase	Putative NADH dehydrogenase/NAD(P)H nitroreductase XAC0554	nitroreductase	Putative oxidoreductase (NADH dehydrogenase/NAD(P)H nitroreductase)	similar to Nitroreductase	Code: C; COG: COG0778 putative enzyme	Nitroreductase	Nitroreductase COG0778	Code: C; COG: COG0778 putative enzyme	putative NADH dehydrogenase/NAD(P)H nitroreductase	nitroreductase family protein identified by match to protein family HMM PF00881	Putative NADH dehydrogenase/NAD(P)H nitroreductase rutE	Oxygen-insensitive NAD(P)H nitroreductase	
ECOLI00969	Protein rutD	Putative beta-ketoadipate enol-lactone hydrolase	Hydrolase, alpha/beta hydrolase fold family	Hydrolase	Beta-ketoadipate enol-lactone hydrolase	Hypothetical protein ycdJ	Putative hydrolase	probable hydrolase	Hydrolase, alpha/beta fold family	Protein rutD	SCE87.22c, possible hydrolase, len: 314 aa: Similar to several e.g. Mycobacterium tuberculosis TR:O53321 (EMBL: AL021646) hypothetical 32.1 KD protein (299 aa), fasta scores opt: 261 z-score: 297.3 E(): 3.5e-09 31.7% identity in 281 aa overlap and Streptomyces lividans SW:PRXC_STRLI (EMBL: U02635) non-heme chloroperoxidase (EC 1.11.1.10) (275 aa), fasta scores opt: 241 z-score: 275.2 E(): 5.9e-08 30.0% identity in 287 aa overlap. Contains a Pfam match to entry PF00561 abhydrolase, alpha/beta hydrolase fold. putative hydrolase	Residues 1 to 232 of 232 are 98 pct identical to residues 35 to 266 of a 266 aa protein from Escherichia coli K12 ref: NP_415529.1 putative acetyltransferase	identified by match to protein family HMM PF00561 hydrolase, alpha/beta fold family	Putative uncharacterized protein	Hydrolase protein	Uncharacterized protein Rv2715/MT2788	Mb2734, -, len: 341 aa. Equivalent to Rv2715, len: 341 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 341 aa overlap). Possible hydrolase (EC 3.-.-.-), showing some similarity with other hydrolases e.g. Q9I5B0|PA0829 PROBABLE HYDROLASE from Pseudomonas aeruginosa (313 aa), FASTA scores: opt: 336, E(): 9.9e-14, (28.05% identity in 289 aa overlap); BAB55888 HYDROLASE (FRAGMENT) from Terrabacter sp. DBF63 (319 aa), FASTA scores: opt: 326, E(): 4.2e-13, (27.95% identity in 290 aa overlap); O52866|CEH|EH SOLUBLE EPOXIDE HYDROLASE from Corynebacterium SP (285 aa), FASTA scores: opt: 325, E(): 4.4e-13, (29.95% identity in 284 aa overlap); etc. Also shows some similarity to P96811|EPHF|Rv0134|MTCI5.08 HYPOTHETICAL 33.8 KDA PROTEINfrom Mycobacterium tuberculosis (300 aa), FASTA scores: E(): 1.8e-10, (27.7% identity in 271 aa overlap).  Contains lipases, serine active site motif (PS00120). POSSIBLE HYDROLASE	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative hydrolase (alpha/beta hydrolase superfamily)	identified by match to protein family HMM PF00561 hydrolase, alpha/beta fold family	Alpha/beta hydrolase fold	b-ketoadipate enol-lactone hydrolase	Code: R; COG: COG0596 putative acetyltransferase	Alpha/beta hydrolase	Code: R; COG: COG0596 putative acetyltransferase	lipolytic enzyme	Putative uncharacterized protein	hydrolase, alpha/beta fold family identified by match to protein family HMM PF00561	hypothetical protein similarity to COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)(Evalue: 9E-35)	hydrolase, alpha/beta fold family identified by match to protein family HMM PF00561	
ECOLI00970	UPF0076 protein rutC	Putative uncharacterized protein	Putative uncharacterized protein	putative translation initiationinhibitor, yjgF family	UPF0076 protein rutC	Endoribonuclease, L-PSP family	Product confidence : hypothetical Gene name confidence : hypothetical CONSERVED HYPOTHETICAL PROTEIN	Endoribonuclease L-PSP family protein	Putative uncharacterized protein	Protein synthesis inhibitor	SC9C7.14c, conserved hypothetical protein, len: 132aa; similar to many hypotheticals eg. TR:P75896 (EMBL:AE000202) from Escherichia coli (128 aa) fasta scores; opt: 249, z-score: 350.3, E(): 3.2e-12, (39.2% identity in 125 aa overlap). Contains Pfam match to entry PF01042 DUF10, Domain of unknown function. conserved hypothetical protein	Residues 1 to 128 of 128 are 99 pct identical to residues 1 to 128 of a 128 aa protein from Escherichia coli K12 ref: NP_415530.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative translation initiation inhibitor	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	identified by match to protein family HMM PF01042 endoribonuclease L-PSP family protein	Endoribonuclease L-PSP	Code: J; COG: COG0251; orf conserved hypothetical protein	Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP: (7.7e-24) KEGG: sil:SPOA0400 endoribonuclease L-PSP family protein, ev=1e-48, 66% identity	Putative uncharacterized protein	Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP KEGG: syf:Synpcc7942_2408 hypothetical protein	ribonuclease, PSP-type; translation intitiation inhibition protein	Endoribonuclease L-PSP	Putative uncharacterized protein ycdK	Putative translation initiation inhibitor	Hypothetical protein precursor	Endoribonuclease L-PSP family protein	Putative endoribonuclease L-PSP	Hypothetical protein	
ECOLI00971	Putative isochorismatase family protein rutB	Putative isochorismatase	Isochorismatase	Uncharacterized isochorismatase family protein CC_2795	Putative uncharacterized protein	Putative isochorismatase	Uncharacterized isochorismatase family protein Atu2499	Hypothetical isochorismatase family protein ycdL	isochorismatase	Isochorismatase family protein	Putative isochorismatase family protein rutB	hypothetical protein	SCD65.07c, probable hydrolase, len: 224 aa; similar to SW:ENTB_ECOLI (EMBL:M24148) Escherichia coli isochorismatase (EC 3.3.2.1) EntB, 285 aa; fasta scores: opt: 245 z-score: 306.5 E(): 1.3e-09; 29.2% identity in 202 aa overlap. Contains Pfam match to entry PF00857 Isochorismatase, Isochorismatase family and a TTA leucine codon, possible target for bldA regulation putative hydrolase	Residues 1 to 244 of 244 are 97 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli K12 ref: NP_415531.1 putative synthetase	Probable hydrolase protein	Isochorismatase hydrolase protein	Probable isochorismatase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative amidohydrolase (isochorismatase)	COG1335 putative isochorismatase	Hydrolase, isochorismatase family	identified by match to protein family HMM PF00857 isochorismatase family protein	identified by match to protein family HMM PF00857 isochorismatase family protein	Isochorismatase hydrolase	Code: Q; COG: COG1335 putative synthetase	Isochorismatase hydrolase	Isochorismatase hydrolase	Hypothetical isochorismatase family protein YcdL	Isochorismatase hydrolase	isochorismatase hydrolase PFAM: isochorismatase hydrolase KEGG: ape:APE2350 isochorismatase	
ECOLI00972	Putative monooxygenase rutA	Putative monooxygenase Atu2500	Putative monooxygenase ycdM	Bacterial luciferase family protein	Putative monooxygenase rutA	Residues 12 to 393 of 393 are 98 pct identical to residues 1 to 382 of a 382 aa protein from Escherichia coli K12 ref: NP_415532.1 orf, conserved hypothetical protein	Monooxygenase protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative enzyme (monooxygenase)	identified by match to protein family HMM PF00296 bacterial luciferase family protein	luciferase	Code: C; COG: COG2141; orf conserved hypothetical protein	Putative monooxygenase YcdM	Putative monooxygenase YcdM	Putative luciferase-like monooxygenase	Alkanesulfonate monooxygenase	Bacterial luciferase family protein	conserved hypothetical protein Code: C; COG: COG2141	Monooxygenase of the alternative pyrimidine degradation pathway	Nitrilotriacetate monooxygenase component A	putative monooxygenase YcdM	Luciferase family protein	Putative enzyme	Putative monooxygenase rutA	Luciferase family protein	Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin- dependent oxidoreductase-like protein	Predicted monooxygenase	Putative monooxygenase rutA	Luciferase family protein	Putative monooxygenase rutA	
ECOLI00973	HTH-type transcriptional regulator rutR	Transcriptional regulator, TetR family	Probable transcriptional regulator	Transcriptional regulator, TetR family	Putative transcriptional regulator	HTH-type transcriptional regulator rutR	identified by match to PFAM protein family HMM PF00440 transcriptional regulator, TetR family	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Transcriptional regulator, TetR family	TRANSCRIPTIONAL REGULATOR, TETR FAMILY	HTH-type transcriptional regulator rutR	probable transcriptional regulator	Residues 1 to 212 of 212 are 100 pct identical to residues 1 to 212 of a 212 aa protein from Escherichia coli K12 ref: NP_415533.1 putative tet operon regulator	identified by match to protein family HMM PF00440 transcriptional regulator, TetR family	Transcriptional regulator protein	IPR001647: Bacterial regulatory protein TetR, HTH motif putative transcriptional repressor (TetR/AcrR family)	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	similar to BR0280, transcriptional regulator, TetR family transcriptional regulator, TetR family	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pr : putative regulator putative transcriptional repressor (TetR/AcrR family)	Putative transcriptional repressor	identified by match to protein family HMM PF00440 transcriptional regulator, TetR family	identified by match to protein family HMM PF00440 transcriptional regulator, TetR family	regulatory protein, TetR	regulatory protein, TetR	Code: K; COG: COG1309 putative tet operon regulator	Bacterial regulatory protein TetR, HTH motif	Bacterial regulatory protein TetR, HTH motif.  COG1309: Transcriptional regulator (AcrR). Transcriptional regulator, TetR family	Code: K; COG: COG1309 putative tet operon regulator	transcriptional regulator, TetR family	
ECOLI00974	Bifunctional protein putA	Proline dehydrogenase/delta-1-pyrroline-5- carboxylate dehydrogenase	Delta-1-pyrroline-5-carboxylate dehydrogenase	Bifunctional PutA protein	Proline dehydrogenase/delta-1-pyrroline-5- carboxylate dehydrogenase	Proline dehydrogenase	PutA	Proline dehydrogenase PutA	Putative proline dehydrogenase/delta-1-pyrroline- 5-carboxylate dehydrogenase	Proline dehydrogenase	Proline dehydrogenase	Proline dehydrogenase	1-pyrroline-5 carboxylate dehydrogenase	NAD-dependent aldehyde dehydrogenases	Bifunctional PutA protein	Proline dehydrogenase/delta-1-pyrroline-5- carboxylate dehydrogenase	putative proline dehydrogenase	1-pyrroline-5 carboxylate dehydrogenase	PutA protein	Proline dehydrogenase/delta-1-pyrroline-5- carboxylate dehydrogenase	Bifunctional proline oxidoreductase/transcriptional repressor	Bifunctional proline oxidoreductase/transcriptional repressor	Proline dehydrogenase/delta-1-pyrroline-5- carboxylate dehydrogenase, putative	Bifunctional PutA protein	PMID: 96062224 best DB hits: BLAST: pir:H64526; proline dehydrogenase (EC 1.5.99.8); E=0.0 pir:B71980; proline dehydrogenase (EC 1.5.99.8); E=0.0 pir:C81297; proline dehydrogenase (EC 1.5.99.8); E=1e-180 COG: jhp0048_2; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-123 Cj1503c_1; COG0506 Proline dehydrogenase; E=2e-56 sll1561_2; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-51 PFAM: PF01619; Proline dehydrogenase; E=2e-36 PF00171; Aldehyde dehydrogenase family; E=0.0014 proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase	predicted by Codon_usage predicted by Homology predicted by FrameD BIFUNCTIONAL: PROLINE DEHYDROGENASE AND DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE PROTEIN	Bifunctional putA protein	Bifunctional proline oxidoreductase/transcriptional repressor	Delta-1-pyrroline-5-carboxylate dehydrogenase	

ECOLI00975	Sodium/proline symporter	Sodium/proline symporter	Sodium/proline symporter	Proline permease	Possible sodium/proline symporter	Sodium/proline symporter	Sodium/proline symporter	PutP	Sodium/proline symporter PutP	Putative sodium/proline symporter	Sodium/proline symporter	Sodium/proline symporter	Na+/proline, Na+/panthothenate symporters and related permeases	Sodium/proline symporter	Sodium/proline symporter	Sodium/proline symporter	Proline permease	SODIUM/PROLINE SYMPORTER	Proline permease	Sodium/proline symporter	Major sodium/proline symporter	CDS_ID OB1351 sodium:proline symporter	similar to Y09163-1|CAA70363.1| percent identity: 83 in 523 aa putative sodium/proline symporter	Sodium/proline symporter	Na+/proline symporter	Proline permease	Sodium/proline symporter	identified by similarity to SP:P07117; match to protein family HMM PF00474; match to protein family HMM TIGR00813 sodium/proline permease	InterProMatches:IPR001734; Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) proline transporter	

ECOLI00977	UPF0409 protein ycdO	UPF0409 lipoprotein NMB0035	UPF0409 protein ycdO precursor	Conserved domain protein	UPF0409 protein ycdO	Lipoprotein	SCC75A.21, possible lipoprotein, len: 384 aa.  Similar to several proteins of undefined function including: Escherichia coli TR:BAA35799(EMBL:D90739) (362 aa), fasta scores opt: 783 z-score: 851.0 E():0 39.2% identity in 365 aa overlap and Bacillus subtilis SW:YWBM_BACSU(EMBL:X73124) (385 aa), fasta scores opt: 675 z-score: 734.3 E():0 34.9% identity in 387 aa overlap.  Contains a N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site. putative lipoprotein.	Residues 1 to 375 of 375 are 100 pct identical to residues 1 to 375 of a 375 aa protein from Escherichia coli K12 ref: NP_415537.1 orf, conserved hypothetical protein	UPF0409 protein ycdO	UPF0409 lipoprotein	conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	UPF0409 protein ycdO	Putative lipoprotein	Ortholog of S. aureus MRSA252 (BX571856) SAR0340 putative lipoprotein	conserved hypothetical protein	conserved hypothetical protein	similar to unknown protein	identified by match to protein family HMM PF04302 Predicted periplasmic lipoprotein involved in iron transport	identified by similarity to GB:AAO57073.1; match to protein family HMM PF04302 conserved hypothetical protein	Protein of unknown function DUF451	Similar to the C-terminal regions of Streptomyces coelicolor putative lipoprotein SCC75A.21 TR:Q9RKQ3 (EMBL:AL133220) (384 aa) fasta scores: E(): 2.1e-32, 44.361% id in 266 aa, and Bacillus subtilis hypothetical protein YwbM SW:YWBM_BACSU (P39596) (385 aa) fasta scores: E(): 1.9e-28, 42.353% id in 255 aa putative lipoprotein	Best Blastp Hit: pir||E81244 conserved hypothetical protein NMB0035 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7225255|gb|AAF40506.1| (AE002362) conserved hypothetical protein [Neisseria meningitidis MC58] conserved hypothetical protein	Code: P; COG: COG2822 conserved hypothetical protein	identified by match to protein family HMM PF04302 lipoprotein, putative	Code: P; COG: COG2822 conserved hypothetical protein	putative lipoprotein identified by match to protein family HMM PF04302	probable lipoprotein	
ECOLI00978	Peroxidase ycdB	Putative uncharacterized protein	Lmo0367 protein	Peroxidase ycdB precursor	Dyp-type peroxidase family protein	Peroxidase ycdB	SCC75A.22, possible membrane protein, len: 420 aa.  Similar to several proteins of undefined function including: Bacillus subtilis SW:YWBN_BACSU(EMBL:X73124) (416 aa), fasta scores opt: 1076 z-score: 1183.4 E(): 0 42.7% identity in 405 aa overlap and Streptomyces coelicolor TR:Q9ZBW9(EMBL:AL034355) SCD78.30c (445 aa), fasta scores opt:584 z-score: 643.8 E(): 1.7e-28 43.2% identity in 428 aa overlap. Contains a possible N-terminal membrane spanning hydrophobic domain. putative membrane protein.	Lin0386 protein	Residues 1 to 421 of 421 are 97 pct identical to residues 1 to 423 of a 423 aa protein from Escherichia coli K12 ref: NP_415538.1 orf, conserved hypothetical protein	Peroxidase ycdB	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	Peroxidase ycdB	Possible periplasmic protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0341 putative Sec-independent exported protein	conserved hypothetical protein	conserved hypothetical protein	putative iron-dependent peroxidase	similar to unknown protein	identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01412; match to protein family HMM TIGR01413 dyp-type peroxidase family protein	identified by match to protein family HMM PF04261; match to protein family HMM TIGR01412; match to protein family HMM TIGR01413 Dyp-type peroxidase family	Twin-arginine translocation pathway signal:Tat-translocated enzyme:Dyp-type peroxidase	Similar to Bacillus subtilis hypothetical protein SW:YWBN_BACSU (P39597) (416 aa) fasta scores: E(): 1.6e-40, 40.338% id in 414 aa, and to Streptomyces coelicolor putative membrane protein SCC75A.22 TR:Q9RKQ2 (EMBL:AL133220) (420 aa) fasta scores: E(): 4.4e-40, 40.793% id in 429 aa putative Sec-independent exported protein	Best Blastp Hit: pir||F81244 conserved hypothetical protein NMB0036 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7225256|gb|AAF40507.1| (AE002362) conserved hypothetical protein [Neisseria meningitidis MC58] conserved hypothetical protein	Code: P; COG: COG2837 conserved hypothetical protein	identified by similarity to EGAD:20441; match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01412; match to protein family HMM TIGR01413 Dyp-type peroxidase family protein	Code: P; COG: COG2837 conserved hypothetical protein	
ECOLI00979	Protein phoH	PhoH protein	Phosphate starvation-inducible protein	Protein phoH	Residues 2 to 307 of 307 are 98 pct identical to residues 49 to 354 of a 354 aa protein from Escherichia coli O157:H7 ref: NP_309293.1 ATP-binding pho regulon component PhoH	Putative phosphate starvation-inducible protein	Phosphate starvation-inducible protein	IPR003714: PhoH-like protein PhoB-dependent, ATP-binding pho regulon component	similar to Salmonella typhi CT18 PhoH protein (phosphate starvation-inducible protein PsiH) PhoH protein (phosphate starvation-inducible protein PsiH)	Putative phosphate starvation-inducible protein	PhoB-dependent ATP-binding pho regulon component	may be helicase; induced by P starvation; Code: T; COG: COG1702 PhoB-dependent, ATP-binding pho regulon component	may be helicase; induced by P starvation; Code: T; COG: COG1702 PhoB-dependent, ATP-binding pho regulon component	PhoH protein	PhoH family protein	Putative phosphate starvation-inducible protein	PhoH protein	Putative phosphate starvation-inducible protein	Phosphate starvation-inducible protein	conserved protein with nucleoside triphosphate hydrolase domain	PhoH family protein	PhoB-dependent, ATP-binding pho regulon component	Putative uncharacterized protein	PhoH family protein	Conserved protein with nucleoside triphosphate hydrolase domain	Putative phoH protein	Protein phoH	PhoH family protein	Protein phoH	
ECOLI00980	Biofilm PGA synthesis protein pgaD	Biofilm PGA synthesis protein pgaD	Putative uncharacterized protein	Putative uncharacterized protein ycdP	Haemin storage system, HmsS protein	conserved hypothetical protein	predicted inner membrane protein	Biofilm PGA synthesis protein PgaD	Predicted inner membrane protein	Biofilm PGA synthesis protein PgaD	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Biofilm PGA synthesis protein PgaD	Putative uncharacterized protein	Biofilm PGA synthesis protein pgaD	Putative uncharacterized protein	Putative inner membrane protein associated with biofilm formation	Putative inner membrane protein associated with biofilm formation	Putative inner membrane protein associated with biofilm formation	YcdP protein	Predicted inner membrane protein	Predicted inner membrane protein	predicted inner membrane protein	Predicted inner membrane protein	
ECOLI00981	Biofilm PGA synthesis N-glycosyltransferase pgaC	Glycosyl transferase, group 2 family protein	Putative glycosyltransferase	Glucosyltransferase	Glycosyltransferase	Glycosyl transferase, family 2	Conserved hypothetical membrane protein	Putative glycosyltransferase	Putative glycosyl transferase	Hypothetical protein ycdQ	Putative glycosyl transferase	Putative glycosyl transferase component of hemin storage system	Putative hemin storage protein	Putative glycosyl transferase component of hemin storage system	probable glycosyltransferase	Putative glycosyl transferase	Biofilm PGA synthesis N-glycosyltransferase pgaC	Glucosaminyltransferase	Haemin storage system, HmsR protein	glycosyltransferase, family 2	Biofilm PIA synthesis N-glycosyltransferase icaA	Putative hemin storage transmembrane protein	identified by match to protein family HMM PF00535 intercellular adhesion protein A	probable glycosyltransferase	Haemin storage system, HmsR protein	Glycosyltransferase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark HmsR	Glycosyl transferase	HmsR protein	
ECOLI00982	Biofilm PGA synthesis lipoprotein pgaB	Hypothetical lipoprotein ycdR	Putative hemin storage protein	Putative hemin storage protein	Putative hemin storage lipoprotein	Putative hemin storage protein	Biofilm PGA synthesis lipoprotein pgaB	Haemin storage system, HmsF protein	Putative hemin storage signal peptide protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark HmsF	HmsF protein	Haemin storage system, HmsF protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pm : putative membrane component putative lipoprotein (Haemin storage system) (HmsF)	Predicted xylanase/chitin deacetylase CDA1 protein	identified by similarity to GB:AAB66589.2; match to protein family HMM PF01522 polysaccharide deacetylase domain lipoprotein	Putative uncharacterized protein	Polysaccharide deacetylase	Polysaccharide deacetylase	Polysaccharide deacetylase	predicted xylanase/chitin deacetylase COG0726	Polysaccharide deacetylase precursor	Hypothetical lipoprotein YcdR	Haemin storage system, HmsF protein precursor	HmsF protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Hypothetical lipoprotein YcdR	polysaccharide deacetylase TIGRFAM: Twin-arginine translocation pathway signal PFAM: polysaccharide deacetylase KEGG: bur:Bcep18194_B1941 polysaccharide deacetylase	polysaccharide deacetylase PFAM: polysaccharide deacetylase KEGG: bcn:Bcen_4263 polysaccharide deacetylase	Haemin storage system, HmsF protein precursor	
ECOLI00983	Biofilm PGA synthesis protein pgaA	hypothetical protein	Hypothetical protein ycdS	Putative hemin storage protein	Putative hemin storage protein	Putative hemin storage protein	Putative hemin storage protein	Biofilm PGA synthesis protein pgaA	Haemin storage system, HmsH protein	Putative hemin-binding outer membrane transmembrane protein	Hemin-binding outer membrane transmembrane protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark HmsH	HmsH protein	Haemin storage system, HmsH protein	Hypothetical protein	identified by match to protein family HMM PF00515; match to protein family HMM PF07719 heamin storage system, HmsH protein	Putative uncharacterized protein	Haemin storage system, HmsH protein	hypothetical protein	FOG: TPR repeat COG0457	Putative uncharacterized protein	Putative uncharacterized protein	Haemin storage system, HmsH protein precursor	HmsH protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Putative uncharacterized protein ycdS	conserved hypothetical protein KEGG: bur:Bcep18194_B1940 hypothetical protein	Haemin storage system, HmsH protein precursor	Hypothetical protein	Hypothetical protein	
ECOLI00984	Inner membrane protein ycdT	Lmo1912 protein	Putative uncharacterized protein	Hypothetical protein ycdT	Putative uncharacterized protein ycdT	Response regulator containing a CheY-like receiver domain and a GGDEF domain COG3706	Putative uncharacterized protein	Putative uncharacterized protein ycdT	predicted diguanylate cyclase	possible GGDEF domain protein	Diguanylate cyclase (GGDEF) domain protein	Diguanylate cyclase	pseudo	Diguanylate cyclase (GGDEF) domain protein	Diguanylate cyclase	Two-component response regulator	Putative GGDEF family protein; putative membrane protein	Putative sensory box/ggdef family protein	Diguanylate cyclase (Ggdef) domain protein	Diguanylate cyclase (GGDEF) domain protein	Putative uncharacterized protein	Putative diguanylate cyclase	pseudo	GGDEF family protein	Putative diguanylate cyclase	GGDEF domain protein	YcdT protein	Predicted diguanylate cyclase	GGDEF domain protein	


ECOLI00985	Putative uncharacterized protein ymdE	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo predicted (acyl-carrier-protein) S-malonyltransferase, N-terminal part	
ECOLI00986	Uncharacterized protein ycdU	Residues 1 to 328 of 328 are 98 pct identical to residues 1 to 328 of a 328 aa protein from Escherichia coli K12 ref: NP_415548.1 orf, conserved hypothetical protein	conserved hypothetical protein	Putative membrane protein	Predicted inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein ycdU	Predicted inner membrane protein	Predicted inner membrane protein	predicted inner membrane protein	
ECOLI00987	Glyoxylate/hydroxypyruvate reductase A	Putative 2-hydroxyacid dehydrogenase ycdW	Putative 2-hydroxyacid dehydrogenase	Putative 2-hydroxyacid dehydrogenase	Putative 2-hydroxyacid dehydrogenase	D-isomer specific 2-hydroxyacid dehydrogenase family protein	Glyoxylate/hydroxypyruvate reductase A	similar to Escherichia coli K12 putative dehydrogenase gi: 1787270 (326 aa). BLAST with identity of 99% in 326 aa. This CDS contains an in-frame stop codon.  The sequence has been checked and is believed to be correct. pseudo	Probable d-isomer specific 2-hydroxyacid dehydrogenase, nad-binding; oxidoreductase protein	Glyoxylate/hydroxypyruvate reductase A	identified by match to protein family HMM PF02826 D-isomer specific 2-hydroxyacid dehydrogenase family protein	Probable phosphoglycerate dehydrogenase	D-2-hydroxyacid dehydrogenase protein	paral putative oxidoreductase	similar to Salmonella typhi CT18 putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region	similar to BR0005, D-isomer specific 2-hydroxyacid dehydrogenase family protein D-isomer specific 2-hydroxyacid dehydrogenase family protein	Glyoxylate/hydroxypyruvate reductase A	6-phosphogluconate dehydrogenase, NAD-binding:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	Code: HE; COG: COG0111 putative dehydrogenase	Pyridine nucleotide-disulphide oxidoreductase, class I:D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative dehydrogenase	Code: HE; COG: COG0111 putative dehydrogenase	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	putative 2-hydroxyacid dehydrogenase start codon not provided	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	Phosphoglycerate dehydrogenase and related dehydrogenase COG0111	Code: HE; COG: COG0111 putative dehydrogenase	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	
ECOLI00988	Putative hydrolase ycdX	Putative hydrolase ycdX	conserved hypothetical protein	Putative hydrolase ycdX	Putative hydrolase VC_A0894	Putative hydrolase SO_1652	Putative hydrolase ECA2529	Putative hydrolase ycdX	Putative hydrolase CA_C0509	Putative hydrolase TTE1963	Putative hydrolase VV2_1469	Residues 1 to 245 of 245 are 99 pct identical to residues 1 to 245 of a 245 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287168.1 orf, conserved hypothetical protein	Putative hydrolase YPO2037/y2275/YP_1880	putative Histidinol phosphatase and related hydrolases of the PHP family	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative hydrolase YPTB2019	Putative hydrolase ycdX	Code: ER; COG: COG1387 conserved hypothetical protein	Putative hydrolase Pcar_2586	Code: ER; COG: COG1387 conserved hypothetical protein	Code: ER; COG: COG1387; orf conserved hypothetical protein	Putative hydrolase ycdX	PHP C-terminal domain protein	Hypothetical protein	PHP C-terminal domain protein	PHP-like	Putative hydrolase ycdX	PHP family protein identified by match to protein family HMM PF02231; match to protein family HMM PF02811	PHP family protein identified by match to protein family HMM PF02811	
ECOLI00989	Uncharacterized protein ycdY	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein ycdY	Putative uncharacterized protein	Putative oxidoreductase component	Residues 1 to 184 of 184 are 99 pct identical to residues 1 to 184 of a 184 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287169.1 putative oxidoreductase component	Putative uncharacterized protein	Similar to putative oxidoreductase component YcdY of Escherichia coli	paral putative oxidoreductase component	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Similar to: HI1543, YCDY_HAEIN predicted component of anaerobic dehydrogenases	Uncharacterized component of anaerobic dehydrogenases TorD protein	Putative oxidoreductase component	conserved hypothetical protein	Code: R; COG: COG3381 putative oxidoreductase component	Code: R; COG: COG3381 putative oxidoreductase component	Code: R; COG: COG3381 putative oxidoreductase component	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ycdY	Hypothetical protein	Hypothetical protein	Hypothetical protein	putative oxidoreductase component Code: R; COG: COG3381	Hypothetical protein	conserved hypothetical protein	Predicted component of anaerobic dehydrogenase	
ECOLI00990	Inner membrane protein ycdZ	Putative uncharacterized protein VVA0739	Putative membrane protein	putative membrane protein	Hypothetical protein ycdZ	Putative uncharacterized protein VCA0543	Putative uncharacterized protein	Glutathione-regulated potassium-efflux system protein	Putative membrane protein YcdZ	Putative uncharacterized protein ycdZ	Chloride channel protein EriC	Residues 1 to 179 of 179 are 98 pct identical to residues 1 to 179 of a 179 aa protein from Escherichia coli K12 ref: NP_415554.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	conserved hypothetical protein	Inner membrane protein ycdZ	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YcdZ	Hypothetical protein precursor	Hypothetical protein precursor	conserved hypothetical protein identified by match to protein family HMM PF06496	conserved hypothetical protein identified by match to protein family HMM PF06496	Hypothetical protein precursor	Putative uncharacterized protein ycdZ	chloride channel protein EriC identified by match to protein family HMM PF06496	protein of unknown function DUF1097 PFAM: protein of unknown function DUF1097 KEGG: son:SO3047 hypothetical protein	Putative exported protein precursor	
ECOLI00991	Curli production assembly/transport component csgG	Curli production assembly/transport component csgG precursor	Curli production assembly/transport component CsgG, putative	Curli production assembly/transport component csgG	putative transcriptional regulator in curly assembly/transport, 2nd curli operon	similar to Salmonella typhi CT18 assembly/transport component in curli production assembly/transport component in curli production	curli production assembly/transport component CsgG precursor	Curli fiber membrane-associated lipoprotein CsgG	uncharacterized protein involved in formation of curli polymers CsgG	Curli production assembly/transport component csgG	Code: M; COG: COG1462 curli production assembly/transport component, 2nd curli operon	Evidence 2b : Function of strongly homologous gene; PubMedId : 9457880; Product type t : transporter putative assembly or transport protein for curli synthesis	Curli production assembly/transport component CsgG	Curli production assembly/transport component CsgG	Curli production assembly/transport component CsgG	2nd curli operon; Code: M; COG: COG1462 curli production assembly/transport component	Curli production assembly/transport component CsgG	Curli production assembly/transport component CsgG precursor	Curli production assembly/transport component CsgG precursor	putative curli production assembly/transport component csgg precursor	Curli production assembly/transport component CsgG precursor	Curli production assembly/transport component CsgG	Curli production assembly/transport component CsgG PFAM: Curli production assembly/transport component CsgG KEGG: sfr:Sfri_1520 curli production assembly/transport component CsgG	Curli production assembly/transport component CsgG PFAM: Curli production assembly/transport component CsgG KEGG: son:SO3685 curli production assembly/transport component CsgG, putative	Curli fiber membrane-associated lipoprotein CsgG	Curli production assembly/transport component csgG precursor Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9457880; Product type m : membrane component	Curli production assembly/transport component CsgG PFAM: Curli production assembly/transport component CsgG KEGG: shm:Shewmr7_3152 curli production assembly/transport component CsgG	Curli production assembly/transport component CsgG precursor	assembly /transport component in curli production	
ECOLI00992	Curli production assembly/transport component csgF	Curli production assembly/transport component csgF precursor	Curli production assembly/transport component CsgF, putative	Curli production assembly/transport component csgF	curli production assembly/transport component, 2nd curli operon	curli production assembly/transport component CsgF precursor	Curli fiber protein CsgF, putative	Curli production assembly/transport component, CsgF	Curli production assembly/transport component csgF	curli production assembly/transport component, 2nd curli operon	curli fiber protein CsgF, putative	hypothetical protein	2nd curli operon curli production assembly/transport component	Curli production assembly/transport component CsgF	Curli production assembly/transport component CsgF, putative precursor	Curli production assembly/transport component CsgF precursor	Curli production assembly/transport component CsgF	curli production assembly/transport component CsgF precursor KEGG: sfr:Sfri_1519 curli production assembly/transport component CsgF precursor	curli production assembly/transport component CsgF, putative KEGG: son:SO3686 curli production assembly/transport component CsgF, putative	Curli fiber protein CsgF, putative	putative Curli production assembly/transport component CsgF precursor Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type m : membrane component	curli production assembly/transport component csgF precursor	curli production assembly/transport component CsgF, putative KEGG: she:Shewmr4_0869 curli production assembly/transport component CsgF, putative	Curli production assembly/transport component CsgF, putative precursor	assembly /transport component in curli production	curli production assembly/transport component CsgF, putative KEGG: son:SO3686 curli production assembly/transport component CsgF, putative	Curli production assembly/transport component CsgF, putative precursor	Curli production assembly/transport component CsgF, putative precursor	Curli production assembly/transport component CsgF, putative precursor	
ECOLI00993	Curli production assembly/transport component csgE	Curli production assembly/transport component csgE precursor	Curli production assembly/transport component csgE	Residues 1 to 129 of 129 are 98 pct identical to residues 1 to 129 of a 129 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287173.1 curli production assembly-transport component, 2nd curli operon	curli production assembly/transport component, 2nd curli operon	similar to Salmonella typhi CT18 assembly/transport component in curli production assembly/transport component in curli production	Curli fiber protein CsgE, putative	Curli production assembly/transport component csgE	curli production assembly/transport component, 2nd curli operon	curli fiber protein CsgE, putative	2nd curli operon curli production assembly/transport component	Curli production assembly/transport component CsgE	Curli production assembly/transport component csgE	Curli fiber protein CsgE, putative	putative curli fiber operon CsgE Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	Curli production assembly/transport component csgE precursor	assembly /transport component in curli production	Putative uncharacterized protein precursor	Curli production assembly/transport component precursor	Curli production assembly/transport subunit CsgE	curli fiber operon CsgE KEGG: pen:PSEEN2839 curli fiber operon CsgE	Curli fiber operon CsgE precursor	Predicted transport protein	Curli production assembly/transport subunit CsgE	Curli production assembly/transport component, 2nd curli operon precursor	Curli production assembly/transport subunit CsgE	Putative uncharacterized protein	Putative uncharacterized protein	Assembly/transport component in curli production	
ECOLI00994	Probable csgAB operon transcriptional regulatory protein	Putative regulatory protein	Probable csgAB operon transcriptional Regulatory protein	Transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Putative 2-component transcriptional regulator for 2nd curli operon	Residues 11 to 226 of 226 are 100 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287174.1 putative 2-component transcriptional regulator for 2nd curli operon	IPR000792: Bacterial regulatory protein, LuxR family putative transcriptional regulator (LuxR/UhpA family)	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	regulatory protein CsgD	Probable csgAB operon transcriptional regulatory protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type r : regulator putative transcriptional regulator	Code: K; COG: COG2771 putative 2-component transcriptional regulator for 2nd curli operon	transcriptional regulator, LuxR family	Probable csgAB operon transcriptional regulatory protein	Regulatory protein, LuxR	Transcriptional regulator, LuxR family	DNA-binding response regulator, LuxR family	response regulator receiver domain protein (CheY-like)	Transcriptional regulator, LuxR family protein	Putative 2-component transcriptional regulator for 2nd curli operon	probable csgAB operon transcriptional regulatory protein identified by match to protein family HMM PF00196	Transcriptional regulator, LuxR family	transcriptional regulator, LuxR family PFAM: regulatory protein, LuxR KEGG: son:SO2725 transcriptional regulator, LuxR family	DNA-binding response regulator, LuxR family	Probable csgAB operon transcriptional Regulatory protein Code: K; COG: COG2771	response regulator receiver protein PFAM: regulatory protein, LuxR KEGG: shm:Shewmr7_2386 transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	

ECOLI00995	Minor curlin subunit	Minor curlin subunit	Minor curlin subunit	Residues 10 to 160 of 160 are 99 pct identical to residues 1 to 151 of a 151 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287175.1 minor curlin subunit precursor, similar ro CsgA	minor curlin subunit precursor, nucleator for assembly of adhesive surface organelles	similar to Salmonella typhi CT18 nucleation component of curlin monomers nucleation component of curlin monomers	minor curlin subunit CsgB	Curli fiber surface-exposed nucleator CsgB, putative	Minor curlin subunit	minor curlin subunit precursor, similar ro CsgA	Minor curlin subunit CsgB protein	Curlin associated repeat protein precursor	Minor curlin subunit CsgB	Curli fiber surface-exposed nucleator CsgB, putative	minor curlin subunit precursor	minor curlin subunit precursor CsgB	Curlin associated repeat protein precursor	Curlin associated repeat protein precursor	Putative uncharacterized protein	Minor curlin protein CsgB	Curlin associated repeat protein PFAM: Curlin associated repeat protein KEGG: pen:PSEEN2823 curli fiber surface-exposed nucleator CsgB	Curlin nucleator protein, minor subunit in curli complex	Minor curlin protein CsgB	Curlin associated repeat protein precursor	Minor curlin protein CsgB	Putative uncharacterized protein	Putative uncharacterized protein	Nucleation component of curlin monomers	Minor curlin protein CsgB	
ECOLI00996	Major curlin subunit	Major curlin subunit	Major curlin subunit	curlin major subunit, coiled surface structures; cryptic	similar to Salmonella typhi CT18 major curlin subunit precursor major curlin subunit precursor	Major curlin subunit	coiled surface structures; cryptic curlin major subunit	curlin major subunit, coiled surface structures; cryptic CsgA	Curli major subunit CsgA	Curlin major subunit CsgA	curlin major subunit CsgA	Curlin associated repeat protein precursor	Putative uncharacterized protein	Major curlin protein CsgA	Cryptic curlin major subunit	Major curlin protein CsgA	CsgA precursor	Major curlin protein CsgA	Putative uncharacterized protein	Putative uncharacterized protein	Major curlin subunit	Major curlin subunit	Major curlin subunit	Major curlin subunit	Major curlin subunit	Major curlin subunit	Major curlin protein CsgA	Major curlin subunit	Major curlin subunit	
ECOLI00997	Putative curli production protein csgC	Putative curli production protein csgC	Putative curli production protein	Residues 33 to 142 of 142 are 97 pct identical to residues 1 to 110 of a 110 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287177.1 putative curli production protein	putative curli production protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Curli assembly protein csgC	putative curli production protein	Putative curli production protein CsgC	Putative curli production protein CsgC	putative curli production protein CsgC	Putative curli production protein	Putative uncharacterized protein	Curli production protein CsgC	Predicted curli production protein	Curli production protein CsgC	Putative curli production protein precursor	Curli production protein CsgC	Putative uncharacterized protein	Putative uncharacterized protein	Curli production protein CsgC	Curli production protein CsgC	Curli production protein CsgC	Curli prooduction protein	Curli production protein CsgC	Curli production protein CsgC	Curli production protein CsgC	Curli prooduction protein	Putative curli production protein	
ECOLI00998	Uncharacterized protein ymdA	Hypothetical protein ymdA	Putative uncharacterized protein	Residues 1 to 103 of 103 are 98 pct identical to residues 1 to 103 of a 103 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287178.1 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Uncharacterized protein ymdA	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ymdA	Putative periplasmic protein	
ECOLI00999	UPF0189 protein ymdB	UPF0189 protein FN1951	UPF0189 protein MM_0177	Putative uncharacterized protein	UPF0189 protein PAE1111	UPF0189 protein SSO2899	UPF0189 protein MA_1614	UPF0189 protein XCC3184	UPF0189 protein APE1648	UPF0189 protein AF_1521	Predicted phosphatase homologous to the C- terminal domain of histone macroH2A1	UPF0189 protein PH1513	UPF0189 protein TV0719	UPF0189 protein CT2219	Putative uncharacterized protein	UPF0189 protein aq_987	UPF0189 protein Ta1105	UPF0189 protein PF1536	hypothetical histone macroH2A.1	UPF0189 protein PA3693	UPF0189 protein DR_2288	UPF0189 protein LA_4133	Hypothetical conserved protein	UPF0189 protein ymdB	Putative uncharacterized protein	UPF0189 protein lmo2759	Appr-1-p processing enzyme family protein	UPF0189 protein ymdB	unknown	
ECOLI01000	Uncharacterized protein ymdC	Cardiolipin synthase	Cardiolipin synthetase family protein	Putative uncharacterized protein	Putative uncharacterized protein	Phospholipase D family protein	Putative uncharacterized protein	Putative phospholipase D	Hypothetical protein ymdC	Putative phospholipase D protein	Putative phospholipase D protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	pseudo	Putative synthase	Phopholipase d-family protein	Residues 1 to 434 of 434 are 99 pct identical to residues 60 to 493 of a 493 aa protein from Escherichia coli K12 ref: NP_415564.1 putative synthase	IPR001736: Phospholipase D/Transphosphatidylase putative phospholipase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Cardiolipin synthase	Phopholipase D-family protein	Phopholipase D-family protein	Phospholipase D family protein	probably cardiolipin synthase Phospholipase D family protein	Putative phospholipase	cardiolipin synthase	identified by match to protein family HMM PF00614 phospholipase D family protein	Phospholipase D/Transphosphatidylase	Best Blastp Hit: emb|CAB84874.1| (AL162756) phopholipase D-family protein [Neisseria meningitidis] COG1502 Cardiolipin synthase, phoaphatidylserine putative phopholipase D-family protein	
ECOLI01001	Glucans biosynthesis protein C	Glucans biosynthesis protein mdoC	Putative uncharacterized protein	Glucans biosynthesis protein C	Glucans biosynthesis protein C	Glucans biosynthesis protein C	Putative uncharacterized protein	Residues 1 to 366 of 366 are 99 pct identical to residues 20 to 385 of a 385 aa protein from Escherichia coli O157:H7 ref: NP_309452.1 glucans biosynthesis protein	conserved hypothetical protein	membrane protein required for succinyl substitution of glucan backbone of OPG (osmoregulated periplasmic glucan)	similar to Salmonella typhi CT18 glucans biosynthesis protein glucans biosynthesis protein	pseudo	Hypothetical protein	Glucans biosynthesis protein C	identified by similarity to SP:P75920; match to protein family HMM PF01757 acyltransferase family protein	conserved hypothetical protein	conserved hypothetical protein	Acyltransferase 3	acyltransferase 3	orf conserved hypothetical protein	conserved hypothetical protein	Glucans biosynthesis protein C	Acyltransferase 3	MDO-like protein	hypothetical protein	Glucans biosynthesis protein C	Acyltransferase inner membrane protein	Acyltransferase inner membrane protein	acyltransferase 3 PFAM: acyltransferase 3 KEGG: bja:bll7034 MDO-like protein	
ECOLI01002	Glucans biosynthesis protein G	Glucans biosynthesis protein G	Glucans biosynthesis protein G	Glucans biosynthesis protein G precursor	Glucans biosynthesis protein G	Glucans biosynthesis protein G	Glucans biosynthesis protein G	Glucans biosynthesis protein G	Residues 1 to 508 of 508 are 99 pct identical to residues 4 to 511 of a 511 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287182.1 periplasmic glucans biosynthesis protein	Glucans biosynthesis protein G	identified by similarity to SP:P33136; similarity to SP:Q9FA54; match to protein family HMM PF04349 periplasmic glucan biosynthesis protein MdoG	periplasmic glucans biosynthesis protein	similar to Salmonella typhi CT18 periplasmic glucans biosynthesis protein MdoG precursor periplasmic glucans biosynthesis protein MdoG precursor	Periplasmic glucans biosynthesis protein	Periplasmic glucans biosynthesis protein MdoG	Glucans biosynthesis protein G	Glucans biosynthesis protein G	Periplasmic glucan biosynthesis protein MdoG	Periplasmic glucans biosynthesis protein G	identified by similarity to SP:P33136; match to protein family HMM PF04349 periplasmic glucans biosynthesis protein MdoG	identified by similarity to SP:P33136; match to protein family HMM PF04349 periplasmic glucan biosynthesis protein MdoG	Periplasmic glucan biosynthesis protein, MdoG	Code: P; COG: COG3131 periplasmic glucans biosynthesis protein	Evidence 2b : Function of strongly homologous gene; PubMedId : 11325942, 7934824; Product type e : enzyme periplasmic glucans biosynthesis protein	Periplasmic glucan biosynthesis protein (MdoG) COG3131: Periplasmic glucans biosynthesis protein This protein is necessary for the synthesis of periplasmic glucans. It has been suggested that it may catalyse the addition of branches to a linear glucan backbone. Citation: Cogez V, Gak E, Puskas A, Kaplan S, Bohin JP. (2002) Eur J Biochem. 2002 269(10):2473-84. periplasmic glucan biosynthesis protein	Code: P; COG: COG3131 periplasmic glucans biosynthesis protein	periplasmic glucan biosynthesis protein, MdoG	glucans biosynthesis protein	periplasmic glucan biosynthesis protein, MdoG	
ECOLI01003	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	PMID: 10952301 best DB hits: BLAST: pir:B82218; periplasmic glucans biosynthesis protein MdoH VC1287; E=1e-104 pir:G82658; periplasmic glucan biosynthesis protein XF1623; E=8e-93 pir:H83012; periplasmic glucans biosynthesis protein MdoH PA5077; E=5e-92 COG: VC1287; COG2943 Membrane glycosyltransferases; E=1e-105 aq_1407; COG1215 Glycosyltransferases, probably involved in cell; E=0.001 PFAM: PF00535; Glycosyl transferase; E=8.2e-05 periplasmic glucans biosynthesis protein MdoH	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Residues 1 to 857 of 857 are 99 pct identical to residues 1 to 857 of a 857 aa protein from Escherichia coli O157:H7 ref: NP_309454.1 membrane glycosyltransferase	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	identified by similarity to SP:P33137 glucans biosynthesis glucosyltransferase H, putative	Glucans biosynthesis glucosyltransferase H	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark periplasmic glucan biosynthesis protein	IPR000566: Lipocalin-related protein and Bos/Can/Equ allergen; IPR001173: Glycosyl transferase, family 2 membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO)/synthesis of OPGs (osmoregulated periplasmic glucans)	similar to Salmonella typhi CT18 periplasmic glucans biosynthesis protein MdoH periplasmic glucans biosynthesis protein MdoH	Glucans biosynthesis glucosyltransferase H	Membrane glycosyltransferase	Glycosyl transferase, group 2 family protein	Glucans biosynthesis glucosyltransferase H	Glucans biosynthesis glucosyltransferase H	periplasmic glucan biosynthesis protein	
ECOLI01004	Uncharacterized protein yceK	Hypothetical protein yceK	Uncharacterized protein yceK	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative uncharacterized protein	Putative outer membrane lipoprotein	Code: R; COG: COG5645 conserved hypothetical protein	Code: R; COG: COG5645 conserved hypothetical protein	Code: R; COG: COG5645; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yceK	Putative uncharacterized protein precursor	Putative uncharacterized protein yceK	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein precursor	Predicted lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	
ECOLI01005	Acidic protein msyB	Acidic protein msyB	Acidic protein suppresses mutants lacking function of protein export	acidic protein suppresses mutants lacking function of protein export	similar to Salmonella typhi CT18 acidic protein MsyB; multicopy suppressor of SecY acidic protein MsyB; multicopy suppressor of SecY	Acidic protein suppresses mutants lacking function of protein export	acidic protein suppresses mutants lacking function of protein export	acidic protein suppresses mutants lacking function of protein export MysB	suppresses mutants lacking function of protein export acidic protein	Acidic protein MsyB	Acidic protein MsyB	MsyB Acidic protein msyB	Acidic protein MsyB	Putative uncharacterized protein msyB	Putative uncharacterized protein	Acidic protein MsyB	Acidic protein MsyB; multicopy suppressor of SecY	Predicted protein	Acidic protein MsyB	Acidic protein	Acidic protein MsyB	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Acidic protein MsyB	Acidic protein MsyB	Acidic protein MsyB; multicopy suppressor of SecY	Acidic protein MsyB	Acidic protein MsyB	
ECOLI01006	Multidrug resistance protein mdtG	Putative MFS transporter	Putative efflux pump	Putative uncharacterized protein	Multidrug resistance protein mdtG	MFS transporter	Multidrug resistance protein B	Multidrug resistance protein B	Multidrug resistance protein mdtG	Multi-drug resistance efflux pump pmrA	identified by match to protein family HMM PF00083 major facilitator family transporter	Multidrug efflux protein	Putative multi-drug resistance efflux pump	Putative permease; possible multi-drug resistance efflux pump	Putative transport protein	Multidrug resistance protein mdtG	Permease MDR-related	BH2592 protein	Putative uncharacterized protein	Multidrug resistance protein B	multi-drug resistance efflux pump	multidrug resistance efflux pump	IPR001958: Tetracycline resistance protein; IPR007114: Major facilitator superfamily putative MFS family transport protein	similar to Salmonella typhi CT18 putative membrane transport protein putative membrane transport protein	hypothetical protein, similar to multi-drug resistance efflux pump	Ortholog of S. aureus MRSA252 (BX571856) SAR0122 putative transport protein	hypothetical protein, similar to multi-drug resistance efflux pump	Putative multi-drug resistance efflux pump	best blastp match gb|AAK33501.1| (AE006508) putative multi-drug resistance efflux pump [Streptococcus pyogenes M1 GAS] putative multi-drug resistance efflux pump	
ECOLI01007	Lipid A biosynthesis lauroyl acyltransferase	similar to GB:M19267, GB:M19713, GB:M19714, GB:M19715, SP:P06753, SP:P07951, SP:P09493, SP:P09494, PID:339954,  and PID:339956; identified by sequence similarity; putative lipid A biosynthesis lauroyl acyltransferase, putative	Lipid A biosynthesis lauroyl acyltransferase	Lipid A biosynthesis lauroyl acyltransferase	Lipid A biosynthesis lauroyl acyltransferase	LIPID A BIOSYNTHESIS ACYLTRANSFERASE	Lipid A biosynthesis lauroyl acyltransferase	Residues 22 to 327 of 327 are 99 pct identical to residues 1 to 306 of a 306 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287188.1 orf, conserved hypothetical protein	Acyltransferase	Lipid A biosynthesis lauroyl acyltransferase	conserved gene lipid A biosynthesis acyltransferase	similar to lipid A biosynthesis acyltransferase hypothetical protein	Lipid A biosynthesis lauroyl acyltransferase	lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis	similar to Salmonella typhi CT18 lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) (heat shock protein) lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) (heat shock protein)	Similar to Leptospira interrogans lipid A biosynthesis lauroyl acyltransferase HtrB or LA4039 SWALL:Q8EZ22 (EMBL:AE011559) (323 aa) fasta scores: E(): 2.2e-09, 25.33% id in 296 aa, and to Chlorobium tepidum acyltransferase, HtrB/MsbB family CT0211 SWALL:Q8KFV9 (EMBL:AE012801) (310 aa) fasta scores: E(): 3.3e-09, 26.11% id in 314 aa putative lipid A biosynthesis-related protein	Lipid A biosynthesis lauroyl acyltransferase	heat shock protein B; Similar to: HI1527, HTRB_HAEIN lipid A biosynthesis lauroyl acyltransferase	Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis HtrB protein	Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis	lipid A acyltransferase	ortholog to Escherichia coli bnum: b1054; MultiFun: Cell structure 6.1; Cell structure 6.3; Metabolism 1.6.3.3 lipid A biosynthesis lauroyl acyltransferase	lipid A biosynthesis acyltransferase	Code: M; COG: COG1560 heat shock protein	Code: M; COG: COG1560 heat shock protein	lipid A biosynthesis lauroyl acyltransferase	acyltransferase, HtrB/MsbB family	Code: M; COG: COG1560 heat shock protein	acyltransferase	
ECOLI01008	UPF0176 protein yceA	UPF0176 protein PD_1985	UPF0176 protein sll0765	UPF0176 protein XCC2086	identified by match to PFAM protein family HMM PF03107 hypothetical protein	UPF0176 protein SYNW0932	UPF0176 protein PMM1094	UPF0176 protein EF_0748	UPF0176 protein CC_1060	UPF0176 protein RC0167	UPF0176 protein PA0858	UPF0176 protein DR_1100	UPF0176 protein LA_3128	UPF0176 protein Atu4491	UPF0176 protein yceA	UPF0176 protein all0384	UPF0176 protein BA_1881/GBAA_1881/BAS1744	UPF0176 protein Lmo1384	UPF0176 protein Cgl2992/cg3319	UPF0176 protein BC_1804	UPF0176 protein BT9727_1719	UPF0176 protein BPSL1116	UPF0176 protein WD_1135	conserved hypothetical protein	UPF0176 protein CPn_0734/CP_0012/CPj0734/CpB0762	UPF0176 protein Bd2131	UPF0176 protein yceA	UPF0176 protein SP_0095	identified by match to protein family HMM PF00581 rhodanese-like domain protein	
ECOLI01009	Protein yceI	Putative uncharacterized protein	Putative uncharacterized protein TVG0219791	Putative uncharacterized protein Ta0132	UPF0312 protein PA0423	Putative periplasmic protein	UPF0312 protein VVA0736 precursor	Protein yceI	Lmo0796 protein	Uncharacterized BCR	Putative exported protein	conserved hypothetical protein	Protein yceI precursor	UPF0312 protein VC_A0539	Putative exported protein	Putative exported protein	UPF0312 protein SO_3370 precursor	UPF0312 protein ECA1782	Putative uncharacterized protein	UPF0312 protein PSPTO_5071	Putative exported protein	Putative uncharacterized protein	Conserved hypothetical secreted protein	hypothetical conserved protein	Putative uncharacterized protein	YceI-like family protein	UPF0312 protein VPA0850	Putative uncharacterized protein	Protein yceI	
ECOLI01010	Cytochrome b561 homolog 2	Putative uncharacterized protein	Cytochrome B561	pseudo	putative cytochrome b561	Cytochrome b561 homolog 2	Cytochrome b561, putative	Putative membrane protein	Cytochrome b561, putative	Putative cytochrome b561	Putative cytochrome	Nickel-dependent hydrogenase b-type cytochrome subunit	Residues 5 to 192 of 192 are 99 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287191.1 putative cytochrome	Putative membrane protein	Similar to cytochrome B561 homolog 2	IPR000516: Nickel-dependent hydrogenase b-type cytochrome subunit putative inner membrane protein	Cytochrome B561	similar to Salmonella typhi CT18 putative cytochrome putative cytochrome	Putative membrane protein	Putative uncharacterized protein	Putative inner membrane protein	identified by match to protein family HMM PF01292 cytochrome b561 family protein	identified by match to protein family HMM PF01292 cytochrome b561 family protein	identified by match to protein family HMM PF01292 cytochrome b561 family protein	Cytochrome B561, bacterial	Code: C; COG: COG3038 putative cytochrome	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative cytochrome	Code: C; COG: COG3038 putative cytochrome	Cytochrome B561	
ECOLI01012	N-methyl-L-tryptophan oxidase	L-pipecolate oxidase [Source:GeneDB_Spombe;Acc:SPBC354.15]	DEHA2A02750p;similar to uniprot|P78573 Aspergillus fumigatus Fructosyl amine: oxygen oxidoreductase;	Monomeric sarcosine oxidase	Putative sarcosine oxidase	N-methyl-L-tryptophan oxidase	N-methyl-L-tryptophan oxidase	N-methyl-L-tryptophan oxidase	CDS_ID OB2802 sarcosine oxidase	similar to AE008750-11|AAL20090.1| percent identity: 30 in 371 aa sarcosine oxidase	Residues 1 to 372 of 372 are 98 pct identical to residues 1 to 372 of a 372 aa protein from Escherichia coli K12 ref: NP_415577.1 sarcosine oxidase-like protein	N-methyl-L-tryptophan oxidase	IPR000205: NAD-binding site putative sarcosine oxidase	similar to Salmonella typhi CT18 putative sarcosine oxidase putative sarcosine oxidase	N-methyl-L-tryptophan oxidase	Sarcosine oxidase, putative	N-methyl-L-tryptophan oxidase	sarcosine oxidase, putative	Code: E; COG: COG0665 sarcosine oxidase-like protein	Code: E; COG: COG0665 sarcosine oxidase-like protein	putative sarcosine oxidase	pipecolic acid oxidase [Source:HGNC Symbol;Acc:17804]	transcript_id=ENSOCUT00000015275	FAD dependent oxidoreductase	transcript_id=ENSDNOT00000009518	Code: E; COG: COG0665 sarcosine oxidase-like protein	transcript_id=ENSETET00000014409	FAD dependent oxidoreductase	transcript_id=ENSGACT00000018133	
ECOLI01013	Biofilm regulator bssS	Biofilm regulator bssS	Putative uncharacterized protein	Putative uncharacterized protein yceP	pseudo	Similar to unknown protein YceP of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein yceP	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative cytoplasmic protein YceP	Hypothetical protein	Putative uncharacterized protein yceP	Hypothetical protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yceP	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Regulator of biofilm formation	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01014	DNA-damage-inducible protein I	DNA-damage-inducible protein I	DNA-damage-inducible protein I	DNA-damage-inducible protein I	Residues 1 to 100 of 100 are 100 pct identical to residues 26 to 125 of a 125 aa protein from Escherichia coli dbj: BAA35858.1 orf, conserved hypothetical protein	DNA-damage-inducible protein I	DNA damage-inducible protein I	DNA damage-inducible protein I, inhibits UmuD processing	similar to Salmonella typhi CT18 damage-inducible protein damage-inducible protein	DNA-damage-inducible protein I	DNA damage-inducible protein I	damage-inducible protein I	damage-inducible protein I	DNA-damage-inducible protein I	damage-inducible protein I	DNA-damage-inducible protein I	DNA-damage-inducible protein I	Putative uncharacterized protein	DNA-damage-inducible protein I	DNA-damage-inducible protein I identified by match to protein family HMM PF06183	DNA-damage-inducible protein I	DNA-damage-inducible protein I	damage-inducible protein I	DNA-damage-inducible protein I	DinI DNA-damage-inducible protein I	DinI family protein	DNA damage-inducible protein I, inhibits UmuD processing	Putative uncharacterized protein	DNA-damage-inducible protein I	
ECOLI01015	Dihydroorotase	dihydroorotase;	Dihydroorotase, catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines, converting carbamoyl-L-aspartate into dihydroorotate.  [Source:SGD;Acc:S000004412]	similar to sp|P20051 Saccharomyces cerevisiae Dihydroorotase (EC 3.5.2.3) (DHOase) YLR420w URA4, start by similarity	Probable dihydroorotase [Source:GeneDB_Spombe;Acc:SPAC16.03c]	highly similar to sp|P20051 Saccharomyces cerevisiae YLR420w URA4 dihydroorotase singleton, start by similarity	dihydroorotase, putative	Dihydroorotase	highly similar to uniprot|P20051 Saccharomyces cerevisiae YLR420w URA4 dihydroorotase;	DEHA2D10780p;highly similar to uniprot|P20051 Saccharomyces cerevisiae YLR420W URA4 dihydrooratase;	Dihydroorotase	Dihydroorotase	Dihydroorotase	Dihydroorotase	Dihydroorotase	Dihydroorotase	Dihydroorotase	Dihydroorotase	Dihydroorotase	Putative dihydroorotase	Dihydroorotase	Dihydroorotase	Dihydroorotase	Dihydroorotase	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_function: dihydroorotase activity [goid 0004151]; go_process: pyrimidine nucleotide biosynthesis [goid 0006221] dihydroorotase, putative	Dihydroorotase	Dihydroorotase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DIHYDROOROTASE PROTEIN	Dihydroorotase	
ECOLI01016	Uncharacterized lipoprotein yceB	hypothetical protein	Putative lipoprotein yceB	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein yceB	Residues 20 to 205 of 205 are 100 pct identical to residues 1 to 186 of a 186 aa protein from Escherichia coli K12 ref: NP_415581.1 orf, conserved hypothetical protein	Putative lipoprotein	Similar to putative lipoprotein YceB of Escherichia coli	putative outer membrane lipoprotein	Putative lipoprotein	hypothetical protein	Hypothetical protein	Uncharacterized lipoprotein yceB	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	protein of unknown function (DUF1439)	orf conserved hypothetical protein	Putative lipoprotein YceB	Hypothetical protein precursor	Hypothetical protein precursor	Putative lipoprotein precursor	Hypothetical protein precursor	Putative uncharacterized protein yceB	Lipoprotein precursor	Hypothetical protein precursor	putative lipoprotein identified by match to protein family HMM PF07273	protein of unknown function DUF1439 PFAM: protein of unknown function DUF1439 KEGG: son:SO0273 hypothetical protein	
ECOLI01017	Glutaredoxin-2	Grx2	Glutaredoxin 2	Glutaredoxin 2	hypothetical glutaredoxin 2	Glutaredoxin-2	Glutaredoxin 2	Glutaredoxin 2	Glutaredoxin 2	Glutaredoxin-2	Glutaredoxin 2	Residues 1 to 215 of 215 are 98 pct identical to residues 1 to 215 of a 215 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287198.1 glutaredoxin 2	IPR002109: Glutaredoxin; IPR004045: Glutathione S-transferase, N-terminal glutaredoxin 2	similar to Salmonella typhi CT18 glutaredoxin 2 glutaredoxin 2	Glutaredoxin 2	glutaredoxin 2	Glutaredoxin 2 GrxB protein	Similar to Q9CNB4 Grx2 from Pasteurella multocida (215 aa). FASTA: opt: 412 Z-score: 518.8 E(): 5.3e-21 Smith-Waterman score: 412; 32.243 identity in 214 aa overlap. Glutaredoxin 2	Glutaredoxin 2	Glutaredoxin 2	Best Blastp Hit: pir||E81049 glutaredoxin 2 NMA1990 [imported] - Neisseria meningitidis (group B strain MD58, group A strain Z2491) >gi|7226989|gb|AAF42079.1| (AE002523) glutaredoxin [Neisseria meningitidis MC58] >gi|7380621|emb|CAB85210.1| (AL162757) glutaredoxin 2 [Neisseria meningitidis] COG0695 Glutaredoxin and related proteins; Glr2 putative glutaredoxin 2	Code: O; COG: COG2999 glutaredoxin 2	Code: O; COG: COG2999 glutaredoxin 2	Code: O; COG: COG2999 glutaredoxin 2	Glutaredoxin 2	Glutaredoxin 2 Similar to Q9CNB4 Grx2 from Pasteurella multocida (215 aa). FASTA: opt: 412 Z-score: 518.8 E(): 5.3e-21 Smith-Waterman score: 412; 32.243 identity in 214 aa overlap.	Glutaredoxin, GrxB family	Glutaredoxin 2	Glutaredoxin 2	
ECOLI01018	Multidrug resistance protein mdtH	Putative permease	Possible multidrug efflux transporter, MFS family	Major facilitator family protein	Multidrug resistance protein mdtH	Multidrug resistance protein mdtH	Multidrug resistance protein mdtH	Multidrug resistance protein mdtH	Residues 1 to 412 of 412 are 99 pct identical to residues 1 to 412 of a 412 aa protein from Escherichia coli K12 ref: NP_415583.1 orf, conserved hypothetical protein	Multidrug resistance protein mdtH	transmembrane transporter, major facilitator family	major facilitator (MFS) superfamily protein	Multidrug resistance protein mdtH	IPR007114: Major facilitator superfamily putative MFS superfamily transport protein	similar to Salmonella typhi CT18 putative membrane transporter putative membrane transporter	Multidrug resistance protein mdtH	conserved membrane protein	Multidrug resistance protein mdtH	Permease of the major facilitator superfamily	ortholog to Escherichia coli bnum: b1065; MultiFun: Cell processes 5.6.4; Cell structure 6.1; Transport 4.2.A.1, 4.S.126 putative membrane transporter (MFS family)	Code: GEPR; COG: COG0477 conserved hypothetical protein	Code: GEPR; COG: COG0477 conserved hypothetical protein	conserved hypothetical protein	Code: GEPR; COG: COG0477; orf conserved hypothetical protein	Multidrug resistance protein mdtH	Putative membrane protein	Multidrug resistance protein mdtH	transporter, major facilitator family identified by match to protein family HMM PF07690	Membrane protein	
ECOLI01019	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase, putative	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Putative ribosomal-protein-alanine acetyltransferase	Lmo1698 protein	Possible ribosomal-protein-alanine acetyltransferase	Hypothetical ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	identified by match to protein family HMM PF00583 ribosomal-protein-alanine acetyltransferase, putative	similar to GP:14027004; identified by sequence similarity; putative acetyltransferase, GNAT family	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	ribosomal-protein-alanine N-acetyltransferase	RIBOSOMAL-PROTEIN-ALANINE ACETYLTRANSFERASE	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	ribosomal-protein-alanine N-acetyltransferase	Putative ribosomal-protein-alanine N- acetyltransferase	Ribosomal-protein (S5)-alanine N- acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Lin1806 protein	Residues 1 to 194 of 194 are 100 pct identical to residues 1 to 194 of a 194 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287200.1 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	identified by similarity to SP:P09454; match to protein family HMM PF00583 ribosomal-protein-alanine acetyltransferase, putative	Ribosomal-protein-alanine N-acetyltransferase	
ECOLI01020	UPF0502 protein yceH	UPF0502 protein XCC4136	UPF0502 protein PA3453	Uncharacterized protein conserved in bacteria	UPF0502 protein yceH	UPF0502 protein BPSS1373	conserved hypothetical protein	Hypothetical protein yceH	UPF0502 protein VC_A0740	Putative uncharacterized protein	UPF0502 protein ECA2523	UPF0502 protein PSPTO_2686	UPF0502 protein VPA1223	UPF0502 protein yceH	hypothetical protein	UPF0502 protein VV2_0756	Residues 1 to 215 of 215 are 98 pct identical to residues 1 to 215 of a 215 aa protein from Escherichia coli K12 ref: NP_415585.1 orf, conserved hypothetical protein	UPF0502 protein CV_4303	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0502 protein XAC4278	UPF0502 protein YPTB2024	multidrug resistance protein A	UPF0502 protein PP_2442	UPF0502 protein yceH	conserved hypothetical protein	conserved hypothetical protein	identified by similarity to GP:28809591; match to protein family HMM PF04337 conserved hypothetical protein	
ECOLI01021	Virulence factor mviM homolog	Putative oxidoreductase	Probable oxidoreductase	Oxidoreductase, Gfo/Idh/MocA family	Predicted dehydrogenase	Putative virulence factor MviM	Oxidoreductase	Oxidoreductase, Gfo/Idh/MocA family	Putative uncharacterized protein	Lmo1858 protein	Virulence factor mviM	Possible oxidoreductase, Gfo/Idh/MocA family	hypothetical oxidoreductase, Gfo/Idh/MocA family	Oxidoreductase family protein	identified by match to protein family HMM PF01408 oxidoreductase, Gfo/Idh/MocA family	Oxidoreductase, Gfo/Idh/MocA family	Putative virulence factor	Putative oxidoreductase	Product confidence : putative Gene name confidence : hypothetical putative oxidoreductase protein	probable oxidoreductase	Putative oxidoreductase	Oxidoreductase, Gfo/Idh/MocA family	Putative virulence factor	2SCG61.19c, possible oxidoreductase, len: 301 aa; similar to SW:P37168 (MVIM_SALTY) virulence factor MviM from Salmonella typhimurium (307 aa) fasta scores; opt: 467, z-score: 533.5, E(): 3.1e-22, 33.9% identity in 304 aa overlap. Contains Pfam match to entry PF01408 GFO_IDH_MocA, Oxidoreductase family. putative oxidoreductase	Predicted dehydrogenases and related proteins	Predicted dehydrogenase	Lin1972 protein	Residues 12 to 288 of 288 are 98 pct identical to residues 1 to 277 of a 307 aa protein from Escherichia coli K12 ref: NP_415586.1 putative virulence factor	Similar to oxidoreductase hypothetical protein	
ECOLI01022	Virulence factor mviN homolog	Virulence factor mviN protein	Virulence factor	Virulence factor mviN homolog	Virulence factor	Virulence factor mviN homolog	identified by match to PFAM protein family HMM PF02979 hypothetical protein	Putative ABC transporter permease protein	Conserved hypothetical membrane protein in MviN family	Putative uncharacterized protein	Putative uncharacterized protein	EF0084	MviN family protein	Virulence factor mviN	Virulence factor MviN	MviN	Putative uncharacterized protein	Putative integral membrane protein	Virulence factor mviN homolog	MviN protein	Virulence factor-related protein	Virulence factor mviN	Hypothetical membrane spanning protein	Virulence factor MviN	Virulence factor MviN	All0185 protein	MviN-like protein	Integral membrane protein MviN	Virulence factor mviN homolog	
ECOLI01023	Flagella synthesis protein flgN	Flagella synthesis protein flgN	Flagella synthesis protein	Protein of flagellar biosynthesis	Residues 1 to 138 of 138 are 97 pct identical to residues 1 to 138 of a 138 aa protein from Escherichia coli K12 ref: NP_415588.1 protein of flagellar biosynthesis	Flagella synthesis protein FlgN	Flagella synthesis protein FlgN	flagellar biosynthesis: belived to be export chaperone for FlgK and FlgL	similar to Salmonella typhi CT18 flagella synthesis protein FlgN flagella synthesis protein FlgN	Flagella synthesis protein FlgN	Flagella synthesis protein flgN	Code: NUO; COG: COG3418 protein of flagellar biosynthesis	Code: NUO; COG: COG3418 protein of flagellar biosynthesis	putative flagella synthesis protein FlgN	FlgN	Flagella synthesis protein FlgN	Flagella synthesis protein FlgN	Flagella synthesis protein FlgN	Flagella synthesis protein FlgN	Flagella synthesis protein FlgN	flagellar biosynthetic protein Code: NUO; COG: COG3418	Flagella synthesis protein FlgN	flagella synthesis protein FlgN flagellar biosynthesis/type III secretory pathway chaperone	FlgN family protein	Putative uncharacterized protein	Flagella synthesis protein FlgN	FlgN family protein	Export chaperone for FlgK and FlgL	Flagella synthesis protein FlgN	
ECOLI01024	Negative regulator of flagellin synthesis	Negative regulator of flagellin synthesis	Negative regulator of flagellin synthesis	Anti-FliA (Anti-sigma) factor; also known as RflB protein	Residues 1 to 97 of 97 are 100 pct identical to residues 1 to 97 of a 97 aa protein from Escherichia coli K12 ref: NP_415589.1 anti-FliA (anti-sigma) factor; also known as RflB protein	Negative regulator of flagellin synthesis	Negative regulator of flagellin synthesis (Anti- sigma-28 factor) FlgM	anti-FliA (anti-sigma) factor; also known as RflB protein	similar to Salmonella typhi CT18 negative regulator of flagellin synthesis (anti-sigma factor) negative regulator of flagellin synthesis (anti-sigma factor)	Negative regulator of flagellin synthesis	Negative regulator of flagellin synthesis	Code: KNU; COG: COG2747 flagellar protein	anti-sigma factor; also known as RflB protein; Code: KNU; COG: COG2747 anti-FliA factor	negative regulator of flagellin synthesis FlgM	anti-sigma factor; also known as RflB protein; Code: KNU; COG: COG2747 anti-FliA factor	Negative regulator of flagellin synthesis FlgM	Negative regulator of flagellin synthesis	Anti-FliA (Anti-sigma) factor; also known as RflB protein	Negative regulator of flagellin synthesis	Anti-sigma-28 factor, FlgM	Negative regulator of flagellin synthesis	Negative regulator of flagellin synthesis Code: KNU; COG: COG2747	Negative regulator of flagellin synthesis	FlgM Negative regulator of flagellin synthesis	Anti-sigma-28 factor, FlgM	Putative uncharacterized protein	Negative regulator of flagellin synthesis FlgM	Anti-sigma-28 factor, FlgM	Negative regulator of flagellin synthesis	
ECOLI01025	Flagella basal body P-ring formation protein flgA	Putative flagella basal body P-ring formation protein	Flagella basal body P-ring formation protein flgA	Flagella basal body P-ring formation protein	Flagella basal body P-ring formation protein	Flagella basal body P-ring formation protein	Flagella basal body P-ring formation protein flgA	Flagella basal body P-ring formation protein	Flagella basal body P-ring formation protein FlgA	Flagellar biosynthesis; assembly of basal-body periplasmic P ring	Flagella basal body P-ring formation protein flgA	Residues 1 to 219 of 219 are 98 pct identical to residues 1 to 219 of a 219 aa protein from Escherichia coli K12 ref: NP_415590.1 flagellar biosynthesis; assembly of basal-body periplasmic P ring	Flagella basal body P-ring formation protein FlgA	Putative flagella basal body P-ring formation protein	FlgA protein	Flagella basal body P-ring formation protein FlgA	flagellar biosynthesis; assembly of basal-body periplasmic P ring	similar to Salmonella typhi CT18 flagellar basal body P-ring protein FlgA precursor flagellar basal body P-ring protein FlgA precursor	Flagella basal body P-ring formation protein FlgA	Flagella basal body P-ring formation protein FlgA	Flagella basal body P-ring formation protein flgA	Flageller protein FlgA	Flageller protein FlgA	Code: NO; COG: COG1261 flagellar protein for assembly of basal-body periplasmic P ring	Flageller protein FlgA	flagellar biosynthesis; Code: NO; COG: COG1261 assembly of basal-body periplasmic P ring	flagella basal body P-ring formation protein	putative flagella basal body P-ring formation protein	Flageller protein FlgA	
ECOLI01026	Flagellar basal-body rod protein flgB	Flagellar protein	Flagellar basal body protein FlgB	Putative flagellar basal-body rod protein FlgB	Related to flagellar basal-body rod protein	Putative flagellar basal-body rod protein	putative polar flagellar FlgB	Flagellar basal-body rod protein FlgB	Flagellar basal-body rod protein flgB	Flagellar basal-body rod protein FlgB	Flagellar basal-body rod protein FlgB	Flagellar basal-body rod protein FlgB	Flagellar basal-body rod protein FlgB	Flagellar basal-body rod protein	Flagellar basal-body rod protein	Flagella basal body rod protein	Flagellar basal-body rod protein flgB	Flagellar basal-body rod protein FlgB	FLAGELLAR BASAL-BODY ROD PROTEIN FLGB PROXIMAL ROD PROTEIN	Flagellar basal-body rod protein	flagellar basal-body rod protein	Flagellar basal-body rod protein FlgB	Polar flagellar FlgB homolog	Flagellar biosynthesis, cell-proximal portion of basal-body rod	CDS_ID OB1552 flagellar basal-body rod protein	Flagellar basal-body rod protein flgB	Flagellar basal body protein	Flagellar basal body protein FlgB	Residues 1 to 138 of 138 are 100 pct identical to residues 1 to 138 of a 138 aa protein from Escherichia coli K12 ref: NP_415591.1 flagellar biosynthesis, cell-proximal portion of basal-body rod	
ECOLI01027	Flagellar basal-body rod protein flgC	Flagellar biosynthesis, cell-proximal portion of basal-body rod	Flagellar basal-body rod protein flgC	Flagellar basal-body rod protein FlgC	Flagellar basal-body rod protein FlgC	Flagellar basal-body rod protein	Flagellar basal-body rod protein FlgC	Flagellar basal body rod protein FlgC	Flagellar basal-body rod protein flgC	Flagellar basal-body rod protein flgC	Flagellar basal-body rod protein FlgC	Probable flagellar basal body rod protein	Lmo0711 protein	Flagellar basal-body rod protein flgC	Flagellar basal-body rod protein	Flagellar basal-body rod protein	Putative flagellar basal body rod protein FlgC	Flagellar basal-body rod protein flgC	Flagellar basal-body rod protein	Flagellar basal-body rod protein flgC	identified by match to protein family HMM TIGR01395 flagellar basal-body rod protein FlgC	similar to SP:P33909, GB:Z22733, GB:Z22734, PID:404827, PID:404830, and PID:404833; identified by sequence similarity; putative flagellar basal-body rod protein FlgC	Flagellar basal-body rod protein FlgC	Flagellar basal-body rod protein FlgC	Flagellar basal-body rod protein FlgC	Flagellar basal-body rod protein FlgC	Flagellar basal-body rod protein FlgC	Flagellar basal-body rod protein	Flagellar basal-body rod protein	
ECOLI01028	Basal-body rod modification protein flgD	Flagellar protein	Flagellar hook assembly protein FlgD, putative	Flagellar basal-body rod modification protein FlgD	Putative flagellar hook assembly protein	Basal-body rod modification protein FlgD	Flagellar hook capping protein FlgD	Basal-body rod modification protein flgD	Related to basal-body rod modification protein	Putative basal-body rod modification protein	Putative basal-body rod modification protein FlgD	Basal-body rod modification protein flgD	Basal-body rod modification protein FlgD	Basal-body rod modification protein FlgD	Basal-body rod modification protein FlgD	Basal-body rod modification protein FlgD	Basal-body rod modification protein	Basal-body rod modification protein flgD	Basal-body rod modification protein FlgD	Basal-body rod modification protein FlgD	Basal-body rod modification protein FlgD	Polar flagellar FlgD homolog	Flagellar biosynthesis, initiation of hook assembly	Possible basal-body rod modification protein flgD	Basal-body rod modification protein flgD	Flagellar hook capping protein FlgD	Basal-body rod modification protein FlgD	Putative basal-body rod modification protein FlgD	Probable basal-body rod modification protein flgd	
ECOLI01029	Flagellar hook protein flgE	Flagellar hook protein FlgE	Flagellar hook protein flgE	Putative flagellar hook protein FlgE	Related to flagellar hook protein	Lmo0697 protein	Flagellar hook protein flgE	Flagellar hook protein	Putative flagellar hook protein	Flagellar hook protein flgE	Flagellar hook protein flgE	identified by match to protein family HMM PF00460 flagellar hook protein FlgE, putative	Flagellar hook protein FlgE	Flagellar hook protein FlgE	Flagellar hook protein	Flagellar hook protein	Flagellar hook protein flgE	Flagellar hook protein FlgE	Flagellar hook protein FlgE	Flagellar hook protein FlgE	Flagellar biosynthesis, hook protein	CDS_ID OB1564 flagellar hook-basal body protein	flagellar basal body distal rod protein, FlgG	Flagellar hook protein FlgE	Flagellar hook protein	Flagellar hook protein flgE	Lin0705 protein	Residues 241 to 642 of 642 are 98 pct identical to residues 1 to 402 of a 402 aa protein from Escherichia coli K12 ref: NP_415594.1 flagellar biosynthesis, hook protein	Flagellar hook protein FlgE	
ECOLI01030	Flagellar basal-body rod protein flgF	Flagellar protein	Flagellar hook basal-body protein FlgG	Flagellar basal-body rod protein FlgF	Flagellar basal-body rod protein	Flagellar basal body rod protein FlgF	Putative flagellar basal-body rod protein FlgF	Related to flagellar basal-body rod protein	Flagellar basal-body rod protein	putative flagellar basal-body rod protein FlgF	Flagellar basal-body rod protein flgF	Flagellar basal-body rod protein, putative	Flagellar basal-body rod protein FlgF	Flagellar basal-body rod protein FlgF	Flagellar basal-body rod protein FlgF	Flagellar basal-body rod protein	Flagellar basal-body rod protein	PMID: 10411267 best DB hits: BLAST: gb:AAB71784.1; (U95165) FlgF [Agrobacterium tumefaciens]; E=1e-17 ddbj:BAB06168.1; (AP001515) flagellar hook protein [Bacillus; E=1e-16 swissprot:Q06171; FLGF_CAUCR FLAGELLAR BASAL-BODY ROD PROTEIN FLGF; E=3e-16 COG: BH2449; COG1749 Flagellar basal body and hook proteins; E=1e-17 PFAM: PF00460; Flagella basal body rod protein; E=0.00036 FlgF	Flagellar basal-body rod protein flgF	Flagellar basal-body rod protein FlgF	Flagellar basal-body rod protein FlgF	flagellar basal-body rod protein	Flagellar basal-body rod protein FlgF	Polar flagellar FlgF homolog	Flagellar biosynthesis, cell-proximal portion of basal-body rod	Flagellar basal-body rod protein	Flagellar basal-body rod protein flgF	Flagellar basal body and hook proteins	Flagellar basal body rod protein FlgF	
ECOLI01031	Flagellar basal-body rod protein flgG	Flagellar basal-body rod protein FlgG	Flagellar biosynthesis, cell-distal portion of basal-body rod	Flagellar hook basal-body protein FlgG	Flagellar basal-body rod protein FlgG	Flagellar basal-body rod protein	Flagellar basal-body rod protein FlgG	Flagellar basal body rod protein FlgG	Flagellar hook protein	Flagellar basal-body rod protein flgG	Flagellar basal-body rod protein	putative polar flagellar FlgG	Flagellar basal-body rod protein flgG	Flagellar basal-body rod protein FlgG	Flagellar basal-body rod protein flgG	Flagellar basal-body rod protein FlgG	Flagellar basal-body rod protein FlgG	Flagellar basal-body rod protein FlgG	Flagellar basal-body rod protein	Flagellar basal-body rod protein FlgG	Flagellar basal-body rod protein	Flagellar basal-body rod protein	Flagellar basal-body rod protein flgG	Flagellar basal-body rod protein FlgG	pseudo	FLAGELLAR BASAL-BODY ROD PROTEIN DISTAL ROD PROTEIN	Flagellar basal-body rod protein FlgG	Polar flagellar FlgG homolog	Flagellar basal-body rod protein flgG	
ECOLI01032	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein precursor	Flagellar L-ring protein	Flagellar L-ring protein	putative flagellar L-ring protein FlgH	Flagellar L-ring protein precursor	similar to SP:Q52950; identified by sequence similarity; putative flagellar L-ring protein FlgH	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein precursor	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein precursor	Flagellar L-ring protein precursor	Flagellar L-ring protein 1	Flagellar L-ring protein	Flagellar L-ring protein	Flagellar L-ring protein	Residues 3 to 237 of 237 are 100 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli dbj: BAA35888.1 Flagellar basal body L-ring protein precursor	
ECOLI01033	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein precursor	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Putative flagellar P-ring protein FlgI	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein precursor	identified by match to PFAM protein family HMM PF02119 flagellar P-ring protein FlgI	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein	Flagellar P-ring protein precursor	Flagellar P-ring protein	PMID: 7921252 best DB hits: BLAST: pir:E81292; flagellar P-ring protein Cj1462 [imported] -; E=5e-16 pir:G72242; flagellar P-ring protein - Thermotoga maritima (strain; E=2e-11 pir:A71957; flagellar P-ring protein - Helicobacter pylori (strain; E=3e-11 COG: Cj1462; COG1706 Flagellar basal-body P-ring protein; E=5e-17 PFAM: PF02119; Flagellar P-ring protein; E=0.00098 flagellar P-ring protein	predicted by Codon_usage predicted by Homology predicted by FrameD FLAGELLAR P-RING PRECURSOR TRANSMEMBRANE PROTEIN	Flagellar P-ring protein	Flagellar P-ring protein	
ECOLI01034	Peptidoglycan hydrolase flgJ	Peptidoglycan hydrolase flgJ	Peptidoglycan hydrolase FlgJ	Flagellar protein FlgJ	Putative peptidoglycan hydrolase	Hypothetical FlgJ, Muramidase	Peptidoglycan hydrolase flgJ	Peptidoglycan hydrolase flgJ	Peptidoglycan hydrolase	Peptidoglycan hydrolase	Flagellar protein FlgJ	Peptidoglycan hydrolase	Peptidoglycan hydrolase FlgJ	Peptidoglycan hydrolase	Flagellar protein FlgJ	Peptidoglycan hydrolase flgJ	Peptidoglycan hydrolase flgJ	Muramidase	Residues 11 to 323 of 323 are 98 pct identical to residues 1 to 313 of a 313 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287215.1 flagellar biosynthesis	Flagellar protein FlgJ	Mannosyl-glycoprotein endo-beta-N- acetylglucosamidases	Probable flagellar protein flgj	Peptidoglycan hydrolase FlgJ	flagellar biosynthesis protein FlgJ	conserved gene muramidase, peptidoglycan hydrolase FlgJ	flagellar biosynthesis protein FlgJ	Flagellar protein flgJ	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark flagellar protein	IPR000423: Flagellar protein FlgJ; IPR002901: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase flagellar biosynthesis	
ECOLI01035	Flagellar hook-associated protein 1	Flagellar hook-associated protein FlgK	Flagellar protein	Flagellar hook-associated protein 1 FlgK	Putative flagellar hook-associated protein	Flagellar hook-associated protein FlgK	Probable flagellar hook-associated protein 1	Flagellar hook-associated protein 1	Related to Flagellar hook-associated protein 1	Lmo0705 protein	Putative flagellar hook-associated protein	Flagellar hook-associated protein 1	FlgK, flagellar hook-associated protein	Flagellar hook-associated protein 1	flagellar hook-associated protein, putative	Flagellar hook-associated protein FlgM	Flagellar hook-associated protein 1	Flagellar hook-associated protein 1	Flagellar hook-associated protein 1	Flagellar hook-associated protein 1	PMID: 8158647 best DB hits: BLAST: pir:A81293; probable flagellar hook-associated protein Cj1466; E=8e-31 pir:G71853; flagellar hook-associated protein 1 (hap1) -; E=9e-29 gb:AAG61142.1; (AF333079) flagellar hook-associated protein 1; E=2e-28 COG: Cj1466; COG1256 Flagellar hook-associated protein; E=8e-32 PFAM: PF00460; Flagella basal body rod protein; E=7.7e-08 probable flagellar hook-associated protein	Flagellar hook-associated protein 1	Flagellar hook-associated protein 1	Flagellar hook-associated protein FlgK	Flagellar hook-associated protein 1	FLAGELLAR HOOK-ASSOCIATED PROTEIN 1	Flagellar hook-associated protein 1	flagellar hook-associated protein 1 (HAP1)	Flagellar hook-associated protein 1	
ECOLI01036	Flagellar hook-associated protein 3	Flagellar protein	Flagellar hook-associated protein 3	Flagellar hook-associated protein 3	Lmo0706 protein	Flagellar hook-associated protein 3	Flagellar hook-associated protein 3	Putative flagellar hook-associated protein	Flagellar hook-associated protein 3	identified by similarity to SP:P96501 flagellar hook-associated protein FlgL, putative	Flagellar hook-associated protein 3	Flagellar hook-associated protein 3	Flagellar hook-associated protein FlgL	Flagellar hook-associated protein 3	Flagellar-hook associated protein	Flagellar hook-associated protein 3	Flagellar hook-associated protein 3	flagellar hook-associated protein 3	Flagellar hook-associated protein 3	Hook-associated protein type 3	Flagellar biosynthesis; hook-filament junction protein	CDS_ID OB2506 flagellar-hook associated protein 3	Flagellar hook-associated protein 3	Flagellin and related hook-associated proteins	Lin0714 protein	Flagellar hook-associated protein 3	Flagellin, N-terminus	FlgL protein	Probable flagellar hook-associated protein 3	
ECOLI01037	Ribonuclease E	Rne	Ribonuclease E	Ribonuclease E	Ribonuclease E	Putative ribonuclease E	Putative ribonuclease E	Ribonuclease E	Ribonuclease E	Ribonuclease E	Ribonuclease E	Ribonuclease E	Ribonuclease E	Ribonuclease E	Ribonuclease E	Ribonuclease E	RNase E, membrane attachment, mRNA turnover, maturation 5S RNA	ribonuclease E	Ribonuclease E	Residues 1 to 1063 of 1063 are 98 pct identical to residues 1 to 1061 of a 1061 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287218.1 RNase E, membrane attachment, mRNA turnover, maturation 5S RNA	Ribonuclease E	Ribonucleases G and E	Probable ribonuclease e (Rnase e) protein	Ribonuclease E	Probable ribonuclease E	IPR003029: RNA binding S1 RNase E	similar to Salmonella typhi CT18 ribonuclease E ribonuclease E	Ribonuclease E	ribonuclease E	
ECOLI01038	Uncharacterized protein yceQ	Hypothetical protein yceQ	Uncharacterized protein yceQ	Residues 1 to 124 of 124 are 99 pct identical to residues 1 to 124 of a 124 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287219.1 orf, conserved hypothetical protein	conserved hypothetical protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	YceQ protein	Predicted protein	Predicted protein	
ECOLI01039	Ribosomal large subunit pseudouridine synthase C	Uncharacterized protein C18B11.02c [Source:GeneDB_Spombe;Acc:SPAC18B11.02c]	Pseudouridine synthase	Pseudouridine synthase	similarity to HYPOTHETICAL PROTEIN OF THE FAMILY OF PSEUDOURIDINE SYNTHASES YD36_YEAST;05_0680, similarity to HYPOTHETICAL PROTEIN OF THE FAMILY OF PSEUDOURIDINE SYNTHASES YD36_YEAST, gene found by Glimmer;	Ribosomal large subunit pseudouridine synthase C	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase C	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase C	Ribosomal large subunit pseudouridine synthase C	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase C	Pseudouridine synthase	Pseudouridine synthase	putative 23S rRNA ribosomal pseudouridinesynthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase C	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase C	Ribosomal large subunit pseudouridine synthase C	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase C	Pseudouridine synthase	
ECOLI01040	Maf-like protein yceF	Maf-like protein XCC1013	Maf-like protein CC_0002	Maf-like protein NMB1909	Maf-like protein PA2972	Maf-like protein VV1269	Maf-like protein Atu0002	Maf-like protein yceF	Maf-like protein BPSL2446	Hypothetical Maf-like protein	Maf-like protein Bd2448	Maf-like protein yceF	identified by match to TIGR protein family HMM TIGR00172 maf protein	Maf-like protein VC_2027	Maf-like protein BP2447	Maf-like protein BB3762	Maf-like protein SO_2782	Maf-like protein ECA1791	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Maf-like protein PSPTO_3837	Maf-like protein BPP3311	Maf-like protein BMA0526	Maf-like protein BMEI2059	Maf-like protein VP2060	Maf-like protein DIP0654	Maf-like protein yceF	Maf-like protein VV1_3015	Septum formation maf protein	Residues 1 to 207 of 207 are 100 pct identical to residues 1 to 207 of a 207 aa protein from Escherichia coli K12 ref: NP_415605.1 orf, conserved hypothetical protein	

ECOLI01041	Uncharacterized protein yceD	Putative uncharacterized protein	Uncharacterized protein HI0159	Putative uncharacterized protein	Putative uncharacterized protein	Predicted metal-binding/nucleic acid-binding protein	Uncharacterized protein yceD	Conserved hypothetical protein	Hypothetical protein yceD	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2059	Uncharacterized protein yceD	Predicted metal-binding	Residues 1 to 173 of 173 are 99 pct identical to residues 1 to 173 of a 173 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287222.1 orf, conserved hypothetical protein	Predicted metal-binding, possibly nucleic acid- binding protein	Putative uncharacterized protein	Similar to probable membrane protein YceD of Escherichia coli	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative metal-binding	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	
ECOLI01042	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	putative ribosomal protein L32 (rpL32)	identified by match to PFAM protein family HMM PF01783 ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE 50S RIBOSOMAL PROTEIN L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	50S ribosomal protein L32	
ECOLI01043	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	identified by match to TIGR protein family HMM TIGR00182 fatty acid/phospholipid synthesis protein	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Putative fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Fatty acid/phospholipid synthesis protein plsX	Phosphate acyltransferase	Phosphate acyltransferase	Probable fatty acid/phospholipid synthesis protein	Phosphate acyltransferase	
ECOLI01044	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-(Acyl-carrier-protein) synthase III	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	UPF0219 protein TV0132	3-oxoacyl-[acyl-carrier-protein] synthase 3	UPF0219 protein Ta1455	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1	3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2	3-oxoacyl-[acyl-carrier-protein] synthase III	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1	3-oxoacyl-[acyl-carrier-protein] synthase III protein 1	3-oxoacyl-[acyl-carrier-protein] synthase 3	3-oxoacyl-[acyl-carrier-protein] synthase 3	Putative 3-oxoacyl-(acyl-carrier-protein)synthase III	3-oxoacyl-(Acyl-carrier-protein) synthase III	3-oxoacyl-[acyl-carrier-protein] synthase 3	
ECOLI01045	Malonyl CoA-acyl carrier protein transacylase	similar to tr|Q9UUS5 Colletotrichum gloeosporioides Malonyl CoA-acyl carrier protein transacylase, hypothetical start	Malonyl-CoA:acyl carrier protein transacylase	Malonyl CoA-acyl carrier protein transacylase, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC11G7.05c]	Malonyl-CoA-[acyl-carrier-protein] transacylase	Malonyl CoA-acyl carrier protein transacylase	Malonyl CoA-ACP transacylase	malonyl coa-acyl carrier protein transacylase precursor	Malonyl CoA-ACP transacylase	Malonyl CoA-acyl carrier protein transacylase	DEHA2G23672p;some similarities with uniprot|Q12283 Saccharomyces cerevisiae YOR221C MCT1 Predicted malonyl-CoA:ACP transferase putative component of a type-II mitochondrial fatty acid synthase that produces intermediates for phospholipid remodeling and similar to CA4087|IPF5013 Candida albicans IPF5013;	similar to SP:P07049,  and PID:455284; identified by sequence similarity; putative malonyl CoA-acyl carrier protein transacylase	Malonyl CoA-acyl carrier protein transacylase	Malonyl CoA-acyl carrier protein transacylase	Malonyl-CoA:Acyl carrier protein transacylase	Malonyl coenzyme A-acyl carrier protein transacylase	Malonyl CoA-acyl carrier protein transacylase	Malonyl CoA-acyl carrier protein transacylase	Malonyl CoA-acyl carrier protein transacylase	Malonyl CoA-acyl carrier protein transacylase	Malonyl CoA-acyl carrier protein transacylase	FabD	Malonyl-CoA-[acyl-carrier-protein] transacylase	Malonyl CoA-acyl carrier protein transacylase	Malonyl CoA-acyl carrier protein transacylase	S-malonyltransferase	Malonyl CoA-acyl carrier protein transacylase	Malonyl-CoA-[acyl-carrier-protein] transacylase	Malonyl-CoA:acyl carrier protein transacylase	
ECOLI01046	3-oxoacyl-[acyl-carrier-protein] reductase	3-oxoacyl-[ACP] reductase	3-oxoacyl-[acyl-carrier-protein] reductase 1	3-oxoacyl-[ACP] reductase	3-oxoacyl-[acyl-carrier-protein] reductase	3-oxoacyl-(Acyl-carrier-protein) reductase	Putative 3-oxoacyl-ACP reductase	3-oxoacyl-[acyl-carrier-protein] reductase	3-oxoacyl-[acyl-carrier protein] reductase	3-oxoacyl-[acyl-carrier protein] reductase	3-oxoacyl-(Acyl-carrier-protein) reductase	3-oxoacyl-[acyl-carrier-protein] reductase	3-oxoacyl-(Acyl-carrier-protein) reductase	FabG	3-oxoacyl-[acyl-carrier-protein] reductase	3-oxoacyl-(Acyl-carrier-protein) reductase	3-oxoacyl-(Acyl carrier protein) reductase	3-oxoacyl-[acyl-carrier-protein] reductase	FabG protein	3-oxoacyl-[ACP] reductase	3-oxoacyl-[acyl-carrier protein] reductase	3-oxoacyl-(Acyl-carrier-protein) reductase	Putative 3-oxoacyl-(acyl-carrier-protein) reductase, FabG	3-oxoacyl-(Acyl-carrier-protein) reductase	similar to GP:15156125; identified by sequence similarity; putative 3-oxoacyl-(acyl-carrier-protein) reductase	3-oxoacyl-(Acyl-carrier protein) reductase	3-oxoacyl-(Acyl-carrier-protein) reductase	3-oxoacyl-[acyl-carrier-protein] reductase	
ECOLI01047	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	identified by match to PFAM protein family HMM PF00550 acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein 1	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein	Acyl carrier protein acpP	Acyl carrier protein	Acyl carrier protein	
ECOLI01048	3-oxoacyl-[acyl-carrier-protein] synthase 2	Mitochondrial beta-keto-acyl synthase with possible role in fatty acid synthesis; required for mitochondrial respiration. [Source:SGD;Acc:S000000863]	similar to sp|P39525 Saccharomyces cerevisiae YER061c CEM1 3-oxoacyl-[acyl-carrier protein] synthase, start by similarity	3-oxoacyl-(Acyl carrier protein) synthase II	similar to sp|P39525 Saccharomyces cerevisiae YER061c CEM1 beta-keto-acyl-ACP synthase, mitochondrial singleton, start by similarity	3-oxoacyl-[acyl-carrier-protein] synthase	3-oxoacyl-(Acyl-carrier-protein) synthase II	3-oxoacyl-(ACP) synthase	3-oxoacyl-[acyl-carrier-protein] synthase 2	3-oxoacyl-[ACP] synthase II	similar to uniprot|P39525 Saccharomyces cerevisiae YER061c CEM1;	DEHA2B13948p;similar to uniprot|O94297 Schizosaccharomyces pombe SPBC887 SPBC887.13c protein;	identified by match to PFAM protein family HMM PF04170 3-oxoacyl-(acyl-carrier-protein) synthase II	3-oxoacyl-[acyl-carrier-protein] synthase II	3-oxoacyl-(Acyl-carrier-protein) synthase II	Putative 3-oxoacyl-ACP synthase II	3-oxoacyl-[acyl-carrier-protein] synthase II	3-oxoacyl-[acyl-carrier-protein] synthase II	3-oxoacyl-[acyl-carrier-protein] synthase II	3-oxoacyl-(Acyl-carrier-protein) synthase II	3-oxoacyl-(Acyl-carrier-protein) synthase II	3-oxoacyl-[acyl carrier protein] synthase II	3-oxoacyl-(Acyl-carrier-protein) synthase II	Beta-ketoacyl-acyl carrier protein synthase II	3-oxoacyl-[acyl-carrier-protein] synthase	3-oxoacyl-(Acyl carrier protein) synthase II	3-oxoacyl-(Acyl-carrier-protein) synthase	3-oxoacyl-acyl carrier protein synthase II	
ECOLI01049	Aminodeoxychorismate lyase	4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	hypothetical 4-amino-4-deoxychorismate lyase(ADC lyase)	4-amino-4-deoxychorismate lyase	Aminodeoxychorismate lyase	4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	Putative 4-amino-4-deoxychorismate lyase	Branched-chain amino acid aminotransferase	Residues 1 to 269 of 269 are 98 pct identical to residues 1 to 269 of a 269 aa protein from Escherichia coli O157:H7 ref: NP_309501.1 4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	similar to aminodeoxychorismate lyase (PabC) hypothetical protein	conserved gene 4-amino-4-deoxychorismate lyase	similar to aminodeoxychorismate lyase (PabC) hypothetical protein	4-amino-4-deoxychorismate lyase	IPR001544: Aminotransferase, class IV 4-amino-4-deoxychorismate lyase	similar to Salmonella typhi CT18 4-amino-4-deoxychorismate lyase 4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	hypothetical aminotransferase Aminotransferases class-IV	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme 4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	4-amino-4-deoxychorismate lyase	
ECOLI01050	Uncharacterized protein yceG	4-amino-4-deoxychorismate lyase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein HI0457	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE1773	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted periplasmic solute-binding protein	Putative uncharacterized protein	Putative uncharacterized protein	4-amino-4-deoxychorismate lyase	Putative uncharacterized protein	Putative secreted protein	Putative uncharacterized protein	Lmo1499 protein	Putative uncharacterized protein	Probable aminodeoxychorismate lyase	Putative lipoprotein	hypothetical protein	Putative uncharacterized protein BB0709	Predicted periplasmic solute-binding protein	
ECOLI01051	Thymidylate kinase	Thymidylate kinase	Probable thymidylate kinase	Probable thymidylate kinase	Thymidylate kinase	Probable thymidylate kinase	Thymidylate kinase	Probable thymidylate kinase	Thymidylate kinase	Probable thymidylate kinase	Thymidylate kinase	Thymidylate kinase	Thymidylate kinase	Probable thymidylate kinase	Probable thymidylate kinase	similar to GB:X64177, GB:X64834, GB:S68948, SP:P02795, SP:P04731, SP:P04732, SP:P04733, SP:P07438, SP:P13640, SP:P80294, SP:P80295, SP:P80296, SP:P80297, PID:31435, PID:517349,  and PID:517351; identified by sequence similarity; putative thymidylate kinase	Thymidylate kinase	Thymidylate kinase	Thymidylate kinase	Thymidylate kinase	Probable thymidylate kinase	Probable thymidylate kinase	Thymidylate kinase	Thymidylate kinase	Thymidylate kinase	Thymidylate kinase	Thymidylate kinase	Thymidylate kinase	
ECOLI01052	DNA polymerase III subunit delta'	DNA polymerase III delta' subunit	DNA polymerase III subunit delta'	HolB	DNA polymerase III subunit delta'	DNA polymerase III, delta prime subunit	Putative DNA polymerase III subunit	DNA polymerase III, delta prime subunit	DNA polymerase III, delta' subunit	DNA polymerase III, delta' subunit	Putative DNA polymerase	hypothetical DNA polymerase III, delta prime subunit	DNA polymerase III delta' subunit	DNA polymerase III, delta' subunit	identified by match to protein family HMM TIGR00678 DNA polymerase III, delta prime subunit	DNA polymerase III, delta prime subunit	DNA polymerase III, delta' subunit	DNA polymerase III delta' subunit	DNA polymerase III subunit delta'	DNA polymerase III, delta prime subunit	DNA polymerase III, delta prime subunit	DNA polymerase III, delta prime subunit	DNA polymerase III, delta' subunit	DNA polymerase III subunit delta'	ATPase involved in DNA replication	DNA polymerase III, delta prime subunit	Residues 1 to 334 of 334 are 100 pct identical to residues 1 to 334 of a 334 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287233.1 DNA polymerase III, delta prime subunit	DNA polymerase III subunit delta'	HolB protein	
ECOLI01053	Uncharacterized deoxyribonuclease ycfH	SeC-independent protein TATD	Uncharacterized deoxyribonuclease MJ1582	Sec-independent transport protein TatD	Membrane targeting/translocation system protein	Uncharacterized deoxyribonuclease sll1786	Uncharacterized deoxyribonuclease MG009	Uncharacterized deoxyribonuclease MG009 homolog	Uncharacterized deoxyribonuclease HI0454	Conserved protein	Mg-dependent DNase	Putative uncharacterized protein PH1208	NEQ456	identified by match to TIGR protein family HMM TIGR01784 mttC protein, putative	Sec-independent protein translocase protein TatD, putative	Possible deoxyribonuclease similar to TatD	TatD-related protein	TatD related DNAse	Putative uncharacterized protein PF0859	hypothetical protein	Possible deoxyribonuclease, TatD family	Putative uncharacterized protein CPE2520	Hydrolase, TatD family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative TatD-related deoxyribonuclease protein	Putative uncharacterized protein	Mg-dependent DNase	
ECOLI01054	PTS system glucose-specific EIICB component	Glucose-specific IIBC component of PTS system	PTS system, glucose-specific, IIABC component	PTS system, glucose-specific IIABC component	PTS system, glucose-specific IIABC component	Putative PTS system, glucose-specific IIBC	PTS system glucose-specific EIICB component	identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830 PTS system, glucose-specific IIABC component	PTS system, glucose-specific IIBC component	PTS system, glucose-specific IIBC component	PTS system glucose-specific EIICB component	PTS system, glucose-specific enzyme II, A component	PTS system, glucose-specific IIBC component	PTS system glucose-specific EIICB component	CDS_ID OB1882 PTS system, glucose-specific enzyme II, A component	PTS system, glucose-specific enzyme II, A component	PTS system glucose-specific EIICB component	Glucose-specific PTS system IIABC component	PTS system, glucose-specific IIBC component	Residues 1 to 477 of 477 are 99 pct identical to residues 1 to 477 of a 477 aa protein from Escherichia coli O157:H7 ref: NP_309506.1 PTS system, glucose-specific IIBC component	PTS system, glucose-specific IIBC component	identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830 PTS system, IIABC components	Protein-N p-phosphohistidine-sugar phosphotransferase	PTS enzyme II glucose-specific factor IIABC component	InterProMatches:IPR004719, IPR001996; glucose transport and phosphorylation,Molecular Function: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (GO:0008982), Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401), Cellular Component: integral to membrane (GO:0016021),Molecu phosphotransferase system (PTS) glucose-specific enzyme IICBA component	PTS system, glucose-specific enzyme II, ABC component	IPR001996: Phosphotransferase system PTS, EIIB domain Sugar Specific PTS family, glucose-specific IIBCcomponent	similar to Salmonella typhi CT18 PTS system, glucose-specific IIBC component PTS system, glucose-specific IIBC component	PTS system, glucose-specific IIBC component	
ECOLI01055	FhuE receptor	FhuE receptor	Outer membrane receptor for ferric iron uptake	IPR000531: TonB-dependent receptor protein outer membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid uptake	Outer membrane receptor for ferric siderophore	Outer membrane receptor for Fe(III)-coprogen	outer membrane receptor for ferric iron uptake	identified by match to protein family HMM PF00593; match to protein family HMM PF07660; match to protein family HMM PF07715; match to protein family HMM TIGR01783 outer membrane ferripyoverdine receptor	Code: P; COG: COG4773 outer membrane receptor for ferric iron uptake	Code: P; COG: COG4773 outer membrane receptor for ferric iron uptake	TonB-dependent siderophore receptor	Code: P; COG: COG4773 outer membrane receptor for ferric iron uptake	FhuE receptor	FhuE receptor	TonB-dependent siderophore receptor TIGRFAM: TonB-dependent siderophore receptor PFAM: TonB-dependent receptor; TonB-dependent receptor, plug KEGG: ilo:IL1581 outer membrane receptor for ferric siderophore	outer membrane receptor for ferric iron uptake Code: P; COG: COG4773	ferric-rhodotorulic acid outer membrane transporter FhuE	TonB-dependent siderophore receptor precursor	Putative uncharacterized protein	TonB-dependent siderophore receptor FhuE	Ferric-rhodotorulic acid outer membrane transporter	TonB-dependent siderophore receptor FhuE	TonB-dependent siderophore receptor precursor	TonB-dependent siderophore receptor FhuE	Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid	Putative outer membrane porin, receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)- rhodotrulic acid uptake	Putative uncharacterized protein	Putative uncharacterized protein	TonB-dependent siderophore receptor	

ECOLI01056	HIT-like protein hinT	Bis(5'-nucleosyl)-tetraphosphatase	Uncharacterized HIT-like protein MJ0866	Hit-like protein	HIT family protein	Histidine triad-like protein	protein kinase c inhibitor-like protein, putative	Histidine triad protein	Uncharacterized HIT-like protein slr1234	Histidine triad protein homolog	HIT-like protein HI0961	highly similar to uniprot|Q04344 Saccharomyces cerevisiae YDL125c YHI1;	DEHA2G14982p;similar to uniprot|Q04344 Saccharomyces cerevisiae YDL125C HNT1 Adenosine 5'-monophosphoramidase;	NEQ519	identified by match to PFAM protein family HMM PF01230 HIT family protein	HIT family protein	Putative Hit-like protein	Putative uncharacterized protein	Uncharacterized HIT-like protein aq_141	HIT (Histidine triad) family protein	Putative uncharacterized protein	HINT hypothetical histidine triad nucleotide-binding protein	HIT (Histidine triad) family protein	Probable HIT family protein	Protein kinase C inhibitor 1	HitA protein	Putative uncharacterized protein	Probable HIT family protein	Putative histidine triad (HIT) family protein	
ECOLI01057	Uncharacterized protein ycfL	Hypothetical protein ycfL	Putative lipoprotein	Putative uncharacterized protein ycfL	Residues 1 to 125 of 125 are 98 pct identical to residues 1 to 125 of a 125 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287238.1 orf, conserved hypothetical protein	Putative lipoprotein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	Putative outer membrane lipoprotein	Code: R; COG: COG5633 conserved hypothetical protein	Code: R; COG: COG5633 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG5633; orf conserved hypothetical protein	Putative outer membrane lipoprotein YcfL	Putative lipoprotein precursor	Putative uncharacterized protein ycfL	Lipoprotein precursor	Putative lipoprotein precursor	conserved hypothetical protein Code: R; COG: COG5633	Lipoprotein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ycfL	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein precursor	Probable lipoprotein	Putative lipoprotein	
ECOLI01058	Uncharacterized protein ycfM	Hypothetical protein ycfM	Putative lipoprotein	Uncharacterized protein ycfM	Residues 1 to 189 of 194 are 95 pct identical to residues 1 to 189 of a 214 aa protein from Escherichia coli dbj: BAA35912.1 Fibronectin-binding protein B	Putative lipoprotein	Similar to putative outer membrane lipoprotein YcfM of Escherichia coli	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	Putative outer membrane lipoprotein	ortholog to Escherichia coli bnum: b1105 putative fibronectin-binding protein	Code: R; COG: COG3417 conserved hypothetical protein	Code: R; COG: COG3417 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG3417; orf conserved hypothetical protein	Putative uncharacterized protein	Putative lipoprotein precursor	Fibronectin-binding protein B	conserved hypothetical protein identified by similarity to GB:CAH21689.1	Lipoprotein precursor	Putative lipoprotein	conserved hypothetical protein Code: R; COG: COG3417	Lipoprotein precursor	conserved hypothetical protein	Fibronectin-binding protein B precursor	Putative fibronectin-binding protein	Putative uncharacterized protein	Putative lipoprotein	
ECOLI01059	Thiamine kinase	Thiamine kinase	Thiamine kinase	Putative uncharacterized protein	Putative uncharacterized protein VP0968	Thiamine kinase	Putative uncharacterized protein	Residues 1 to 274 of 274 are 98 pct identical to residues 1 to 274 of a 274 aa protein from Escherichia coli K12 ref: NP_415624.1 putative beta-glucosidase	Putative uncharacterized protein	Similar to putative beta-glucosidase YcfN of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	beta-glucosidase	Thiamine kinase	Code: M; COG: COG0510 putative beta-glucosidase	Code: M; COG: COG0510 putative beta-glucosidase	conserved hypothetical protein	Code: M; COG: COG0510 putative beta-glucosidase	Thiamine kinase	Hypothetical protein	Thiamine kinase	Hypothetical protein	Hypothetical protein	putative beta-glucosidase Code: M; COG: COG0510	Hypothetical protein	conserved hypothetical protein YcfN	Aminoglycoside phosphotransferase	Putative beta-glucosidase	
ECOLI01060	Beta-hexosaminidase	Beta-hexosaminidase	Beta-hexosaminidase	Beta-hexosaminidase	Glycosyl hydrolase, family 3	Beta-glucosidase-like protein	Beta-hexosaminidase	Beta-hexosaminidase	Beta-hexosaminidase	Beta-hexosaminidase	Glycosyl hydrolase	Beta-hexosaminidase	All1831 protein	Beta-glucosidase-related glycosidases	Putative secreted glycosyl hydrolase	Putative beta-hexosaminidase	putative beta-hexosaminidase	Beta-N-acetylhexosaminidase, putative	Beta-hexosaminidase	glycosyl hydrolase, family 3	Beta-hexosaminidase	Possible beta-glucosidase	Beta-hexosaminidase	Beta-hexosaminidase	Beta-hexosaminidase	Beta-hexosaminidase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE HYDROLASE GLYCOSIDASE PROTEIN	Beta-hexosaminidase	Beta-hexosaminidase	
ECOLI01061	UPF0227 protein ycfP	UPF0227 protein VV2369	UPF0227 protein ycfP	conserved hypothetical protein	UPF0227 protein ycfP	UPF0227 protein VC_1892	UPF0227 protein SO_2251	UPF0227 protein ECA1814	UPF0227 protein VP0969	UPF0227 protein ycfP	UPF0227 protein VV1_2072	Residues 1 to 199 of 199 are 100 pct identical to residues 1 to 199 of a 199 aa protein from Escherichia coli O157:H7 ref: NP_309513.1 orf, conserved hypothetical protein	UPF0227 protein YPO1616/y1776/YP_2238	putative esterase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0227 protein YPTB2448	hypothetical protein	Predicted esterase Hypothetical protein	UPF0227 protein ycfP	Code: R; COG: COG3150 conserved hypothetical protein	Code: R; COG: COG3150 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG3150; orf conserved hypothetical protein	UPF0227 protein ycfP	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein ycfP	Hypothetical protein	conserved hypothetical protein identified by match to protein family HMM PF05728	
ECOLI01062	NADH dehydrogenase	NADH dehydrogenase	NADH dehydrogenase	NADH dehydrogenase	Putative dehydrogenase	hypothetical sulfide dehydrogenase [flavocytochrome c] flavoprotein subunit	NADH dehydrogenase	NADH dehydrogenase, FAD-containing subunit	NADH dehydrogenase	Pyridine nucleotide-disulphide oxidoreductase	NADH dehydrogenase	Pyridine nucleotide-disulphide oxidoreductase	NADH dehydrogenase	putative NADH dehydrogenase	NADH dehydrogenase	identified by match to protein family HMM PF00070 pyridine nucleotide-disulphide oxidoreductase	NADH dehydrogenase	NADH dehydrogenase	NADH dehydrogenase	NADH dehydrogenase	NADH dehydrogenase	Respiratory NADH dehydrogenase	Putative NADH dehydrogenase	Residues 10 to 443 of 443 are 99 pct identical to residues 1 to 434 of a 434 aa protein from Escherichia coli K12 ref: NP_415627.1 respiratory NADH dehydrogenase	NADH dehydrogenase	Putative NADH dehydrogenase	NADH dehydrogenase	identified by similarity to SP:P00393; match to protein family HMM PF00070 NADH dehydrogenase, putative	Putative NADH dehydrogenase	
ECOLI01063	Uncharacterized protein ycfJ	Putative secreted protein	Hypothetical protein ycfJ	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein ycfJ	Residues 14 to 192 of 192 are 99 pct identical to residues 1 to 179 of a 179 aa protein from Escherichia coli K12 ref: NP_415628.1 orf, conserved hypothetical protein	Putative exported protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative exported protein	Putative uncharacterized protein	Putative outer membrane lipoprotein	outer membrane protein	conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3134 conserved hypothetical protein	Code: S; COG: COG3134 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	17 kDa surface antigen	Rickettsia 17 kDa surface antigen	predicted outer membrane lipoprotein COG3134	Code: S; COG: COG3134; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein precursor	histidine kinase	
ECOLI01064	Uncharacterized HTH-type transcriptional regulator ycfQ	Putative gamma-butyrolactone receptor protein	Putative TetR-family regulatory protein	Hypothetical transcriptional regulator ycfQ	Putative uncharacterized protein	Putative TetR-family transcriptional regulator	TetR-family regulatory protein	Transcriptional regulator, TetR family	Putative TetR-family transcriptional regulator	Putative uncharacterized protein ycfQ	probable transcriptional regulator	Residues 1 to 236 of 236 are 99 pct identical to residues 1 to 236 of a 236 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287245.1 ycfQ gene product	Transcription regulator	Transcriptional regulator protein	IPR001647: Bacterial regulatory protein TetR, HTH motif putative transcriptional repressor (TetR/AcrR family)	similar to Salmonella typhi CT18 putative TetR-family regulatory protein putative TetR-family regulatory protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pr : putative regulator putative regulator (TetR/AcrR family)	Putative transcriptional repressor	identified by similarity to OMNI:NTL03ST1095; match to protein family HMM PF00440 transcriptional regulator, TetR family	identified by match to protein family HMM PF00440 transcriptional regulator, TetR family	Code: K; COG: COG1309 conserved hypothetical protein	Code: K; COG: COG1309 conserved hypothetical protein	transcriptional regulator, TetR family	transcriptional regulator, TetR family	transcriptional regulator, TetR family	transcriptional regulator, TetR family	Code: K; COG: COG1309; orf conserved hypothetical protein	Transcriptional regulator, TetR family	transcriptional regulator, TetR family PFAM: regulatory protein, TetR: (0.0011) KEGG: rba:RB13253 probable TetR-family transcriptional regulator, ev=3e-27, 34% identity	
ECOLI01065	UPF0379 protein ycfR	UPF0379 protein ycfR precursor	Multiple stress resistance protein bhsA	Residues 1 to 70 of 70 are 98 pct identical to residues 16 to 85 of a 85 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287246.1 orf, conserved hypothetical protein	putative outer membrane protein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative outer membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ycfR	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ycfR	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative secreted protein	Protein YcfR	Protein YcfR	Protein YcfR	
ECOLI01066	Uncharacterized protein ycfS	Uncharacterized protein conserved in bacteria	Putative exported protein	hypothetical protein	Hypothetical protein ycfS	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology HYPOTHETICAL PROTEIN	Putative uncharacterized protein ycfS	Putative uncharacterized protein	Residues 2 to 321 of 321 are 99 pct identical to residues 1 to 320 of a 320 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287247.1 orf, conserved hypothetical protein	pseudo	Similar to unknown protein YnhG and YcfS of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative uncharacterized protein	Putative periplasmic protein	Code: S; COG: COG1376 conserved hypothetical protein	Code: S; COG: COG1376 conserved hypothetical protein	Code: S; COG: COG1376; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein ycfS	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein Code: S; COG: COG1376	Hypothetical protein precursor	conserved hypothetical protein	ErfK/YbiS/YcfS/YnhG family protein precursor	Putative enzyme	
ECOLI01067	Transcription-repair-coupling factor	Transcription-repair coupling factor	Transcription-repair coupling factor	Transcription-repair-coupling factor	Transcription-repair coupling factor	Transcription-repair-coupling factor	similar to GB:M81651, GB:M81652, SP:Q02383, PID:1147570, PID:307418,  and PID:338239; identified by sequence similarity; putative transcription-repair coupling factor	Transcription-repair coupling factor	Transcription-repair coupling factor	Putative transcriptional-repair coupling factor	Transcription-repair coupling factor	Transcriptional-repair coupling factor	Transcriptional-repair coupling factor	Transcription-repair coupling factor	Transcription-repair coupling factor	Transcription-repair coupling factor	Transcription-repair-coupling factor	Transcription-repair coupling factor	Mfd	Transcription-repair coupling protein Mfd	Transcription-repair coupling factor	Transcription-repair coupling factor	Transcription-repair coupling factor	Transcription-repair coupling factor	Transcription-repair coupling factor	Transcriptional-repair coupling factor	Transcription-repair coupling factor	Related to transcription-repair coupling factor	Transcription-repair coupling factor	
ECOLI01068	Inner membrane protein ycfT	Hypothetical protein ycfT	Putative uncharacterized protein ycfT	hypothetical protein	Acyltransferase 3 family	Predicted membrane protein	Residues 1 to 357 of 357 are 99 pct identical to residues 1 to 357 of a 357 aa protein from Escherichia coli K12 ref: NP_415633.1 orf, conserved hypothetical protein	Code: S; COG: COG4763 conserved hypothetical protein	Code: S; COG: COG4763 conserved hypothetical protein	acyltransferase 3	predicted membrane protein COG4763	Code: S; COG: COG4763; orf conserved hypothetical protein	Putative uncharacterized protein	Acyltransferase 3	acyltransferase 3	Acyltransferase 3	Putative uncharacterized protein ycfT	acyltransferase 3 PFAM: acyltransferase 3 KEGG: rpc:RPC_4855 acyltransferase 3	Predicted membrane protein	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG4763	Hypothetical protein	conserved hypothetical protein	Putative acyltransferase	Acyltransferase 3	Acyltransferase 3	Putative acyltransferase	Putative uncharacterized protein	Predicted inner membrane protein	
ECOLI01069	Lipoprotein-releasing system transmembrane protein lolC	Lipoprotein releasing system transmembrane protein lolE	Lipoprotein-releasing system transmembrane protein lolC	Lipoprotein releasing system transmembrane protein	Lipoprotein-releasing system transmembrane protein lolC	Putative uncharacterized protein	Putative uncharacterized protein	Lipoprotein-releasing system transmembrane protein lolC	Putative uncharacterized protein	Putative permease	Putative ABC transporter integral membrane subunit	ABC transporter, membrane spanning protein	ABC transporter integral membrane subunit	Related to lipoprotein releasing system transmembrane protein	Putative uncharacterized protein	putative ABC transporter integral membrane subunit	Lipoprotein releasing system transmembrane protein	Lipoprotein-releasing system transmembrane protein lolC	identified by match to PFAM protein family HMM PF02537 ABC transporter, permease protein	Lipoprotein releasing system, permease protein	Putative uncharacterized protein	Lipoprotein releasing system transmembrane protein LolE	Lipoprotein releasing system transmembrane protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Lipoprotein-releasing system transmembrane protein lolC	Conserved hypothetical integral membrane protein	LIPOPROTEIN RELEASING SYSTEM TRANSMEMBRANE PROTEIN LOLE	Putative uncharacterized protein VP0977	Lipoprotein-releasing system transmembrane protein lolC	
ECOLI01070	Lipoprotein-releasing system ATP-binding protein lolD	Lipoprotein-releasing system ATP-binding protein lolD	putative ABC transporter ATP-binding protein	Lipoprotein-releasing system ATP-binding protein lolD	Lipoprotein-releasing system ATP-binding protein lolD	Lipoprotein-releasing system ATP-binding protein lolD	Lipoprotein-releasing system ATP-binding protein lolD	Lipoprotein-releasing system ATP-binding protein lolD	Residues 1 to 233 of 233 are 98 pct identical to residues 31 to 263 of a 263 aa protein from Escherichia coli dbj: BAA35937.1 heterocyst maturation protein (devA) homolog	Lipoprotein-releasing system ATP-binding protein lolD	Lipoprotein-releasing system ATP-binding protein lolD	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase ABC transporter, ATP-binding protein	similar to Salmonella typhi CT18 ABC transporter ATP-binding subunit ABC transporter ATP-binding subunit	Lipoprotein-releasing system ATP-binding protein lolD	Similar to: HI1549, LOLD_HAEIN lipoprotein releasing system ATP-binding protein LolD	ABC-type transport systems, involved in lipoprotein release, ATPase components PhnL protein	Lipoprotein-releasing system ATP-binding protein lolD	lipoprotein releasing system ATP-binding protein	Code: V; COG: COG1136 putative ATP-binding component of a transport system	Code: V; COG: COG1136 putative ATP-binding component of a transport system	Lipoprotein releasing system, ATP-binding protein	lipoprotein releasing system ATP-binding protein lolD	Code: V; COG: COG1136 putative ATP-binding component of a transport system	Lipoprotein-releasing system ATP-binding protein lolD	Lipoprotein releasing system, ATP-binding protein	Lipoprotein-releasing system ATP-binding protein lolD	Lipoprotein releasing system, ATP-binding protein	Lipoprotein releasing system, ATP-binding protein	lipoprotein releasing system, ATP-binding protein identified by similarity to SP:P75957; match to protein family HMM PF00005; match to protein family HMM TIGR02211	
ECOLI01071	Lipoprotein-releasing system transmembrane protein lolE	Lipoprotein-releasing system transmembrane protein lolC	Putative uncharacterized protein	Putative ABC transporter, integral membrane protein	ABC transporter integral membrane subunit	putative ABC transporter, integral membrane protein	Lipoprotein releasing system transmembrane protein lolE	Putative uncharacterized protein	Lipoprotein releasing system transmembrane protein LolC, putative	Lipoprotein releasing system transmembrane protein	Uncharacterized membrane protein BUsg_286	Putative uncharacterized protein VP0979	Putative kinase	Putative uncharacterized protein	Lipoprotein releasing system, permease component	Residues 1 to 414 of 414 are 99 pct identical to residues 1 to 414 of a 414 aa protein from Escherichia coli K12 ref: NP_415636.1 putative kinase	Lipoprotein releasing system, transmembrane protein	Lipoprotein releasing system transmembrane protein lolE	ABC transporter integral membrane subunit	IPR001356: Homeobox ABC transporter, integral membrane protein	similar to Salmonella typhi CT18 ABC transporter integral membrane subunit ABC transporter integral membrane subunit	ABC tranporter/lipoprotein releasing system, permease subunit lolE	Lipoprotein releasing system transmembrane protein LolE	Similar to: HI1548, LOLE_HAEIN ABC-type transport system, involved in lipoprotein release, permease component	ABC-type transport systems, involved in lipoprotein release, permease components Hypothetical protein	ABC-type transport system, involved in lipoprotein release, permease component	Integral membrane protein ABC transporter	identified by similarity to SP:P75958; match to protein family HMM PF02687; match to protein family HMM TIGR02212 lipoprotein releasing system transmembrane protein LolE	lipoprotein releasing system transmembrane protein	
ECOLI01072	N-acetyl-D-glucosamine kinase	Transcriptional regulator	N-acetyl-D-glucosamine kinase	N-acetyl-D-glucosamine kinase	Transcriptional regulator, ROK family	N-acetyl-D-glucosamine kinase	Putative ROK family protein	N-acetyl-D-glucosamine kinase	N-acetyl-D-glucosamine kinase	N-acetyl-D-glucosamine kinase	ROK family-glucose kinase or transcriptional regulator	N-acetyl-D-glucosamine kinase	N-acetyl-D-glucosamine kinase	GLUCOKINASE	N-acetyl-D-glucosamine kinase	Residues 1 to 303 of 303 are 98 pct identical to residues 1 to 303 of a 303 aa protein from Escherichia coli K12 ref: NP_415637.1 putative NAGC-like transcriptional regulator	N-acetyl-D-glucosamine kinase	Sugar kinase and transcription regulator	Transcriptional regulator protein	IPR000504: RNA-binding region RNP-1 (RNA recognition motif); IPR000600: ROK family putative regulator (NagC/XylR family)	similar to Salmonella typhi CT18 putative ROK-family protein putative ROK-family protein	N-acetyl-D-glucosamine kinase	glucokinase	Similar to: HI0182, YAJF_HAEIN conserved hypothetical protein	Transcriptional regulators NagC protein	N-acetyl-D-glucosamine kinase	Code: KG; COG: COG1940 putative NAGC-like transcriptional regulator	Pfam: ROK family (a group of proteins that includes repressors, ORFs and kinases). ROK family protein	Code: KG; COG: COG1940 putative NAGC-like transcriptional regulator	
ECOLI01073	NAD-dependent deacetylase	similar to DEHA0C01507g Debaryomyces hansenii IPF 2468.1, hypothetical start	NAD-dependent deacetylase 1	NAD-dependent deacetylase 2	transcriptional regulatory protein sir2 homologue, putative	NAD-dependent deacetylase	NAD-dependent deacetylase 1	DEHA2C01386p;highly similar to CA4170|IPF7784 Candida albicans IPF778;	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	Putative uncharacterized protein	NAD-dependent deacetylase	NAD-dependent deacetylase	Putative nicotinate mononucleotide:5,6- dimethylbenzimidazole phosphoribosyltransferase	NAD-dependent deacetylase	Putative NAD-dependent protein deacetylase	NAD-dependent deacetylase	NAD-dependent deacetylase	transcriptional regulator Sir2 family	
ECOLI01074	Inner membrane protein ycfZ	Putative uncharacterized protein	Putative uncharacterized protein ycfZ	conserved hypothetical protein	Putative membrane protein	Predicted inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein ycfZ	Putative uncharacterized protein ycfZ	Putative uncharacterized protein ycfZ	Putative uncharacterized protein ycfZ	Putative uncharacterized protein ycfZ	Predicted inner membrane protein	Putative uncharacterized protein ycfZ	YcfZ protein	Predicted inner membrane protein	predicted inner membrane protein	Inner membrane protein YcfZ	
ECOLI01075	Inner membrane protein ymfA	Probable membrane protein YmfA	Putative uncharacterized protein ymfA	putative inner membrane protein	Putative membrane protein	Predicted inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ymfA	Putative uncharacterized protein ymfA	Putative uncharacterized protein	Putative uncharacterized protein ymfA	Putative uncharacterized protein ymfA	Predicted inner membrane protein	Putative uncharacterized protein	pseudo	Predicted inner membrane protein	predicted inner membrane protein	Predicted inner membrane protein	
ECOLI01076	Spermidine/putrescine-binding periplasmic protein	Putrescine/spermidine binding protein, conjectural	Spermidine/putrescine-binding periplasmic protein 2	Spermidine/putrescine ABC transporter	Probable spermidine/putrescine ABC transporter	Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein	PotD	Probable binding protein component of ABC transporter	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein	ABC-type spermidine/putrescine-binding periplasmic protein	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein	Spermidine/putrescine-binding periplasmic protein	Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein	Lmo0810 protein	Spermidine/putrescine-binding protein	Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein	putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein	PotD protein	Spermidine/putrescine-binding periplasmic protein	spermidine/putrescine ABC transporter spermidine/putrescine binding protein	Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein	identified by match to protein family HMM PF01547 spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein	Spermidine/putrescine-binding periplasmic	Polyamine ABC transporter, periplasmic polyamine- binding protein	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein	Spermidine/putrescine ABC transporter, periplasmic binding protein	Spermidine/putrescine-binding periplasmic protein	probable periplasmic spermidine/putrescine-binding protein	spermidine/putrescine ABC transporter (substrate-binding protein)	
ECOLI01077	Spermidine/putrescine transport system permease protein potC	Spermidine/putrescine transport system permease protein potC homolog	Spermidine/putrescine transport system permease protein potC homolog	Spermidine/putrescine transport system permease protein potC	Spermidine/putrescine ABC transporter permease	Putative polyamine ABC transporter permease protein	Probable spermidine/putrescine ABC transporter	Spermidine/putrescine ABC transporter, permease protein	Spermidine/putrescine ABC transporter, permease protein	PotC	Spermidine/putrescine ABC transporter, permease protein	ABC-type spermidine/putrescine transport system, permease component II	Spermidine/putrescine ABC transporter, permease protein	Spermidine/putrescine transport system permease protein potC	Spermidine/putrescine transport system permease protein PotC	Spermidine/putrescine ABC transporter, permease protein	Lmo0809 protein	Spermidine/putrescine transport system permease protein potC	Spermidine/putrescine ABC transporter, permease	Putative ABC transport system, membrane protein	putative spermidine/putrescine ABC transporter, permease protein	Spermidine/putrescine transport system permease protein	Spermidine/putrescine transport system permease protein potC	spermidine/putrescine ABC transporter permease	identified by match to protein family HMM PF00528 spermidine/putrescine ABC transporter, permease protein	ABC-type spermidine/putrescine transport system, permease component II	Polyamine ABC transporter, permease protein	Spermidine/putrescine ABC transporter, permease protein	Spermidine/putrescine ABC transporter, permease protein	
ECOLI01078	Spermidine/putrescine transport system permease protein potB	Spermidine/putrescine ABC transporter, permease protein	Spermidine/putrescine transport system permease protein potB	Spermidine/putrescine ABC transporter permease	Probable spermidine/putrescine ABC transporter	Spermidine/putrescine ABC transporter, permease protein	PotB	ABC-type spermidine/putrescine transport system, permease component I	ABC transporter, membrane spanning protein	Spermidine/putrescine transport system permease protein potB	Putative ABC transport system, membrane protein	putative spermidine/putrescine ABC transporter, permease protein	Spermidine/putrescine ABC transporter, permease protein	Spermidine/putrescine transport system permease protein	Spermidine/putrescine transport system permease protein potB	Polyamine ABC transporter, permease protein	Spermidine/putrescine ABC transporter, permease protein	Spermidine/putrescine transport system permease protein	Spermidine/putrescine ABC transporter permease protein	Product confidence : probable Gene name confidence : putative probable spermidineputrescine ABC transporter permease protein	ABC transporter permease protein	spermidine/putrescine ABC transporter (permease)	Putative spermidine/putrescine ABC transporter	Spermidine/putrescine ABC transporter, permease protein	Spermidine/putrescine transport system permease	CDS_ID OB3155 spermidine:putrescine ABC transporter permease	SPERMIDINE/PUTRESCINE ABC TRANSPORTER PERMEASE PROTEIN POTB	SC8B7.09c, probable polyamine ABC-transporter integr al membrane protein, len: 309 aa; similar to many e.g. POTB _ECOLI spermidine/putrescine transport system permease (275 aa), fasta scores; opt: 548 z-score: 685.1 E(): 6.6e-31, 3 6.9% identity in 274 aa overlap. Contains Pfam match to ent ry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component, score 38.20, E-value 1.8e -07 putative polyamine ABC-transporter integral memb rane protein	ABC-type spermidine/putrescine transport system, permease component I	
ECOLI01079	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine ABC transporter, ATP- binding protein	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine ABC transporter	Putative polyamine ABC transporter ATP-binding protein	Alpha glucoside ABC transporter ATP-binding protein	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine transport ATP-binding protein potA	ABC transporter, nucleotide binding/ATPase protein	Spermidine/putrescine import ATP-binding protein potA	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	putative spermidine/putrescine ABC transporter,ATP-binding protein	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine import ATP-binding protein potA	identified by match to protein family HMM PF00005 ABC transporter, ATP-binding protein	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine ABC transporter ATP-binding protein	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine import ATP-binding protein potA	CDS_ID OB3154 spermidine:putrescine ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Spermidine/putrescine import ATP-binding protein potA	

ECOLI01080	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	Peptidase T	putative peptidase T	Peptidase T	Peptidase T	identified by match to protein family HMM PF01546; match to protein family HMM TIGR01882 peptidase T	Peptidase T	Peptidase T	Aminotripeptidase	PMID: 97132636 PMID: 8978088 PMID: 5405261 best DB hits: BLAST: swissprot:P55179; PEPT_BACSU PEPTIDASE T (AMINOTRIPEPTIDASE); E=4e-82 gb:AAG55931.1; AE005327_1 (AE005327) putative peptidase T; E=3e-74 swissprot:P29745; PEPT_ECOLI PEPTIDASE T (AMINOTRIPEPTIDASE); E=4e-74 COG: BS_pepT; COG2195 Di- and tripeptidases; E=3e-83 PFAM: PF01546; Peptidase family M20/M25/M40; E=0.0021 aminopeptidase T	Peptidase T	aminotripeptidase	Peptidase T	Peptidase T	Peptidase T	Peptidase T	CDS_ID OB0531; peptidase T aminotripeptidase	
ECOLI01081	Uncharacterized protein ycfD	Uncharacterized protein HI0396	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Hypothetical protein ycfD	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ycfD	Residues 1 to 376 of 376 are 99 pct identical to residues 1 to 376 of a 376 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287320.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Similar to unknown protein YcfD of Escherichia coli	similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	similar to conserved hypothetical protein hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	IPR007113: Cupin domain putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	hypothetical protein	Similar to: HI0396, YCFD_HAEIN conserved hypothetical cupin superfamily metalloenzyme	Uncharacterized ACR Hypothetical protein	Putative uncharacterized protein	
ECOLI01082	Sensor protein phoQ	Sensor protein	Adaptive-response sensory-kinase sasA	Virulence sensor histidine kinase phoQ	Sensor protein phoQ	Sensor protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN	Sensor protein phoQ	two-component sensor protein	Residues 1 to 486 of 486 are 99 pct identical to residues 1 to 486 of a 486 aa protein from Escherichia coli K12 ref: NP_415647.1 sensor protein PhoQ	Sensor protein	Sensor protein	IPR003660: Histidine kinase, HAMP region; IPR004358: Bacterial sensor protein, C-terminal; IPR005467: Histidine kinase sensory kinase protein in two-component regulatory system with PhoP, ligand is Mg+	similar to Salmonella typhi CT18 sensor protein PhoQ, regulator of virulence determinants sensor protein PhoQ, regulator of virulence determinants	Sensor protein	Virulence sensor histidine kinase phoQ	predicted histidine kinase-like ATPase	Code: T; COG: COG0642 sensor protein PhoQ	Code: T; COG: COG0642 sensor protein PhoQ	two-component sensor kinase	periplasmic sensor signal transduction histidine kinase	Signal transduction histidine kinase COG0642	Code: T; COG: COG0642 sensor protein PhoQ	Sensor protein	PhoQ protein	Sensor protein kinase precursor	Sensor protein	periplasmic sensor signal transduction histidine kinase	integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein KEGG: abo:ABO_1366 PhoQ	
ECOLI01083	Transcriptional regulatory protein phoP	Transcriptional regulatory protein phoP	Two-component response regulator of virulence determinants	Transcriptional regulatory protein phoP	Residues 1 to 223 of 223 are 99 pct identical to residues 1 to 223 of a 223 aa protein from Escherichia coli K12 ref: NP_415648.1 transcriptional regulatory protein	Response regulator protein	Two-component response regulator PhoP	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response regulator in two-component regulatory system with PhoQ, transcribes genes expressed under low Mg+ concentration (OmpR family)	similar to Salmonella typhi CT18 transcriptional regulatory protein PhoP, regulator of virulence determinants transcriptional regulatory protein PhoP, regulator of virulence determinants	Regulator protein PhoP	transcriptional regulator	Virulence transcriptional regulatory protein phoP	identified by similarity to OMNI:NTL01XA3918; match to protein family HMM PF00072; match to protein family HMM PF00486 DNA-binding response regulator	identified by similarity to SP:P23836; match to protein family HMM PF00072; match to protein family HMM PF00486 DNA-binding response regulator PhoP	Response regulator receiver:Transcriptional regulatory protein, C-terminal	Code: TK; COG: COG0745 transcriptional regulatory protein	Code: TK; COG: COG0745 transcriptional regulatory protein	two-component response regulator protein	Code: TK; COG: COG0745 transcriptional regulatory protein	Transcriptional regulatory protein PhoP	Response regulator protein	Transcriptional regulatory protein	Response regulator protein	Response regulator protein	transcriptional regulatory protein Code: TK; COG: COG0745	Response regulator protein	transcriptional regulatory protein PhoP	Two component transcriptional regulator, winged helix family precursor	Two component transcriptional regulator, winged helix family	
ECOLI01084	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	PurB	Adenylosuccinate lyase	Adenylosuccinate lyase	Putative adenylosuccinate lyase protein	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	putative adenylosuccinate lyase	Adenylosuccinate lyase	adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	Adenylosuccinate lyase	
ECOLI01085	UPF0274 protein ycfC	UPF0274 protein XCC1963	UPF0274 protein HI0638	UPF0274 protein PM1850	UPF0274 protein PA2627	UPF0274 protein VV1342	UPF0274 protein ycfC	conserved hypothetical protein	UPF0274 protein ycfC	High frequency lysogenization protein hflD homolog	UPF0274 protein SO_2634	High frequency lysogenization protein hflD homolog	High frequency lysogenization protein hflD homolog	High frequency lysogenization protein hflD homolog	High frequency lysogenization protein hflD	High frequency lysogenization protein hflD homolog	High frequency lysogenization protein hflD homolog	Residues 3 to 215 of 215 are 99 pct identical to residues 1 to 213 of a 213 aa protein from Escherichia coli K12 ref: NP_415650.1 orf, conserved hypothetical protein	UPF0274 protein YPO1637/y1798/YP_1767	High frequency lysogenization protein hflD homolog	High frequency lysogenization protein hflD homolog	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR007451: Protein of unknown function DUF489 membrane associated protein of unknown function	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	High frequency lysogenization protein hflD homolog	UPF0274 protein YPTB2431	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative protein involved in purine metabolism	High frequency lysogenization protein hflD homolog	hypothetical cytosolic protein	
ECOLI01086	tRNA-specific 2-thiouridylase mnmA	hypothetical protein;similar to tRNA-specific 2-thiouridylase, mitochondrial;	tRNA-specific 2-thiouridylase, responsible for 2- thiolation of the wobble base of mitochondrial tRNAs; human ortholog is implicated in myoclonus epilepsy associated with ragged red fibers (MERRF).  [Source:SGD;Acc:S000002191]	similar to sp|Q12093 Saccharomyces cerevisiae YDL033c tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, hypothetical start	tRNA-specific 2-thiouridylase mnmA	Mitochondrial tRNA-specific 2-thiouridylase 1 [Source:GeneDB_Spombe;Acc:SPAC23H4.04]	similar to sp|Q12093 Saccharomyces cerevisiae YDL033c singleton, start by similarity	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	Probable tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	similar to uniprot|Q12093 Saccharomyces cerevisiae YDL033c;	DEHA2D04818p;similar to uniprot|Q12093 Saccharomyces cerevisiae YDL033C SLM3 Mitochondrial protein with a potential role in protein synthesis;	similar to GB:M27390, GB:L27614, PID:292793, PID:457274,  and PID:975616; identified by sequence similarity; putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	tRNA-specific 2-thiouridylase mnmA	
ECOLI01087	Phosphatase nudJ	7, 8-dihydro-8-oxoguanine-triphosphatase	Putative uncharacterized protein	Putative uncharacterized protein	Putative MutT-family protein	Putative hydrolase	Putative Nudix hydrolase ymfB	MutT/nudix family protein	Putative MutT family protein	MutT/nudix family protein	NUDIX domain protein	Phosphatase nudJ	Residues 1 to 153 of 153 are 100 pct identical to residues 1 to 153 of a 153 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287348.1 putative phosphohydrolase	Putative uncharacterized protein	NUDIX hydrolase	Putative nudix hydrolase protein	Similar to probable dNTP pyrophosphohydrolase YmfB of Escherichia coli	Probable MutT-like protein	Phosphohydrolase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark 7,8-dihydro-8-oxoguanine-triphosphatase	IPR000086: NUDIX hydrolase putative MutT-like protein	similar to Salmonella typhi Ty2 putative MutT-family protein putative MutT-family protein	7,8-dihydro-8-oxoguanine-triphosphatase	Putative uncharacterized protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative Nudix hydrolase	MutT/nudix family protein	NTP pyrophosphohydrolases including oxidative damage repair enzymes MutT protein	MutT/nudix family protein	Putative MutT-like protein	
ECOLI01088	Ribosomal large subunit pseudouridine synthase E	Ribosomal large subunit pseudouridine synthase E	Ribosomal large subunit pseudouridine synthase E	Pseudouridine synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase E	Ribosomal large subunit pseudouridine synthase E	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase E	Pseudouridine synthase	Pseudouridine synthase	putative pseudouridine synthase family 1protein	Ribosomal large subunit pseudouridine synthase E	Pseudouridine synthase	Pseudouridine synthase	probable pseudouridylate synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase E	Ribosomal large subunit pseudouridine synthase E	Ribosomal large subunit pseudouridine synthase E	Residues 1 to 207 of 207 are 99 pct identical to residues 1 to 207 of a 207 aa protein from Escherichia coli K12 ref: NP_415653.1 orf, conserved hypothetical protein	Ribosomal large subunit pseudouridine synthase E	Pseudouridine synthase	Similar to ribosomal large subunit pseudouridine synthase (Pseudouridylate synthase) hypothetical protein	conserved gene pseudouridine synthase	Similar to ribosomal large subunit pseudouridine synthase (Pseudouridylate synthase) hypothetical protein	probable pseudouridine synthase	identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093 RNA pseudouridylate synthase	Probable pseudouridine synthase	
ECOLI01089	Isocitrate dehydrogenase	Isocitrate dehydrogenase, probable	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Probable isocitrate dehydrogenase	hypothetical NADP-dependent isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	putative isocitrate dehydrogenase, specific forNADP+	Isocitrate dehydrogenase	isocitrate dehydrogenase	identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183 isocitrate dehydrogenase, NADP-dependent	Isocitrate dehydrogenase	Isocitrate dehydrogenase	Isocitrate dehydrogenase	
ECOLI01090	Uncharacterized protein ymfD	Putative uncharacterized protein	Putative S-adenosyl-L-methionine-dependent methyltransferases	
ECOLI01091	Uncharacterized protein ymfE	Putative uncharacterized protein	
ECOLI01092	Bacteriophage T4 late gene expression-blocking protein	
ECOLI01093	Prophage lambda integrase	Phage integrase, putative	identified by match to protein family HMM PF00589; match to protein family HMM PF02899 site-specific recombinase, phage integrase family	Code: L; COG: COG0582 putative integrase fragment	Code: L; COG: COG0582 putative integrase	phage integrase	Phage integrase	Phage integrase family protein	Integrase family protein	Putative uncharacterized protein	Phage integrase	
ECOLI01094	Excisionase-like protein from lambdoid prophage 14	Excisionase	Putative excisionase	Excisionase	Putative excisionase	Putative excisionase	Excisionase, putative	Putative excisionase	Phage excisionase	Phage excisionase	Predicted excisionase	Putative integrase of prophage CP-933X	excisionase Prophage ECO103_P05	


ECOLI01098	Putative lambdoid prophage e14 repressor protein C2	Peptidase S24, S26A and S26B	Code: KT; COG: COG1974 putative phage repressor	Putative phage repressor	putative prophage repressor PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B KEGG: pst:PSPTO_0571 repressor protein C2	putative phage repressor phage-associated	Putative uncharacterized protein	Repressor protein phage e14; e14 prophage	Repressor protein phage e14; e14 prophage	jgi|Capca1|140801|e_gw1.25984.2.1	Repressor protein CI	
ECOLI01099	Uncharacterized protein ymfT	Putative uncharacterized protein	Putative DNA-binding transcriptional regulator; e14 prophage	
ECOLI01100	Uncharacterized protein ymfL	unknown	conserved hypothetical protein	Putative uncharacterized protein ymfL	e14 prophage; predicted DNA-binding transcriptional regulator phage-associated	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative phage-encoded DNA-binding protein	Putative uncharacterized protein	Putative nucleic acid-binding protein; e14 prophage	Putative nucleic acid-binding protein; e14 prophage	Putative uncharacterized protein	putative phage regulatory protein CII Prophage ECO103_P01	Putative prophage DNA-binding protein	
ECOLI01101	Uncharacterized protein ymfM	conserved hypothetical protein phage-associated	Putative uncharacterized protein ymfM	Putative uncharacterized protein ymfM	hypothetical protein Prophage ECO103_P01	
ECOLI01101	Uncharacterized protein ymfM	conserved hypothetical protein phage-associated	Putative uncharacterized protein ymfM	Putative uncharacterized protein ymfM	hypothetical protein Prophage ECO103_P01	
ECOLI01102	Uncharacterized protein ymfN	Putative terminase large subunit	identified by match to protein family HMM PF03354 phage terminase, large subunit, putative	Terminase, large subunit	Terminase	Putative uncharacterized protein	Terminase	Putative uncharacterized protein	Terminase large subunit	InterProMatches:IPR005021 hypothetical protein	phage terminase-like protein large subunit	Prophage pi2 protein 30, terminase	terminase large subunit	Ortholog of S. aureus MRSA252 (BX571856) SAR1519 terminase large subunit	best blastp match emb|CAB63682.1| (AJ251790) hypothetical protein [Lactobacillus casei bacteriophage A2] hypothetical phage protein	Phage terminase, large subunit, putative	terminase large subunit, C-terminal region	Similar to Staphylococcus aureus temperate phage phiSLT terminase large subunit TR:Q9B0E3 (EMBL:AB045978) (563 aa) fasta scores: E(): 0, 96.092% id in 563 aa, and to Staphylococcus aureus prophage phiPV83 phi PVL Orf 2 homologue TR:Q9MBQ2 (EMBL:AB044554) (564 aa) fasta scores: E(): 5.9e-28, 26.740% id in 546 aa terminase large subunit	identified by match to protein family HMM PF03354 prophage LambdaSa04, terminase, large subunit	phage Terminase	Code: R; COG: COG4626 hypothetical bacteriophage protein	identified by similarity to GP:12697860; match to protein family HMM PF03354 prophage L54a, terminase, large subunit, putative	putative terminase, large subunit	phage terminase large subunit	Terminase large subunit	Terminase large subunit	Phage terminase-like protein, large subunit COG4626	phage terminase, large subunit, putative identified by match to protein family HMM PF03354	terminase large subunit	
ECOLI01103	Uncharacterized protein ymfR	Putative uncharacterized protein ymfR	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ymfR	Putative uncharacterized protein ymfR	
ECOLI01104	Putative uncharacterized protein ymfO	Portal protein	best blastp match gb|AAK33546.1| (AE006512) putative portal protein - phage associated [Streptococcus pyogenes M1 GAS] putative phage portal protein	Portal protein	
ECOLI01105	Putative protein ymfP	Putative uncharacterized protein	Lin1287 protein	Putative bacteriophage protein	Putative bacteriophage protein	Phage FluMu protein gp47	Bacteriophage protein	phage FluMu protein gp47	Baseplate J-like protein	hypothetical phage protein	Baseplate J-like protein	Putative bacteriophage protein	hypothetical protein	Bacteriophage V tail protein	Baseplate J-like protein	Bacteriophage protein	putative Mu-like phage protein gp47 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin	conserved hypothetical protein Code: S; COG: COG3299	Bacteriophage protein	Putative bacteriophage protein	bacteriophage V tail protein	Baseplate J family protein	Baseplate assembly protein J	Tail protein, putative	Putative uncharacterized protein	conserved hypothetical protein	Phage-related protein	Baseplate J-like protein	
ECOLI01106	Uncharacterized protein ymfQ in lambdoid prophage e14 region	Putative phage tail protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative bacteriophage protein GP48	Putative uncharacterized protein	Bacteriophage tail protein	conserved hypothetical protein	tail protein, putative	Code: S; COG: COG3778 putative tail protein	Code: S; COG: COG3778 putative tail protein	tail protein, putative	Putative bacteriophage protein	conserved hypothetical protein	Bacteriophage V tail protein	phage protein	conserved hypothetical protein	Bacteriophage protein	Putative uncharacterized protein	conserved hypothetical protein Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein Code: S; COG: COG3778	Bacteriophage protein	conserved hypothetical protein phage-associated	Putative uncharacterized protein	Putative uncharacterized protein	Tail protein, putative	Putative bacteriophage related protein	Putative uncharacterized protein	Putative phage protein	

ECOLI01109	Tail fiber assembly protein homolog from lambdoid prophage e14	Putative uncharacterized protein	Lambdoid prophage e14 tail fiber assembly protein -like protein	putative tail fiber assembly protein	Phage tail assembly chaperone gp38	Tail fiber assembly protein	Tail assembly chaperone gp38	Tail fiber assembly protein	Tail fiber assembly protein homolog	Putative tail fiber chaperone (Assembly protein); e14 prophage	Putative tail fiber chaperone (Assembly protein); e14 prophage	Predicted tail fibre assembly protein	Ybl49 protein	Tail fiber assembly protein	putative tail fiber assembly Prophage ECO103_P13	E14 prophage; predicted tail fiber assembly protein	Putative phage tail fibre assembly protein	

ECOLI01110	Putative protein stfE	Putative bacteriophage tail fiber protein	Similar to tail fiber protein from lambdoid prophage	Putative bacteriophage tail fiber protein	Bacteriophage tail fiber protein	Bacteriophage tail fiber protein	putative tail fiber protein	Tail collar domain protein	Tail Collar domain protein	Tail collar domain protein	pseudo	Similar to tail fiber protein from lambdoid prophage	Tail Collar domain protein	putative bacteriophage tail fiber protein	Putative bacteriophage tail fiber protein	
ECOLI01111	DNA-invertase from lambdoid prophage e14	Invertase/recombinase protein	Site-specific recombinase	Site-specific recombinase	Site-specific recombinase, resolvase family	Probable resolvase	TnSon_1 resolvase, TnpR_TnSon_1	DNA invertase from prophage CP-933H	SCD19.06, probable DNA invertase, len: 170 aa; similar to SW:DNIV_BPP1 (EMBL:X01828) Bacteriophage P1 DNA-invertase (site-specific recombinase) Cin, 186 aa; fasta scores: opt: 471 z-score: 560.8 E(): 9.9e-24; 48.8% identity in 170 aa overlap. Contains Pfam match to entry PF00239 recombinase, Site-specific recombinases putative DNA invertase	Residues 1 to 153 of 153 are 94 pct identical to residues 6 to 158 of a 196 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_285972.1 DNA invertase from prophage CP-933H	Site-specific recombinase	Putative resolvase	conserved gene transposase (resolvase, DNA invertase)	COG1961 putative transposase	resolvase/integrase-like protein	Similar to Escherichia coli Min SWALL:Q05517 (EMBL:X62121) (190 aa) fasta scores: E(): 7.7e-28, 51.61% id in 186 aa, and to Salmonella typhimurium DNA-invertase Hin or STM2772 SWALL:HIN_SALTY (SWALL:P03013) (190 aa) fasta scores: E(): 5.2e-27, 46.59% id in 191 aa putative resolvase/DNA invertase	Fels-2 prophage protein	invertase/recombinase protein	resolvase	Resolvase-like	Code: L; COG: COG1961 inversion of adjacent DNA; at locus of e14 element	resolvase identified by match to protein family HMM PF00239; match to protein family HMM PF02796	Resolvase-like	Site-specific recombinase	phage DNA-invertase	Resolvase-like	Code: L; COG: COG1961 DNA-invertase	Resolvase	Resolvase-like	

ECOLI01113	pseudo	isocitrate dehydrogenase in e14 prophage, specific for NADP+	Isocitrate dehydrogenase	Putative uncharacterized protein	pseudo	
ECOLI01115	Uncharacterized protein ycgX	Hypothetical protein ycgX	putative cytoplasmic protein	Putative cytoplasmic protein	Code: R; COG: COG5562 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ycgX	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ycgX	Putative uncharacterized protein ycgX	Putative uncharacterized protein ycgX	Putative uncharacterized protein ycgX	Putative uncharacterized protein ycgX	Predicted protein	Putative uncharacterized protein ycgX	
ECOLI01116	Uncharacterized HTH-type transcriptional regulator ycgE	Hypothetical transcriptional regulator ycgE	Transcriptional regulator, MerR family	Code: K; COG: COG0789 putative transcriptional regulator	Hypothetical transcriptional regulator YcgE	Hypothetical transcriptional regulator YcgE	Transcriptional regulator, MerR family	putative transcriptional regulator, MerR family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	putative transcriptional regulator	Transcriptional regulator, MerR family	Transcriptional regulator, MerR family	Putative transcriptional regulator, MerR family	Putative bacterial regulatory protein, MerR	Transcriptional regulator mlrA homolog	transcriptional regulator, MerR family PFAM: regulatory protein MerR KEGG: pen:PSEEN0882 transcriptional regulator, MerR family	Transcriptional regulator, MerR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator mlrA	Transcriptional regulator, MerR family	Transcriptional regulator mlrA	regulatory protein MerR PFAM: regulatory protein MerR; cobalamin B12-binding domain protein KEGG: rrs:RoseRS_2116 regulatory protein, MerR	Transcriptional regulator mlrA	HTH-type transcriptional regulator MlrA	Transcriptional regulator MlrA	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	
ECOLI01117	Uncharacterized protein ycgF	Putative uncharacterized protein	response regulator receiver modulated diguanylate phosphodiesterase	Putative uncharacterized protein ycgF	conserved hypothetical protein	Putative uncharacterized protein	Diguanylate phosphodiesterase	Putative uncharacterized protein	BLUF domain/cyclic diguanylate phosphodiesterase (EAL) domain protein	Predicted FAD-binding phosphodiesterase	BLUF domain/cyclic diguanylate phosphodiesterase (EAL) domain protein	Diguanylate phosphodiesterase	BLUF domain/cyclic diguanylate phosphodiesterase (EAL) domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ycgF	BLUF domain/cyclic diguanylate phosphodiesterase (EAL) domain protein	Putative uncharacterized protein	Putative cyclic-di-GMP phosphodiesterase; blue- light sensing protein using FAD	Putative cyclic-di-GMP phosphodiesterase; blue- light sensing protein using FAD	Putative cyclic-di-GMP phosphodiesterase; blue- light sensing protein using FAD	Putative cyclic-di-GMP phosphodiesterase; blue- light sensing protein using FAD	Putative cyclic-di-GMP phosphodiesterase; blue- light sensing protein using FAD	Predicted FAD-binding phosphodiesterase	Putative cyclic-di-GMP phosphodiesterase; blue- light sensing protein using FAD	YcgF protein	Predicted FAD-binding phosphodiesterase	predicted FAD-binding phosphodiesterase	
ECOLI01118	Uncharacterized protein ycgZ	Putative uncharacterized protein	Putative uncharacterized protein ycgZ	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein ycgZ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ycgZ	Putative uncharacterized protein ycgZ	Putative uncharacterized protein ycgZ	Putative uncharacterized protein ycgZ	Putative uncharacterized protein ycgZ	Predicted protein	Putative uncharacterized protein ycgZ	YcgZ protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01120	Regulatory protein ariR	Regulatory protein ariR	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ymgB	Putative uncharacterized protein ymgB	Putative uncharacterized protein ymgB	Putative uncharacterized protein ymgB	Putative uncharacterized protein ymgB	Predicted protein	Putative uncharacterized protein ymgB	YmgB protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01121	Uncharacterized protein ymgC	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ymgC	Putative uncharacterized protein ymgC	Putative uncharacterized protein ymgC	Putative uncharacterized protein ymgC	Putative uncharacterized protein ymgC	Predicted protein	Putative uncharacterized protein ymgC	YmgC protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein ymgC	
ECOLI01122	Uncharacterized protein ycgG	Putative rtn protein	Putative uncharacterized protein VPA0594	Residues 60 to 578 of 578 are 98 pct identical to residues 3 to 521 of a 521 aa protein from Escherichia coli K12 ref: NP_415686.1 putative proteases	IPR000209: Peptidase S8, subtilase serine protease; IPR001633: EAL domain putative Diguanylate cyclase/phosphodiesterase domain 1	similar to Salmonella typhi CT18 putative rtn protein putative rtn protein	sensory transduction protein kinase	Putative diguanylate cyclase/phosphodiesterase domain 1	Putative exported protein precursor	putative membrane protein	conserved hypothetical protein	Diguanylate phosphodiesterase precursor	Diguanylate phosphodiesterase precursor	PFAM: EAL domain protein KEGG: swi:Swit_2925 EAL domain protein EAL domain protein	Putative protease	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Diguanylate phosphodiesterase	Conserved inner membrane protein	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Diguanylate phosphodiesterase	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative rtn protein	Putative rtn protein	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Sensory transduction protein kinase	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Putative rtn protein	
ECOLI01123	Uncharacterized protein ymgF	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Predicted protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein ymgF	Putative uncharacterized protein ymgF	Putative uncharacterized protein ymgF	Putative uncharacterized protein ymgF	Predicted protein	Putative uncharacterized protein ymgF	YmgF protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein ymgF	
ECOLI01124	pseudo	Autotransporter	Residues 431 to 749 of 773 are 96 pct identical to residues 5 to 323 of a 338 aa protein from Escherichia coli K12 ref: NP_415688.1 orf, partial conserved hypothetical protein	Putative autotransporter protein	Outer membrane autotransporter barrel	autotransporter start codon not provided Similar to the C-terminal regions of several autotransporters	Putative autotransporter protein precursor	Autotransporter protein precursor	conserved hypothetical protein	Autotransporter protein precursor	Autotransporter	Outer membrane autotransporter barrel domain precursor	Putative autotransporter protein precursor	pseudo	Porin, autotransporter (AT) family	Outer membrane autotransporter barrel domain protein precursor	Outer membrane autotransporter barrel domain protein	Putative autotransporter protein	Outer membrane autotransporter barrel domain protein	Putative autotransporter	Putative Outer membrane autotransporter barrel, putative pectin lyase fold	Putative Outer membrane autotransporter barrel, putative pectin lyase fold	Putative Outer membrane autotransporter barrel, putative pectin lyase fold	Putative outer membrane autotransporter, pertactin domain protein	putative autotransporter protein	Autotransporter protein	AidA-I adhesin-like protein	outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; KEGG: bcj:BCAL3353 putative outer membrane autotransporter	
ECOLI01124	pseudo	Autotransporter	Residues 431 to 749 of 773 are 96 pct identical to residues 5 to 323 of a 338 aa protein from Escherichia coli K12 ref: NP_415688.1 orf, partial conserved hypothetical protein	Putative autotransporter protein	Outer membrane autotransporter barrel	autotransporter start codon not provided Similar to the C-terminal regions of several autotransporters	Putative autotransporter protein precursor	Autotransporter protein precursor	conserved hypothetical protein	Autotransporter protein precursor	Autotransporter	Outer membrane autotransporter barrel domain precursor	Putative autotransporter protein precursor	pseudo	Porin, autotransporter (AT) family	Outer membrane autotransporter barrel domain protein precursor	Outer membrane autotransporter barrel domain protein	Putative autotransporter protein	Outer membrane autotransporter barrel domain protein	Putative autotransporter	Putative Outer membrane autotransporter barrel, putative pectin lyase fold	Putative Outer membrane autotransporter barrel, putative pectin lyase fold	Putative Outer membrane autotransporter barrel, putative pectin lyase fold	Putative outer membrane autotransporter, pertactin domain protein	putative autotransporter protein	Autotransporter protein	AidA-I adhesin-like protein	outer membrane autotransporter barrel domain protein TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; KEGG: bcj:BCAL3353 putative outer membrane autotransporter	
ECOLI01125	Uncharacterized protein ymgD	Residues 1 to 111 of 111 are 100 pct identical to residues 1 to 111 of a 111 aa protein from Escherichia coli K12 ref: NP_415689.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ymgD	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ymgD	Putative uncharacterized protein ymgD	Putative uncharacterized protein ymgD	Putative uncharacterized protein ymgD	Putative uncharacterized protein ymgD	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein ymgD	YmgD protein	Putative uncharacterized protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI01126	Uncharacterized protein ymgG	Residues 1 to 114 of 114 are 99 pct identical to residues 1 to 114 of a 114 aa protein from Escherichia coli dbj: BAA36006.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	UPF0757 protein ymgG	UPF0757 protein ymgG	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Conserved domain protein	Predicted protein	Conserved domain protein	Putative uncharacterized protein	Conserved domain protein	Putative uncharacterized protein	Conserved domain protein	Putative uncharacterized protein	Putative uncharacterized protein ymgG	Putative uncharacterized protein ymgG	Putative uncharacterized protein ymgG	Putative uncharacterized protein ymgG	Putative uncharacterized protein ymgG	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein ymgG	YmgG protein	UPF0757 protein ymgG	UPF0757 protein ymgG	conserved predicted protein	
ECOLI02567	Uncharacterized outer membrane protein ypjA	some similarities with sp|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase, hypothetical start	Surface protein	no similarity,;	Putative uncharacterized protein	Putative uncharacterized protein	Outer membrane protein B	Autotransporter	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL PROTEIN	Putative ATP-binding component of a transport system	serine proteinase	Outer membrane protein B	hypothetical protein	Mb1485c, PE_PGRS27, len: 1408 aa. Similar to Rv1450c, len: 1329 aa, from Mycobacterium tuberculosis strain H37Rv, (92.1% identity in 1417 aa overlap). Member of the Mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins, similar to Y03A_MYCTU|Q10637 hypothetical glycine-rich 49.6 kd protein (603 aa), fasta scores: opt: 2112, E(): 0, (56.5% identity in 630 aa overlap).  REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, insertions of 27 bp, 207 bp and 27 bp, substitutions of 60 bp to 63 bp and 11 bp, and a 27 bp deletion, leads to a longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (1408 aa versus 1329 aa). PE-PGRS FAMILY PROTEIN	Hemagglutinin/hemolysin-related protein	Putative pertactin family virulence factor/autotransporter	identified by match to protein family HMM PF01833; match to protein family HMM PF03797; match to protein family HMM PF05345; match to protein family HMM TIGR01414 outer membrane autotransporter barrel domain protein	Hemolysin-type calcium-binding protein	putative serine protease autotransporter	perilipin 4 [Source:HGNC Symbol;Acc:29393]	pseudo surface expressed Ser-Thr rich repeat protein	transcript_id=ENSOCUT00000005237	Hemolysin-type calcium-binding region	Outer membrane autotransporter barrel	Outer membrane autotransporter barrel	Hemolysin-type calcium-binding region	transcript_id=ENSFCAT00000007710	secreted protein containing hyalin domain	
ECOLI01130	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	putative cell division topological specificity factor	Cell division topological specificity factor	identified by match to PFAM protein family HMM PF03776 cell division topological specificity factor MinE	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Product confidence : putative Gene name confidence : putative putative cell division inhibitor protein	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	Cell division topological specificity factor	cell division topological specificity factor MinE	
ECOLI01131	Septum site-determining protein minD	Cell division inhibitor MinD	Septum site-determining protein	Septum site-determining protein minD	Septum site-determining protein	Cell division inhibitor	245aa long hypothetical cell division inhibitor MinD	Septum site-determining protein MinD	Putative septum site-determining protein MinD	Walker type ATPase	Putative septum site-determining protein MinD	Septum site-determining protein	Septum site-determining protein minD	Cell division inhibitor MinD	Septum site-determining protein minD	Septum formation inhibitor-activating ATPase	Septum site-determining protein	Cell division inhibitor minD	Cell division inhibitor	Septum site determining protein	Septum site-determining protein	Septum site-determining protein MinD	Probable septum site-determining protein	MinD protein	Cell division inhibitor MinD	Septum site-determining protein; cell division inhibitor	Septum site-determining protein	putative septum site-determining protein MinD	Septum site-determining protein minD	
ECOLI01132	Septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Septum site-determining protein minC	Probable septum site-determining protein	putative septum site-determining protein MinC	Septum site-determining protein minC	identified by match to PFAM protein family HMM PF03775 septum site-determining protein MinC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Product confidence : putative Gene name confidence : putative putative cell division inhibitor protein	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Septum site-determining protein minC	Probable septum site-determining protein minC	Probable septum site-determining protein minC	Residues 6 to 236 of 236 are 98 pct identical to residues 1 to 231 of a 231 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287415.1 cell division inhibitor, inhibits ftsZ ring formation	Septum site-determining protein minC	Probable septum site-determining protein minC	
ECOLI01133	Uncharacterized protein ycgJ	Hypothetical protein ycgJ	Prophage protein, putative	Putative uncharacterized protein ycgJ	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Fels-1 prophage identified by match to protein family HMM PF05666	Putative uncharacterized protein	Putative uncharacterized protein ycgJ	Fels-1 prophage precursor	conserved hypothetical protein	Putative prophage protein	Putative prophage protein	Putative fels-1 Prophage Protein	Fels-1 Propage domain protein	Putative prophage protein	Predicted protein	Putative fels-1 Prophage Protein	Fels-1 Propage domain protein precursor	Putative fels-1 Prophage Protein	Putative prophage protein	Putative uncharacterized protein	Putative prophage protein	Putative prophage protein	Putative fels-1 Prophage Protein	Putative uncharacterized protein	Putative fels-1 Prophage Protein	
ECOLI01134	Uncharacterized protein ycgK	Putative uncharacterized protein ycgK	Gifsy-1 prophage protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Protein YcgK	Protein YcgK	conserved hypothetical protein identified by similarity to SP:P76002	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Bacterial pre-peptidase C-terminal domain	Predicted protein	Bacterial pre-peptidase C-terminal domain protein	Peptidase domain protein precursor	Bacterial pre-peptidase C-terminal domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Bacterial pre-peptidase C-domain protein	Bacterial pre-peptidase C-terminal domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ycgK	Putative uncharacterized protein ycgK	Putative uncharacterized protein ycgK	Putative uncharacterized protein ycgK	Putative uncharacterized protein ycgK	
ECOLI01135	Uncharacterized protein ycgL	UPF0745 protein HI1446	UPF0745 protein PM0444	UPF0745 protein PA1295	Putative uncharacterized protein VV1058	UPF0745 protein ycgL	Conserved hypothetical protein	Protein ycgL	UPF0745 protein VC_1957	Putative uncharacterized protein	UPF0745 protein ECA2367	UPF0745 protein PSPTO_3921	UPF0745 protein VP0875	UPF0745 protein ycgL	UPF0745 protein VV1_0131	Residues 1 to 108 of 108 are 99 pct identical to residues 1 to 108 of a 108 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287418.1 orf, conserved hypothetical protein	UPF0745 protein YPO2080/y2231/YP_1923	UPF0745 protein plu2139	IPR007840: Protein of unknown function DUF709 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0745 protein XAC4085	UPF0745 protein YPTB2062	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	protein YcgL	Similar to: HI1446, YCGL_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	UPF0745 protein PP_4590	Uncharacterized conserved secreted protein	UPF0745 protein ycgL	
ECOLI01136	Uncharacterized protein ycgM	Uncharacterized hydrolase C21C3.09c [Source:GeneDB_Spombe;Acc:SPBC21C3.09c]	Fumarylacetoacetate hydrolase family protein	highly similar to uniprot|P53889 Saccharomyces cerevisiae YNL168c;	Putative uncharacterized protein	Putative hydrolase	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase	Putative uncharacterized protein	Protein ycgM	go_component: mitochondrion [goid 0005739] mitochondrion protein, putative	Fumarylacetoacetate hydrolase family protein	Fumarylacetoacetate hydrolase family protein	Fumarylacetoacetate hydrolase family protein	Putative isomerase	BH1071 protein	Residues 1 to 219 of 219 are 99 pct identical to residues 1 to 219 of a 219 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287419.1 putative isomerase	Putative fumarylacetoacetate hydrolase family protein	Similar to putative isomerase YcgM of Escherichia coli	Probable isomerase	putative Fumarylacetoacetate (FAA) hydrolase family	similar to Salmonella typhi CT18 putative hydrolase putative hydrolase	Putative fumarylacetoacetate hydrolase family protein	Similar to Porphyromonas gingivalis W83 fumarylacetoacetate hydrolase family protein PG0025 SWALL:AAQ65280 (EMBL:AE017172) (219 aa) fasta scores: E(): 2.2e-45, 60% id in 220 aa, and to Escherichia coli protein YcgM or B1180 SWALL:YCGM_ECOLI (SWALL:P76004) (219 aa) fasta scores: E(): 1.1e-25, 39.21% id in 204 aa putative hydrolase	Fumarylacetoacetate hydrolase family protein	Putative fumarylacetoacetate (FAA) hydrolase family protein	go_component: mitochondrion [goid 0005739]; go_function: catalytic activity [goid 0003824]; go_process: metabolism [goid 0008152] fumarylacetoacetate hydrolase family protein	identified by match to protein family HMM PF01557 fumarylacetoacetate hydrolase family protein	identified by match to protein family HMM PF01557 fumarylacetoacetate hydrolase family protein	
ECOLI01137	UPF0260 protein ycgN	UPF0260 protein HI1355	UPF0260 protein CC_3276	UPF0260 protein PM0539	UPF0260 protein PA1299	UPF0260 protein VV2402	UPF0260 protein Atu0932	UPF0260 protein ycgN	conserved hypothetical protein	UPF0260 protein ycgN	identified by Glimmer2; putative conserved hypothetical protein	UPF0260 protein VC_1058	UPF0260 protein SO_2573	UPF0260 protein ECA2365	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	UPF0260 protein PSPTO_3918	UPF0260 protein BMEI0534	UPF0260 protein VP2169	UPF0260 protein ycgN	hypothetical protein	Putative uncharacterized protein	UPF0260 protein VV1_2014	hypothetical protein	Residues 1 to 153 of 153 are 100 pct identical to residues 6 to 158 of a 158 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287420.1 orf, conserved hypothetical protein	UPF0260 protein YPO2083/y2228/YP_1926	UPF0260 protein plu2141	identified by similarity to SP:O68068; match to protein family HMM PF05779 conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	
ECOLI01138	Hemolysin E, chromosomal	Hemolysin E	similar to Salmonella typhi Ty2 haemolysin HlyE haemolysin HlyE	Hemolysin E	Silent hemolysin SheA	Haemolysin HlyE	Silent hemolysin SheA	Hemolysin E, chromosomal	Hemolysin E	Hemolysin E	Hemolysin E	Hemolysin E	
ECOLI01139	Protein umuD	Polymerase V subunit	Putative uncharacterized protein	Putative SOS mutagenesis protein UmuD	Putative SOS mutagenesis protein UmuD	UmuD protein	UmuD protein	UmuD protein	LexA repressor protein	Protein umuD	Probable SOS mutagenesis and repair protein UmuD	Residues 1 to 139 of 139 are 100 pct identical to residues 1 to 139 of a 139 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287422.1 SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC	SOS mutagenesis	UmuD ortholog, peptidase family S24	IPR006197: Peptidase S24 error-prone repair: SOS-response transcriptional repressors (LexA homologs, RecA-mediated autopeptidases)	similar to Salmonella typhi CT18 UmuD protein UmuD protein	putative SOS mutagenesis protein UmuD	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme component of DNA polymerase V	Protein umuD	DNA repair protein	similar to COG1974: SOS-response transcriptional repressors (RecA-mediated autopeptidases) hypothetical protein	identified by similarity to GB:AAG39350.1; match to protein family HMM PF00717 ultraviolet light resistance protein RulA, putative	identified by match to protein family HMM PF00717 ultraviolet light resistance protein A	SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC; Code: KT; COG: COG1974 UmuD	identified by match to protein family HMM PF00717; match to protein family HMM PF01726; match to protein family HMM TIGR00498 LexA repressor	SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC; Code: KT; COG: COG1974 UmuD	putative SOS mutagenesis protein UmuD	Putative SOS mutagenesis protein UmuD	putative prophage repressor	
ECOLI01140	Protein umuC	Polymerase V subunit	Putative UmuC protein	UmuC protein	ImpB/mucB/samB family protein	Lmo2676 protein	SOS mutagenesis and repair protein UmuC homolog	DNA-damage repair protein	hypothetical protein involved in DNA repair	UmuC protein	UmuC protein	UmuC protein	SOS mutagenesis and repair	Putative SOS mutagenesis and repair protein UmuC	Lin2823 protein	Residues 1 to 422 of 422 are 99 pct identical to residues 1 to 422 of a 422 aa protein from Escherichia coli O157:H7 ref: NP_309706.1 UmuC protein	similar to DNA repair proteins UmuC hypothetical protein	conserved gene SOS mutagenesis and repair UmuC protein	ImpB/MucB/SamB family protein	DNA polymerase V	UmuC protein	Nucleotidyltransferase/DNA polymerase	IPR001126: UMUC-like DNA-repair protein error-prone repair: component of DNA polymerase V with UmuD'	similar to Salmonella typhi CT18 UmuC protein UmuC protein	putative UmuC protein	identified by match to protein family HMM PF00817 ImpB/MucB/SamB family protein	Similar to Escherichia coli DNA repair protein RumB(r391) SWALL:Q44054 (EMBL:U13633) (422 aa) fasta scores: E(): 9e-65, 45.43% id in 416 aa, and to Providencia rettgeri RumB SWALL:Q8RL27 (EMBL:AY090559) (435 aa) fasta scores: E(): 9.3e-65, 45.43% id in 416 aa, and to Salmonella typhimurium ImpB protein SWALL:BAB91614 (EMBL:AP005147) (424 aa) fasta scores: E(): 4.8e-60, 43.09% id in 413 aa putative RumB/ImpB like DNA repair protein	Protein umuC	DNA repair protein	
ECOLI01141	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B 2	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	putative disulfide bond formation protein B(Disulfide oxidoreductase)	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	Residues 1 to 178 of 178 are 99 pct identical to residues 1 to 178 of a 178 aa protein from Escherichia coli pir: A48288 disulfide bond formation protein dsbB	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	Disulfide bond formation protein B	Similar to disulfide bond formation protein DsbB hypothetical protein	Similar to disulfide bond formation protein DsbB hypothetical protein	Disulfide bond formation protein B	putative disulfide oxidoreductase, reoxidizes DsbA protein	similar to Salmonella typhi CT18 disulfide bond formation protein B disulfide bond formation protein B	Disulfide bond formation protein B	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type m : membrane component disulfide bond formation protein (Disulfide oxidoreductase)	Disulfide bond formation protein B	
ECOLI01142	Na(+)/H(+) antiporter nhaB	Na(+)/H(+) antiporter nhaB	Na(+)/H(+) antiporter nhaB	Na+/H+-exchanging protein	Na(+)/H(+) antiporter nhaB	putative Na+/H+-exchanging protein	Na(+)/H(+) antiporter 2	Na(+)/H(+) antiporter nhaB	Na+/H+ antiporter	Na(+)/H(+) antiporter nhaB	Na(+)/H(+) antiporter nhaB	Na(+)/H(+) antiporter nhaB	Na(+)/H(+) antiporter nhaB	Residues 19 to 531 of 531 are 99 pct identical to residues 1 to 513 of a 513 aa protein from Escherichia coli O157:H7 ref: NP_309708.1 Na+-H+ antiporter NhaB	Na(+)/H(+) antiporter nhaB	Na(+)/H(+) antiporter nhaB	ArsA	Uncharacterized transporter Rv2685/MT2759	Mb2704, arsB1, len: 428 aa. Equivalent to Rv2685, len: 428 aa, from Mycobacterium tuberculosis strain H37Rv, (99.5% identity in 428 aa overlap). Probable arsB1, arsenic-transport integral membrane protein, equivalent to P46838|AG45_MYCLE|ML1036 46 KDA PROBABLE INTEGRAL MEMBRANE PROTEIN (antigen 45, a transmembrane protein related to arsenical pumps) from Mycobacterium leprae (429 aa), FASTA scores: opt: 2048, E(): 7.3e-120, (74.25% identity in 427 aa overlap); and downstream ORF O07186|YQ84_MYCTU|ARSA|Rv2684|MT2758|MTCY05A6.05 PROBABLE INTEGRAL MEMBRANE PROTEIN ARSA from Mycobacterium tuberculosis (429 aa), FASTA scores: opt: 2154, E(): 1.9e-126, (76.8% identity in 427 aa overlap). Also highly similar to other proteins e.g. O59575|PH1912 HYPOTHETICAL 46.0 KDA PROTEIN from Pyrococcus horikoshii (424 aa), FASTA scores: opt: 1075, E(): 1.9e-59, (43.55% identity in 427 aa overlap); Q9UY19|PAB1107 TRANSPORT PROTEIN from Pyrococcus abyssi (425 aa), FASTA scores: opt: 1062, E(): 1.3e-58, (41.8% identity in 428 aa overlap); Q9KDI2|BH1231 HYPOTHETICAL 46.0 KDA PROTEIN from Bacillus halodurans (428 aa), FASTA scores: opt: 993, E(): 2.4e-54, (39.55% identity in 430 aa overlap); etc. BELONGS TO THE NADC/P/PHO87 FAMILY OF TRANSPORTERS, P SUBFAMILY. Note that previously known as arsB. PROBABLE ARSENIC-TRANSPORT INTEGRAL MEMBRANE PROTEIN ARSB1	IPR001991: Sodium:dicarboxylate symporter NhaB family of transport protein, Na+/H+ antiporter, regulator of intracellular pH	similar to Salmonella typhi CT18 regulator of intracellular pH; Na+/H+ antiporter regulator of intracellular pH; Na+/H+ antiporter	Na(+)/H(+) antiporter nhaB	Na(+)/H(+) antiporter NhaB	Sodium/proton antiporter 2; Similar to: HI0427, NHAB_HAEIN Na(+)/H(+) antiporter 2	Na+/H+ antiporter NhaB protein	Na(+)/H(+) antiporter nhaB	Na(+)/H(+) antiporter nhaB	Na+/H+ antiporter protein	identified by match to protein family HMM PF06450 sodium-proton antiporter NhaB	
ECOLI01143	Fatty acid metabolism regulator protein	Fatty acid metabolism regulator protein	Fatty acid metabolism regulator protein	Fatty acid metabolism regulator protein	putative fatty acid metabolism regulatorprotein	Fatty acid metabolism regulator protein	Fatty acid metabolism regulator protein	Fatty acid metabolism regulator protein	Fatty acid metabolism regulator protein	Putative transcriptional regulator	Fatty acid metabolism regulator protein	Fatty acid metabolism regulator protein	Fatty acid metabolism regulator protein	Residues 9 to 247 of 247 are 100 pct identical to residues 1 to 239 of a 239 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287426.1 negative regulator for fad regulon, and positive activator of fabA	Fatty acid metabolism regulator protein	Fatty acid metabolism regulator protein	Putative uncharacterized protein	IPR000524: Bacterial regulatory protein, GntR family negative regulator for fad regulon and positive activator of fabA (GntR family)	similar to Salmonella typhi CT18 fatty acid-fatty acyl responsive DNA-binding protein fatty acid-fatty acyl responsive DNA-binding protein	Fatty acid metabolism regulator protein	fatty acid metabolism regulator protein	Similar to: HI0426, FADR_HAEIN fatty acid metabolism regulator protein	Transcriptional regulators FadR protein	Negative regulator for fad regulon	Fatty acid metabolism regulator protein	identified by similarity to SP:P09371; match to protein family HMM PF00392; match to protein family HMM PF07840 fatty acid metabolism regulator protein	fatty acid metabolism regulator protein	Code: K; COG: COG2186 negative regulator for fad regulon, and positive activator of fabA	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2843809, 1569108, 9388199, 11279025; Product type r : regulator fatty acid metabolism regulator protein	
ECOLI01144	Uncharacterized protein ycgB	SpoVR-like family protein	Stage V sporulation protein R	Putative uncharacterized protein	Putative uncharacterized protein VV2351	Putative uncharacterized protein STY1933	Stage V sporulation protein R	Stage V sporulation protein R	Stage V sporulation protein R	Putative uncharacterized protein	Conserved hypothetical protein	Putative sporulation protein R	Hypothetical protein ycgB	identified by similarity to SP:P37875; match to protein family HMM PF04293 stage V sporulation protein R	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	SpoVR like family protein	Putative uncharacterized protein	Putative uncharacterized protein VP0985	Putative sporulation protein	CDS_ID OB2646 stage V sporulation protein R	hypothetical protein	Stage V sporulation protein R	Involved in spore cortex synthesis	Putative uncharacterized protein	
ECOLI01145	D-amino acid dehydrogenase small subunit	Oxidoreductase, putative	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase 1 small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase small subunit	hypothetical glycine/D-amino acid oxidase	D-amino acid dehydrogenase small subunit	similar to GP:15160086, GB:X12534, SP:P10114, PID:35861, and PID:412184; identified by sequence similarity; putative D-alanine dehydrogenase, small subunit	D-amino acid dehydrogenase small subunit	pseudo	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase, small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase, small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase, small subunit	D-amino acid dehydrogenase small subunit	Residues 3 to 434 of 434 are 99 pct identical to residues 1 to 432 of a 432 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287428.1 D-amino acid dehydrogenase subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase 1 small subunit	D-amino acid dehydrogenase small subunit	D-amino acid dehydrogenase small subunit	
ECOLI01146	Alanine racemase, catabolic	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase, catabolic	Alanine racemase	Alanine racemase, catabolic	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase, catabolic	alanine racemase	Alanine racemase	Alanine racemase	Residues 1 to 356 of 356 are 99 pct identical to residues 1 to 356 of a 356 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287429.1 alanine racemase 2, catabolic	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492 alanine racemase	Alanine racemase 1	Alanine racemase	identified by similarity to SP:P10725; match to protein family HMM PF00842; match to protein family HMM PF01168 alanine racemase	Alanine racemase	IPR000821: Alanine racemase alanine racemase 2, catabolic	
ECOLI01147	Cell volume regulation protein A	Putative sodium/proton antiporter	Na(+)/H(+) antiporter	Probable Na+/H+ antiporter	Cell volume regulation protein A homolog	Putative Na(+)/H(+) exchanger	Cell volume regulation protein A	Cell volume regulation protein A	Cell volume regulation protein A homolog	Cell volume regulation protein A homolog	Cell volume regulation protein A homolog	Sodium/hydrogen antiporter	Cell volume regulation protein A homolog	Cell volume regulation protein A	Possible Na+/H+ antiporter	Na+/H+ antiporter	Sodium/hydrogen antiporter	Residues 1 to 578 of 578 are 98 pct identical to residues 1 to 578 of a 578 aa protein YCGO_ECOLI sp: P76007 putative NA(+)-H(+) exchanger YcgO	B1191 protein	putative CPA1 family, Na:H transport protein	similar to Salmonella typhi CT18 putative Na+/H+ exchanger putative Na+/H+ exchanger	Cell volume regulation protein A	putative Na+/H+ antiporter, CPA1 family	Cell volume regulation protein A homolog	NhaP-type Na+/H+ antiporter	Cell volume regulation protein A	identified by match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF03471 sodium/hydrogen exchanger family protein	identified by match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF03471 sodium/hydrogen exchanger family protein	Transporter-associated region:TrkA-C:Sodium/hydrogen exchanger	
ECOLI01148	Muramoyltetrapeptide carboxypeptidase	Putative uncharacterized protein Ta0234	Muramoyltetrapeptide carboxypeptidase	Putative uncharacterized protein	Putative uncharacterized protein CPE2458	Microcin C7 self-immunity protein-like protein	Putative uncharacterized protein	Putative uncharacterized protein STY1928	Lmo1638 protein	Muramoyl-tetrapeptide carboxypeptidase	Putative uncharacterized protein	Microcin C7 self-immunity protein	Muramoyltetrapeptide carboxypeptidase	Muramoyl-tetrapeptide carboxypeptidase	Muramoyltetrapeptide carboxypeptidase	Muramoyltetrapeptide carboxypeptidase	Putative carboxypeptidase TP_0688	Muramoyltetrapeptide carboxypeptidase	Muramoyltetrapeptide carboxypeptidase	Putative uncharacterized protein	Murein tetrapeptide carboxypeptidase	MccF-like protein	Lin1679 protein	Residues 5 to 298 of 298 are 97 pct identical to residues 11 to 304 of a 304 aa protein from Escherichia coli K12 ref: NP_415710.1 orf, conserved hypothetical protein	Probable transmembrane protein	Microcin C7 self-immunity protein mccF	Uncharacterized protein	carboxypeptidase	Putative uncharacterized protein yrgH	
ECOLI01149	Endotype membrane-bound lytic murein transglycosylase A	Membrane-bound lytic murein transglycosylase E	Endo-type membrane-bound lytic murein transglycosylase A	Residues 28 to 219 of 219 are 100 pct identical to residues 50 to 241 of a 241 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287432.1 murein transglycosylase E	Putative membrane-bound lytic murein transglycosylase	Similar to membrane-bound lytic murein transglycosylase E	IPR000189: Prokaryotic transglycosylase, active site membrane-bound lytic murein transglycosylase E	similar to Salmonella typhi Ty2 membrane-bound lytic murein transglycosylase E membrane-bound lytic murein transglycosylase E	Putative membrane-bound lytic murein transglycosylase	membrane-bound lytic murein transglycosylase C precursor	Membrane-bound lytic murein transglycosylase E	Endo-type membrane-bound lytic murein transglycosylase A	ortholog to Escherichia coli bnum: b1193; MultiFun: Cell structure 6.1, 6.2; Metabolism 1.6.7 membrane-bound lytic murein transglycosylase E	Code: M; COG: COG0741 murein transglycosylase E	Code: M; COG: COG0741 murein transglycosylase E	Code: M; COG: COG0741 murein transglycosylase E	Endo-type membrane-bound lytic murein transglycosylase A	Putative membrane-bound lytic murein transglycosylase precursor	Endo-type membrane-bound lytic murein transglycosylase A	Membrane-bound lytic murein transglycosylase precursor	Putative membrane-bound lytic murein transglycosylase precursor	murein transglycosylase E Code: M; COG: COG0741	Membrane-bound lytic murein transglycosylase precursor	murein transglycosylase E	Endotype membrane-bound lytic murein transglycosylase A precursor	Endotype membrane-bound lytic murein transglycosylase A precursor	Putative uncharacterized protein	Membrane-bound lytic murein transglycosylase E	Lytic transglycosylase catalytic precursor	
ECOLI01150	Uncharacterized protein ycgR	Putative uncharacterized protein	Hypothetical protein ycgR	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ycgR	Residues 1 to 244 of 244 are 98 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli K12 ref: NP_415712.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	putative inner membrane protein	Putative uncharacterized protein	Putative inner membrane protein	YcgR	YcgR	Code: M; COG: COG5581 conserved hypothetical protein	Code: M; COG: COG5581 conserved hypothetical protein	YcgR	YcgR family protein	Code: M; COG: COG5581; orf conserved hypothetical protein	YcgR	YcgR protein superfamily identified by match to protein family HMM PF07317	Putative uncharacterized protein	Hypothetical protein	YcgR	Putative uncharacterized protein ycgR	YcgR family protein PFAM: type IV pilus assembly PilZ; YcgR family protein KEGG: bur:Bcep18194_A6362 YcgR family protein	Hypothetical protein	YcgR family protein PFAM: type IV pilus assembly PilZ; YcgR family protein KEGG: bcn:Bcen_2402 YcgR	
ECOLI01151	UPF0410 protein ymge	Transglycosylase associated protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Transglycosylase associated protein	Putative uncharacterized protein	Putative uncharacterized protein ymgE	Residues 12 to 95 of 95 are 97 pct identical to residues 1 to 84 of a 84 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287436.1 orf, conserved hypothetical protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark transglycosylase associated protein	putative transglycosylase-associated protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	COG2261 transglycosylase associated protein	Putative transglycosylase-associated protein	transglycosylase associated protein	Code: S; COG: COG2261 transglycosylase associated protein	Code: S; COG: COG2261 conserved hypothetical protein	Transglycosylase-associated protein	hypothetical protein	Code: S; COG: COG2261; orf conserved hypothetical protein	Transglycosylase-associated protein	Transglycosylase associated protein	transglycosylase associated protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Transglycosylase associated protein	transglycosylase associated protein COG2261 Predicted membrane protein	Transglycosylase-associated protein PFAM: Transglycosylase-associated protein KEGG: bur:Bcep18194_A4121 transglycosylase-associated protein	Transglycosylase-associated protein PFAM: Transglycosylase-associated protein KEGG: bcn:Bcen_0533 transglycosylase-associated protein	Transglycosylase associated protein family identified by match to protein family HMM PF04226	conserved hypothetical protein Code: S; COG: COG2261	
ECOLI01152	Uncharacterized protein ycgY	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ycgY	Putative uncharacterized protein ycgY	YcgY protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI01153	Periplasmic trehalase	Periplasmic trehalase	Periplasmic trehalase	Hypothetical conserved protein	Putative periplasmic trehalase	Putative trehalase	Periplasmic trehalase precursor	Trehalase	Putative periplasmic trehalase	Residues 1 to 515 of 515 are 99 pct identical to residues 51 to 565 of a 565 aa protein from Escherichia coli K12 ref: NP_415715.1 trehalase, periplasmic	Periplasmic trehalase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark trehalase, periplasmic	Putative uncharacterized protein TTHA0978	IPR001661: Glycoside hydrolase, family 37 trehalase, periplasmic	similar to Salmonella typhimurium trehalase, periplasmic trehalase, periplasmic	Periplasmic trehalase	Periplasmic trehalase	periplasmic trehalase	periplasmic trehalase	Alpha,alpha-trehalase	Code: G; COG: COG1626 trehalase, periplasmic	Alpha,alpha-trehalase precursor	Periplasmatic alpha,alpha-trehalase precursor	trehalase identified by match to protein family HMM PF01204	Periplasmic trehalase	trehalase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker periplasmic	Periplasmic trehalase	
ECOLI01154	PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM	Putative PTS system enzyme I	Residues 2 to 474 of 474 are 98 pct identical to residues 1 to 473 of a 473 aa protein from Escherichia coli K12 ref: NP_415716.1 putative PTS system enzyme I	Code: G; COG: COG1080 putative PTS system enzyme I	Putative PTS system enzyme I	Putative uncharacterized protein ycgC	Multifunctional PTS-system sugar transferase	putative PTS system enzyme I	putative phosphoenolpyruvate kinase (PTS system EI component in bacteria) YcgC	Putative PTS hybrid protein	PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM	Dihydroxyacetone kinase, phosphotransfer subunit	Fused predicted dihydroxyacetone-specific PTS enzymes: HPr component; EI component	PTS-dependent dihydroxyacetone kinase	Dihydroxyacetone kinase, phosphotransfer subunit	PTS-dependent dihydroxyacetone kinase, DhaM subunit	Putative uncharacterized protein	PTS-dependent dihydroxyacetone kinase, DhaM subunit	PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit	PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM	Putative PTS system enzyme I	Fused dihydroxyacetone-specific PTS enzymes: HPr component ; EI component	Fused dihydroxyacetone-specific PTS enzymes: HPr component ; EI component	Fused dihydroxyacetone-specific PTS enzymes: HPr component ; EI component	Fused dihydroxyacetone-specific PTS enzymes: HPr component ; EI component	Fused dihydroxyacetone-specific PTS enzymes: HPr component ; EI component	Fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component	Fused dihydroxyacetone-specific PTS enzymes: HPr component ; EI component	DhaH protein	
ECOLI01155	PTS-dependent dihydroxyacetone kinase, ADP- binding subunit dhaL	Dihydroxyacetone kinase	Putative dihydroxyacetone kinase subunit 2	Dihydroxyacetone kinase family protein	Putative kinase	putative dihydroxyacetone kinase	Protein ycgS	DAK2 domain protein	Dihydroxyacetone kinase	Dihydroxyacetone kinase family protein	Conserved protein with phosphatase domain of diacylglycerol kinase	Dihydroxyacetone kinase	Putative dihydroxyacetone kinase	Putative dihydroxyacetone kinase sununit	Putative dihydroxyacetone kinase	CDS_ID OB2473 hypothetical protein	DAK2 domain protein	Dihydroxyacetone kinase	BH3396 protein	SC4G1.38c, hypothetical protein, len: 199 aa; similar to SW:YCGS_ECOLI (EMBL:AE000218) Escherichia coli hypothetical 22.6 kDa protein in TreA-Pth intergenic region YcgS, 210 aa; fasta scores: opt: 349 z-score: 387.3 E(): 4.2e-14; 44.5% identity in 200 aa overlap and to C-terminal region of SW:DAK1_YEAST (EMBL:Z38114) Saccharomyces cerevisiae dihydroxyacetone kinase 1 (EC 2.7.1.29) Dak1, 584 aa; fasta scores: opt: 298 z-score: 326.4 E(): 1e-10; 33.3% identity in 189 aa overlap conserved hypothetical protein	Dihydroxyacetone kinase	Residues 2 to 236 of 236 are 99 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli dbj: BAA36056.1 orf, conserved hypothetical protein	Dihydroxyacetone kinase	Putative uncharacterized protein	Dihydroxyacetone kinase, phosphatase domain dak2	identified by match to protein family HMM PF02734 DAK2 domain protein	Dihydroxyacetone kinase	Hypothetical protein SE0237	Glycerone kinase	
ECOLI01156	PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK	Dihydroxyacetone kinase	Putative dihydroxyacetone kinase subunit 1	Dihydroxyacetone kinase family protein	Dihydroxyacetone kinase family protein	Lmo2695 protein	Dihydroxyacetone kinase	Dihydroxyacetone kinase	putative dihydroxyacetone kinase	Hypothetical protein ycgT	identified by match to protein family HMM PF02733 dihydroxyacetone kinase family protein	DAK1 domain protein	Dihydroxyacetone kinase	Conserved protein with kinase domain of diacylglycerol kinase	Dihydroxyacetone kinase	Putative dihydroxyacetone kinase	Putative dihydroxyacetone kinase sununit	Putative dihydroxyacetone kinase	CDS_ID OB2474 dihydroxyacetone kinase	hypothetical protein	Dihydroxyacetone kinase	Dihydroxyacetone kinase	SC4G1.39c, hypothetical protein, len: 330 aa; similar to SW:YCGT_ECOLI (EMBL:AE000218) Escherichia coli hypothetical 39.5 kDa protein in TreA-Pth intergenic region YcgT, 366 aa; fasta scores: opt: 876 z-score: 955.5 E(): 0; 46.2% identity in 355 aa overlap, to N-terminal region of SW:DAK1_YEAST (EMBL:Z38114) Saccharomyces cerevisiae dihydroxyacetone kinase 1 (EC 2.7.1.29) Dak1, 584 aa; fasta scores: opt: 516 z-score: 562.8 E(): 7e-24; 34.0% identity in 312 aa overlap and to TR:AAK84068 (EMBL:AF297121) Selenomonas ruminantium subsp. ruminantium dihydroxyacetone kinase DhaK1, 329 aa; fasta scores: opt: 1017 Z-score: 1086.8 E(): 6.7e-53; 49.848% identity in 329 aa overlap conserved hypothetical protein	Dihydroxyacetone kinase	Lin2843 protein	Residues 1 to 356 of 356 are 98 pct identical to residues 11 to 366 of a 366 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287447.1 putative dihydroxyacetone kinase	Similar to dihydroxyacetone kinase	Glycerone kinase	identified by match to protein family HMM PF02733 dihydroxyacetone kinase family protein	
ECOLI01157	PTS-dependent dihydroxyacetone kinase operon regulatory protein	Probable transcriptional regulator	Glycerol metabolism operon Regulatory protein	NtrC family transcriptional regulator	Transcriptional regulator	NtrC family Transcriptional regulator, ATPase domain protein	Residues 1 to 642 of 642 are 99 pct identical to residues 1 to 642 of a 642 aa protein from Escherichia coli K12 ref: NP_415719.1 putative sensor-type regulator	Similar to C-terminal region of formate hydrogenlyase transcriptional activator	InterProMatches:IPR002197, IPR000014; involved in the control of isoleucine and valine utilization as sole nitrogen sources (bkd operon), Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165) transcriptional regulator (sigma-L-dependent)	sigma-L-dependent transcriptional regulator	Sigma-54 dependent transcriptional regulator	identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF02954; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199 sigma-54 dependent transcriptional regulator	Putative two component response regulator	Evidence 2b : Function of strongly homologous gene; PubMedId : 12426353; Product type r : regulator putative Sigma-54 dependent transcriptional regulator/sensory box protein	Code: QK; COG: COG3284 putative sensor-type regulator	sigma54 specific transcriptional regulator with GAF sensor, Fis family	Glycerol metabolism operon regulatory protein	phosphocarrier HPr/sensory box protein/sigma-54 dependent transcriptional regulator identified by match to protein family HMM PF00158; match to protein family HMM PF00381; match to protein family HMM PF00989; match to protein family HMM PF02954; match to protein family HMM TIGR00229	Hypothetical protein	hypothetical protein similarity to COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains(Evalue: 3E-69)	sigma-54 dependent transcriptional regulator/sensory box protein identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF02954; match to protein family HMM TIGR00229	Glycerol metabolism operon regulatory protein	transcriptional regulator with sigma 54 interaction domain	GAF modulated sigma54 specific transcriptional regulator, Fis family	PTS-dependent dihydroxyacetone kinase operon regulatory protein identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02954	transcriptional regulator, Fis family PFAM: helix-turn-helix, Fis-type; GAF domain protein KEGG: fra:Francci3_2510 putative transcriptional regulator, fis family	Glycerol metabolism operon regulatory protein	Dihydroxyacetone kinase operon regulator	putative sigma-54 interacting regulatory protein	
ECOLI01158	Uncharacterized protein ycgV	pseudo	pseudo	hypothetical protein	Residues 1 to 955 of 955 are 98 pct identical to residues 1 to 955 of a 955 aa protein from Escherichia coli K12 ref: NP_415720.1 putative adhesion and penetration protein	Probable ATP-binding component of a transport system	IPR000694: Proline-rich region; IPR004899: Pertactin domain; IPR005546: Autotransporter beta-domain;IPR006315: Outer membrane autotransporter barrel putative autotransported protein	similar to Salmonella typhimurium putative autotransported protein putative autotransported protein	Putative autotransported protein	identified by match to protein family HMM PF03212; match to protein family HMM PF03797; match to protein family HMM TIGR01414 outer membrane autotransporter, putative	Code: MU; COG: COG3468 putative ATP-binding component of a transport system	Putative autotransporter	putative adhesion and penetration protein	Outer membrane autotransporter barrel domain protein precursor	Putative outer membrane autotransporter	Outer membrane autotransporter barrel domain protein precursor	Predicted adhesin	Putative outer membrane autotransporter	Outer membrane autotransporter barrel domain protein	Putative uncharacterized protein	Outer membrane autotransporter barrel domain protein precursor	Putative autotransported protein	Outer membrane autotransporter barrel domain	Putative autotransported protein	Outer membrane autotransporter barrel domain	Putative autotransported protein	Putative autotransporter	Putative adhesin; putative autotransporter	Putative adhesin; putative autotransporter	

ECOLI01159	GTP-dependent nucleic acid-binding protein engD	GTP-binding protein	Uncharacterized GTP-binding protein UNK4.13c [Source:GeneDB_Spombe;Acc:SPACUNK4.13c]	similar to sp|P38746 Saccharomyces cerevisiae YHL014c YLF2, start by similarity	GTP-binding protein	GTP binding protein YchF	GTP-binding protein	Sll0245 protein	GTP-binding protein	Probable GTP-binding protein MG024	Probable GTP-binding protein MG024 homolog	GTP-dependent nucleic acid-binding protein engD	identified by match to PFAM protein family HMM PF01018 GTP-binding protein, YchF family	GTP-binding protein	GTP-binding protein	Putative GTP binding protein	Widely conserved hypothetical GTPase-like protein	Putative uncharacterized protein	Probable GTP-binding protein	Probable GTP-binding protein	Probable GTP-binding protein	GTP-binding protein, GTP1/OBG family	GTP-binding protein, YchF family	Probable GTP-binding protein	Putative GTP-binding protein	GTP-dependent nucleic acid-binding protein engD	Putative uncharacterized protein	Putative GTP-binding protein	Putative uncharacterized protein	
ECOLI01160	Peptidyl-tRNA hydrolase	One of two (see also PTH2) mitochondrially-localized peptidyl-tRNA hydrolases; dispensable for respiratory growth on rich medium, but required for respiratory growth on minimal medium. [Source:SGD;Acc:S000001232]	Peptidyl-tRNA hydrolase	Probable peptidyl-tRNA hydrolase [Source:GeneDB_Spombe;Acc:SPBC2D10.15c]	weakly similar to sp|P38876 Saccharomyces cerevisiae YHR189w singleton, start by similarity	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	similar to uniprot|P38876 Saccharomyces cerevisiae YHR189w;	similar to GB:X56071, PID:507063,  and SP:P51603; identified by sequence similarity; putative peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase	
ECOLI01161	Uncharacterized protein ychH	Hypothetical protein ychH	Putative membrane protein	Uncharacterized protein ychH	Residues 1 to 92 of 92 are 98 pct identical to residues 1 to 92 of a 92 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287451.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to probable membrane protein YchH of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YchH	Putative membrane protein precursor	Putative uncharacterized protein ychH	Membrane protein precursor	Putative membrane protein precursor	conserved hypothetical protein	Membrane protein precursor	putative inner membrane protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ychH	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted inner membrane protein	Putative membrane protein	
ECOLI01162	Putative sulfate transporter ychM	Sulfate transporter family protein	Probable sulfate permease	Sulfate transporter family/STAS domain protein	Putative uncharacterized protein	Putative sulphate transporter	Probable sulfate permease	Lmo0897 protein	Sulfate permease and related transporters	Putative sulfate transporter permease	hypothetical sulfate permease family protein	Putative sulfate transporter ychM	Sulfate transporter family protein	Sulfate permease family protein	Sulfate permease family protein	Putative sulfate transporter	Putative sulfate transporter	Sulfate permease family protein	Putative sulfate transporter	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN	Low affinity sulphate transporter 3	Putative sulfate transporter	SULFATE TRANSPORTER SULFATE TRANSPORTER FAMILY PROTEIN	Sulfate permease family protein	Putative sulfate transporter ychM	similar to AF210249-11|AAG02352.1| percent identity: 46 in 537 aa putative transport protein	sulfate transporter family protein	Sulfate transporter family protein	Lin0896 protein	
ECOLI01163	Ribose-phosphate pyrophosphokinase	ribose-phosphate pyrophosphokinase 3;	highly similar to sp|P38689 Saccharomyces cerevisiae YHL011c PRS3 ribose-phosphate pyrophosphokinase, start by similarity	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase 3 [Source:GeneDB_Spombe;Acc:SPCC1620.06c]	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	phosphoribosylpyrophosphate synthetase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase	Phosphoribosyltransferase:Purine/pyrimidine phosphoribosyl transferase	Ribose-phosphate pyrophosphokinase	hypothetical ribose-phosphate pyrophosphokinase	
ECOLI01164	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	putative kinase, GHMP family	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	
ECOLI01165	Outer-membrane lipoprotein lolB	Outer-membrane lipoprotein lolB	Outer-membrane lipoprotein lolB	Outer-membrane lipoprotein lolB precursor	Outer-membrane lipoprotein lolB	Putative lipoprotein	hypothetical outer membrane lipoprotein LolB	Outer-membrane lipoprotein lolB precursor	Outer-membrane lipoprotein lolB	Outer-membrane lipoprotein lolB precursor	Outer-membrane lipoprotein lolB	Outer-membrane lipoprotein lolB	Lipoprotein, putative	Outer-membrane lipoprotein lolB	Outer-membrane lipoprotein lolB	Outer-membrane lipoprotein lolB	Outer-membrane lipoprotein lolB	Residues 1 to 207 of 207 are 100 pct identical to residues 1 to 207 of a 207 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287455.1 an enzyme in main pathway of synthesis of 5-aminolevulinate, possibly glutamyl-tRNA dehydrogenase	Outer-membrane lipoprotein lolB	Outer-membrane lipoprotein lolB	HemM protein	Outer-membrane lipoprotein lolB	similar to putative outer membrane lipoproteins hypothetical protein	conserved gene outer membrane lipoprotein LolB	similar to putative outer membrane lipoproteins hypothetical protein	Outer-membrane lipoprotein lolB	outer membrane lipoprotein	similar to Salmonella typhi Ty2 outer membrane lipoprotein outer membrane lipoprotein	Outer-membrane lipoprotein lolB	
ECOLI01166	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	hypothetical glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	Glutamyl-tRNA reductase	
ECOLI01167	Peptide chain release factor 1	peptide chain release factor 1, mitochondrial precursor;	Mitochondrial translation release factor, involved in stop codon recognition and hydrolysis of the peptidyl- tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability.  [Source:SGD;Acc:S000003111]	similar to sp|P41767 Kluyveromyces lactis MRF-1 Peptide chain release factor 1, mitochondrial precursor, hypothetical start	Peptide chain release factor 1	Putative peptide chain release factor 1, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC2F7.17]	gi|1172907|sp|P41767|RF1M_KLULA Kluyveromyces lactis Peptide chain release factor 1, mitochondrial precursor (MRF-1), start by similarity	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	similar to uniprot|P30775 Saccharomyces cerevisiae YGL143c MRF1 peptide chain release factor;	DEHA2G17204p;similar to uniprot|P30775 Saccharomyces cerevisiae YGL143C MRF1 Mitochondrial polypeptide chain release factor involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation;	similar to GB:D14012, SP:Q04756, PID:1217636,  and PID:219681; identified by sequence similarity; putative peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	Peptide chain release factor 1	
ECOLI01168	Protein methyltransferase hemK	Methyltransferase	Modification methylase, HemK family	Protein hemK homolog	Protein hemK homolog	Protoporphyrinogen oxidase	Protein hemK homolog	HemK protein	Putative modification methyltransferase	Protein hemK homolog	Possible protoporphyrinogen oxidase	Protoporphyrinogen oxidase	Putative uncharacterized protein hemK	HemK protein	HemK family protein	HemK protein	Protein hemK homolog	Probable methyl transferase	Putative DNA methylase	Methylase of polypeptide chain release factor	HemK protein	Protoporphyrinogen oxidase HemK	Protoporphyrinogen oxidase	HemK protein	Protoporphyrinogen oxidase	Protein-(Glutamine-N5) methyltransferase, release factor-specific	Related to HemK methylase	Lmo2542 protein	Putative protoporphyrinogen oxidase	
ECOLI01169	Protein sirB2	Putative uncharacterized protein VV0933	Protein sirB2	conserved hypothetical protein	Protein sirB2	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein VP0745	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 130 of 130 are 99 pct identical to residues 1 to 130 of a 130 aa protein from Escherichia coli K12 ref: NP_415731.1 orf, conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Regulation of invasion genes	similar to Salmonella typhi CT18 putative regulator putative regulator	Putative membrane protein	Putative regulator	transcriptional regulator	Uncharacterized conserved membrane protein	Protein sirB2	predicted Invasion gene expression up-regulator, SirB	identified by match to protein family HMM PF04247 SirB family protein	Invasion gene expression up-regulator, SirB	Best Blastp Hit: pir||A81163 conserved hypothetical protein NMB0746 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7225975|gb|AAF41159.1| (AE002429) conserved hypothetical protein [Neisseria meningitidis MC58] conserved hypothetical protein	Code: S; COG: COG3094 conserved hypothetical protein	Invasion gene expression up-regulator, SirB	Code: S; COG: COG3094 conserved hypothetical protein	putative membrane protein	
ECOLI01170	Protein sirB1	Putative uncharacterized protein	UPF0162 protein HI1558	UPF0162 protein PM0557	UPF0162 protein PA3419	Uncharacterized conserved protein	Protein sirB1	Alr0024 protein	Putative uncharacterized protein	hypothetical protein	Protein sirB1	UPF0162 protein VC_2176	Putative uncharacterized protein	Putative regulator	UPF0162 protein BUsg_167	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein VP0746	Protein sirB1	UPF0162 protein BU173	Putative uncharacterized protein	Residues 1 to 269 of 269 are 99 pct identical to residues 1 to 269 of a 269 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287460.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Hypothetical the tetratrico peptide repeat containing protein	Similar to unknown protein YchA of Escherichia coli	UPF0162 protein XF_1494	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR000504: RNA-binding region RNP-1 (RNA recognition motif) putative transcriptional regulator	similar to Salmonella typhi CT18 putative regulator putative regulator	
ECOLI01171	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	putative 2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	Residues 1 to 284 of 284 are 100 pct identical to residues 1 to 284 of a 284 aa protein from Escherichia coli K12 ref: NP_415733.1 2-dehydro-3-deoxyphosphooctulonate aldolase	2-dehydro-3-deoxyphosphooctonate aldolase	KdsA protein	
ECOLI01174	Calcium/proton antiporter	Putative ionic transporter integral membrane protein	Putative CaCA family calcium/proton exchanger	Calcium/proton antiporter	Putative calcium/proton antiporter	Probable calcium/proton antiporter	Ca2+/H+ antiporter	Putative antiporter	Putative ionic antiporter	Probable Ca2+/H+ antiporter ChaA	Calcium/proton antiporter	Putative calcium/proton antiporter	Calcium/proton antiporter	Putative calcium/proton antiporter	pseudo	Putative transporter	Calcium/proton exchanger	Sodium-calcium/proton antiporter	probable ionictransporter	Calcium/proton antiporter	SCC54.22c, probable ionic transporter, len: 366 aa; similar to many egs. TR:O53910 (EMBL:AL022001) putative ionic transporter from Mycobacterium tuberculosis (360 aa) fasta scores; opt: 1466, z-score: 1650.6, E(): 0, (69.4% identity in 356 aa overlap) and SW:CHAA_ECOLI ChaA, calcium/proton antiporter from Escherichia coli (366 aa) fasta scores; opt: 668, z-score: 756.2, E(): 0, (34.7% identity in 352 aa overlap). Contains several probable membrane spanning hydrophobic regions. ionic transporter	Ca2+/H+ antiporter	Residues 1 to 366 of 366 are 99 pct identical to residues 1 to 366 of a 366 aa protein from Escherichia coli K12 ref: NP_415734.1 sodium-calcium-proton antiporter	Calcium/proton antiporter	Calcium/proton antiporter	ChaA	Cation/proton antiporter	Mb1633, chaA, len: 360 aa. Equivalent to Rv1607, len: 360 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 360 aa overlap). Probable chaA, ionic transporter integral membrane protein, putative calcium/proton antiporter, similar to many e.g.  P31801|CHAA_ECOLI CALCIUM/PROTON ANTIPORTER from Escherichia coli (366 aa), FASTA scores: opt: 736, E(): 0, (35.9% identity in 351 aa overlap). Equivalent to Mycobacterium leprae AL049913|MLCB1610_21 (77.7% identity in 364 aa overlap). SEEMS TO BELONG TO THE CaCA FAMILY. Probable ionic transporter integral membrane protein chaA	CaCA family, sodium-calcium/proton antiporter	
ECOLI01175	Cation transport regulator chaB	Putative cation transport regulator	Cation transport regulator ChaB	Cation transport regulator chaB	Cation transport regulator chaB	Putative cation transport regulator	Residues 1 to 76 of 76 are 100 pct identical to residues 1 to 76 of a 76 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287465.1 cation transport regulator	cation transport regulator	Similar to Q8XGJ2 Cation transport regulator ChaB from Salmonella typhi (76 aa). FASTA: opt: 267 Z-score: 394.9 E(): 4.2e-14 Smith-Waterman score: 267; 54.412 identity in 68 aa overlap. cation transport regulator	Cation transport regulator	Cation transport regulator ChaB	Code: R; COG: COG4572 cation transport regulator	putative cation transport regulator	Putative cation transport regulato, ChaB	Code: R; COG: COG4572 cation transport regulator	ChaB	putative cation transport regulator ChaB	Cation transport regulator ChaB	putative cation transport regulator COG4572	Code: R; COG: COG4572 cation transport regulator	Cation transport regulator ChaB	ChaB PFAM: ChaB KEGG: rfe:RF_1086 cation transport regulator ChaB	ChaB	ChaB	cation transport regulator Similar to Q8XGJ2 Cation transport regulator ChaB from Salmonella typhi (76 aa). FASTA: opt: 267 Z-score: 394.9 E(): 4.2e-14 Smith-Waterman score: 267; 54.412 identity in 68 aa overlap.	ChaB	Cation transport regulator	ChaB family protein PFAM: ChaB family protein KEGG: nmu:Nmul_A2443 ChaB	Cation transport regulator	
ECOLI01176	Cation transport protein chaC	weakly similar to sp|P32656 Saccharomyces cerevisiae YER163c unknown function, hypothetical start	Cation transport regulator-like protein [Source:GeneDB_Spombe;Acc:SPBC31F10.03]	Cation transport protein chaC	Putative cation transport protein	Cation transport regulator	Residues 1 to 225 of 225 are 99 pct identical to residues 7 to 231 of a 231 aa protein CHAC_ECOLI sp: P39163 cation transport protein ChaC	, predicted protein, len = 238 aa, unknown; predicted pI = 5.4061 hypothetical protein, conserved	hypothetical protein, conserved	ChaC-like protein	Code: P; COG: COG3703 cation transport regulator	ChaC-like protein	Code: P; COG: COG3703 cation transport regulator	ChaC-like protein	cation transport regulator ChaC	transcript_id=ENSOCUT00000010760	ChaC-like protein	ChaC-like protein	transcript_id=ENSDNOT00000017531	Code: P; COG: COG3703 cation transport regulator	putative cation transport protein ChaC Codons 50 to 245 are similar to codons 40 to 232 of Escherichia coli cation transport protein ChaC SWALL:CHAC_ECOLI (SWALL:P39163) (231 aa), and to Rhizobium loti mll1647 protein SWALL:Q98K42 (EMBL:AP002997) (248 aa) similarity:fasta; SWALL:CHAC_ECOLI (SWALL:P39163); Escherichia coli; cation transport protein ChaC; length 231 aa; 181 aa overlap; query 52-231 aa; subject 28-206 aa similarity:fasta; SWALL:Q98K42 (EMBL:AP002997); Rhizobium loti; mll1647 protein; length 248 aa; 231 aa overlap; query 24-254 aa; subject 8-238 aa	transcript_id=ENSETET00000018149	ChaC-like protein PFAM: ChaC-like protein: (1.1e-58) KEGG: sil:SPO3173 cation transport protein ChaC, putative, ev=3e-69, 72% identity	hypothetical conserved protein Similar to mll1647 [Mesorhizobium loti]. Related to cation transport protein chaC (c1678 ) [Escherichia coliCFT073] Similar to swissprot:Q98K42 Putative location:bacterial inner membrane Psort-Score: 0.0019	Cation transport protein ChaC	Cation transport protein ChaC	transcript_id=ENSEEUT00000015008	transcript_id=ENSOGAT00000010334	
ECOLI01177	Protein ychN	Uncharacterized protein MK0008	Intracellular sulfur reduction related protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved hypothetical protein	Hypothetical protein ychN	DsrE-related protein	Protein ychN	Residues 1 to 117 of 117 are 100 pct identical to residues 1 to 117 of a 117 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287467.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative ACR involved in intracellular sulfur reduction	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein ychN	Uncharacterized ACR involved in intracellular sulfur reduction DsrE protein	Putative ACR protein	DsrE-like protein	Code: P; COG: COG1553 conserved hypothetical protein	Code: P; COG: COG1553 conserved hypothetical protein	Code: P; COG: COG1553; orf conserved hypothetical protein	Putative ACR involved in intracellular sulfur reduction	DsrE family protein	Hypothetical protein	Putative uncharacterized protein ychN	DsrE-like protein	DsrE-like protein	Hypothetical protein	DsrE/DsrF-like family identified by match to protein family HMM PF02635	DsrE family protein PFAM: DsrE family protein KEGG: ppr:PBPRB1553 putative uncharacterized protein involved in oxidation of intracellular sulfur	
ECOLI01178	Uncharacterized protein ychO	Hypothetical protein ychP	Putative uncharacterized protein ychP	Residues 48 to 464 of 464 are 99 pct identical to residues 1 to 417 of a 417 aa protein from Escherichia coli K12 ref: NP_415738.1 putative factor	putative invasin	similar to Salmonella typhi CT18 putative invasin putative invasin	Putative invasin	putative factor	putative factor	Putative uncharacterized protein	Putative uncharacterized protein ychP	putative factor	conserved hypothetical protein	Putative invasin precursor	Conserved protein, invasin-like protein	Putative uncharacterized protein	Intimin/invasin family protein	Putative invasin precursor	Predicted invasin	Intimin/invasin family protein	Putative factor precursor	Putative invasin	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative invasin	Putative invasin	Putative invasin	Putative uncharacterized protein	
ECOLI01179	Nitrate/nitrite response regulator protein narL	Nitrate/nitrite response regulator protein narL	Nitrate/nitrite response regulator	putative transcriptional regulatory protein, former trsD; hypothetical chloroplast RF29 tctD homolog	Nitrate/nitrite response regulator protein narL	Residues 1 to 238 of 238 are 100 pct identical to residues 17 to 254 of a 254 aa protein from Escherichia coli emb: CAA33023.1 NarL	CheY subfamily two-component response regulator	Two-component response regulator, CheY-like receiver and wHTH DNA-binding domains	IPR000792: Bacterial regulatory protein, LuxR family; IPR001789: Response regulator receiver response regulator in two-component regulatory system with NarX (or NarQ), regulates anaerobic respiration and fermentation (LuxR/UhpA familiy)	similar to Salmonella typhi CT18 nitrate/nitrite response regulator protein NarL nitrate/nitrite response regulator protein NarL	Nitrate/nitrite response regulator (CheY, HTH domain)	Response regulator in two-component regulatory system with NarX	Code: TK; COG: COG2197 pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes	response regulator for nar, frd, dms and tor genes; Code: TK; COG: COG2197 pleiotrophic regulation of anaerobic respiration	pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes; Code: TK; COG: COG2197 NarL	Nitrate/nitrite response regulator protein NarL	Two component transcriptional regulator, LuxR family	NarL transcriptional dual regulator	two component transcriptional regulator, LuxR family PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2 KEGG: sdy:SDY_1275 NarL	response regulator receiver protein PFAM: response regulator receiver KEGG: sat:SYN_02214 response regulator with sigma 54 interaction domain	Nitrate/nitrite response regulator protein narL Code: TK; COG: COG2197	Two component transcriptional regulator, LuxR family	nitrate/nitrite response regulator protein NarL	Two component transcriptional regulator, LuxR family	Two component transcriptional regulator, LuxR family	Two-component response regulator	Pleiotrophic regulation of anaerobic respiration	Putative uncharacterized protein	Nitrate/nitrite response regulator protein NarL	
ECOLI01180	Nitrate/nitrite sensor protein narX	Nitrate/nitrite sensor protein NarX	Nitrate/nitrite sensor protein narX	Nitrate/nitrite sensor kinase	Nitrate/nitrite sensor protein narX	Residues 1 to 598 of 598 are 100 pct identical to residues 1 to 598 of a 598 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287470.1 nitrate-nitrate sensor, histidine protein kinase acts on NarL regulator	Nitrate/nitrite sensor protein	IPR003660: Histidine kinase, HAMP region; IPR005467: Histidine kinase sensory histidine kinase in two component regulatory system with NarL, senses nitrate/nitrite, regulates anaerobic respiration and fermentation	similar to Salmonella typhi CT18 nitrate/nitrite sensor protein NarX nitrate/nitrite sensor protein NarX	Nitrate/nitrite sensor protein	Nitrate/nitrite sensor histidine kinase	Sensory histidine kinase in two component regulatory system with NarL	Code: T; COG: COG3850 nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator	nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator; Code: T; COG: COG3850 NarX	Periplasmic Sensor Signal Transduction Histidine Kinase	periplasmic sensor signal transduction histidine kinase	Signal transduction histidine kinase, nitrate/nitrite-specific COG3850	histidine protein kinase acts on NarL regulator; Code: T; COG: COG3850 nitrate/nitrate sensor	Nitrate/nitrite sensor protein NarX	Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ	Nitrate/nitrite sensor protein precursor	Nitrate/nitrite sensor protein NarX	integral membrane sensor signal transduction histidine kinase PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region KEGG: eca:ECA2029 nitrate/nitrite sensor kinase	Nitrate/nitrite sensor protein precursor	Two-component sensor NarX	putative nitrate/nitrite sensor protein; NarX	nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator; Code: T; COG: COG3850	Nitrate/nitrite sensor protein precursor	Histidine kinase, dimerisation and phosphoacceptor region	

ECOLI01181	Nitrite extrusion protein 1	Nitrite extrusion protein	Nitrite extrusion protein 1	Nitrite extrusion protein	Residues 3 to 465 of 465 are 99 pct identical to residues 1 to 463 of a 463 aa protein from Escherichia coli K12 ref: NP_415741.1 nitrite extrusion protein	Nitrite extrusion protein	MFS superfamily, nitrite extrusion protein	similar to Salmonella typhi CT18 nitrite extrusion protein (nitrite facilitator) nitrite extrusion protein (nitrite facilitator)	Nitrate/nitrite transporter	MFS superfamily nitrite extrusion protein	Code: P; COG: COG2223 nitrite extrusion protein	Code: P; COG: COG2223 nitrite extrusion protein	Code: P; COG: COG2223 nitrite extrusion protein	Nitrite extrusion protein	Nitrite transporter precursor	Nitrite extrusion protein	Major facilitator superfamily MFS_1	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: nfa:nfa45650 putative nitrite extrusion protein	nitrite extrusion protein Code: P; COG: COG2223	Nitrite transporter precursor	nitrate/nitrite transporter NarK	Nitrate/nitrite transporter, MFS family	Nitrite transporter	Nitrite extrusion protein	Putative uncharacterized protein	Nitrite extrusion protein 1	Nitrite transporter	Nitrite transporter	Nitrite transporter	
ECOLI01182	Respiratory nitrate reductase 1 alpha chain	Respiratory nitrate reductase 1 alpha chain	Respiratory nitrate reductase 1 alpha chain	Respiratory nitrate reductase 1 alpha chain	Nitrate reductase, alpha subunit	Nitrate reductase 1, alpha subunit	Residues 1 to 1247 of 1247 are 99 pct identical to residues 1 to 1247 of a 1247 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287472.1 nitrate reductase 1, alpha subunit	Probable respiratory nitrate reductase alpha chain oxidoreductase protein	Nitrate reductase, alpha chain	Respiratory nitrate reductase alpha chain	InterProMatches:IPR006468; Molecular Function: nitrate reductase activity (GO:0008940), Cellular Component: nitrate reductase complex (GO:0009325), Biological Process: nitrate metabolism (GO:0042126) nitrate reductase (alpha subunit)	IPR001005: Myb DNA-binding domain; IPR006655: Prokaryotic molybdopterin oxidoreductase nitrate reductase 1, alpha subunit	similar to Salmonella typhi CT18 respiratory nitrate reductase 1 alpha chain respiratory nitrate reductase 1 alpha chain	Nitrate reductase 1, alpha subunit	Nitrate reductase, alpha subunit	Code: C; COG: COG5013 nitrate reductase 1, alpha subunit	Code: C; COG: COG5013 nitrate reductase 1 alpha subunit	nitrate reductase, alpha subunit	Code: C; COG: COG5013 nitrate reductase 1, alpha subunit	Respiratory nitrate reductase 1 alpha chain	Nitrate reductase, alpha subunit	nitrate reductase, alpha subunit	Respiratory nitrate reductase 1 alpha chain	nitrate reductase, alpha subunit TIGRFAM: nitrate reductase, alpha subunit PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region KEGG: eca:ECA2031 respiratory nitrate reductase 1 alpha chain	nitrate reductase 1, alpha subunit Code: C; COG: COG5013	Nitrate reductase, alpha subunit	nitrate reductase 1, alpha subunit	Nitrate reductase 1, alpha subunit	Respiratory nitrate reductase alpha subunit apoprotein	
ECOLI01183	Respiratory nitrate reductase 1 beta chain	Respiratory nitrate reductase 1 beta chain	Respiratory nitrate reductase 1 beta chain	Respiratory nitrate reductase 1 beta chain	Nitrate reductase 1, beta subunit	Residues 1 to 512 of 512 are 99 pct identical to residues 1 to 512 of a 512 aa protein from Escherichia coli K12 ref: NP_415743.1 nitrate reductase 1, beta subunit	Nitrate reductase beta chain	Nitrate reductase, beta chain	IPR000345: Cytochrome c heme-binding site nitrate reductase 1, FeS (beta) subunit	similar to Salmonella typhi CT18 respiratory nitrate reductase 1 beta chain respiratory nitrate reductase 1 beta chain	nitrate reductase beta chain narH	Ortholog of S. aureus MRSA252 (BX571856) SAR2485 nitrate reductase beta chain	nitrate reductase beta chain narH	Nitrate reductase 1, FeS (Beta) subunit	Similar to Bacillus subtilis nitrate reductase beta chain NarH SW:NARH_BACSU (P42176) (487 aa) fasta scores: E(): 5.3e-142, 66.94% id in 484 aa, and to Staphylococcus carnosus putative nitrate reductase beta chain NarH TR:Q9ZIF7 (EMBL:AF029224) (525 aa) fasta scores: E(): 1.5e-187, 83.61% id in 525 aa nitrate reductase beta chain	Code: C; COG: COG1140 nitrate reductase 1, beta subunit	identified by similarity to EGAD:16236; similarity to EGAD:30703; match to protein family HMM TIGR01660 respiratory nitrate reductase, beta subunit	Code: C; COG: COG1140 nitrate reductase 1 beta subunit	respiratory nitrate reductase, beta subunit identified by match to protein family HMM TIGR01660	nitrate reductase beta chain	Code: C; COG: COG1140 nitrate reductase 1, beta subunit	Respiratory nitrate reductase 1 beta chain	Nitrate reductase, beta subunit	nitrate reductase, beta subunit	Respiratory nitrate reductase 1 beta chain	nitrate reductase, beta subunit TIGRFAM: nitrate reductase, beta subunit KEGG: mpa:MAP2619c nitrate reductase beta chain	nitrate reductase 1, beta subunit Code: C; COG: COG1140	Nitrate reductase, beta subunit	Nitrate reductase, beta subunit precursor	
ECOLI01184	Respiratory nitrate reductase 1 delta chain	Respiratory nitrate reductase 1 delta chain	Nitrate reductase molybdenum cofactor assembly chaperone	Respiratory nitrate reductase delta chain	Putative respiratory nitrate reductase subunit	Respiratory nitrate reductase 1 delta chain	Respiratory nitrate reductase 1 delta chain	Putative nitrate reductase delta subunit	Putative nitrate reductase delta chain	Respiratory nitrate reductase 1 delta chain	Residues 1 to 236 of 236 are 97 pct identical to residues 1 to 236 of a 236 aa protein from Escherichia coli O157:H7 ref: NP_309758.1 nitrate reductase 1 delta subunit	NarJ	PROBABLE RESPIRATORY NITRATE REDUCTASE (DELTA CHAIN) NARJ	Mb1195, narJ, len: 201 aa. Equivalent to Rv1163, len: 201 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 201 aa overlap). Probable narJ, respiratory nitrate reductase delta chain (EC 1.7.99.4).  Similar to others e.g. P42178|NARJ_BACSU NITRATE REDUCTASE DELTA CHAIN from Bacillus subtilis (184 aa), FASTA scores: opt: 254, E(): 1.9e-10, (31.8% identity in 179 aa overlap); etc. Strong similarity to region from aa 260 - 410 of Rv1736c|MTCY04C12.21c|NARX PROBABLE NITRATE REDUCTASE from Mycobacterium tuberculosis (64.8% identity in 159 aa overlap). PROBABLE RESPIRATORY NITRATE REDUCTASE (DELTA CHAIN) NARJ	InterProMatches:IPR003765; Biological Process: electron transport (GO:0006118), Molecular Function: nitrate reductase activity (GO:0008940), Cellular Component: nitrate reductase complex (GO:0009325) nitrate reductase (protein J)	nitrate reductase 1, delta subunit, chaperone required for molybdenum cofactor assembly in nitrate reductase 1	similar to Salmonella typhi CT18 respiratory nitrate reductase 1 delta chain respiratory nitrate reductase 1 delta chain	Nitrate reductase 1, delta subunit	nitrate reductase, delta subunit	Code: C; COG: COG2180 nitrate reductase 1, delta subunit, assembly function	Code: C; COG: COG2180 nitrate reductase 1 delta subunit, assembly function	Code: C; COG: COG2180 nitrate reductase 1, delta subunit, assembly function	nitrate reductase 1, delta subunit identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684	Respiratory nitrate reductase 1 delta chain	Nitrate reductase molybdenum cofactor assembly chaperone	Nitrate reductase molybdenum cofactor assembly chaperone	nitrate reductase delta chain similarity to COG2180 Nitrate reductase delta subunit	Nitrate reductase molybdenum cofactor assembly chaperone	Nitrate reductase 1 delta subunit	
ECOLI01185	Respiratory nitrate reductase 1 gamma chain	Respiratory nitrate reductase 1 gamma chain	Respiratory nitrate reductase 1 gamma chain	similar to GB:M64929, SP:Q00005, SP:Q00007, and PID:190422; identified by sequence similarity; putative respiratory nitrate reductase, gamma subunit	Respiratory nitrate reductase 1 gamma chain	RESPIRATORY NITRATE REDUCTASE 2 GAMMA CHAIN	Nitrate reductase 1, cytochrome b(NR), gamma subunit	Residues 1 to 225 of 225 are 99 pct identical to residues 1 to 225 of a 225 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287475.1 nitrate reductase 1, cytochrome b(NR), gamma subunit	nitrate reductase 1, cytochrome b(NR), gamma subunit	similar to Salmonella typhi CT18 respiratory nitrate reductase 1 gamma chain respiratory nitrate reductase 1 gamma chain	similar to BRA0296, respiratory nitrate reductase, gamma subunit NarI, respiratory nitrate reductase, gamma subunit	Nitrate reductase 1, cytochrome b(NR), gamma subunit	Code: C; COG: COG2181 nitrate reductase 1, cytochrome b(NR), gamma subunit	Nitrate reductase, gamma subunit	Code: C; COG: COG2181 nitrate reductase 1 cytochrome b(NR), gamma subunit	Code: C; COG: COG2181 nitrate reductase 1, cytochrome b(NR), gamma subunit	Respiratory nitrate reductase 1 gamma chain	Respiratory nitrate reductase, gamma subunit	Respiratory nitrate reductase, gamma subunit	Respiratory nitrate reductase, gamma subunit	Nitrate reductase 1, cytochrome b(NR), gamma subunit	respiratory nitrate reductase, gamma subunit TIGRFAM: respiratory nitrate reductase, gamma subunit PFAM: Nitrate reductase, gamma subunit KEGG: mmr:Mmar10_2703 respiratory nitrate reductase, gamma subunit	nitrate reductase, gamma subunit	Nitrate reductase, gamma subunit	nitrate reductase 1, cytochrome b(NR), gamma subunit Code: C; COG: COG2181	Respiratory nitrate reductase, gamma subunit	Nitrate reductase, gamma subunit	respiratory nitrate reductase 1 gamma chain	Respiratory nitrate reductase, gamma subunit	
ECOLI01188	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	PurU	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate hydrolase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate hydrolase	putative formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	FORMYLTETRAHYDROFOLATE DEFORMYLASE	Formyltetrahydrofolate hydrolase	formyltetrahydrofolate deformylase	formyltetrahydrofolate hydrolase	Putative formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase	Formyltetrahydrofolate deformylase; for purT- dependent FGAR synthesis	similar to AX064399-1|CAC25440.1| percent identity: 87 in 305 aa putative formyltetrahydrofolate deformylase	
ECOLI01189	UPF0225 protein ychJ	UPF0225 protein XCC4159	UPF0225 protein HI0277	UPF0225 protein SAV_6631	Putative uncharacterized protein	Putative uncharacterized protein	UPF0225 protein PM1617	UPF0225 protein PA1039	UPF0225 protein VV1358	UPF0225 protein DR_0483	pseudo	Putative uncharacterized protein	UPF0225 protein Cgl1438/cg1626	Putative uncharacterized protein	conserved hypothetical protein	UPF0225 protein ychJ	SEC-C motif domain protein	UPF0225 protein VC_1852	UPF0225 protein BP2036	UPF0225 protein BB3385	UPF0225 protein SO_2497	UPF0225 protein ECA2332	Putative uncharacterized protein	UPF0225 protein PSPTO_4127	UPF0225 protein BPP1723	Putative uncharacterized protein	Putative uncharacterized protein	Putative preprotein translocase subunit	UPF0225 protein VP1145	
ECOLI01190	NTE family protein rssA	Serine protease	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Serine protease	Hypothetical protein ychK	identified by match to protein family HMM PF01734 phospholipase, putative	identified by match to PFAM protein family HMM PF01734 conserved hypothetical protein	Putative uncharacterized protein	Patatin-like phospholipase	Putative phospholipase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	SERINE PROTEASE	Putative uncharacterized protein ychK	hypothetical protein	Patatin-like phospholipase domain	Predicted esterase of the alpha-beta hydrolase superfamily	Residues 1 to 314 of 314 are 99 pct identical to residues 1 to 314 of a 314 aa protein from Escherichia coli K12 ref: NP_415750.1 orf, conserved hypothetical protein	Similar to conserved hypothetical protein hypothetical protein	conserved gene phosphoesterase	Similar to conserved hypothetical protein hypothetical protein	Putative uncharacterized protein	Phosphoesterase protein	Uncharacterized NTE family protein Rv1063c/MT1093	Mb1092c, -, len: 360 aa. Equivalent to Rv1063c, len: 360 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 360 aa overlap). Conserved hypothetical protein, similar to P37053|YCHK_ECOLI hypothetical protein from Escherichia coli (314 aa), FASTA scores: opt: 487, E(): 7.2e-23, (32.7% identity in 321 aa overlap). Also partially similar to Rv3239c|MTCY20B11.14c. BELONGS TO THE UPF0028 (SWS) FAMILY. CONSERVED HYPOTHETICAL PROTEIN	esterase	Phospholipase domain protein	IPR001423: Protein of unknown function UPF0028; IPR002641: Patatin putative phosphoesterase	
ECOLI01191	Protein hnr	Response regulator	Putative regulatory protein	hypothetical response regulator	Hnr protein	Response regulator	Response regulator	Response regulator	Response regulator	Response regulator	Protein hnr	Response regulator	Residues 1 to 337 of 337 are 100 pct identical to residues 1 to 337 of a 337 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287480.1 Hnr protein	Probable response regulator	Hnr protein	IPR001789: Response regulator receiver putative regulatory protein	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	Probable response regulator	Hnr protein	Response regulator	Response regulator of sigma subunit, serine phosphatase (CheY-RsbU)	Response regulator in protein turnover	identified by match to protein family HMM PF00072; match to protein family HMM PF07228 response regulator	Response regulator receiver:Stage II sporulation E	Code: T; COG: COG0784 Hnr protein	Code: T; COG: COG0784 Hnr	Serine phosphatase RsbU, regulator of sigma subunit COG2208	Code: T; COG: COG0784 Hnr protein	Putative two-component response regulator	
ECOLI01192	UTP--glucose-1-phosphate uridylyltransferase	Putative UTP--glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	ADP-glucose pyrophosphorylase	UTP-glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	Glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridylyltransferase	Putative UTP-glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	Putative UTP-glucose-1-phosphate uridylyltransferase	putative glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099 UTP-glucose-1-phosphate uridylyltransferase	identified by match to TIGR protein family HMM TIGR01208 UTP--glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridylyltransferase	UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE	UTP-glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	similar to AL035500-22|CAB36696.1| percent identity: 63 in 300 aa putative UTP--glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)	UTP--glucose-1-phosphate uridylyltransferase	
ECOLI01193	DNA-binding protein H-NS	DNA-binding protein H-NS	DNA-binding protein H-NS	putative DNA-binding protein H-NS	DNA-binding protein H-NS	DNA-binding protein Hns	DNA-binding protein H-NS	DNA-binding protein H-NS homolog	DNA-binding protein H-NS	Residues 1 to 137 of 137 are 100 pct identical to residues 1 to 137 of a 137 aa protein from Shigella flexneri pir: S24755 DNA-binding protein H-NS homolog virR	DNA-binding protein Hns	Hns protein	DNA-binding protein H-NS	IPR001801: Histone-like nucleoid-structuring protein H-NS DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator	similar to Salmonella typhi CT18 DNA-binding protein (histone-like protein Hlp-II) DNA-binding protein (histone-like protein Hlp-II)	DNA-binding protein Hns	DNA-binding protein H-NS	DNA-binding protein H-NS	ortholog to Escherichia coli bnum: b1237; MultiFun: Cell processes 5.3; Cell structure 6.4; Information transfer 2.2.2, 2.3.7; Regulation 3.1.2 DNA-binding protein HLP-II (HU, BH2, HD, NS)	HU, BH2, HD, NS; pleiotropic regulator; Code: R; COG: COG2916 DNA-binding protein HLP-II	DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator; Code: R; COG: COG2916 Hns	histone-like protein	HU, BH2, HD, NS; pleiotropic regulator; Code: R; COG: COG2916 DNA-binding protein HLP-II	DNA-binding protein H-NS	DNA-binding protein Hns	Hns transcriptional dual regulator	DNA-binding protein H-NS identified by similarity to SP:P08936; match to protein family HMM PF00816	DNA-binding protein Hns	DNA-binding protein Hns	
ECOLI01194	Thymidine kinase	THYMIDINE KINASE;01_0740i, THYMIDINE KINASE, KITH_ENCCU, E. cuniculi gene DNA cross-ref : AJ006824, gene found by Glimmer, modified ATG by annotation;	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	putative thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	PMID: 2060797 PMID: 2041474 best DB hits: BLAST: gb:AAK03320.1; (AE006163) Tdk [Pasteurella multocida]; E=2e-66 swissprot:P44309; KITH_HAEIN THYMIDINE KINASE ----- pir:; E=3e-65 swissprot:P23331; KITH_ECOLI THYMIDINE KINASE ----- pir:; E=2e-64 COG: HI0529; COG1435 Thymidine kinase; E=3e-66 PFAM: PF00265; Thymidine kinase; E=4.9e-88 thymidine kinase Tdk	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE THYMIDINE KINASE PROTEIN	thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	Thymidine kinase	thymidine kinase	Thymidine kinase	


ECOLI01196	Aldehyde-alcohol dehydrogenase	Aldehyde-alcohol dehydrogenase E	Aldehyde-alcohol dehydrogenase	Adh2	Alcohol dehydrogenase/acetaldehyde dehydrogenase	Alcohol dehydrogenase	Aldehyde-alcohol dehydrogenase	Lmo1634 protein	Alcohol dehydrogenase	Bifunctional protein: aldehyde dehydrogenase; alcohol dehydrogenase	putative alcohol dehydrogenase/acetaldehyde dehydrogenase	Aldehyde-alcohol dehydrogenase	Alcohol dehydrogenase, iron-containing	identified by match to protein family HMM PF00465 aldehyde-alcohol dehydrogenase	Alcohol dehydrogenase/acetaldehyde dehydrogenase	Aldehyde-alcohol dehydrogenase	Aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase and acetaldehyde dehydrogenase, and pyruvate- formate-lyase deactivase	Aldehyde-alcohol dehydrogenase	Putative alcohol dehydrogenase II	Putative alcohol-acetaldehyde dehydrogenase	Alcohol dehydrogenase/acetaldehyde dehydrogenase	Aldehyde-alcohol dehydrogenase	Aldehyde-alcohol dehydrogenase	Alcohol dehydrogenase	Lin1675 protein	Residues 1 to 891 of 891 are 99 pct identical to residues 1 to 891 of a 891 aa protein from Escherichia coli K12 ref: NP_415757.1 CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase	Aldehyde-alcohol dehydrogenase	Alcohol-acetaldehyde dehydrogenase	Aldehyde-alcohol dehydrogenase	
ECOLI01197	UPF0056 membrane protein yhcE	Multiple antibiotic resistance protein	Membrane protein, putative	Multiple antibiotic resistance protein	Small neutral amino acid transporter	UPF0056 membrane protein AF_2111	UPF0056 membrane protein aq_540	Hypothetical membrane protein	UPF056 membrane protein PYRAB13050	Putative uncharacterized protein PF0745	Multiple antibiotic resistance protein marC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Multiple antibiotic transporter	Putative membrane protein	All2000 protein	MarC family integral membrane protein	Putative membrane protein	putative transporter protein	Hypothetical protein ychE	Membrane protein, MarC family	Putative uncharacterized protein	Putative uncharacterized protein	UPF0056 membrane protein BUsg_257	Membrane protein, MarC family	Membrane protein, MarC family	Putative channel protein	Putative channel protein	


ECOLI01198	Periplasmic oligopeptide-binding protein	Periplasmic oligopeptide-binding protein	Periplasmic oligopeptide-binding protein	Oligopeptide transport; periplasmic binding protein	Residues 25 to 567 of 567 are 99 pct identical to residues 1 to 543 of a 543 aa protein from Escherichia coli O157:H7 ref: NP_309770.1 oligopeptide  transport periplasmic binding protein	Periplasmic oligopeptide-binding protein	Periplasmic-binding protein OppA2	similar to Salmonella typhi CT18 periplasmic oligopeptide-binding protein precursor periplasmic oligopeptide-binding protein precursor	ABC transporter, periplasmic oligopeptide-binding protein oppA	Periplasmic oligopeptide-binding protein	Code: E; COG: COG4166 oligopeptide transport periplasmic binding protein	Code: E; COG: COG4166 oligopeptide transport periplasmic binding protein	oligopeptide transport; periplasmic binding protein; Code: E; COG: COG4166 OppA	Periplasmic oligopeptide-binding protein	Periplasmic oligopeptide-binding protein precursor	Periplasmic oligopeptide-binding protein	putative dipeptide-binding ABC transporter protein COG4166 ABC-type oligopeptide transport system, periplasmic component	Periplasmic oligopeptide-binding protein precursor	Periplasmic oligopeptide-binding protein precursor	Periplasmic oligopeptide-binding protein precursor Code: E; COG: COG4166	Periplasmic oligopeptide-binding protein precursor	periplasmic oligopeptide-binding protein precursor	oligopeptide transporter, periplasmic-binding protein	Extracellular solute-binding protein, family 5 precursor	Oligopeptide transport protein	Putative uncharacterized protein	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein	Oligopeptide transporter periplasmic subunit	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein	
ECOLI01199	Oligopeptide transport system permease protein oppB	Oligopeptide transport system permease protein	OppB	Oligopeptide ABC transporter, permease protein	ABC transporter, membrane spanning protein	Oligopeptide transport system permease protein OppB	Oligopeptide ABC transporter, permease protein	Oligopeptide transport system permease protein oppB	Oligopeptide ABC transporter, permease	putative oligopeptide ABC transporter, permeaseprotein	Oligopeptide transport system permease protein oppB	identified by match to protein family HMM PF00528 oligopeptide ABC transporter, permease protein	Oligopeptide ABC transporter, permease protein	Oligopeptide transport system permease protein	oligopeptide ABC transporter permease protein	Oligopeptide transport system permease protein OppB	Oligopeptide ABC transporter, permease protein	Oligopeptide transport system permease protein oppB	Oligopeptide ABC transporter, permease component	ABC-type dipeptide/oligopeptide/nickel transport system, permease component	Residues 1 to 306 of 306 are 100 pct identical to residues 1 to 306 of a 306 aa protein from Escherichia coli O157:H7 ref: NP_309771.1 oligopeptide transport permease protein	Oligopeptide transport system permease protein	DppB/OppB	oligopeptide transport system permease protein	Oligopeptide transport system permease protein OppB	Oligopeptide transport system permease protein	Oligopeptide ABC transporter	InterProMatches:IPR000515; required for initiation of sporulation, competence development, and oligopeptide transport,Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) oligopeptide ABC transporter (permease)	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), oligopeptide transport protein	
ECOLI01200	Oligopeptide transport system permease protein oppC	OppC	ABC transporter, membrane spanning protein	Oligopeptide ABC transporter, permease	Putative oligopeptide transport system permease protein	Putative oligopeptide ABC transporter	Oligopeptide ABC transporter, permease protein	Oligopeptide ABC transporter	Oligopeptide transport system permease protein oppC	identified by match to protein family HMM PF00528 oligopeptide ABC transporter, permease protein	similar to GP:15140749; identified by sequence similarity; putative oligopeptide ABC transporter, permease protein	Oligopeptide ABC transporter, permease protein	Oligopeptide transport system permease protein	PMID: 1738314 PMID: 1901616 best DB hits: BLAST: pir:D82242; oligopeptide ABC transporter, permease protein VC1093; E=4e-50 swissprot:P45053; OPPC_HAEIN OLIGOPEPTIDE TRANSPORT SYSTEM; E=1e-46 pir:D70141; oligopeptide ABC transporter, permease protein (oppC-1); E=5e-46 COG: VC1093; COG1173 ABC-type dipeptide/oligopeptide/nickel transport; E=4e-51 PFAM: PF00528; Binding-protein-dependent transpor; E=9.1e-10 oligopeptide transport system permease protein OppC	oligopeptide ABC transporter permease protein	Oligopeptide ABC transporter, permease protein	OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN OPPC	Oligopeptide ABC transporter, permease protein	Oligopeptide transport system permease protein oppC	OLIGOPEPTIDE ABC TRANSPORTER PERMEASE PROTEIN	Probable oligo/dipeptide ABC transporter (Permease) oppC	Residues 1 to 302 of 302 are 99 pct identical to residues 1 to 302 of a 302 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287488.1 homolog of Salmonella oligopeptide transport permease protein	Oligopeptide Permease	Oligopeptide transport system permease protein	DppC	Oligopeptide transport system permease protein OppC	identified by similarity to GP:10717145; match to protein family HMM PF00528 oligopeptide ABC transporter, permease protein	Oligopeptide transport system permease protein	Oligopeptide transport system permease protein OppC	
ECOLI01201	Oligopeptide transport ATP-binding protein oppD	OppD	Oligopeptide ABC transporter, ATP-binding protein	Oligopeptide transport ATP-binding protein OppD	ATPase OppD	putative oligopeptide ABC transporter,ATP-binding protein	Oligopeptide transport ATP-binding protein	Oligopeptide transport ATP-binding protein oppD	Oligopeptide ABC transporter, ATP-binding protein	Oligopeptide transport ATP-binding protein	Oligopeptide ABC transporter, ATP-binding protein	Homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system	Oligopeptide ABC transporter, ATP-binding protein	Lin2297 protein	Residues 1 to 337 of 337 are 100 pct identical to residues 1 to 337 of a 337 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287489.1 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system	Oligopeptide transport ATP-binding protein	Oligopeptide transport ATP-binding protein OppF	Oligopeptide transport system ATP-binding protein	Oligopeptide ABC transporter	InterProMatches:IPR010066 dipeptide ABC transporter (ATP-binding protein)	IPR003439: ABC transporter ABC superfamily (atp-binding), oligopeptide transport protein	similar to Salmonella typhi CT18 oligopeptide transport ATP-binding protein OppD oligopeptide transport ATP-binding protein OppD	ABC oligopeptide transporter, ATP-binding subunit oppD	Oligopeptide ABC transporter, ATP-binding protein	identified by similarity to SP:P24136; match to protein family HMM PF00005; match to protein family HMM TIGR01727 oligopeptide ABC transporter, ATP-binding protein	oligopeptide transport ATP-binding protein OppD	Similar to: HI1121, OPPD_HAEIN oligopeptide transport ATP-binding protein	Oligopeptide transport ATP-binding protein oppD	Code: EP; COG: COG0444 ATP-binding protein of oligopeptide ABC transport system	
ECOLI01202	Oligopeptide transport ATP-binding protein oppF	Oligopeptide ABC transporter ATP-binding	OppF	ABC-type oligopeptide transport system, ATPase component	Oligopeptide transport ATP-binding protein OppF	putative oligopeptide ABC transporter,ATP-binding protein	Oligopeptide transport ATP-binding protein oppF	similar to GP:3402247; identified by sequence similarity; putative peptide ABC transporter, ATP-binding protein	Oligopeptide transport ATP-binding protein	oligopeptide ABC transporter ATP-binding protein	Oligopeptide ABC transporter, ATP-binding protein	Homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system	CDS_ID OB2263 oligopeptide ABC transporter ATP-binding protein	OLIGOPEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN OPPF	Probable oligo/dipeptide abc transporter, ATP- binding protein oppF	Oligopeptide ABC transporter, ATPase component	ABC-type oligopeptide transport system, ATPase component	Residues 1 to 334 of 334 are 100 pct identical to residues 1 to 334 of a 334 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287490.1 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system	Oligopeptide transport ATP-binding protein	Oligopeptide transport ATP-binding protein OppF	Oligopeptide ABC transport system ATP-binding protein OppF	Oligopeptide ABC transporter	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp-binding), oligopeptide transport protein	similar to Salmonella typhi CT18 oligopeptide transport ATP-binding protein OppF oligopeptide transport ATP-binding protein OppF	Similar to Lactobacillus delbrueckii ATP-binding protein oligopeptide transporter OppF SWALL:Q8VPJ1 (EMBL:AY040221) (318 aa) fasta scores: E(): 7.9e-26, 35.04% id in 234 aa, and to Chlamydophila caviae peptide ABC transporter, ATP-binding protein cca00605 SWALL:Q822S4 (EMBL:AE016996) (261 aa) fasta scores: E(): 4.9e-85, 90.03% id in 261 aa, and to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu3437 or agr_l_2779 SWALL:Q8UAD7 (EMBL:AE009274) (311 aa) fasta scores: E(): 2.2e-28, 38.86% id in 229 aa putative peptide ATP-binding component of ABC transporter	ABC oligopeptide transporter, ATP-binding subunit oppF	oligopeptide transport ATP-binding protein OppF	Similar to: HI1120, OPPF_HAEIN oligopeptide transport ATP-binding protein	Similar to OPPF_HAEIN (P45051) Oligopeptide transport ATP-binding oppF from Haemophilus influenzae (332 aa). FASTA: opt: 1227 Z-score: 1398.5 E(): 5.3e-70 Smith-Waterman score: 1227; 56.790 identity in 324 aa overlap oligopeptide transporter, subunit F, ABC transporter, ATP-binding protein	
ECOLI01203	UPF0263 protein yciU	UPF0263 protein PM0536	UPF0263 protein VV1228	UPF0263 protein yciU	Conserved hypothetical protein	UPF0263 protein yciU	UPF0263 protein VC_1208	UPF0263 protein ECA2319	UPF0263 protein VP1949	UPF0263 protein yciU	UPF0263 protein VV1_3059	Residues 1 to 111 of 111 are 98 pct identical to residues 25 to 135 of a 135 aa protein from Escherichia coli O157:H7 ref: NP_309775.1 orf, conserved hypothetical protein	UPF0263 protein YPO2187/y2032/YP_1985	UPF0263 protein plu2488	IPR007376: Protein of unknown function DUF440 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0263 protein YPTB2110	hypothetical protein	Similar to: HI1450, YE50_HAEIN; proposed to function as a dsDNA mimic conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	UPF0263 protein yciU	conserved hypothetical protein	Code: S; COG: COG3099 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3099 conserved hypothetical protein	Code: S; COG: COG3099; orf conserved hypothetical protein	UPF0263 protein yciU	Hypothetical protein	Putative uncharacterized protein yciU	
ECOLI01204	Cardiolipin synthetase	Cardiolipin synthetase	Probable phospholipase	Cardiolipin synthetase	Cardiolipin synthase	putative cardiolipin synthase	Cardiolipin synthetase	similar to GP:15157671, and SP:O66043; identified by sequence similarity; putative cardiolipin synthase	Cardiolipin synthase	Cardiolipin synthase	Cardiolipin synthase	Putative cardiolipin synthetase 2	CARDIOLIPIN SYNTHETASE	Cardiolipin synthase	Putative cardiolipin synthase	Cardiolipin synthase	cardiolipin synthase	Cardiolipin synthase	Cardiolipin synthase	Cardiolipin synthetase	Cardiolipin synthase	Phosphatidylserine/phosphatidylglycerophosphate, cardiolipin synthase	Residues 1 to 486 of 486 are 99 pct identical to residues 1 to 486 of a 486 aa protein from Escherichia coli K12 ref: NP_415765.1 cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity	Cardiolipin synthetase	Cardiolipin synthase	cardiolipin synthetase	Cardiolipin synthetase	Cardiolipin synthetase 2	identified by match to protein family HMM PF00614 cardiolipin synthetase	
ECOLI01206	Putative potassium channel protein	Potassium channel protein	Probable potassium channel protein related protein	hypothetical protein	Putative potassium channel protein	Putative potassium channel protein	Putative potassium channel protein	Putative potassium channel protein	Putative potassium channel protein	Putative uncharacterized protein	Residues 7 to 423 of 423 are 99 pct identical to residues 1 to 417 of a 417 aa protein from Escherichia coli O157:H7 ref: NP_309777.1 putative potassium channel protein	Putative potassium channel protein	Putative potassium channel protein, VIC superfamily	predicted NAD-binding protein 2 (probable Kef-type transporter subunit)	Code: P; COG: COG1226 putative potassium channel protein	Evidence 2b : Function of strongly homologous gene; Product type t : transporter putative potassium channel protein	Code: P; COG: COG1226 putative potassium channel protein	putative potassium channel protein	TrkA-N, putative potassium channel protein	Code: P; COG: COG1226 putative potassium channel protein	TrkA-N	Putative potassium channel protein	Putative potassium channel protein	Putative potassium channel protein	TrkA-N domain protein PFAM: TrkA-N domain protein; Ion transport protein; Ion transport 2 domain protein, KEGG: bur:Bcep18194_B1715 TrkA-N, putative potassium channel protein	Potassium channel protein	TrkA-N domain protein PFAM: TrkA-N domain protein; Ion transport protein; Ion transport 2 domain protein, KEGG: bcn:Bcen_4068 TrkA-N	Putative potassium channel protein precursor	putative potassium channel protein Code: P; COG: COG1226	
ECOLI01207	Protein yciI	Uncharacterized protein HI0828	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Protein yciI	similar to GP:15157856; identified by sequence similarity; putative conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Hypothetical Cytosolic Protein	Putative uncharacterized protein VP1972	Putative uncharacterized protein yciI	hypothetical protein	YCII-related domain-like protein	Residues 1 to 130 of 130 are 99 pct identical to residues 1 to 130 of a 130 aa protein from Escherichia coli O157:H7 ref: NP_309778.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	identified by similarity to GB:AAB60126.1; match to protein family HMM PF03795 YCII-related domain protein	Putative uncharacterized protein	Putative uncharacterized protein	putative cytoplasmic protein	
ECOLI01208	Protein tonB	TonB protein	Putative uncharacterized protein	Periplasmic protein TonB1	TonB protein	Similar to TonB protein	Putative TonB-like transport protein	TonB protein	TonB domain protein	Siderophore-mediated iron transport protein	Siderophore-mediated iron transport protein	TonB2 protein	TonB protein	TonB protein, putative	Siderophore-mediated iron transport protein	Putative uncharacterized protein TONB2	Putative TonB protein	TonB-like protein	Energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins	Possible energy transducer TonB, C-terminal region	Residues 13 to 256 of 256 are 99 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli gb: AAB60117.1 membrane protein	TonB protein	Probable tonb transmembrane protein	TonB protein	IPR000694: Proline-rich region; IPR003538: Gram-negative bacterial tonB protein energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins	similar to Salmonella typhi CT18 TonB protein TonB protein	similar to BR1668, TonB-dependent receptor TonB-dependent receptor	TonB protein	TonB protein	
ECOLI01209	Acyl-CoA thioester hydrolase yciA	Uncharacterized acyl-CoA thioester hydrolase HI0827	Cytosolic long-chain acyl-CoA thioester hydrolase family protein	Acyl CoA thioester hydrolase family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative hydrolase	Acyl-CoA hydrolase	Acyl-CoA thioester hydrolase yciA	Probable acyl CoA thioester hydrolase	Thioesterase superfamily protein	putative acyl-CoA hydrolase	Acyl-CoA thioester hydrolase yciA	similar to GP:15074832; identified by sequence similarity; putative long-chain acyl-CoA thioester hydrolase, putative	Putative uncharacterized protein	Putative thioesterase	Putative thioesterase	Putative acyl-CoA thioester hydrolase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Uncharacterized acyl-CoA thioester hydrolase BUsg_263	Cytosolic long-chain acyl-CoA thioester hydrolase family protein	Putative thioesterase	Thioesterase domain protein	ACYL-COA HYDROLASE	Putative acyl-CoA hydrolase	Putative uncharacterized protein yciA	probable acyl-CoA hydrolase	Uncharacterized acyl-CoA thioester hydrolase BU274	SCBAC19F3.07, partial CDS, len: 119aa: similar to N-terminus of many eg. SW:P49851 (YKHA_BACSU) putative acyl-CoA thioester hydrolase from Bacillus subtilis (179 aa) fasta scores; opt: 240, Z-score: 251.9, 39.815% identity (40.187% ungapped) in 108 aa overlap. hypothetical protein (fragment)	
ECOLI01210	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	putative intracellular septation protein A	Probable intracellular septation protein	identified by match to TIGR protein family HMM TIGR00997 intracellular septation protein A	Probable intracellular septation protein	Probable intracellular septation protein	Putative intracellular septation protein	Putative intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Probable intracellular septation protein	Probable intracellular septation protein	Putative intracellular septation protein	Intracellular septation protein A	Probable intracellular septation protein	Probable intracellular septation protein	Probable intracellular septation protein	intracellular septation protein	
ECOLI01211	UPF0259 membrane protein yciC	UPF0259 membrane protein yciC	UPF0259 membrane protein ECA2305	UPF0259 membrane protein BUsg_265	Membrane protein, putative	UPF0259 membrane protein yciC	UPF0259 membrane protein BU276	Residues 1 to 227 of 227 are 99 pct identical to residues 21 to 247 of a 247 aa protein from Escherichia coli K12 ref: NP_415771.1 orf, conserved hypothetical protein	UPF0259 membrane protein YPO2199/y2042/YP_1997	UPF0259 membrane protein WIGBR3650	UPF0259 membrane protein plu2479	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	UPF0259 membrane protein YPTB2121	Putative uncharacterized protein	UPF0259 membrane protein bbp_256	UPF0259 membrane protein yciC	ortholog to Escherichia coli bnum: b1255; MultiFun: Cell structure 6.1 putative membrane protein, transport	identified by match to protein family HMM PF06790 membrane protein, putative	identified by match to protein family HMM PF06790 membrane protein, putative	Protein of unknown function UPF0259	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Protein of unknown function UPF0259	orf conserved hypothetical protein	UPF0259 membrane protein yciC	Putative membrane protein precursor	UPF0259 membrane protein yciC	
ECOLI01212	Outer membrane protein W	Outer membrane protein	Outer membrane protein OmpW	OmpW	Outer membrane protein OprG	Outer membrane protein	Outer membrane protein W	Putative outer membrane protein	Outer membrane protein W	identified by match to PFAM protein family HMM PF03922 membrane protein, putative	Outer membrane protein W	Putative outer membrane protein	Putative outer membrane protein	Outer membrane protein OmpW, putative	Outer membrane protein W	Outer membrane protein OmpW	Putative outer membrane protein	Outer membrane protein, OmpW family	OUTER MEMBRANE PROTEIN W	Outer membrane protein	Putative outer membrane protein	outer membrane protein	Putative outer membrane protein	Residues 1 to 212 of 212 are 100 pct identical to residues 1 to 212 of a 212 aa protein from Escherichia coli K12 ref: NP_415772.1 putative outer membrane protein	Putative exported protein	Probable outer membrane w-related protein signal peptide	Outer membrane protein W	identified by similarity to SP:P17266; match to protein family HMM PF03922 outer membrane protein OmpW	Outer membrane protein W	
ECOLI01213	Protein yciE	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein yciE	Product confidence : hypothetical Gene name confidence : hypothetical CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein yciE	Residues 1 to 168 of 168 are 98 pct identical to residues 1 to 168 of a 168 aa protein from Escherichia coli gb: AAA65161.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	protein of unknown function DUF892	Code: S; COG: COG3685; orf conserved hypothetical protein	Putative uncharacterized protein	Protein of unknown function DUF892	conserved hypothetical protein	hypothetical conserved protein Similar to C-terminal of Magn5102 [Magnetospirillum magnetotacticum], SMb20091 [Sinorhizobium meliloti] andyciE [Escherichia coli K12] Similar to entrez-protein:ZP_00052374.1 Putative location:bacterial cytoplasm Psort-Score: 0.1623	Protein YciE	Hypothetical protein	Putative uncharacterized protein yciE	protein of unknown function DUF892 PFAM: protein of unknown function DUF892 KEGG: bcn:Bcen_1353 protein of unknown function DUF892	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG3685	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01214	Protein yciF	Putative uncharacterized protein	Putative uncharacterized protein	All0615 protein	Protein yciF	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Putative structural proteins	Probable yciF protein	Residues 17 to 182 of 182 are 99 pct identical to residues 1 to 166 of a 166 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287941.1 putative structural proteins	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	Protein of unknown function DUF892	conserved hypothetical protein	Protein of unknown function DUF892	conserved hypothetical protein	Protein of unknown function DUF892	protein of unknown function DUF892	protein of unknown function DUF892	conserved hypothetical protein similarity:fasta; with=UniProt:Q92SS4 (EMBL:SME591783); Rhizobium meliloti (Sinorhizobium meliloti).; Hypothetical protein SMc00371.; length=163; id 77.160; 162 aa overlap; query 1-162; subject 1-162	conserved hypothetical protein	protein of unknown function DUF892	Protein YciF	hypothetical protein	Protein yciF	
ECOLI01215	Uncharacterized protein yciG	Putative uncharacterized protein yciG	Residues 1 to 78 of 78 are 97 pct identical to residues 1 to 78 of a 78 aa protein from Escherichia coli K12 ref: NP_415775.1 orf, conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yciG	conserved hypothetical protein Code: R; COG: COG3729	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yciG	Putative uncharacterized protein yciG	Putative uncharacterized protein yciG	Putative uncharacterized protein yciG	Putative uncharacterized protein yciG	YciG protein	Putative uncharacterized protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI01216	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	hypothetical tryptophan synthase alpha subunit	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	Tryptophan synthase alpha chain	
ECOLI01217	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain 1	Tryptophan synthase, beta subunit	Tryptophan synthase beta chain	Tryptophan synthase beta chain 1	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain 1	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain 1	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain 1	Tryptophan synthase beta chain	Tryptophan synthase, beta chain	Tryptophan synthase beta chain 1	Tryptophan synthase beta chain 1	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain	Tryptophan synthase beta chain 1	Tryptophan synthase beta chain	
ECOLI01218	Tryptophan biosynthesis protein trpCF	Tryptophan biosynthesis protein trpCF	Indole-3-glycerol phosphate synthase	Tryptophan biosynthesis protein trpCF	Tryptophan biosynthesis protein trpCF	putative phosphoribosylanthranilate isomerase(trpF); indole-3-glycerol phosphate synthase (trpC)	Tryptophan biosynthesis protein trpCF	Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase	Tryptophan biosynthesis protein [includes: indole -3-glycerol phosphate synthase and N-(5'-phospho- ribosyl)anthranilate isomerase	Tryptophan biosynthesis protein trpCF	Tryptophan biosynthesis protein trpCF	Tryptophan biosynthesis protein trpCF	Tryptophan biosynthesis protein TrpCF	Tryptophan biosynthesis protein trpCF	similar to AX064149-1|CAC25315.1| percent identity: 81 in 474 aa indole-3-glycerol phosphate synthase/N-(5'-phospho-ribosyl)anthranilate isomerase	Tryptophan biosynthesis protein trpCF	Phosphoribosylanthranilate isomerase	Residues 2 to 453 of 453 are 99 pct identical to residues 1 to 452 of a 452 aa protein from Escherichia coli gb: AAA65144.1 anthranilate isomerase	Tryptophan biosynthesis protein trpCF	Tryptophan biosynthesis protein TrpCF	Indole-3-glycerol phosphate synthase	bifunctional; IPR001468: Indole-3-glycerol phosphate synthase N-(5-phosphoribosyl)anthranilate isomerase/indole-3-glycerolphosphate synthetase	similar to Salmonella typhi CT18 indole-3-glycerol phosphate synthase indole-3-glycerol phosphate synthase	Phosphoribosylanthranilate isomerase	Tryptophan biosynthesis protein trpCF	Tryptophan biosynthesis protein TrpCF	N-(5'-phosphoribosyl)anthranilate isomerase indole-3-glycerol phosphate synthase	IGPS; PRAI; Similar to: HI1389.1, TRPC_HAEIN tryptophan biosynthesis protein trpCF	Indole-3-glycerol phosphate synthase TrpC protein	
ECOLI01219	Anthranilate synthase component II	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate synthase component II	Anthranilate synthase component II	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate synthase component II	putative anthranilate phosphoribosyltransferase	Anthranilate synthase component II	anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	Residues 1 to 531 of 531 are 99 pct identical to residues 1 to 531 of a 531 aa protein from Escherichia coli K12 ref: NP_415779.1 anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase	Anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase	
ECOLI01220	Anthranilate synthase component 1	Anthranilate synthase component I and II	Probable anthranilate synthase component 1 [Source:GeneDB_Spombe;Acc:SPCC1442.09]	highly similar to sp|P00899 Saccharomyces cerevisiae YER090w TRP2 anthranilate synthase component I, start by similarity	Anthranilate synthase component I	Anthranilate synthase component I	Anthranilate synthase component 1	highly similar to uniprot|P00899 Saccharomyces cerevisiae YER090w TRP2;	Anthranilate synthase component I	Putative anthranilate synthase component I	Anthranilate synthase component I	Anthranilate synthase component 1	Anthranilate synthase component 1	TrpE	Anthranilate synthase component 1	Anthranilate synthase component I	Anthranilate synthase component I	Anthranilate synthase component I	Anthranilate synthase component I	Anthranilate synthase component I and II	Anthranilate synthase component I	Anthranilate synthase	TrpE protein	Anthranilate synthase component 1	Anthranilate synthase component 1	Anthranilate synthase component I	putative anthranilate/para-aminobenzoate synthase component I, TrpE protein	Anthranilate synthase component I	menaquinone-specific isochorismate synthase	
ECOLI01222	Protein trpH	Protein trpH	Vng2493c	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE1015	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted metal-dependent phosphoesterase	Putative uncharacterized protein STY1329	Putative uncharacterized protein	Putative uncharacterized protein	putative metal-dependent phosphoesterase	Protein trpH	unknown	PHP domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	TrpH family protein	Putative phosphoesterase	PHP domain protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Phosphoesterase, putative	Predicted metal-dependent phosphoesterase	
ECOLI01223	Uncharacterized protein yciO	Sua5/YciO/YrdC/YwlC family protein	Sll0216 protein	Putative uncharacterized protein	Uncharacterized protein HI1198	Putative Sua5/yciO/yrdC family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative translation factor	Predicted translation factor SUA5	Putative uncharacterized protein	Alr0201 protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Sua5/YciO/YrdC/YwlC family protein	putative translation factor	Protein yciO	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Sua5/YciO/YrdC/YwlC family protein	Putative uncharacterized protein	Sua5/YciO/YrdC/YwlC family protein	Putative uncharacterized protein	Sua5/YciO/YrdC/YwlC family protein	
ECOLI01224	Uncharacterized protein yciQ	Hypothetical protein yciQ	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	conserved hypothetical protein	putative transmembrane protein similarity:fasta; with=UniProt:Q92KK6 (EMBL:SME591785); Rhizobium meliloti (Sinorhizobium meliloti).; HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN. HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN.; length=644; id 59.443; 646 aa overlap; query 3-644; subject 2-644	hypothetical conserved protein similar to SMc00852 [Sinorhizobium meliloti] Similar to swissprot:Q92KK6 Putative location:bacterial inner membrane Psort-Score: 0.5692	Putative membrane protein YciQ	Putative membrane protein precursor	Putative uncharacterized protein yciQ	conserved hypothetical transmembrane signal peptide protein	Membrane protein precursor	Membrane protein precursor	hypothetical protein YciQ	Putative uncharacterized protein	Putative uncharacterized protein	Conserved hypothetical transmembrane signal peptide protein precursor	Membrane-like protein precursor	Predicted inner membrane protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein precursor	Putative membrane protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	
ECOLI01225	Ribosomal large subunit pseudouridine synthase B	Uncharacterized RNA pseudouridine synthase slr0361	Ribosomal large subunit pseudouridine synthase B	Pseudouridine synthase	Pseudouridine synthase	Uncharacterized RNA pseudouridine synthase aq_1464	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase B	Ribosomal large subunit pseudouridine synthase B	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase B	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Uncharacterized RNA pseudouridine synthase ML1370	Pseudouridine synthase	Pseudouridine synthase	putative pseudouridine synthase family 1 protein	Uncharacterized RNA pseudouridine synthase BB_0129	Ribosomal large subunit pseudouridine synthase B	Pseudouridine synthase	identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093 ribosomal large subunit pseudouridine synthase B	Ribosomal large subunit pseudouridine synthase B	Uncharacterized RNA pseudouridine synthase RT0532	Putative uncharacterized protein	
ECOLI01226	Cob(I)yrinic acid a,c-diamide adenosyltransferase	Cob(I)alamin adenosyltransferase	Cob(I)alamin adenolsyltransferase	Cobalamin adenosyltransferase	Cob(I)alamin adenosyltransferase	Putative cob(I)alamin adenolsyltransferase	Possible cob(I)alamin adenosyltransferase	Possible cob(I)alamin adenosyltransferase	Cob(I)yrinic acid a,c-diamide adenosyltransferase	Cob(I)alamin adenosyltransferase	Cob(I)alamin adenosyltransferase	Cob(I)alamin adenosyltransferase	Cob(I)alamin adenosyltransferase	Cob(I)alamin adenosyltransferase	COB(I) alamin adenosyltransferase	Cob(I)alamin adenosyltransferase	Probable COB(I)alamin adenosyltransferase	Cobalamin adenosyltransferase	putative cob(I)alamin adenosyltransferase	Cob(I)yrinic acid a,c-diamide adenosyltransferase	cobalamin adenosyltransferase	identified by match to TIGR protein family HMM TIGR00708 cob(I)alamin adenosyltransferase	Cob(I)alamin adenosyltransferase	Cob(I)alamin adenosyltransferase	Cob(I)alamin adenosyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE COB(I)ALAMIN ADENOSYLTRANSFERASE PROTEIN	Cob(I)alamin adenosyltransferase	Cob(I)alamin adenosyltransferase	cob(I)alamin adenosyltransferase	
ECOLI01227	Uncharacterized oxidoreductase yciK	Short chain dehydrogenase	Oxidoreductase, short chain dehydrogenase/reductase family	Probable short-chain dehydrogenase	Hypothetical oxidoreductase	Oxidoreductase, short-chain dehydrogenase/reductase family	putative oxidoreductase, short-chain dehydrogenase/reductase family	Hypothetical oxidoreductase yciK	Oxidoreductase, short-chain dehydrogenase/reductase family	Putative short chain dehydrogenase	Putative oxidoreductase	Residues 1 to 252 of 252 are 99 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli K12 ref: NP_415787.1 putative oxidoreductase	Putative short chain dehydrogenase	Similar to hypothetical oxidoreductase YciK of Escherichia coli	Probable oxidoreductase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark short chain dehydrogenase	IPR002198: Short-chain dehydrogenase/reductase SDR; IPR002347: Glucose/ribitol dehydrogenase; IPR003560: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase putative oxoacyl-(acyl carrier protein) reductase	Short-chain alcohol dehydrogenase family enzyme	similar to Salmonella typhi CT18 hypothetical oxidoreductase hypothetical oxidoreductase	Short chain dehydrogenase	Putative short chain dehydrogenase	Putative oxidoreductase	Similar to sp|P31808|YCIK_ECOLI sp|P25145|Y432_LISMO sp|Q92EK7|Y452_LISIN sp|Q10783|YF43_MYCTU sp|P46331|YXBG_BACSU; Ortholog to ERGA_CDS_06630 Conserved hypothetical protein (similar to oxidoreductase)	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative oxoacyl-(acyl carrier protein) reductase	conserved family - putative oxidoreductase short-chain dehydrogenase hypothetical protein	Oxidoreductase, short-chain dehydrogenase/reductase family	Oxidoreductase, short chain dehydrogenase/reductase family	Putative oxoacyl-(Acyl carrier protein) reductase	short chain dehydrogenase	
ECOLI01228	Probable protease sohB	Putative protease	Putative protease	SohB	Probable protease	Periplasmic serine protease	Putative protease	putative sohB protein, peptidase U7 family	SohB protein, peptidase U7 family	Possible protease sohB	SohB protein, peptidase U7 family	SohB protein, peptidase U7 family	Protease	Probable protease sohB	Peptidase, U7 family	SohB protein, peptidase U7 family	Putative protease	Non-proteolytic protein, peptidase family S49	Probable protease sohB	Periplasmic serine proteases	Residues 1 to 349 of 349 are 99 pct identical to residues 1 to 349 of a 349 aa protein from Escherichia coli K12 ref: NP_415788.1 putative protease	Peptidase family U7 protein	Possible protease sohB	Similar to protease hypothetical protein	conserved gene signal peptide peptidase SppA (protease IV)	Similar to protease hypothetical protein	IPR000524: Bacterial regulatory protein, GntR family; IPR001092: Basic helix-loop-helix dimerization domain bHLH; IPR002142: Peptidase U7 putative peptidase	similar to Salmonella typhi CT18 putative protease putative protease	Similar to Chlamydia pneumoniae protease sohB or cpn0613 or cp0134 SWALL:Q9Z7U1 (EMBL:AE001645) (333 aa) fasta scores: E(): 1.4e-87, 69.9% id in 319 aa putative exported protease	
ECOLI01229	Protein yciN	Putative uncharacterized protein	conserved hypothetical protein	Protein yciN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1021	Protein yciN	Putative uncharacterized protein	Residues 1 to 83 of 83 are 100 pct identical to residues 1 to 83 of a 83 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287926.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Protein YciN	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative cytoplasmic protein YciN	Hypothetical protein	Putative uncharacterized protein yciN	Hypothetical protein	protein YciN	Hypothetical protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	
ECOLI01230	DNA topoisomerase 1	DNA topoisomerase 1	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase 1	DNA topoisomerase 1	DNA topoisomerase 1	DNA topoisomerase 1	DNA topoisomerase 1	identified by match to PFAM protein family HMM PF03234 DNA topoisomerase I	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase I	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase 1	DNA topoisomerase	DNA topoisomerase 1	DNA topoisomerase 1	DNA topoisomerase 1	DNA topoisomerase 1	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase 1	
ECOLI01231	HTH-type transcriptional regulator cysB	Transcriptional regulator lysR family	HTH-type transcriptional regulator cysB	Putative LysR-family transcriptional regulator	LysR-type transcriptional regulator	CysB	Transcriptional regulator CysB	Cys regulon transcriptional activator	Cys regulon transcriptional activator	putative cys regulon transcriptional activator	LysR-family regulatory protein	HTH-type transcriptional regulator cysB	Transcriptional regulator, LysR family	Cys regulon transcriptional activator	Cys regulon transcriptional activator	Cys regulon transcriptional activator	Cys regulon transcriptional activator	Cys regulon transcriptional activator	HTH-type transcriptional regulator cysB	Cys regulon transcriptional activator	Residues 1 to 324 of 324 are 99 pct identical to residues 1 to 324 of a 324 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287924.1 positive transcriptional regulator for cysteine regulon	Cys regulon transcriptional activator	Cys regulon transcriptional activator	Transcription regulator	Transcriptional regulators, LysR family	Transcriptional regulator CysB	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark transcriptional regulator lysR family	IPR000634: Serine/threonine dehydratase, pyridoxal-phosphate-binding site; IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain transcriptional regulator for cysteine regulon (LysR familiy)	similar to Salmonella typhi CT18 cys regulon transcriptional activator cys regulon transcriptional activator	
ECOLI01233	Uncharacterized protein yciX	Putative uncharacterized protein	Residues 1 to 62 of 62 are 98 pct identical to residues 38 to 99 of a 99 aa protein YCIX_ECOLI sp: P58094 orf, conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	YciX_2 protein	Predicted protein	Putative uncharacterized protein yciX	pseudo conserved predicted protein, C-terminal fragment	Putative uncharacterized protein	
ECOLI01234	Aconitate hydratase 1	Aconitate hydratase	Aconitate hydratase 1	Aconitate hydratase	Aconitase	IRP-like protein	Aconitate hydratase	Aconitase	Aconitate hydratase	Aconitate hydratase	Putative aconitase	Aconitate hydratase	Aconitate hydratase	Aconitate hydratase 1	Aconitate hydratase	Aconitate hydratase 1	Aconitate hydratase	Aconitate hydratase	Aconitate hydratase	Aconitate hydratase 1	Aconitate hydratase 1	CitB protein	Aconitate hydratase	Aconitate hydratase	Aconitate hydratase	Aconitate hydratase	Aconitate hydratase	Aconitate hydratase 1	Aconitate hydratase 1	
ECOLI01235	GTP cyclohydrolase-2	GTP cyclohydrolase-2	Probable GTP cyclohydrolase II	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	CDS_ID OB0424 GTP cyclohydrolase II	GTP cyclohydrolase-2	SC5A7.05, ribA2, GTP cyclohydrolase II, len: 221 aa; highly similar to the C-terminus of many RibA genes where the GTP cyclohydrolase activity is, e.g. GCH2_BACSU GTP cyclohydrolase II (EC 3.5.4.25) (398 aa), fasta sores; opt: 656 z-score: 960.9 E(): 0, 53.1% identity in 196 aa overlap and to SW:GCH2_ARATH (EMBL:D45165) Arabidopsis thaliana GTP cyclohydrolase II (EC 3.5.4.25) 245 aa; fasta scores: opt: 656 Z-score: 760.1 E(): 1.1e-34; 51.832% identity in 191 aa overlap GTP cyclohydrolase II	GTP cyclohydrolase-2	Residues 22 to 217 of 217 are 100 pct identical to residues 1 to 196 of a 196 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287920.1 GTP cyclohydrolase II	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	GTP cyclohydrolase-2	
ECOLI01236	Phosphatidylglycerophosphatase B	PdpB	Phosphatidylglycerophosphatase B	Hypothetical phosphatidylglycerophosphatase B	Phosphatidylglycerophosphatase B	Phosphatidylglycerophosphatase B, putative	Phosphatidylglycerophosphatase B	Phosphatidylglycerophosphatase B	Residues 1 to 254 of 254 are 100 pct identical to residues 1 to 254 of a 254 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287919.1 non-essential phosphatidylglycerophosphate phosphatase, membrane bound	Phosphatidylglycerophosphatase B	IPR000326: PA-phosphatase related phosphoesterase phosphatidylglycerophosphate phosphatase B	similar to Salmonella typhi CT18 phosphatidylglycerophosphatase B phosphatidylglycerophosphatase B	Phosphatidylglycerophosphatase B	Similar to: HI0211, PGPB_HAEIN phosphatidylglycerophosphatase B	Membrane-associated phospholipid phosphatase PgpB protein	Phosphatidylglycerophosphate phosphatase B	phosphatidylglycerophosphatase B	Code: I; COG: COG0671 non-essential phosphatidylglycerophosphate phosphatase, membrane bound	Code: I; COG: COG0671 non-essential phosphatidylglycerophosphate phosphatase, membrane bound	phosphatidylglycerophosphatase B	Code: I; COG: COG0671 non-essential phosphatidylglycerophosphate phosphatase, membrane bound	Phosphatidylglycerophosphatase B	Phosphoesterase, PA-phosphatase related	Phosphatidylglycerophosphatase B	Non-essential phosphatidylglycerophosphate phosphatase, membrane bound	Phosphatidylglycerophosphatase B	Phosphatidylglycerophosphatase B	phosphoesterase, PA-phosphatase related PFAM: phosphoesterase, PA-phosphatase related KEGG: shm:Shewmr7_3657 phosphoesterase, PA-phosphatase related	Phosphatidylglycerophosphatase B precursor	
ECOLI01237	Inner membrane protein yciS	Putative uncharacterized protein	Predicted membrane protein	Putative uncharacterized protein STY1342	conserved hypothetical protein	Hypothetical protein yciS	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein VP2028	Putative uncharacterized protein yciS	Predicted membrane protein	Residues 1 to 102 of 102 are 99 pct identical to residues 1 to 102 of a 102 aa protein from Escherichia coli K12 ref: NP_415795.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to probable membrane protein YciS of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative membrane protein	hypothetical protein	Similar to: HI1222, YCIS_HAEIN predicted membrane protein	Hypothetical protein	Uncharacterized conserved membrane protein	Putative inner membrane protein	conserved hypothetical protein	Code: S; COG: COG3771 conserved hypothetical protein	Code: S; COG: COG3771 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3771; orf conserved hypothetical protein	Putative inner membrane protein YciS	
ECOLI01238	Uncharacterized protein yciM	Putative uncharacterized protein	Uncharacterized protein HI1223	Putative uncharacterized protein	Putative uncharacterized protein	Predicted N-acetylglucosaminyl transferase	Putative uncharacterized protein	Putative membrane protein	putative N-acetylglucosaminyl transferase	Hypothetical protein yciM precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	TPR domain protein	Putative heat shock protein	Uncharacterized protein yciM	Tetratricopeptide repeat family protein	Predicted N-acetylglucosaminyl transferase	Residues 1 to 389 of 389 are 99 pct identical to residues 1 to 389 of a 389 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287917.1 putative heat shock protein	Putative uncharacterized protein	Hypothetical transmembrane protein	Similar to putative heat shock protein YciM of Escherichia coli	similar to unknown protein hypothetical protein	conserved gene TPR domain protein (heat shock protein) N-acetylglucosaminyl transferase	similar to unknown protein hypothetical protein	
ECOLI01239	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	
ECOLI01240	Uncharacterized protein yciH	Uncharacterized protein sll0546	Uncharacterized protein HI1225	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Sui1 family protein	Uncharacterized protein yciH	Alr3795 protein	Putative uncharacterized protein	Putative translation initiation factor SUI1	putative Sui1 family protein	Protein yciH	Sui1	Translation initiation factor, putative	Putative translation initiaiton factor	Translation initiation factor SUI1, putative	putative translation initiaiton factor	Sui1 family protein	Putative uncharacterized protein yciH	Translation initiation factor 1 related protein	Residues 1 to 109 of 109 are 97 pct identical to residues 1 to 109 of a 109 aa protein from Escherichia coli K12 ref: NP_415798.1 orf, conserved hypothetical protein	Translation initiation factor SUI1 family protein	Similar to probable translation initiation factor YciH of Escherichia coli	Putative uncharacterized protein	Translation initiation factor SUI1	IPR001950: Translation initiation factor SUI1 putative translation initiation factor SUI1	similar to Salmonella typhi CT18 putative translation initiaiton factor putative translation initiaiton factor	Translation initiation factor SUI1 family protein	
ECOLI01241	Osmotically-inducible lipoprotein B	Osmotically inducible lipoprotein B	Osmotically-inducible lipoprotein B precursor	Osmotically inducible lipoprotein B	Osmotically inducible lipoprotein B	Osmotically inducible lipoprotein B	Osmotically inducible lipoprotein B	Lipoprotein, putative	Osmotically-inducible lipoprotein B	Residues 1 to 72 of 72 are 100 pct identical to residues 1 to 72 of a 72 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287914.1 osmotically inducible lipoprotein	Osmotically inducible lipoprotein B	Osmotically inducible lipoprotein	osmotically inducible lipoprotein	similar to Salmonella typhi CT18 osmotically inducible lipoprotein B precursor osmotically inducible lipoprotein B precursor	Osmotically inducible lipoprotein B	Hypothetical protein	Osmotically-inducible lipoprotein B	hypothetical protein	osmotically inducible lipoprotein	osmotically inducible lipoprotein	osmotically inducible lipoprotein	osmotically inducible lipoprotein	hypothetical protein	lipoprotein, putative	Osmotically inducible lipoprotein B	Osmotically inducible lipoprotein B precursor	osmotically inducible lipoprotein	Osmotically inducible lipoprotein	17 kDa surface antigen	
ECOLI01242	Uncharacterized HTH-type transcriptional regulator yciT	Hypothetical transcriptional regulator yciT	Transcriptional regulator, DeoR family	Putative DEOR-type transcriptional regulator	Residues 1 to 249 of 249 are 99 pct identical to residues 1 to 249 of a 249 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287913.1 putative DEOR-type transcriptional regulator	Transcription regulator	Transcriptional regulator	IPR001034: Bacterial regulatory protein, DeoR family putative regulatory protein, deoR family	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	Putative deoR family regulatory protein	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	Putative regulatory protein YciT, DeoR family	Putative DEOR-type transcriptional regulator	putative HTH-type transcriptional regulator YciT identified by match to protein family HMM PF00455; match to protein family HMM PF01022; match to protein family HMM PF08220	Transcriptional regulator, DeoR family	Putative DeoR-family regulatory protein	Hypothetical protein	putative DEOR-type transcriptional regulator Code: KG; COG: COG1349	putative DEOR-type transcriptional regulator	Transcriptional regulator, DeoR family	Putative DEOR-type transcriptional regulator	Putative uncharacterized protein	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	
ECOLI01243	UPF0509 protein yciZ	Hypothetical protein	UPF0509 protein yciZ	Residues 1 to 60 of 60 are 96 pct identical to residues 1 to 60 of a 60 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287912.1 orf, conserved hypothetical protein	conserved hypothetical protein	hypothetical protein	orf conserved hypothetical protein	UPF0509 protein yciZ	UPF0509 protein yciZ	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	UPF0509 protein yciZ	Putative uncharacterized protein	UPF0509 protein ESA_01586	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved domain protein	Conserved domain protein	Conserved domain protein	Putative uncharacterized protein	Conserved domain protein	Putative uncharacterized protein	Conserved domain protein	Putative uncharacterized protein	
ECOLI01244	Protein gmr	Putative uncharacterized protein	Sensory box/GGDEF family protein	GGDEF family protein	Putative uncharacterized protein STY1349	Sensory box/GGDEF family protein	Sensory box/GGDEF family protein	Hypothetical protein yciR	Response regulator/sensory box/GGDEF domain/EAL domain protein	Sensory box protein/response regulator	hypothetical conserved protein	Putative uncharacterized protein VP0092	Putative uncharacterized protein yciR	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1787541 (662 aa). BLAST with identity of 98% in 658 aa. This CDS contains deletion. The sequence has been checked and is believed to be correct. pseudo	Diguanylate cyclase/phosphodiesterase domain 2	Putative signal transduction eal-ggdef domains transmembrane protein	hypothetical protein	Putative uncharacterized protein	Sensory box/GGDEF family protein	IPR000014: PAS domain; IPR000160: GGDEF; IPR001633: EAL domain putative PAS/PAC domain; diguanylate cyclase/phosphodiesterase domain 1; Diguanylate cyclase/phosphodiesterase domain 2	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Intracellular signaling protein (2 PAS, GGDEF,EAL domains)	Putative PAS/PAC domain protein	conserved hypothetical protein	identified by similarity to OMNI:SO0341; match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 sensory box/GGDEF/EAL domain protein	PAS:GGDEF	PAS:GGDEF	PAS sensor diguanylate cyclase/phophodiesterase	Putative response regulator	
ECOLI01245	Exoribonuclease 2	Exoribonuclease 2	Exoribonuclease 2	Exoribonuclease 2	putative exoribonuclease II	Exoribonuclease 2	Exoribonuclease 2	Exoribonuclease 2	Exoribonuclease 2	Exoribonuclease 2	Exoribonuclease 2	Exoribonuclease 2	Exoribonuclease 2	Residues 1 to 644 of 644 are 99 pct identical to residues 1 to 644 of a 644 aa protein from Escherichia coli K12 ref: NP_415802.1 RNase II, mRNA degradation	Exoribonuclease 2	Exoribonuclease 2	IPR001900: Ribonuclease II RNase II, mRNA degradation	similar to Salmonella typhi CT18 exoribonuclease II exoribonuclease II	Exoribonuclease 2	exoribonuclease II	ribonuclease II; RNase II; Similar to: HI1733, RNB_HAEIN exoribonuclease II	Exoribonucleases VacB protein	Exoribonuclease 2	Exoribonuclease 2	ribonuclease II	mRNA degradation; Code: K; COG: COG4776 RNase II	mRNA degradation; Code: K; COG: COG4776 RNase II	exoribonuclease II	Ribonuclease II	
ECOLI01246	Uncharacterized protein yciW	Hypothetical protein yciW	Putative oxidoreductase	Residues 1 to 401 of 401 are 96 pct identical to residues 1 to 401 of a 401 aa protein from Escherichia coli O157:H7 ref: NP_309887.1 putative oxidoreductase	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	Code: S; COG: COG4950 putative oxidoreductase	Code: S; COG: COG2128 putative oxidoreductase	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yciW	uncharacterized peroxidase-related enzyme TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme PFAM: Carboxymuconolactone decarboxylase KEGG: rso:RSc1888 hypothetical protein	Hypothetical protein	Hypothetical protein	putative oxidoreductase	Hypothetical protein	conserved hypothetical protein	uncharacterized peroxidase-related enzyme TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme PFAM: Carboxymuconolactone decarboxylase KEGG: rso:RSc1888 hypothetical protein	Putative oxidoreductase	Putative oxidoreductase	Putative uncharacterized protein	Uncharacterized peroxidase-related enzyme	Predicted oxidoreductase	Putative uncharacterized protein	Putative uncharacterized protein	Putative oxidoreductase	
ECOLI01247	Enoyl-[acyl-carrier-protein] reductase	Enoyl-(Acyl-carrier-protein) reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-(Acyl-carrier-protein) reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-(Acyl-carrier-protein) reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	FabI	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-acyl carrier protein reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-(Acyl-carrier-protein) reductase	Probable enoyl-[acyl-carrier-protein] reductase	Lmo0970 protein	Enoyl-[ACP] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-[acyl-carrier-protein] reductase	Enoyl-(Acyl-carrier-protein) reductase	Enoyl-[acyl-carrier-protein] reductase	identified by match to protein family HMM PF00106 enoyl-(acyl-carrier-protein) reductase	
ECOLI01248	Uncharacterized protein ycjD	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	All1265 protein	Putative uncharacterized protein	best DB hits: BLAST: pir:A81035; conserved hypothetical protein NMB1852 [imported] -; E=2e-18 gb:AAC78448.1; (AF029361) similar to E. coli ORF, encoded by; E=7e-18 gb:AAC78450.1; (AF029362) similar to E. coli ORF, encoded by; E=2e-17 COG: NMB1852; COG2852 Uncharacterized BCR; E=2e-19 conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Residues 1 to 117 of 117 are 94 pct identical to residues 1 to 117 of a 117 aa protein from Escherichia coli K12 ref: NP_415805.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein	Conserved domain protein	Similar to: HI0925, Y925_HAEIN conserved hypothetical protein	conserved hypothetical protein	Best Blastp Hit: gb|AAC78450.1| (AF029362) similar to E. coli ORF, encoded by GenBank Accession Number X97282; and to H. influenzae protein HI0925, encoded by GenBank Accession Number U32774; and to H. influenzae protein HI1162, encoded by GenBank Accession Number U32796 [Neisseria g> conserved hypothetical protein	Code: S; COG: COG2852 conserved hypothetical protein	Putative uncharacterized protein	Code: S; COG: COG2852 conserved hypothetical protein	Protein of unknown function DUF559	protein of unknown function DUF559	Protein of unknown function DUF559	conserved hypothetical protein	hypothetical protein COG2852 Uncharacterized protein conserved in bacteria	protein of unknown function DUF559	conserved hypothetical protein Hypothetical protein ycjD,50% identity(65% similarity) to SwissProt;P45736. Has PF04480, Protein of unknown function (DUF559);IPR007569; No SIgnal Peptide or TMH present. vsr: DNA mismatch endonuclease (vsr)	Putative restriction endonuclease-like	conserved hypothetical protein Code: S; COG: COG2852	
ECOLI01249	Peptide transport system ATP-binding protein sapF	Peptide transport system ATP-binding protein SapF	putative ABC-type antimicrobial peptide transport system, ATPase component	Peptide transport system ATP-binding protein sapF	Peptide ABC transporter, ATP-binding protein	Peptide transport system ATP-binding protein	Peptide ABC transporter, ATP-binding protein	Putative ATP-binding protein of peptide transport system	Residues 1 to 268 of 268 are 100 pct identical to residues 1 to 268 of a 268 aa protein from Escherichia coli K12 ref: NP_415806.1 putative ATP-binding protein of peptide transport system	Peptide transport system ATP-binding protein	Peptide transport system ATP-binding protein SapF	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp-binding), peptide transport protein	similar to Salmonella typhi CT18 peptide transport system ATP-binding protein SapF peptide transport system ATP-binding protein SapF	ABC peptide transporter, ATP-binding subunit sapF	Peptide transport system ATP-binding protein sapF	identified by similarity to SP:P36638; match to protein family HMM PF00005 peptide ABC transporter, ATP-binding protein	peptide transport system ATP-binding protein SapF	Code: V; COG: COG4167 putative ATP-binding protein of peptide transport system	Code: V; COG: COG4167 putative ATP-binding protein of peptide transport system	peptide ABC transporter ATP-binding component	Code: V; COG: COG4167 putative ATP-binding protein of peptide transport system	Peptide transport system ATP-binding protein SapF	Peptide transport system ATP-binding protein	Peptide transport system ATP-binding protein sapF	Peptide transport system ATP-binding protein	Peptide transport system ATP-binding protein	ABC-type peptide transporter, ATP-binding protein	putative ATP-binding protein of peptide transport system Code: V; COG: COG4167	Peptide transport system ATP-binding protein	
ECOLI01250	Peptide transport system ATP-binding protein sapD	SapD	ABC-type antimicrobial peptide transport system, ATPase component	Peptide transport system ATP-binding protein SapD	putative peptide ABC transporter, ATP-binding protein	Peptide transport system ATP-binding protein sapD	Peptide ABC transporter, ATP-binding protein	Peptide ABC transporter, ATP-binding protein	Peptide transport system ATP-binding protein	Peptide ABC transporter, ATP-binding protein	Peptide transport system ATP-binding protein sapD	ABC-type antimicrobial peptide transport system, ATPase component	Residues 1 to 330 of 330 are 100 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287897.1 putative ATP-binding protein of peptide transport system	Peptide transport system ATP-binding protein	Peptide transport system ATP-binding protein SapD	InterProMatches:IPR003439; Molecular Function: ATP-binding cassette (ABC) transporter activity (GO:0004009), Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) ABC transporter (ATP-binding protein)	IPR003439: ABC transporter ABC superfamily (atp-binding), peptide transport protein	similar to Salmonella typhi CT18 peptide transport system ATP-binding protein SapD peptide transport system ATP-binding protein SapD	identified by match to PFAM protein family HMM PF00005 peptide ABC transporter, ATP-binding protein	ABC peptide transporter, ATP-binding subunit sapD	peptide transport system ATP-binding protein SapD	Similar to: HI1641, SAPD_HAEIN ABC-type transport system, ATP binding component, involved in antimicrobial peptide resistance	ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component DppD protein	ABC-type antimicrobial peptide transport system, ATPase component	Peptide transport system ATP-binding protein sapD	identified by similarity to SP:P36636; match to protein family HMM PF00005; match to protein family HMM TIGR01727 peptide ABC transporter, ATP-binding protein	peptide transport system ATP binding protein SapD	identified by match to protein family HMM PF00005 peptide/opine/nickel uptake (PepT) family ABC transporter, ATP-binding protein	Code: V; COG: COG4170 putative ATP-binding protein of peptide transport system	
ECOLI01251	Peptide transport system permease protein sapC	SapC	ABC-type antimicrobial peptide transport system, permease component	Peptide transport system permease protein sapC	putative peptide ABC transporter, permease protein	Peptide transport system permease protein sapC	Peptide ABC transporter, permease protein	Peptide ABC transporter, permease protein	Peptide transport system permease protein	Homolog of Salmonella peptide transport permease protein	ABC-type antimicrobial peptide transport system, permease component	Residues 1 to 296 of 296 are 100 pct identical to residues 1 to 296 of a 296 aa protein from Escherichia coli K12 ref: NP_415808.1 homolog of Salmonella peptide transport permease protein	Peptide transport system permease protein	Peptide transport system permease protein SapC	ABC superfamily (membrane), peptide transport protein	similar to Salmonella typhi CT18 peptide transport system permease protein SapC peptide transport system permease protein SapC	ABC peptide transporter, permease subunit sapC	peptide transport system permease protein SapC	Similar to: HI1640, SAPC_HAEIN ABC-type transport system, permease protein, involved in antimicrobial peptide resistance	ABC-type antimicrobial peptide transport system, permease component	Peptide transport system permease protein sapC	peptide transport system permease protein SapC	similar to Salmonella peptide transport periplasmic protein; Code: V; COG: COG4171 peptide transport permease protein-like protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter peptide transport protein (ABC superfamily, membrane)	siimilar to Salmonella peptide transport permease protein; Code: V; COG: COG4171 SapC	peptide ABC transporter permease component	similar to Salmonella peptide transport permease protein; Code: V; COG: COG4171 SapC	Peptide transport system permease protein SapC	Binding-protein-dependent transport systems inner membrane component	
ECOLI01252	Peptide transport system permease protein sapB	ABC-type antimicrobial peptide transport system, permease component	Peptide transport system permease protein sapB	putative peptide ABC transporter, permease protein	Peptide transport system permease protein sapB	Peptide ABC transporter, permease protein	Peptide transport system permease protein	Peptide ABC transporter, permease protein	Peptide transport system permease protein sapB	ABC-type antimicrobial peptide transport system, permease component	Residues 1 to 321 of 321 are 99 pct identical to residues 1 to 321 of a 321 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287895.1 homolog of Salmonella peptide transport permease protein	Peptide transport system permease protein	Peptide transport system permease protein SapB	ABC superfamily (membrane), peptide transport protein	similar to Salmonella typhi CT18 peptide transport system permease protein SapB peptide transport system permease protein SapB	ABC peptide transporter, permease subunit sapB	Similar to: HI1639, SAPB_HAEIN ABC-type transport system, permease protein, involved in antimicrobial peptide resistance	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components DppB protein	Peptide transport system permease protein sapB	identified by similarity to SP:P36668; match to protein family HMM PF00528 peptide ABC transporter, permease protein	similar to Salmonella peptide transport periplasmic protein; Code: V; COG: COG4168 peptide transport permease protein-like protein	identified by match to protein family HMM PF00528 peptide ABC transporter, permease protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter peptide transport protein (ABC superfamily, membrane)	similar to Salmonella peptide transport periplasmic protein; Code: V; COG: COG4168 SapB	peptide ABC transporter permease component SapB	similar to Salmonella peptide transport permease protein; Code: V; COG: COG4168 SapB	Peptide transport system permease protein SapB	Binding-protein-dependent transport systems inner membrane component precursor	Peptide transport system permease protein precursor	
ECOLI01253	Peptide transport periplasmic protein sapA	Peptide transport periplasmic protein sapA	Peptide transport periplasmic protein	Peptide ABC transporter, periplasmic peptide- binding protein	Homolog of Salmonella peptide transport periplasmic protein	Residues 1 to 547 of 547 are 99 pct identical to residues 1 to 547 of a 547 aa protein from Escherichia coli K12 ref: NP_415810.1 homolog of Salmonella peptide transport periplasmic protein	Peptide transport periplasmic protein	Peptide transport periplasmic protein SapA	IPR000914: Bacterial extracellular solute-binding protein, family 5 ABC superfamily (periplasm), peptide transport protein	similar to Salmonella typhi CT18 peptide transport periplasmic protein SapA precursor peptide transport periplasmic protein SapA precursor	ABC transporter, periplasmic peptide binding protein sapA	ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components OppA protein	Peptide transport periplasmic protein sapA	peptide transport periplasmic protein SapA	similar to Salmonella peptide transport periplasmic protein; Code: E; COG: COG4166 peptide transport periplasmic protein-like protein	similar to Salmonella peptide transport periplasmic protein; Code: E; COG: COG4166 SapA	peptide ABC transporter periplasmic component SapA	similar to Salmonella peptide transport periplasmic protein; Code: E; COG: COG4166 SapA	Peptide transport periplasmic protein SapA	Peptide transport periplasmic protein precursor	Peptide transport periplasmic protein SapA	Peptide ABC transporter, periplasmic-binding protein	Peptide transport periplasmic protein precursor	Peptide transport periplasmic protein precursor	peptide transport periplasmic protein Code: E; COG: COG4166	Peptide transport periplasmic protein precursor	ABC dipeptide transporter extracellular solute-binding protein, family 5 PFAM: extracellular solute-binding protein, family 5 KEGG: pat:Patl_3006 extracellular solute-binding protein, family 5	peptide transport periplasmic protein SapA precursor	Extracellular solute-binding protein, family 5 precursor	
ECOLI01254	Uncharacterized protein ymjA	Putative uncharacterized protein	Putative uncharacterized protein ymjA	Residues 1 to 81 of 81 are 100 pct identical to residues 1 to 81 of a 81 aa protein from Escherichia coli K12 ref: NP_415811.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ymjA	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ymjA	Putative uncharacterized protein ymjA	Putative uncharacterized protein ymjA	Putative uncharacterized protein ymjA	Putative uncharacterized protein ymjA	Predicted protein	Putative uncharacterized protein ymjA	YmjA protein	
ECOLI01255	Putrescine importer	Probable amino acid permease	Amino acid permease	Putative amino acid/amine transport protein	Residues 1 to 479 of 479 are 99 pct identical to residues 1 to 479 of a 479 aa protein from Escherichia coli O157:H7 ref: NP_309900.1 putative amino acid-amine transport protein	amino acid transporter	predicted amino acid permease conserved Archaeal membrane protein	Amino acid transporter, putative	go_component: plasma membrane [goid 0005886]; go_function: choline transporter activity [goid 0015220]; go_process: choline transport [goid 0015871] GABA permease, putative	Code: E; COG: COG0531 putative amino acid/amine transport protein	Code: E; COG: COG0531 putative amino acid/amine transport protein	transcript_id=ENSDNOT00000014158	Amino acid permease	amino acid permease identified by match to protein family HMM PF00324	Amino acid permease	putative lysine-specific permease	putative amino acid transport protein (APC family) Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	putative amino acid/amine transport protein Code: E; COG: COG0531	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: she:Shewmr4_3458 amino acid permease-associated region	Botrytis cinerea hypothetical protein	Amino acid permease-associated region	Amino acid permease-associated region	Amino acid permease-associated region	Amino acid permease-associated region	PFAM: amino acid permease-associated region KEGG: spc:Sputcn32_0587 amino acid permease-associated region amino acid permease-associated region	Putative amino acid/amine transport protein	Amino acid permease	Amino acid permease-associated region	Probable amino acid permease	
ECOLI01256	Gamma-glutamylputrescine synthetase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE HOMOLOGOUS TO A GLUTAMINE SYNTHETASE PROTEIN	Putative glutamine synthetase	Putative glutamine synthetase	glutamine synthetase	Residues 1 to 498 of 498 are 96 pct identical to residues 1 to 498 of a 498 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287891.1 putative glutamine synthetase	identified by match to protein family HMM PF00120 glutamine synthetase family protein	Glutamine synthetase protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark glutamine synthase	Glutamine synthase	glutamine synthase	identified by match to protein family HMM PF00120 glutamine synthetase family protein	identified by match to protein family HMM PF00120 glutamine synthetase	Glutamate--ammonia ligase	Code: E; COG: COG0174 putative glutamine synthetase	probable glutamine synthetase	Code: E; COG: COG0174 putative glutamine synthetase	glutamine synthetase protein	Glutamate--ammonia ligase	Glutamate--ammonia ligase	Code: E; COG: COG0174 putative glutamine synthetase	putative glutamine synthetase similarity:fasta; with=UniProt:GLNA_BACCE (EMBL:BCGLNA); Bacillus cereus.; glnA; Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase).; length=443; id 28.453; 362 aa overlap; query 55-407; subject 33-377 similarity:fasta; with=UniProt:Q8P895; Xanthomonas campestris (pv. campestris).; glnA; Glutamine synthase.; length=459; id 41.215; 461 aa overlap; query 1-457; subject 1-456	putative glutamine synthase	Glutamate--ammonia ligase PFAM: glutamine synthetase, catalytic region: (2.3e-96) KEGG: rsp:RSP_0375 probable glutamine synthetase, ev=1e-153, 61% identity	probable glutamine synthetase protein similar to glnA (XCC2348) [Xanthomonas campestris pv. campestris str. ATCC 33913] and mll7254[Mesorhizobium loti] Similar to swissprot:Q8P895 Putative location:bacterial cytoplasm Psort-Score: 0.0796; go_function: glutamate-ammonia ligase activity [goid 0004356]; go_process: nitrogen metabolism [goid 0006807]; go_process: nitrogen fixation [goid 0009399]	glutamine synthase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Glutamate--ammonia ligase PFAM: glutamine synthetase, catalytic region KEGG: rsp:RSP_0375 probable glutamine synthetase	glutamine synthetase, putative	Glutamate--ammonia ligase	
ECOLI01257	Gamma-glutamyl-gamma-aminobutyrate hydrolase	Glutamine amidotransferase	Putative uncharacterized protein	Possible amidotransferase subunit	Putative uncharacterized protein	Probable glutamine amidotransferase	Putative uncharacterized protein	identified by match to PFAM protein family HMM PF00117 glutamine amidotransferase, class I	Putative uncharacterized protein	Putative glutamine amidotransferase	PMID: 3298209 best DB hits: BLAST: pir:E70885; hypothetical protein Rv2859c - Mycobacterium; E=2e-24 pir:C83609; probable glutamine amidotransferase PA0297 [imported] -; E=1e-19 pir:T36850; hypothetical protein SCI35.37 - Streptomyces coelicolor; E=1e-17 COG: Rv2859c; COG2071 Predicted glutamine amidotransferases; E=2e-25 PFAM: PF00117; Glutamine amidotransferase class-I; E=8.7e-05 probable glutamine amidotransferase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Glutamine amidotransferase, putative	Putative glutamine amidotransferase, class I	Glutamine amidotransferase, class I	ANTHRANILATE SYNTHASE COMPONENT II	Putative glutamine amidotransferase	Putative glutamine amidotransferase	Gamma-glutamyl-gamma-aminobutyrate hydrolase	Possible glutamine amidotransferase	Predicted glutamine amidotransferase	SCI35.37, unknown, len: 726 aa; similar to hypotheticals e.g. YCJL_ECOLI (258 aa), fasta scores; opt: 216 z-score: 265.7 E(): 1.5e-07, 31.8% identity in 201 aa overlap conserved hypothetical protein SCI35.37	Putative glutamine amidotransferase-like protein RP404	Residues 1 to 214 of 214 are 99 pct identical to residues 45 to 258 of a 258 aa protein from Escherichia coli K12 ref: NP_415814.1 probable amidotransferase subunit	Glutamine amidotransferase, class I	identified by similarity to GB:BAB51661.1 conserved hypothetical protein	Probable amidophosphoribosyltransferase	glutamine amidotransferase (class I), putative	Putative uncharacterized protein	
ECOLI01258	HTH-type transcriptional regulator puuR	Putative uncharacterized protein	Lmo0806 protein	Probable MerR-family transcriptional regulator	Probable MerR-family transcriptional regulator	Putative transcriptional regulator	Putative uncharacterized protein ycjC	Predicted transcriptional regulator	Lin0796 protein	Residues 1 to 185 of 185 are 100 pct identical to residues 1 to 185 of a 185 aa protein from Escherichia coli K12 ref: NP_415815.1 orf, conserved hypothetical protein	Putative transcription regulator protein	identified by match to protein family HMM PF01381 DNA-binding protein	identified by match to protein family HMM PF01381; match to protein family HMM PF07883 putative transcriptional regulator	Code: K; COG: COG1396 conserved hypothetical protein	Code: K; COG: COG1396 conserved hypothetical protein	Cupin 2, conserved barrel	Code: K; COG: COG1396; orf conserved hypothetical protein	transcriptional regulator, Cro/CI family identified by match to protein family HMM PF01381; match to protein family HMM PF07883	Transcriptional regulator	Complete genome	conserved hypothetical protein Code: K; COG: COG1396	Transcriptional regulator	Cupin 2 conserved barrel domain protein	Transcriptional regulator, XRE family	Helix-turn-helix domain protein	Putative oxidoreductase/putative regulator	Transcriptional regulator PuuR	Cupin 2, conserved barrel domain protein	Transcriptional regulator, XRE family	
ECOLI01259	Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase	Aldehyde dehydrogenase	Putative aldehyde dehydrogenase	Aldehyde dehydrogenase, prefers NADP over NAD	Residues 33 to 527 of 527 are 98 pct identical to residues 1 to 495 of a 495 aa protein from Escherichia coli K12 ref: NP_415816.1 aldehyde dehydrogenase, prefers NADP over NAD	identified by match to protein family HMM PF00171 aldehyde dehydrogenase family protein	Aldehyde dehydrogenase protein	Aldehyde dehydrogenase family protein	identified by match to protein family HMM PF00171 aldehyde dehydrogenase family protein	identified by similarity to SP:P23883; match to protein family HMM PF00171 aldehyde dehydrogenase family protein	prefers NADP over NAD; Code: C; COG: COG1012 aldehyde dehydrogenase	Aldehyde dehydrogenase family protein	prefers NADP over NAD; Code: C; COG: COG1012 aldehyde dehydrogenase	Aldehyde dehydrogenase (NAD+)	Aldehyde dehydrogenase (NAD+)	Aldehyde dehydrogenase	Aldehyde dehydrogenase (NAD+)	Betaine-aldehyde dehydrogenase PFAM: aldehyde dehydrogenase: (3e-218) KEGG: jan:Jann_3507 aldehyde dehydrogenase, ev=0.0, 68% identity	aldehyde dehydrogenase family protein identified by match to protein family HMM PF00171	Aldehyde dehydrogenase	Aldehyde dehydrogenase	Betaine-aldehyde dehydrogenase	Aldehyde dehydrogenase	Aldehyde dehydrogenase (NAD+)	Aldehyde dehydrogenase (NAD(+)) PFAM: aldehyde dehydrogenase KEGG: bcn:Bcen_2376 aldehyde dehydrogenase (NAD+)	Aldehyde dehydrogenase	putative aldehyde dehydrogenase identified by match to protein family HMM PF00171	aldehyde dehydrogenase family protein identified by match to protein family HMM PF00171	Putative aldehyde dehydrogenase	
ECOLI01260	Gamma-glutamylputrescine oxidoreductase	Oxidoreductase	Putative oxidoreductase	Probable oxidoreductase	Residues 1 to 426 of 426 are 98 pct identical to residues 1 to 426 of a 426 aa protein from Escherichia coli K12 ref: NP_415817.1 probable oxidoreductase	FAD dependent oxidoreductase superfamily	D-amino acid oxidase family protein	Code: E; COG: COG0665 probable oxidoreductase	Code: E; COG: COG0665 probable oxidoreductase	FAD dependent oxidoreductase	Code: E; COG: COG0665 probable oxidoreductase	probable oxidoreductase Code: E; COG: COG0665	Botrytis cinerea hypothetical protein	Probable oxidoreductase OrdL	FAD dependent oxidoreductase	Probable oxidoreductase	Gamma-glutamylputrescine oxidoreductase	FAD dependent oxidoreductase	FAD dependent oxidoreductase	Gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding	Gamma-glutamylputrescine oxidoreductase	FAD dependent oxidoreductase	Gamma-glutamylputrescine oxidoreductase	jgi|Lacbi1|316202|eu2.Lbscf0070g00460	Putative uncharacterized protein	Gamma-glutamylputrescine oxidoreductase	Gamma-glutamylputrescine oxidoreductase	Gamma-glutamylputrescine oxidoreductase	Putative oxidoreductase	
ECOLI01261	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	Product confidence : putative Gene name confidence : putative putative 4-aminobutyrate aminotransferase protein	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	Residues 1 to 421 of 421 are 99 pct identical to residues 1 to 421 of a 421 aa protein from Escherichia coli K12 ref: NP_415818.1 4-aminobutyrate aminotransferase	Probable 4-aminobutyrate aminotransferase protein	4-aminobutyrate aminotransferase	4-aminobutyrate transaminase	4-aminobutyrate transaminase	InterProMatches:IPR004632; Molecular Function: 4-aminobutyrate transaminase activity (GO:0003867), Biological Process: aminobutyrate metabolism (GO:0009448) 4-aminobutyrate aminotransferase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme 4-aminobutyrate aminotransferase, PLP-dependent	identified by similarity to SP:P22256; match to protein family HMM PF00202; match to protein family HMM TIGR00700 4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	Code: E; COG: COG0160 4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase Also similar to BAV2199, (67.952 38d.)	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	putative 4-aminobutyrate aminotransferase similarity:fasta; with=UniProt:GOAG_ECOLI (EMBL:A64879); Escherichia coli.; goaG; 4-aminobutyrate aminotransferase (EC 2.6.1.19) (Gamma-amino-N-butyrate transaminase) (GABA transaminase) (Glutamate:succinic semialdehyde transaminase) (GABA aminotransferase) (GABA-AT).; length=421; id 61.575; 419 aa overlap; query 1-419; subject 1-419 similarity:fasta; with=UniProt:Q9AGD3 (EMBL:AF335502); Rhizobium leguminosarum.; gabT; 4-aminobutyrate aminotransferase (EC 2.6.1.19).; length=E ( 426; id 100.000; 426 aa overlap; query 1-426; subject 1-426	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase TIGRFAM: 4-aminobutyrate aminotransferase: (5.6e-231) PFAM: aminotransferase class-III: (2e-152) KEGG: sil:SPOA0274 4-aminobutyrate aminotransferase, ev=0.0, 83% identity	
ECOLI01262	Psp operon transcriptional activator	Transcriptional regulator	Psp operon transcriptional activator PspF	putative psp operon transcriptional activator	Psp operon transcriptional activator	Psp operon transcriptional activator	Psp operon transcriptional activator	Psp operon transcriptional activator	Psp operon transcriptional activator	Sigma-54-binding protein	Psp operon transcriptional activator	Psp operon transcriptional activator	Transcriptional regulator	Residues 1 to 330 of 330 are 98 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287885.1 psp operon transcriptional activator	Psp operon transcriptional activator	Psp operon transcriptional activator PspF	IPR002078: Sigma-54 factor interaction domain; IPR002197: Helix-turn-helix, Fis-type transcription activator	similar to Salmonella typhi CT18 psp operon transcriptional activator PspF psp operon transcriptional activator PspF	Transcriptional regulator	Psp operon transcriptional activator	containing an AAA-type ATPase; COG1221 transcriptional regulator	psp operon transcriptional activator	Sigma-54 dependent transcriptional regulator	Transcriptional regulator, AtoC family (AAA,HTH domains)	Transcription activator	Psp operon transcriptional activator PspF	identified by similarity to SP:P37344; match to protein family HMM PF00158; match to protein family HMM TIGR01199 sigma-54 depedent transcriptional activator PspF	identified by similarity to SP:P17899; match to protein family HMM PF00158 sigma-54-binding protein	identified by similarity to SP:P17899; match to protein family HMM PF00158 sigma-54-binding protein	
ECOLI01263	Phage shock protein A	Phage shock protein A	Phage shock protein A	Uncharacterized protein sll0617	Putative phage shock protein A	Putative uncharacterized protein	Similar to chloroplast membrane-associated 30 kD protein	Phage shock protein A	Phage shock protein A homolog	Phage shock protein A	Phage shock protein A	Putative uncharacterized protein	Phage shock protein A	Phage shock protein A	putative phage shock protein A	Phage shock protein A	identified by match to protein family HMM PF04012 conserved hypothetical protein	Phage shock protein A	Phage shock protein A	Phage shock protein A	Phage shock protein A	unknown protein	hypothetical conserved protein	Phage shock protein A	Phage shock protein A	Phage shock protein A	CDS_ID OB0940; membrane protein phage shock protein A	Phage shock protein A	Phage shock protein A	
ECOLI01264	Phage shock protein B	Phage shock protein B	phage shock protein B	Phage shock protein B	Phage shock protein B	Phage shock protein B	Phage shock protein B	Phage shock protein B	Phage shock protein B	Phage shock protein B	Residues 1 to 74 of 74 are 98 pct identical to residues 1 to 74 of a 74 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287883.1 phage shock protein, putative inner membrane protein	Phage shock protein B	Phage shock protein B	phage shock protein; regulatory gene, activates expression of psp operon with PspC	similar to Salmonella typhi CT18 phage shock protein B phage shock protein B	Phage shock protein B	phage shock protein B	Phage shock protein B	Phage shock protein	identified by similarity to SP:P23854; match to protein family HMM PF06667 phage shock protein B	phage shock protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator regulatory gene for expression of the psp operon with PspC, phage shock protein	phage shock protein	probable phage shock protein B	phage shock protein	Phage shock B	Phage shock protein B	Phage shock B	Phage shock B family protein	
ECOLI01265	Phage shock protein C	Phage shock protein C	hypothetical phage shock protein C	Phage shock protein C	Phage shock protein C	Phage shock protein C	Phage shock protein C	Phage shock protein C	Phage shock protein C	Putative stress-responsive transcriptional regulator	Residues 1 to 119 of 119 are 100 pct identical to residues 1 to 119 of a 119 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287882.1 phage shock protein: activates phage shock-protein expression	Phage shock protein C	Phage shock protein C	phage shock protein; regulatory gene, activates expression of psp operon with PspB	similar to Salmonella typhi CT18 phage shock protein C phage shock protein C	Phage shock protein C	stress-responsive transcriptional regulator PspC	Phage shock protein	identified by similarity to SP:P23855; match to protein family HMM PF04024 phage shock protein C	activates phage shock-protein expression; Code: KT; COG: COG1983 phage shock protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator transcriptional activator of the psp operon with PspB, phage shock protein	activates phage shock-protein expression; Code: KT; COG: COG1983 phage shock protein	phage shock protein pspC putative stress-responsive transcriptional regulator; COG1983	activates phage shock-protein expression; Code: KT; COG: COG1983 phage shock protein	Phage shock protein C	PspC	Phage shock protein C, PspC	Phage shock protein C	Phage shock protein C, PspC	
ECOLI01266	Phage shock protein D	Phage shock protein D	Phage shock protein D	Residues 5 to 77 of 77 are 98 pct identical to residues 1 to 73 of a 73 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287881.1 phage shock protein	phage shock protein	similar to Salmonella typhi CT18 phage shock protein D phage shock protein D	Phage shock protein	phage shock protein	phage shock protein	phage shock protein	Phage shock protein D	Phage shock protein D	phage shock protein	Phage shock protein D	Phage shock protein	Putative uncharacterized protein	Phage shock protein PspD	Peripheral inner membrane phage-shock protein	Phage shock protein PspD	Phage shock protein PspD	Phage shock protein PspD	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Phage shock protein PspD	Phage shock protein D	Phage shock protein D	Phage shock protein PspD	Phage shock protein PspD	
ECOLI01267	Phage shock protein E	Phage shock protein E	Rhodanese-like domain protein	Phage shock protein	Phage shock protein E	Phage shock protein E	Phage shock protein	Rhodanese-related sulfurtransferase	Residues 14 to 115 of 115 are 99 pct identical to residues 3 to 104 of a 104 aa protein from Escherichia coli K12 ref: NP_415824.1 phage shock protein	hypothetical protein	IPR001763: Rhodanese-like phage shock protein	similar to Salmonella typhi CT18 phage shock protein E precursor phage shock protein E precursor	Putative periplasmic protein	rhodanese-related sulfurtransferases	hypothetical protein	Phage shock protein	Code: P; COG: COG0607 phage shock protein	Code: P; COG: COG0607 phage shock protein	Code: P; COG: COG0607 phage shock protein	Phage shock protein E	Conserved hypothetical protein	transcriptional regulator, MerR family	Rhodanese-like	hypothetical protein similarity to COG0607 Rhodanese-related sulfurtransferases	Rhodanese domain protein precursor	Phage shock protein E	Rhodanese domain protein	rhodanese-like domain protein identified by match to protein family HMM PF00581	Rhodanese domain protein	
ECOLI01268	Putative sucrose phosphorylase	Glycoside hydrolase family 13	Sucrose phosphorylase related protein	Lmo2735 protein	Putative sucrose phosphorylase	PMID: 1368718 best DB hits: BLAST: swissprot:P76041; SUCP_ECOLI PUTATIVE SUCROSE PHOSPHORYLASE; E=1e-123 pir:H64879; probable membrane protein b1309 - Escherichia coli; E=1e-123 ddbj:BAA14878.1; (D90768) Sucrose phosphorylase (EC 2.4.1.7); E=1e-121 COG: ycjM; COG0366 Glycosidases; E=1e-124 PFAM: PF00128; Alpha amylase, catalytic domain; E=0.0025 sucrose phosphorylase	Putative polysaccharide hydrolase	Lin2973 protein	Glycosidase	identified by similarity to SP:P76041; match to protein family HMM PF00128 sucrose phosphorylase	identified by similarity to SP:P33910; match to protein family HMM PF00128 putative sucrose phosphorylase	Alpha amylase, catalytic subdomain	Alpha amylase, catalytic subdomain	Alpha amylase, catalytic subdomain	sucrose phosphorylase	alpha amylase	Glycosidase COG0366	alpha amylase, catalytic region PFAM: alpha amylase, catalytic region: (8.7e-07) SMART: Alpha amylase, catalytic subdomain: (3.3e-09) KEGG: hch:HCH_00269 glycosidase, ev=1e-160, 48% identity	Putative sucrose phosphorylase	Alpha amylase, catalytic subdomain	Glycosidase	sucrose phosphorylase	Alpha amylase, catalytic region	Alpha amylase, catalytic region	Alpha amylase, catalytic region	Putative sucrose phosphorylase	sucrose phosphorylase	Glycoside hydrolase family 13	alpha amylase, catalytic region PFAM: alpha amylase, catalytic region SMART: alpha amylase, catalytic sub domain KEGG: sde:Sde_3210 sucrose phosphorylase	
ECOLI01269	Putative ABC transporter periplasmic-binding protein ycjN	Putative multiple sugar ABC transporter solute- binding protein	Putative uncharacterized protein	Lmo2839 protein	Putative extracellular solute-binding protein	Putative ABC transporter Periplasmic binding protein ycjN	putative extracellular solute binding protein	ABC transport protein, Solute-binding component	ABC transport protein, Solute-binding component	Product confidence : putative Gene name confidence : hypothetical putative sugar uptake ABC transporter periplasmic solute-binding protein precursor	ABC transport protein, Solute-binding component	sugar binding protein	Multiple sugar-binding protein	CDS_ID OB3123 sugar ABC transporter sugar-binding protein	sugar ABC transporter, periplasmic binding protein	SCBAC17A6.22c, possible binding protein dependent transport lipoprotein, len: 467aa; weakly similar to many eg. SW:P76042 (YCJN_ECOLI) putative ABC transporter from Escherichia coli (430 aa) fasta scores: opt: 346, Z-score: 385.6, 26.009% identity (29.668% ungapped) in 446 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1, Bacterial extracellular solute-binding protein and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site putative binding protein dependent transport lipoprotein	Sugar-binding periplasmic proteins/domains	Lin2972 protein	similar to Escherichia coli K12 putative transport periplasmic protein gi: 1787569 (431 aa). BLAST with identity of 95% in 428 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Putative sugar binding protein	identified by match to protein family HMM PF01547 ABC transporter, substrate-binding protein	sugar-binding protein	Code: G; COG: COG1653 putative transport periplasmic protein	extracellular solute-binding protein, family 1	extracellular solute-binding protein, family 1	ABC sugar transporter, periplasmic ligand binding protein	ABC-type sugar transport system, periplasmic component COG1653	putative mannitol-binding component of ABC transporter similarity:fasta; with=UniProt:O30491_PSEFL (EMBL:AF007800); Pseudomonas fluorescens.; mtlE; MtlE.; length=436; id 60.000; 430 aa overlap; query 8-436; subject 8-436 similarity:fasta; with=UniProt:Q92N02_RHIME (EMBL:SME591790); Rhizobium meliloti (Sinorhizobium meliloti).; PROBABLE SORBITOL-BINDING PERIPLASMIC PROTEIN.; length=436; id 86.697; 436 aa overlap; query 1-436; subject 1-436	Extracellular solute-binding protein, family 1	
ECOLI01270	Inner membrane ABC transporter permease protein ycjO	Hypothetical ABC transporter permease protein ycjO	Putative binding-protein dependent transport protein	Lin2971 protein	Residues 1 to 293 of 293 are 100 pct identical to residues 1 to 293 of a 293 aa protein from Escherichia coli K12 ref: NP_415827.1 putative binding-protein dependent transport protein	identified by similarity to SP:P77653; match to protein family HMM PF00528 ABC transporter, permease protein	Code: G; COG: COG1175 putative binding-protein dependent transport protein	Binding-protein-dependent transport system inner membrane component	Putative binding-protein dependent transport protein	Complete genome	putative binding-protein dependent transport protein Code: G; COG: COG1175	putative binding-protein dependent transport protein	Binding-protein-dependent transport systems inner membrane component precursor	Putative uncharacterized protein	Putative sugar ABC transporter, permease protein	Predicted sugar transporter subunit: membrane component of ABC superfamily	Putative sugar ABC transporter, permease protein	Binding-protein-dependent transport systems inner membrane component precursor	Putative sugar ABC transporter, permease protein	Putative uncharacterized protein	Putative sugar ABC transporter, permease protein	Putative ABC transporter permease component	ABC transporter, permease protein	Putative sugar transporter subunit: permease component of ABC superfamily transporter	Putative sugar transporter subunit: permease component of ABC superfamily transporter	Putative sugar transporter subunit: permease component of ABC superfamily transporter	Putative sugar transporter subunit: permease component of ABC superfamily transporter	Putative sugar ABC transporter permease protein	Predicted sugar transporter subunit: membrane component of ABC superfamily	
ECOLI01271	Inner membrane ABC transporter permease protein ycjP	Hypothetical ABC transporter permease protein ycjP	Putative transport system permease protein	SCBAC17A6.20c, possible integral membrane binding protein dependent transport protein, len: 294aa; similar to many eg. TR:BAB49483 (EMBL:AP002999) permease protein of sugar ABC transporter from Rhizobium loti (296 aa) fasta scores: opt: 608, Z-score: 696.1, 35.570% identity (36.934% ungapped) in 298 aa overlap. Contains Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component, Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and multiple hydrophobic possible membrane spanning regions. putative integral membrane binding protein dependent transport protein	Lin2970 protein	Residues 1 to 280 of 280 are 98 pct identical to residues 1 to 280 of a 280 aa protein from Escherichia coli K12 ref: NP_415828.1 putative transport system permease protein	identified by similarity to SP:P77716; match to protein family HMM PF00528 ABC transporter, permease protein	putative permease component of ABC transporter similarity:fasta; SWALL:Q92TX8 (EMBL:AL591985); Rhizobium meliloti; putative sugar uptake ABC transporter permease protein; length 299 aa; id=89.96; ungapped id=89.96; E()=1.7e-106; 299 aa overlap; query 2-300 aa; subject 1-299 aa	Binding-protein-dependent transport system inner membrane component	Hypothetical ABC transporter permease protein ycjP	Complete genome	putative transport system permease protein Code: G; COG: COG0395	hypothetical ABC transporter permease protein YcjP	Binding-protein-dependent transport systems inner membrane component precursor	Putative uncharacterized protein	Putative sugar ABC transporter, permease protein	Predicted sugar transporter subunit: membrane component of ABC superfamily	Putative sugar ABC transporter, permease protein	Binding-protein-dependent transport systems inner membrane component precursor	Putative sugar ABC transporter, permease protein	Putative uncharacterized protein	Binding-protein-dependent transport systems inner membrane component	Probable sugar ABC transporter, permease protein	Putative sugar ABC transporter, permease protein	Putative ABC transporter permease component	Inner membrane ABC transporter permease protein YcjP	Putative sugar transporter subunit: permease component of ABC superfamily transporter	Putative sugar transporter subunit: permease component of ABC superfamily transporter	Binding-protein-dependent transport systems inner membrane component	
ECOLI01272	Uncharacterized zinc-type alcohol dehydrogenase- like protein ycjQ	Hypothetical zinc-type alcohol dehydrogenase-like protein ycjQ	putative zinc-binding dehydrogenase	Putative oxidoreductase	SCBAC17A6.23, possible oxidoreductase, len: 381aa; similar to many eg. TR:Q9F1Z9 (EMBL:AB033991) BtrE from Bacillus circulans (349 aa) fasta scores: opt: 710, Z-score: 676.3, 38.873% identity (41.071% ungapped) in 355 aa overlap. Contains Pfam match to entry PF00107 adh_zinc, Zinc-binding dehydrogenases. N-terminus rich in pro/val/ser. putative oxidoreductase	Lin2969 protein	Residues 1 to 350 of 350 are 99 pct identical to residues 1 to 350 of a 350 aa protein from Escherichia coli K12 ref: NP_415829.1 putative oxidoreductase	identified by match to protein family HMM PF00107 alcohol dehydrogenase, zinc-dependent	oxidoreductase (probable Zn-dependent dehydrogenases (EC 1.1.1.-), threonine 3-dehydrogenase (EC 1.1.1.103))	Code: ER; COG: COG1063 putative oxidoreductase	oxidoreductase, zinc-binding dehydrogenase family identified by match to protein family HMM PF00107	Zinc-containing alcohol dehydrogenase superfamily	Hypothetical zinc-type alcohol dehydrogenase-like protein YcjQ	Alcohol dehydrogenase, zinc-binding protein PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like KEGG: nph:NP1340A oxidoreductase (probable Zn-dependent dehydrogenase , threonine 3-dehydrogenase)	oxidoreductase (probable Zn-dependent dehydrogenases, threonine 3-dehydrogenase)	Alcohol dehydrogenase, zinc-binding protein	Hypothetical zinc-type alcohol dehydrogenase-like protein ycjQ	Complete genome	Alcohol dehydrogenase, zinc-binding domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein KEGG: mmc:Mmcs_3903 alcohol dehydrogenase, zinc-binding protein	putative oxidoreductase Code: ER; COG: COG1063	hypothetical zinc-type alcohol dehydrogenase-like protein ycjQ	Alcohol dehydrogenase, zinc-binding domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein KEGG: mmc:Mmcs_3903 alcohol dehydrogenase, zinc-binding protein	Alcohol dehydrogenase, zinc-binding domain protein	Alcohol dehydrogenase zinc-binding domain protein	Family membership	Putative uncharacterized protein	Oxidoreductase, zinc-binding dehydrogenase family	Predicted oxidoreductase, Zn-dependent and NAD(P) -binding	Oxidoreductase, zinc-binding dehydrogenase family	
ECOLI01273	Uncharacterized protein ycjR	Hypothetical protein ycjR	glimmer prediction; global similarity to D-Tagatose 3-epimerase [Pseudomonas cichorii] (GI: 2804234); similar gene found in adjacent ORF (SMA1354) Putative epimerase	Putative transient receptor potential locus	D-Tagatose 3-epimerase	Putative uncharacterized protein	SCBAC17A6.24, conserved hypothetical protein, len: 266aa; similar to many eg. SW:P76044 (YCJR_ECOLI) hypothetical protein from Escherichia coli (265 aa) fasta scores: opt: 571, Z-score: 667.8, 36.502% identity (37.209% ungapped) in 263 aa overlap conserved hypothetical protein	Lin2968 protein	identified by similarity to SP:P76044; match to protein family HMM PF01261 YcjR protein	Code: G; COG: COG1082 putative transient receptor potential locus	putative epimerase similarity:fasta; SWALL:DT3E_PSECI (SWALL:O50580); Pseudomonas cichorii; D-tagatose 3-epimerase; length 290 aa; id=32.76; ungapped id=34.37; E()=3.9e-16; 235 aa overlap; query 8-234 aa; subject 15-246 aa similarity:fasta; SWALL:Q92YX3 (EMBL:AE007261); Rhizobium meliloti; putative epimerase; length 295 aa; id=91.86; ungapped id=91.86; E()=1.4e-110; 295 aa overlap; query 1-295 aa; subject 1-295 aa	putative epimerase protein Similar to SMa1353 [Sinorhizobium meliloti] and mlr3364 (D-Tagatose 3-epimerase) [Mesorhizobium loti] Similar to swissprot:Q92YX3 Putative location:bacterial cytoplasm Psort-Score: 0.2393; go_component: intracellular [goid 0005622]; go_component: extrachromosomal DNA [goid 0046821]; go_function: DNA binding [goid 0003677]; go_function: endonuclease activity [goid 0004519]; go_process: DNA repair [goid 0006281]	Putative uncharacterized protein	Putative transient receptor potential locus	YcjR protein	putative transient receptor potential locus	Putative uncharacterized protein	Xylose isomerase domain protein TIM barrel	Xylose isomerase domain protein TIM barrel	Putative uncharacterized protein	AP endonuclease, family 2	Predicted enzyme	AP endonuclease, family 2	Xylose isomerase domain protein TIM barrel	AP endonuclease, family 2	Putative uncharacterized protein	AP endonuclease, family 2	Putative uncharacterized protein	AP endonuclease, family 2	
ECOLI01274	Uncharacterized oxidoreductase ycjS	Lmo2834 protein	Hypothetical oxidoreductase ycjS	oxidoreductase	conserved hypothetical protein	Probable oxidoreductase	PMID: 10086842 best DB hits: BLAST: pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=3e-27 ddbj:BAB07562.1; (AP001520) oxidoreductase [Bacillus halodurans]; E=5e-26 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=3e-23 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=3e-28 PFAM: PF01408; Oxidoreductase family, NAD-bin; E=7.5e-40 PF02894; Oxidoreductase family, C-termi; E=2.8e-10 NADH-dependent dehydrogenase	Product confidence : putative Gene name confidence : hypothetical putative oxidoreductase protein	Putative dehydrogenase	BH2165 protein	Predicted dehydrogenases and related proteins	Lin2967 protein	Myo-inositol 2-dehydrogenase protein	NADH-dependent dehydrogenase	identified by match to protein family HMM PF01408; match to protein family HMM PF02894 oxidoreductase, Gfo/Idh/MocA family	Code: R; COG: COG0673 putative dehydrogenase	putative oxidoreductase	oxidoreductase	Hypothetical oxidoreductase YcjS	Hypothetical oxidoreductase YcjS	Oxidoreductase family protein cytoplasmic protein	Oxidoreductase family protein cytoplasmic protein	oxidoreductase domain protein PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain KEGG: lxx:Lxx03020 NADH-dependent dehydrogenase	Complete genome	Oxidoreductase domain protein precursor	oxidoreductase domain protein PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain KEGG: rsp:RSP_0522 putative oxidoreductase	Oxidoreductase, Gfo/Idh/MocA family protein	hypothetical oxidoreductase YcjS	Oxidoreductase family protein	
ECOLI01275	Uncharacterized glycosyl hydrolase ycjT	Glycosyl hydrolase, family 65	Lmo2833 protein	Hypothetical transport protein ycjT	Trehalose/maltose hydrolase	Putative uncharacterized protein ycjT	Kojibiose phosphorylase	Lin2966 protein	Residues 1 to 708 of 708 are 96 pct identical to residues 48 to 755 of a 755 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287872.1 orf, conserved hypothetical protein	identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636 glycosyl transferase, family 65	similar to acid trehalase precursor (SP:P78617) (Emericella nidulans); go_component: vacuole (sensu Fungi) [goid 0000324]; go_function: alpha,alpha-trehalase activity [goid 0004555]; go_process: trehalose catabolism [goid 0005993]; go_process: response to stress [goid 0006950] alpha,alpha-trehalose glucohydrolase, putative	identified by sequence similarity; putative; ORF located using Blastx; COG1554 conserved hypothetical protein	Code: G; COG: COG1554 conserved hypothetical protein	Glycoside hydrolase family 65, central catalytic	Hypothetical glycosyl hydrolase	Hypothetical transport protein YcjT	Kojibiose phosphorylase PFAM: glycoside hydrolase, family 65 domain protein; glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein KEGG: cte:CT0838 glycosyl hydrolase, family 65	Putative trehalose/maltose hydrolase	Complete genome	conserved hypothetical protein Code: G; COG: COG1554	hypothetical transport protein YcjT	Botrytis cinerea hypothetical protein	beta-phosphoglucomutase	Kojibiose phosphorylase	Kojibiose phosphorylase	Put. Trehalose/maltose hydrolase	Putative uncharacterized protein	Glycosyl hydrolase, family 65	Predicted hydrolase	
ECOLI01276	Putative beta-phosphoglucomutase	Beta-phosphoglucomutase	Alr0728 protein	Lmo2831 protein	Uncharacterized protein ML0393	Putative beta-phosphoglucomutase	HAD-superfamily hydrolase	Beta-phosphoglucomutase	Putative beta-phosphoglucomutase	BETA-PHOSPHOGLUCOMUTASE	Beta-phosphoglucomutase	Beta-phosphoglucomutase	Hydrolase	Beta-phosphoglucomutase	Predicted phosphatase/phosphohexomutase	Lin2964 protein	Residues 1 to 219 of 219 are 99 pct identical to residues 1 to 219 of a 219 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287871.1 putative beta-phosphoglucomutase	Beta-PGM	Probable beta-phosphoglucomutase	Uncharacterized protein Rv3400/MT3508	Mb3433, -, len: 262 aa. Equivalent to Rv3400, len: 262 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 262 aa overlap). Probable hydrolase (EC 3.-.-.-), strongly equivalent to Q49741|YY00_MYCLE|ML0393|B1620_F3_119 HYPOTHETICAL 28.6 KDA PROTEIN from Mycobacterium leprae (261 aa), FASTA scores: opt: 1293, E(): 2.2e-71, (74.45% identity in 262 aa overlap). Similar to several various proteins (notably hydrolases) e.g. Q9L2I7|SCF42.32 PUTATIVE HYDROLASE from Streptomyces coelicolor (246 aa), FASTA scores: opt: 888, E(): 7.7e-47, (56.35% identity in 245 aa overlap); Q9EX06|2SCG38.13 PUTATIVE HYDROLASE from Streptomyces coelicolor (238 aa), FASTA scores: opt: 195, E(): 8.1e-05, (29.5% identity in 234 aa overlap); Q9I5X4|PA0562 PROBABLE HYDROLASE from Pseudomonas aeruginosa (224 aa), FASTA scores: opt: 190, E(): 0.00015, (27.8% identity in 248 aa overlap); O06995|PGMB_BACSU|YVDM PUTATIVE BETA-PHOSPHOGLUCOMUTASE from Bacillus subtilis (226 aa), FASTA scores: opt: 190, E(): 0.00016, (33.9% identity in 245 aa overlap); etc. Also similar to Mycobacterium tuberculosis hypothetical protein Q10850|YK06_MYCTU|Rv2006|MT2062|MTCY39.11c (1327 aa), FASTA scores: opt: 413, E(): 2e-17, (34.9% identity in 238 aa overlap). Interestingly, note that Rv3400 and Rv3401 are similar to beginning and end of Q10850|YK06_MYCTU|Rv2006|MT2062|MTCY39.11c with approx.  270 aa missing from the middle. PROBABLE HYDROLASE	InterProMatches:IPR010972, IPR010976 beta-phosphoglucomutase and glucose-1-phosphate phosphodismutase	COG0637 Predicted phosphatase-phosphohexomutase beta-phosphoglucomutase	Beta-phosphoglucomutase	Beta-phosphoglucomutase	beta-phosphoglucomutase	identified by similarity to SP:P71447; match to protein family HMM PF00702; match to protein family HMM TIGR01509 beta-phosphoglucomutase	identified by similarity to SP:P71447; match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01990; match to protein family HMM TIGR02009 putative beta-phosphoglucomutase	identified by sequence similarity; putative; ORF located using Blastx; COG0637 beta-phosphoglucomutase	

ECOLI01278	Outer membrane protein G	Outer membrane protein	similar to Escherichia coli K12 outer membrane protein gi: 1787579 (302 aa). BLAST with identity of 98% in 301 aa. This CDS has been truncated. The sequence has been checked and is believed to be correct. pseudo	Outer membrane protein G	Outer membrane protein G	outer membrane protein G precursor	Outer membrane protein G precursor	Putative uncharacterized protein	Outer membrane protein G	Outer membrane porin	Outer membrane protein G	Outer membrane protein G precursor	Monomeric porin OmpG	Monomeric porin OmpG	Outer membrane protein G	Putative uncharacterized protein	Outer membrane porin	Outer membrane porin	Outer membrane porin	Outer membrane porin	Outer membrane porin OmpG	Outer membrane porin	OmpG protein	Outer membrane porin	Outer membrane porin	pseudo outer membrane porin OmpG, C-terminal part	conserved hypothetical protein KEGG: ses:SARI_03140 hypothetical protein	Outer membrane porin	Outer membrane protein G	
ECOLI01279	Uncharacterized HTH-type transcriptional regulator ycjW	Putative LACI-type transcriptional regulator	Residues 1 to 332 of 332 are 99 pct identical to residues 1 to 332 of a 332 aa protein from Escherichia coli K12 ref: NP_415836.1 putative LACI-type transcriptional regulator	Code: K; COG: COG1609 putative LACI-type transcriptional regulator	Hypothetical transcriptional regulator YcjW	Hypothetical transcriptional regulator YcjW	putative LACI-type transcriptional regulator Code: K; COG: COG1609	hypothetical transcriptional regulator YcjW	Transcriptional regulator, LacI family	Putative uncharacterized protein	Transcriptional regulator, LacI family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LacI family	Transcriptional regulator, LacI family	Transcriptional regulator, LacI family	Putative uncharacterized protein	Transcriptional regulator, LacI family	Transcriptional regulator, LacI family	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	YcjW protein	Predicted DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	predicted DNA-binding transcriptional regulator, LACI-type	
ECOLI01280	Uncharacterized protein ycjX	Uncharacterized protein HI1637	Putative uncharacterized protein	Predicted ATPase	Putative uncharacterized protein	Putative ATP-binding protein	putative ATPase	Hypothetical protein ycjX	similar to GP:14021682; identified by sequence similarity; putative conserved hypothetical protein	Putative uncharacterized protein VC1306	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Amino acid regulated cytosolic protein	Putative uncharacterized protein VP1871	Putative EC 2.1 enzymes	hypothetical protein	Putative uncharacterized protein	Putative ATP-binding protein	Residues 1 to 465 of 465 are 98 pct identical to residues 1 to 465 of a 465 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287867.1 putative EC 2.1 enzymes	Putative uncharacterized protein	Similar to unknown protein YcjX of Escherichia coli	identified by similarity to GB:CAC46385.1 conserved hypothetical protein	Putative uncharacterized protein	IPR007413: YcjX-like protein putative ATPase	similar to Salmonella typhi CT18 putative ATP-binding protein putative ATP-binding protein	similar to BR1034, conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	amino acid regulated cytosolic protein	
ECOLI01281	UPF0283 membrane protein ycjF	UPF0283 membrane protein HI0043	UPF0283 membrane protein PM0909	UPF0283 membrane protein VV2076	UPF0283 membrane protein ycjF	hypothetical membrane protein	UPF0283 membrane protein ycjF	identified by match to TIGR protein family HMM TIGR01620 conserved hypothetical protein	UPF0283 membrane protein ECA1987	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	UPF0283 membrane protein BMEI0952	UPF0283 membrane protein VP1870	UPF0283 membrane protein ycjF	hypothetical protein	UPF0283 membrane protein VV1_2269	Residues 1 to 353 of 353 are 99 pct identical to residues 1 to 353 of a 353 aa protein from Escherichia coli O157:H7 ref: NP_309928.1 orf, conserved hypothetical protein	UPF0283 membrane protein YPO2347/y1985/YP_2134	UPF0283 membrane protein plu2581	identified by similarity to GB:BAB48295.1; match to protein family HMM TIGR01620 conserved hypothetical protein TIGR01620	Conserved hypothetical membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	similar to BR1033, conserved hypothetical protein conserved hypothetical protein	UPF0283 membrane protein YPTB2265	GTP-binding protein	Similar to: HI0043, Y043_HAEIN conserved hypothetical membrane protein	Hypothetical protein	UPF0283 membrane protein ycjF	conserved hypothetical transmembrane protein	
ECOLI01282	Transcriptional regulatory protein tyrR	Transcriptional regulator TyrR	Transcriptional regulatory protein tyrR	hypothetical transcriptional regulator TyrR	Transcriptional Regulatory protein tyrR	Sigma-54 dependent transcriptional regulator	Transcriptional regulator TyrR	Transcriptional regulatory protein TyrR	Transcriptional regulator	Transcriptional regulator	Phenylalanine hydroxylase transcriptional activator PhhR	Transcriptional regulator TyrR	Transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport	AAA superfamily ATPases with N-terminal receiver domain	Transcriptional regulator TyrR	Residues 10 to 522 of 522 are 99 pct identical to residues 1 to 513 of a 513 aa protein from Escherichia coli K12 ref: NP_415839.1 transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport	Transcriptional regulatory protein	Transcriptional regulatory protein TyrR	IPR002078: Sigma-54 factor interaction domain; IPR002197: Helix-turn-helix, Fis-type transcriptional regulator of aromatic amino acid biosynthesis genes (aroF, aroG, tyrA) and aromatic amino acid transport, has intrinsic ATPase and phosphatase activity (EBP family)	similar to Salmonella typhi CT18 transcriptional regulatory protein TyrR transcriptional regulatory protein TyrR	Transcriptional regulatory protein	transcriptional regulatory protein TyrR	Sigma-54 dependent transcriptional regulator PhhR	Transcriptional regulator of aromatic amino acids metabolism	Transcriptional regulatory protein tyrR	identified by similarity to SP:P07604; match to protein family HMM PF00158; match to protein family HMM PF01842; match to protein family HMM TIGR01199 sigma-54 dependent transcriptional regulator TyrR	identified by similarity to GB:AAC44635.1; match to protein family HMM PF00158; match to protein family HMM PF01842; match to protein family HMM TIGR01199 transcriptional regulator PhhR	identified by similarity to GB:AAC44635.1; match to protein family HMM PF00158; match to protein family HMM PF01842; match to protein family HMM TIGR01199 sigma-54 dependent transcriptional regulator PhhR	Helix-turn-helix, Fis-type	
ECOLI01283	Thiol peroxidase	Probable thiol peroxidase	Putative thiol peroxidase	Probable thiol peroxidase	Probable thiol peroxidase	AhpC/TSA family protein	Probable thiol peroxidase	Probable thiol peroxidase	Probable thiol peroxidase	Probable thiol peroxidase	Probable thiol peroxidase	Thiol peroxidase	Probable thiol peroxidase	Probable thiol peroxidase	Probable thiol peroxidase	Putative thiol peroxidase	Thiol peroxidase	Thiol peroxidase	Thiol peroxidase	Thiol peroxidase	Thiol peroxidase	Probable thiol peroxidase	identified by match to protein family HMM PF00578 thiol peroxidase	Thiol peroxidase	Probable thiol peroxidase	Antioxidant, AhpC/TSA family	Thiol peroxidase	Thioredoxin peroxidase	PMID: 7499381 best DB hits: BLAST: swissprot:P80864; TPX_BACSU PROBABLE THIOL PEROXIDASE; E=2e-39 swissprot:P31307; TPX_STRPA PROBABLE THIOL PEROXIDASE -----; E=4e-33 swissprot:P42366; TPX_STRGC PROBABLE THIOL PEROXIDASE -----; E=5e-33 COG: BS_ytgI; COG2077 Thiol peroxidase; E=1e-40 APE2125; COG1225 Peroxiredoxins; E=1e-08 DR2242; COG0450 Thiol - alkyl hydroperoxide reductases; E=1e-05 PFAM: PF00578; AhpC/TSA family; E=9.5e-20 probable thiol peroxidase	
ECOLI01285	Protein mpaA	Putative carboxypeptidase	Putative uncharacterized protein	Putative uncharacterized protein VPA1740	Protein mpaA	Residues 1 to 262 of 262 are 98 pct identical to residues 1 to 262 of a 262 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287862.1 ycjI gene product	Putative uncharacterized protein	putative carboxypeptidase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative carboxypeptidase	Code: E; COG: COG2866 putative carboxypeptidase	Code: E; COG: COG2866 putative carboxypeptidase	Code: E; COG: COG2866 putative carboxypeptidase	Putative uncharacterized protein	Hypothetical protein	Putative lysine carboxypeptidase	Hypothetical protein	Hypothetical protein	putative carboxypeptidase Code: E; COG: COG2866	Hypothetical protein	putative lysine carboxypeptidase	Uncharacterized conserved protein	Peptidase M14, carboxypeptidase A	Putative carboxypeptidase	Putative uncharacterized protein	Peptidase, M14C family	Peptidase M14 carboxypeptidase A	Murein peptide amidase A	
ECOLI01284	Uncharacterized protein ycjG	O-succinylbenzoate-CoA synthase	Chloromuconate cycloisomerase	Chloromuconate cycloisomerase	Predicted enzyme related to O-succinylbenzoate synthase	Muconate cycloisomerase	O-succinylbenzoate-CoA synthase	Mandelate racemase/muconate lactonizing enzyme family protein	Mandelate racemase/muconate lactonizing enzyme family protein	Muconate cycloisomerase	Chloromuconate cycloisomerase, putative	Muconate cycloisomerase	Mandelate racemase/muconate lactonizing enzyme family protein	Putative mandelate racemase , muconate lactonizing enzyme family protein	Muconate cycloisomerase	Muconate cycloisomerase	Hypothetical muconate cycloisomerase I	Hypothetical protein ycjG	chloromuconate cycloisomerase	identified by match to TIGR protein family HMM TIGR00256 mandelate racemase/muconate lactonizing enzyme family protein	PMID: 11016950 best DB hits: BLAST: gb:AAG20045.1; (AE005084) chloromuconate cycloisomerase; YkfB1; E=8e-48 gb:AAF28135.1; AF153317_32 (AF153317) YcjG [Shigella dysenteriae]; E=6e-28 swissprot:P51981; YCJG_ECOLI HYPOTHETICAL 34.7 KD PROTEIN IN; E=1e-27 COG: VNG1837G; COG1441 O-succinylbenzoate synthase and related enzymes; E=8e-49 PFAM: PF02746; Mandelate racemase / muconate; E=1.3e-09 PF01188; Mandelate racemase / muconate; E=4.9e-21 chloromuconate cycloisomerase YkfB1	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	MUCONATE CYCLOISOMERASE I	Putative muconate cycloisomerase I	Putative muconate cycloisomerase I	CDS_ID OB2965 muconate cycloisomerase	probable muconate cycloisomerase	Putative muconate cycloisomerase	Muconate cycloisomerase	
ECOLI01286	Putative uncharacterized protein ymjC	pseudo	Putative uncharacterized protein	
ECOLI01287	Uncharacterized protein ycjY	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1677	Putative uncharacterized protein	SC5G9.15c, possible pseudogene, len: 302 aa; similar to hypothetical proteins e.g. SW:YCJY_ECOLI (EMBL:AE000230), YcjY, Escherichia coli hypothetical protein (310 aa). GC frameplot and codon usage plots indicate a coding region which lacks a start codon pseudo putative pseudogene	Residues 1 to 306 of 306 are 98 pct identical to residues 5 to 310 of a 310 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287858.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Code: R; COG: COG1073 conserved hypothetical protein	Code: R; COG: COG1073 conserved hypothetical protein	alpha/beta superfamily hydrolase	Putative uncharacterized protein	peptidase S15 PFAM: peptidase S15 KEGG: bur:Bcep18194_B2670 alpha/beta hydrolase	Putative uncharacterized protein	dienelactone hydrolase PFAM: dienelactone hydrolase KEGG: ade:Adeh_3213 hypothetical protein	conserved hypothetical protein KEGG: mes:Meso_3911 hypothetical protein	dienelactone hydrolase domain protein	conserved hypothetical protein KEGG: vpa:VP1677 hypothetical protein	putative hydrolase, alpha/beta fold family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	conserved hypothetical protein	conserved hypothetical protein Code: R; COG: COG1073	conserved hypothetical protein KEGG: ade:Adeh_3213 hypothetical protein	hypothetical protein YcjY	Putative hydrolase of the alpha/beta superfamily	hypothetical protein	Alpha/beta superfamily-like hydrolase	
ECOLI01288	Uncharacterized HTH-type transcriptional regulator ycjZ	LysR-family transcriptional regulator	Putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Transcriptional regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Hypothetical transcriptional regulator YcjZ	Hypothetical transcriptional regulator YcjZ	Putative transcriptional regulatory protein, LysR family	hypothetical transcriptional regulator YcjZ	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative transcriptional regulator	Putative transcriptional regulator	Putative HTH-type transcriptional regulator YcjZ	Putative nucleic acid-binding regulator	Putative nucleic acid-binding regulator	Transcriptional regulator, LysR family	Putative nucleic acid-binding regulator	Putative nucleic acid-binding regulator	Putative transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	
ECOLI01289	Periplasmic murein peptide-binding protein	ABC-type dipeptide/oligopeptide/nickel transport systems	Periplasmic murein peptide-binding protein	Periplasmic murein peptide-binding protein	Putative transport periplasmic protein	Residues 1 to 544 of 544 are 99 pct identical to residues 1 to 544 of a 544 aa protein from Escherichia coli K12 ref: NP_415845.1 putative transport periplasmic protein	Periplasmic murein peptide-binding protein	periplasmic murein tripeptide transport protein, also negative regulator of mulitple antibiotic resistance	similar to Salmonella typhi CT18 periplasmic murein peptide-binding protein MppA periplasmic murein peptide-binding protein MppA	Periplasmic murein tripeptide transport protein	Code: E; COG: COG4166 putative transport periplasmic protein	Code: E; COG: COG4166 putative transport periplasmic protein	Code: E; COG: COG4166 putative transport periplasmic protein	Periplasmic murein peptide-binding protein	Heme-binding protein A	putative transport periplasmic protein Code: E; COG: COG4166	periplasmic murein peptide-binding protein precursor	Extracellular solute-binding protein, family 5 precursor	Periplasmic murein tripeptide (L-Ala-gamma-D-Glut -m-DAP) permease	Periplasmic oligopeptide-binding protein	Putative uncharacterized protein	Periplasmic murein peptide-binding protein	Extracellular solute-binding protein family 5 precursor	Murein tripeptide (L-ala-gamma-D-glutamyl-meso- DAP) transporter subunit; periplasmic-binding component of ABC superfamily	Periplasmic murein peptide-binding protein	Extracellular solute-binding protein family 5 precursor	Periplasmic murein peptide-binding protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01290	MscS family inner membrane protein ynaI	Conserved protein	Putative uncharacterized protein	NEQ198	Putative uncharacterized protein	Small mechanosensitive ion channel, MscS family	Small conductance mechanosensitive channel	Putative uncharacterized protein PF0412	Mechanosensitive (MS) ion channel	Small mechanosensitive ion channel, MscS family	Putative uncharacterized protein	Mechanosensitive ion channel	Putative membrane protein	putative membrane protein	Putative uncharacterized protein	Hypothetical protein ynaI	Product confidence : hypothetical Gene name confidence : hypothetical conserved hypothetical membrane protein	hypothetical protein	Putative membrane protein	MscS family inner membrane protein ynaI	SCF43A.26c, conserved possible membrane protein, len: 333 aa; unknown function, similar to (or to part of) many hypothetical proteins of different sizes e.g.  TR:Q55987 (EMBL:D64005) Synechocystis sp. hypothetical protein (617 aa), fasta scores; opt: 581 z-score: 633.2 E(): 6.2e-28, 40.1% identity in 232 aa overlap and TR:O05781 (EMBL:Z95150) Mycobacterium tuberculosis hypothetical protein (308 aa) (34.9% identity in 301 aa overlap). Contains hydrophobic, possible membrane-spanning region. Contains Pfam match to entry PF00924 UPF0003, Uncharacterized protein family UPF0003 conserved hypothetical protein	Residues 1 to 343 of 343 are 99 pct identical to residues 1 to 343 of a 343 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287855.1 orf, conserved hypothetical protein	Transmembrane protein	Small-conductance mechanosensitive channel	Putative uncharacterized protein TTHA1715	IPR006686: Mechanosensitive (MS) ion channel subdomain putative integral membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative integral membrane protein	conserved hypothetical transmembrane protein	
ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	
ECOLI01291	Uncharacterized protein ynaJ	Hypothetical protein ynaJ	Uncharacterized protein ynaJ	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ynaJ	conserved hypothetical protein	putative inner membrane protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ynaJ	Putative membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative inner membrane protein	
ECOLI01292	Universal stress protein E	Putative uncharacterized protein	Putative uncharacterized protein	Putative stress protein	Universal stress protein E	Putative universal stress protein family	Universal stress protein E	Putative uncharacterized protein	Universal stress protein family	Putative universal stress protein	Putative stress protein	Universal stress protein E	Universal stress protein UspA	Residues 10 to 325 of 325 are 100 pct identical to residues 1 to 316 of a 316 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287853.1 orf, conserved hypothetical protein	Universal stress protein E	Universal stress protein E	putative universal stress protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative stress protein	universal stress protein family	Similar to: HI1426, USPE_HAEIN universal stress protein E	Universal stress protein UspA and related nucleotide-binding proteins UspA protein	Universal stress protein family	UspA-related nucleotide-binding protein	Universal stress protein E	identified by similarity to SP:P03807; match to protein family HMM PF00582 universal stress protein family	identified by match to protein family HMM PF00582 universal stress protein family	Code: T; COG: COG0589 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy putative universal stress protein	
ECOLI01293	Fumarate and nitrate reduction regulatory protein	Anaerobic regulatory protein	Transcriptional regulator, Crp/Fnr family	Anaerobic regulatory protein	Transcriptional activator protein anr	Fumarate and nitrate reduction regulatory protein	Fumarate and nitrate reduction regulatory protein -like protein	Transcriptional activator, Crp family	Fumarate and nitrate reduction regulatory protein	CRP family transcriptional regulator	Putative anaerobic growth regulatory protein	putative fumarate and nitrate reductionregulatory protein	Fumarate and nitrate reduction regulatory protein	Fumarate and nitrate reduction regulatory protein	Transcriptional regulatory protein btr	Transcriptional regulatory protein	Electron transport regulator A	Fumarate and nitrate reduction regulatory protein	glimmer prediction good match (e-39) to Rhizobium meliloti FixK protein FixK-like regulatory protein	Transcriptional activator Anr	Transcriptional regulatory protein	transcriptional regulator (Crp family, AMP-binding protein)	Transcriptional regulator, Crp/Fnr family	Fumarate and nitrate reduction regulatory protein	Fumarate and nitrate reduction regulatory protein	Putative uncharacterized protein	Transcriptional regulator	Residues 1 to 261 of 261 are 99 pct identical to residues 4 to 264 of a 264 aa protein from Shigella dysenteriae gb: AAF28139.1 Fnr	Fumarate and nitrate reduction regulatory protein	
ECOLI01294	Methylated-DNA--protein-cysteine methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	Putative methylated-DNA-protein-cysteine methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	O-6-alkylguanine-DNA/cysteine-protein methyltransferase	Methylated-DNA--protein-cysteine S- methyltransferase	Probable methylated-DNA-protein-cysteine methyltransferase	Methylated-DNA--[protein]-cysteine S- methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	identified by match to protein family HMM PF01035; match to protein family HMM PF02870; match to protein family HMM TIGR00589 methylated-DNA--protein-cysteine S-methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	Putative methylated-DNA:protein-cysteine methyltransferase	Putative DNA repair related protein	O-6-alkylguanine-DNA/cysteine-protein methyltransferase	Methylated-DNA-protein-cysteine S- methyltransferase	Lin0995 protein	Residues 1 to 171 of 171 are 100 pct identical to residues 1 to 171 of a 171 aa protein from Escherichia coli K12 ref: NP_415851.1 O-6-alkylguanine-DNA-cysteine-protein methyltransferase	Putative methylated-DNA--protein-cysteine methyltransferase	Methylated-DNA--protein-cysteine methyltransferase	Mb1349c, ogt, len: 165 aa. Equivalent to Rv1316c, len: 165 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 165 aa overlap). Probable ogt, methylated-dna--protein-cysteine methytransferase (EC 2.1.1.63), similar to many e.g. OGT_HAEIN|P44687 Haemophilus influenzae (190 aa), FASTA scores: opt: 405, E(): 6.5e-20, (41.9% identity in 155 aa overlap). Contains PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. PROBABLE METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE OGT (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase)	Putative methylated-DNA--protein-cysteine methyltransferase	IPR001497: Methylated-DNA-[protein]-cysteine S-methyltransferase;protein O-6-alkylguanine-DNA/cysteine-protein methyltransferase	similar to Salmonella typhi CT18 O6-methylguanine-DNA-alkyltransferase O6-methylguanine-DNA-alkyltransferase	Putative methylated-DNA--protein-cysteine methyltransferase	
ECOLI01295	Aminobenzoyl-glutamate transport protein	Putative efflux pump component protein	Putative uncharacterized protein CPE0072	Sodium:sulfate symporter transmembrane domain protein	Putative p-aminobenzoyl-glutamate transporter	Putative efflux pump component protein	Aminobenzoyl-glutamate transport protein	Putative uncharacterized protein VP0662	Putative membrane protein	similar to AE006151-7|AAK03188.1| percent identity: 35 in 519 aa conserved hypothetical protein	Aminobenzoyl-glutamate transport protein	aminobenzoyl-glutamate transporter	Similar to Bacteroides thetaiotaomicron putative efflux pump component protein BT0751 SWALL:AAO75858 (EMBL:AE016929) (478 aa) fasta scores: E(): 9.7e-149, 75.1% id in 478 aa, and to Escherichia coli aminobenzoyl-glutamate transport protein AbgT or B1336 SWALL:ABGT_ECOLI (SWALL:P46133) (510 aa) fasta scores: E(): 3.3e-52, 31.59% id in 478 aa putative transport-related membrane protein	Aminobenzoyl-glutamate transport protein.,Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl- glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype. putative aminobenzoyl-glutamate transporter	similar to gi|57285169|gb|AAW37263.1| [Staphylococcus aureus subsp. aureus COL], percent identity 71 in 512 aa, BLASTP E(): 0.0 putative p-aminobenzoyl-glutamate transporter	Code: H; COG: COG2978 putative pump protein (transport)	Hypothetical protein	Aminobenzoyl-glutamate transporter	AbgT putative transporter	KEGG: saz:Sama_3423 transporter transporter	Aminobenzoyl-glutamate transport protein	Aminobenzoyl-glutamate transport protein	AbgT putative transporter	Predicted cryptic aminobenzoyl-glutamate transporter	AbgT putative transporter	Aminobenzoyl-glutamate transport protein	AbgT transporter family	Aminobenzoyl-glutamate transport protein	Putative p-aminobenzoyl-glutamate transporter- like protein	
ECOLI01296	Aminobenzoyl-glutamate utilization protein B	Amidohydrolase	Aminobenzoyl-glutamate utilization protein B	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	CDS_ID OB3285 hypothetical protein	Aminobenzoyl-glutamate utilization protein B	Hyppurate hydrolase protein	amidohydrolase	go_function: carboxypeptidase activity [goid 0004180]; go_process: proteolysis and peptidolysis [goid 0006508] amidohydrolase, putative	Code: R; COG: COG1473 conserved hypothetical protein	Code: R; COG: COG1473 conserved hypothetical protein	Peptidase M20D, amidohydrolase	putative peptidase similarity:fasta; SWALL:ABGB_ECOLI (SWALL:P76052); Escherichia coli; aminobenzoyl-glutamate utilization protein b; abgB; length 481 aa; 473 aa overlap; query 24-492 aa; subject 8-478 aa similarity:fasta; SWALL:Q92MS5 (EMBL:AL591791); Rhizobium meliloti; hypothetical protein smc02024; length 535 aa; 485 aa overlap; query 14-497 aa; subject 48-532 aa	amidohydrolase KEGG: pol:Bpro_0044 peptidase M20D, amidohydrolase TIGRFAM: amidohydrolase PFAM: peptidase M20; peptidase dimerisation domain protein	probable hippurate hydrolase Hippurate hydrolase (EC 3.5.1.32) (Benzoylglycine amidohydrolase) (Hippuricase). TREMBL:Q7VUP2: 43% identity, 57% similarity InterPro; IPR002933; Peptidase_M20.  InterPro; IPR010168; Pept_M20D_amidh. Pfam; PF01546; Peptidase_M20; 1. TIGRFAMs; TIGR01891; amidohydrolases TIGR00003: copper-ion-binding protein No signal peptide (Signal P predicted) No transmembrane helices present High confidence in function and specificity	Amidohydrolase	Putative Peptidase M20D, amidohydrolase; putative Aminobenzoyl-glutamate utilization protein	metal-dependent exopeptidase	Putative Peptidase M20D, amidohydrolase	Aminobenzoyl-glutamate utilization protein B	Probable amidohydrolase	Peptidase M20D, amidohydrolase	Amidohydrolase	Aminobenzoyl-glutamate utilization protein	Aminobenzoyl-glutamate utilization protein B	Amidohydrolase	Aminobenzoyl-glutamate utilization protein	Predicted peptidase, aminobenzoyl-glutamate utilization protein	
ECOLI01297	Aminobenzoyl-glutamate utilization protein A	Related to metal-dependent aminohydrolases	hypothetical hydrolase	Putative amino acid amidohydrolase	Putative aminohydrolase	CDS_ID OB3283 indole-3-acetyl-L-aspartic acid hydrolase	Aminobenzoyl-glutamate utilization protein A	indole-3-acetyl-L-aspartic acid hydrolase	Code: R; COG: COG1473 putative aminohydrolase	Metal-dependent amidase/aminoacylase/carboxypeptidase COG1473	amidohydrolase family protein identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891	Indole-3-acetyl-L-aspartic acid hydrolase	Aminobenzoyl-glutamate utilization protein	Aminobenzoyl-glutamate utilization protein A	Amidohydrolase	Predicted peptidase, aminobenzoyl-glutamate utilization protein	Aminobenzoyl-glutamate utilization protein A	Amidohydrolase	Aminobenzoyl-glutamate utilization protein A	Probable aminohydrolase	Aminobenzoyl-glutamate utilization protein A	Aminobenzoyl-glutamate utilization protein A	Putative aminohydrolase	Putative peptidase, para-aminobenzoyl-glutamate utilization protein	Putative peptidase, para-aminobenzoyl-glutamate utilization protein	Putative peptidase, para-aminobenzoyl-glutamate utilization protein	Putative amidohydrolase	Probable aminobenzoyl-glutamate utilization protein A	Putative peptidase, para-aminobenzoyl-glutamate utilization protein	
ECOLI01298	HTH-type transcriptional regulator abgR	LysR-family transcriptional regulator	similar to GB:U09414, SP:P52743, and PID:488557; identified by sequence similarity; putative transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative transcriptional regulator LYSR-type	Putative transcriptional regulator	Putative transcriptional regulator AbgR	transcriptional regulator	transcriptional regulators, LysR family	Transcriptional regulator LysR protein	regulatory protein, LysR:LysR, substrate-binding	transcriptional regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	putative LysR family transcriptional regulator similarity:fasta; SWALL:Q8ZPB0 (EMBL:AE008771); Salmonella typhimurium; putative lysr family transcriptional regulators; ydcI; length 307 aa; 289 aa overlap; query 8-294 aa; subject 14-301 aa	LysR-family transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466	hypothetical protein similarity to COG0583 Transcriptional regulator	transcriptional regulator, LysR family	regulatory protein, LysR:LysR, substrate-binding COG0583 Transcriptional regulator	transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: tsaR; LysR-family transcriptional regulator	Transcriptional regulator, LysR family	transcriptional regulator, LysR family identified by match to protein family HMM PF00126; match to protein family HMM PF03466	transcriptional regulator, LysR-family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	

ECOLI01299	Uncharacterized protein ydaL	Putative uncharacterized protein VV0939	Putative uncharacterized protein STY1406	conserved hypothetical protein	Hypothetical protein ydaL	Putative uncharacterized protein	Smr domain protein	Smr domain protein	SMR/MUTS FAMILY PROTEIN	Putative uncharacterized protein VP0751	Putative uncharacterized protein ydaL	Putative uncharacterized protein	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1787602 (188 aa). BLAST with identity of 98% in 187 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	Smr domain	Putative uncharacterized protein	similar to conserved hypothetical protein hypothetical protein	conserved gene Smr domain protein, DNA mismatch repair protein-like	similar to conserved hypothetical protein hypothetical protein	Putative uncharacterized protein	IPR002625: Smr protein/MutS2 C-terminal putative Smr domain	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	Smr domain protein	SMR/MUTS family protein	Smr domain protein	Smr domain (Small MutS Related) containing protein	Putative Smr domain protein	identified by match to protein family HMM PF01713 Smr domain protein	identified by match to protein family HMM PF01713 Smr domain protein	
ECOLI01300	Uncharacterized protein ydaM	Hypothetical protein ydaM	Uncharacterized protein ydaM	GGDEF family protein	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1787603 (431 aa). BLAST with identity of 98% in 431 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	Signaling protein with a PAS and GGDEF domains	identified by similarity to OMNI:NTL01SS00280; match to protein family HMM PF00785; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 sensory box/GGDEF domain protein	Code: T; COG: COG2199 conserved hypothetical protein	Code: T; COG: COG2199 conserved hypothetical protein	response regulator receiver (CheY-like) modulated diguanylate cyclase (GGDEF domain) with PAS/PAC sensor	Code: T; COG: COG2202; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydaM	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative diguanylate cyclase	Diguanylate cyclase with PAS/PAC sensor	Diguanylate cyclase with PAS/PAC sensor	Putative signaling protein	Putative uncharacterized protein	Sensory box-containing diguanylate cyclase	Putative sensory box-containing diguanylate cyclase	Predicted diguanylate cyclase, GGDEF domain signalling protein	Putative sensory box-containing diguanylate cyclase	Sensory box-containing diguanylate cyclase	Diguanylate cyclase with PAS/PAC sensor	Sensory box-containing diguanylate cyclase	Putative uncharacterized protein	
ECOLI01301	Zinc transport protein zntB	Mg2+ and Co2+ transporter	Zinc transport protein zntB	Zinc transport protein zntB	Putative uncharacterized protein VC2334	Magnesium transporter, putative	Zinc transport protein zntB	CmaX protein	Putative membrane transport protein	Zinc transport protein zntB	Mg2+ and Co2+ transporter	Residues 1 to 327 of 327 are 99 pct identical to residues 1 to 327 of a 327 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287841.1 orf, conserved hypothetical protein	Zinc transport protein zntB	Zinc transport protein zntB	identified by match to protein family HMM PF01544 magnesium transporter, CorA family	Magnesium and cobalt transporter protein	putative Zn transport protein	similar to Salmonella typhi CT18 putative membrane transport protein putative membrane transport protein	Zinc transport protein zntB	CmaX protein	Mg/Co transporter	Zinc transport protein zntB	identified by match to protein family HMM PF01544 cmaX protein	identified by match to protein family HMM PF01544 cmaX protein	Mg2+ transporter protein, CorA-like	Similar to Bacillus subtilis hypothetical protein YfjQ TR:O31543 (EMBL:Z99108) (319 aa) fasta scores: E(): 1.1e-29, 33.1% id in 296 aa, and to Rhizobium loti divalent cation transport-related protein MLR5559 TR:BAB51987 (EMBL:AP003006) (364 aa) fasta scores: E(): 1e-18, 28.88% id in 322 aa CorA-like Mg2+ transporter protein	Code: P; COG: COG0598 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative transporter protein	Code: P; COG: COG0598 conserved hypothetical protein	

ECOLI01302	ATP-independent RNA helicase dbpA	Probable ATP-dependent RNA helicase MG425	Probable ATP-dependent RNA helicase MG425 homolog	ATP-independent RNA helicase	RNA helicase DbpA	DNA and RNA helicase	Probable ATP-independent RNA helicase	ATP-independent RNA helicase	putative ATP-dependent RNA helicase DbpA	ATP-dependent RNA helicase	ATP-independent RNA helicase dbpA	ATP-dependent RNA helicase DbpA	Probable ATP-dependent RNA helicase	Probable ATP-dependent RNA helicase	ATP-dependent RNA helicase DbpA	ATP-independent RNA helicase	ATP-independent RNA helicase DbpA	Probable ATP-dependent RNA helicase	ATP-dependent RNA helicase DbpA	ATP-dependent RNA helicase DbpA	ATP-dependent RNA helicase	Superfamily II DNA and RNA helicase	Residues 1 to 411 of 411 are 99 pct identical to residues 45 to 457 of a 457 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287840.1 ATP-dependent RNA helicase	ATP-dependent RNA helicase	Probable DEAD-box ATP-dependent RNA helicase SAV2081	Probable atp-dependent rna helicase protein	Similar to ATP-dependent RNA helicase hypothetical protein	conserved gene ATP dependent RNA helicase DbpA	Similar to ATP-dependent RNA helicase hypothetical protein	
ECOLI01303	tRNA 2-thiocytidine biosynthesis protein ttcA	ATPases of the PP superfamily	Conserved protein	tRNA 2-thiocytidine biosynthesis protein ttcA	Putative uncharacterized protein	tRNA 2-thiocytidine biosynthesis protein ttcA	Putative uncharacterized protein	tRNA 2-thiocytidine biosynthesis protein ttcA	tRNA 2-thiocytidine biosynthesis protein ttcA	Conserved protein	Putative uncharacterized protein PH1680	Putative uncharacterized protein	Putative uncharacterized protein CPE1494	tRNA 2-thiocytidine biosynthesis protein ttcA	tRNA 2-thiocytidine biosynthesis protein ttcA	tRNA 2-thiocytidine biosynthesis protein ttcA	Putative uncharacterized protein	Predicted ATPase	tRNA 2-thiocytidine biosynthesis protein ttcA	tRNA 2-thiocytidine biosynthesis protein ttcA	tRNA 2-thiocytidine biosynthesis protein ttcA	Putative uncharacterized protein	Putative uncharacterized protein	tRNA 2-thiocytidine biosynthesis protein ttcA	Putative ATPase	tRNA 2-thiocytidine biosynthesis protein ttcA	Hypothetical protein ydaO	identified by match to PFAM protein family HMM PF01171 conserved hypothetical protein	Putative uncharacterized protein	
ECOLI01304	Putative lambdoid prophage Rac integrase	Related to pore-forming cytotoxin integrase	DNA integration/recombination/invertion protein	Putative phage integrase	Putative integrase for prophage CP-933R	DNA integration/recombination/invertion protein	integrase/recombinase, phage associated	Putative integrase-phage associated	DNA integration/recombination/invertion protein	Code: L; COG: COG0582 putative transposase	DNA integration/recombination/inversion protein	Phage integrase	DNA integration/recombination/inversion protein	Phage integrase COG0582 [L] Integrase	phage integrase	Phage integrase	Integrase	Phage integrase	Rac prophage; integrase	Putative transposase/integrase	Integrase family protein	Integrase family protein	Integrase family protein	Integrase-related protein	Rac prophage integrase	Phage integrase family protein	Phage integrase family protein	Putative uncharacterized protein	Phage integrase family protein	
ECOLI01305	Uncharacterized protein ydaQ	Residues 1 to 55 of 55 are 100 pct identical to residues 17 to 71 of a 71 aa protein YDAQ_ECOLI sp: P76057 orf, conserved hypothetical protein	Putative excisionase	Rac prophage; conserved protein	Putative uncharacterized protein	Hypothetical phage protein	YdaQ protein	Rac prophage; conserved protein	Putative uncharacterized protein	
ECOLI01306	Uncharacterized protein ydaC	Putative uncharacterized protein ydaC	conserved hypothetical protein	unknown protein encoded within prophage CP-933R	Rac prophage; predicted protein	Putative uncharacterized protein	Hypothetical phage protein	YheB protein	YdaC protein	Rac prophage; predicted protein	Predicted protein	
ECOLI01308	Protein recT	Putative phage recombinase	Recombinase, DNA renaturation protein encoded by prophage CP-933R	Phage recombination protein	Phage-related protein	Molecular Function: DNA binding (GO:0003677), Biological Process: DNA metabolism (GO:0006259) DNA binding, phage related protein	Prophage pi1 protein 11, recombinase	Putative recombinase-phage associated	Similar to: YQAK_BACSU predicted recombinational DNA repair protein, RecE pathway	Rect protein	RecT family protein identified by match to protein family HMM PF03837; match to protein family HMM TIGR00616	Recombinational DNA repair protein (RecE pathway)	Putative phage RecT family protein	recombinational DNA repair protein	Putative uncharacterized protein	RecT protein	RecT protein	RecT protein	Phage-related protein	Rac prophage; recombination and repair protein	RecT protein	Recombinase, phage RecT family	RecT protein	Putative uncharacterized protein	RecT protein	RecT protein	Phage DNA recombinase	Protein RecT	Phage recombination protein	
ECOLI01309	Exodeoxyribonuclease 8	Putative exodeoxyribonuclease VIII of prophage CP -933R	similar to exodeoxyribonuclease VIII Gifsy-1 prophage RecE	Gifsy-1 prophage protein	Rac prophage; exonuclease VIII, 5'-> 3' specific dsDNA exonuclease	Putative enterobacterial exodeoxyribonuclease VIII	Rac prophage; exonuclease VIII, 5'-] 3' specific dsDNA exonuclease	Exonuclease family protein	Putative uncharacterized protein	Putative uncharacterized protein	Gifsy-1 prophage RecE	Gifsy-1 prophage RecE	Phage exonuclease VIII	Exodeoxyribonuclease	Rac prophage; exonuclease VIII, 5'-] 3' specific dsDNA exonuclease	probable exonuclease Prophage ECO103_P06	
ECOLI01310	Protein racC	Putative membrane protein encoded within prophage CP-933R	Residues 17 to 107 of 107 are 98 pct identical to residues 1 to 91 of a 91 aa protein from Salmonella enterica subsp. enterica serovar Typhi ref: NP_456433.1 putative bacteriophage protein	Rac prophage; predicted protein	Rac prophage; predicted protein	Hypothetical phage protein	RacC protein	Rac prophage; predicted protein	Predicted protein	
ECOLI01311	Uncharacterized protein ydaE	Rac prophage; conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	YdaE protein	Rac prophage; conserved protein	Putative bacteriophage protein	
ECOLI01312	Protein kil	Putative uncharacterized protein ydaD	Residues 1 to 73 of 73 are 100 pct identical to residues 1 to 73 of a 73 aa protein from Salmonella enterica subsp. enterica serovar Typhi ref: NP_456431.1 putative cell division inhibitor protein	Rac prophage; inhibitor of ftsZ, killing protein	Putative phage encoded cell division inhibitor protein	Hypothetical phage protein	Inhibitor of ftsZ, killing protein; Rac prophage	Kil protein	Rac prophage; inhibitor of ftsZ, killing protein	FtsZ inhibitor protein	

ECOLI01313	Superinfection exclusion protein B	prophage CP-933R superinfection exclusion protein	Rac prophage; phage superinfection exclusion protein	Hypothetical phage protein	SieB protein	Rac prophage; phage superinfection exclusion protein	Phage superinfection exclusion protein	
ECOLI01316	Rac prophage repressor	Phage-related repressor protein	Rac prophage; predicted DNA-binding transcriptional regulator	Prophage repressor	Rac prophage repressor	Putative uncharacterized protein	Rac prophage; predicted DNA-binding transcriptional regulator	putative phage repressor protein Prophage ECO103_P03	
ECOLI01317	Uncharacterized protein ydaS	conserved hypothetical protein KEGG: eba:ebB253 hypothetical protein	Putative Cro protein	Putative uncharacterized protein	Putative uncharacterized protein	Rac prophage; predicted DNA-binding transcriptional regulator	Uncharacterized prophage-related protein	Phage protein	Putative uncharacterized protein	Rac prophage; predicted DNA-binding transcriptional regulator	putative antirepressor Prophage ECO103_P03	
ECOLI01318	Uncharacterized protein ydaT	Putative uncharacterized protein	Residues 1 to 140 of 140 are 99 pct identical to residues 1 to 140 of a 140 aa protein from Salmonella enterica subsp. enterica serovar Typhi ref: NP_456425.1 orf, conserved hypothetical protein	putative bacteriophage protein	conserved hypothetical protein	Rac prophage conserved hypothetical protein	Rac prophage; predicted protein	Putative uncharacterized protein	Hypothetical phage protein	Rac prophage; predicted protein	probable phage regulatory protein CII Prophage ECO103_P10	
ECOLI01319	Uncharacterized protein ydaU	Rac prophage; conserved protein	Putative uncharacterized protein	Hypothetical phage protein	Rac prophage; conserved protein	
ECOLI01320	Uncharacterized protein ydaV	Putative DNA replication factor encoded by prophage CP-933R	DNA replication protein DnaC	similar to Escherichia coli K12 putative DNA replication factor  ref: NP_415878.1 (248 aa). BLAST with identity of 92% in 248 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	similar to dnaC Homolog in S. typhimurium IPR002198: Short-chain dehydrogenase/reductase SDR Gifsy-1 prophage DnaC	Code: L; COG: COG1484 putative DNA replication factor	Replicative DNA helicase	phage DnaC-like protein	Hypothetical protein	DNA replication protein, putative	Hypothetical protein	putative DNA replication protein Code: L; COG: COG1484	Rac prophage; predicted DNA replication protein	DNA replication protein dnaC homolog	phage DnaC-like protein KEGG: sao:SAOUHSC_02216 phage DnaC-like protein	DNA replication protein-like protein	Putative uncharacterized protein	Putative ATPase, AAA-superfamily	Rac prophage; predicted DNA replication protein	IstB domain protein ATP-binding protein	DNA replication protein	Putative uncharacterized protein	IstB-like ATP binding protein	Putative phage DNA replication protein	Putative DNA replication protein; Rac prophage	DNA replication protein DnaC	Rac prophage; predicted DNA replication protein	Putative uncharacterized protein	
ECOLI01321	Putative uncharacterized protein ydaW	putative transcription regulatory protein	Rac prophage; predicted DNA-binding protein	Hypothetical phage protein	
ECOLI01322	Putative Rz endopeptidase from lambdoid prophage Rac	identified by match to protein family HMM PF03245 prophage PSPPH06, lysis protein	Prophage endopeptidase precursor	Prophage endopeptidase precursor	conserved hypothetical protein	Rac prophage; predicted defective peptidase	Putative uncharacterized protein	Bacteriophage lysis protein	Putative phage endopeptidase	Endopeptidase (Lysis protein) from bacteriophage origin	RzpR protein	putative prophage endopeptidase	Putative prophage endopeptidase	
ECOLI01324	Trk system potassium uptake protein trkG	Trk system K+ uptake protein trkH	Trk system potassium uptake protein	Potassium uptake protein TrkH	TRK system potassium uptake protein TrkH	Potassium uptake protein	Potassium uptake protein TrkH	Potassium uptake protein TrkH	TRK SYSTEM POTASSIUM UPTAKE PROTEIN TRKH	similar to BR1500, cation transport protein cation transport protein	Similar to sp|Q9L6L2|TRKH_SALTY sp|P21166|TRKH_ECOLI sp|P23849|TRKG_ECOLI sp|P44843|TRKH_HAEIN; Ortholog to ERGA_CDS_08830 Trk system potassium uptake protein trkH	TrkH potassium uptake protein	Similar to sp|Q9L6L2|TRKH_SALTY sp|P21166|TRKH_ECOLI sp|P23849|TRKG_ECOLI sp|P44843|TRKH_HAEIN; Ortholog to ERWE_CDS_08920 Trk system potassium uptake protein trkH	identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933 potassium uptake protein TrkH	identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933 potassium uptake protein, TrkH family	K+ transporter Trk	Cation transporter	Pyrokinin:Potassium channel TASK:Cation transporter	cation transporter	K+ transporter Trk	Trk-type potassium transport system, permease protein TrkH	Cation transporter precursor	putative potassium uptake protein TrkH identified by similarity to GB:BAA31229.1; match to protein family HMM PF02386	Putative potassium uptake protein TrkH	Trk-type K+ transport systems, membrane components	cation transporter PFAM: cation transporter KEGG: rsp:RSP_1854 potassium uptake transporter, transmembrane component, TrkH	Trk system potassium uptake protein	Putative potassium uptake protein	Potassium uptake protein TrkH	
ECOLI01325	Uncharacterized protein ynaK	Rac prophage; conserved protein	YnaK protein	Rac prophage; conserved protein	
ECOLI01326	Putative uncharacterized protein ydaY	Putative uncharacterized protein	Putative uncharacterized protein	Rac prophage; predicted protein	Putative uncharacterized protein	Hypothetical phage protein	
ECOLI01327	Putative uncharacterized protein ynaA	
ECOLI01328	Transposase insH for insertion sequence element IS5Y	Putative IS5 transposase	transposase, IS4	transposase, IS4 family protein PFAM: transposase, IS4 family protein KEGG: vch:VCA0472 IS5 transposase	putative transposase	IS5 transposase and trans-activator	Transposase IS4 family protein	IS5 transposase	Transposase IS4 family protein	IS5 transposase	Transposase	Transposase IS4 family protein	IS5 transposase and trans-activator	Transposase, IS4 family protein	

ECOLI01329	Side tail fiber protein homolog from lambdoid prophage Rac	Putative phage tail protein	Probable hemolysin	IPR000104: Antifreeze protein, type I Gifsy-2 prophage probable tail fiber protein	Gifsy-2 prophage probable tail fiber protein	phage tail protein	Putative tail fiber protein	phage tail protein	Phage tail protein	putative tail fiber protein	Putative phage tail domain protein	Rac prophage; predicted tail fiber protein	Putative phage tail protein	Side tail fiber protein	Side tail fiber protein	Side tail fiber protein	Putative phage tail fiber protein	Putative tail fiber protein	Putative tail fiber protein	Putative tail fiber protein	Gifsy-2 prophage probable tail fiber protein	Putative membrane protein of prophage CP-933X	Rac prophage; predicted tail fiber protein	putative side tail fiber protein Prophage ECO103_P01	
ECOLI01329	Side tail fiber protein homolog from lambdoid prophage Rac	Putative phage tail protein	Probable hemolysin	IPR000104: Antifreeze protein, type I Gifsy-2 prophage probable tail fiber protein	Gifsy-2 prophage probable tail fiber protein	phage tail protein	Putative tail fiber protein	phage tail protein	Phage tail protein	putative tail fiber protein	Putative phage tail domain protein	Rac prophage; predicted tail fiber protein	Putative phage tail protein	Side tail fiber protein	Side tail fiber protein	Side tail fiber protein	Putative phage tail fiber protein	Putative tail fiber protein	Putative tail fiber protein	Putative tail fiber protein	Gifsy-2 prophage probable tail fiber protein	Putative membrane protein of prophage CP-933X	Rac prophage; predicted tail fiber protein	putative side tail fiber protein Prophage ECO103_P01	
ECOLI01329	Side tail fiber protein homolog from lambdoid prophage Rac	Putative phage tail protein	Probable hemolysin	IPR000104: Antifreeze protein, type I Gifsy-2 prophage probable tail fiber protein	Gifsy-2 prophage probable tail fiber protein	phage tail protein	Putative tail fiber protein	phage tail protein	Phage tail protein	putative tail fiber protein	Putative phage tail domain protein	Rac prophage; predicted tail fiber protein	Putative phage tail protein	Side tail fiber protein	Side tail fiber protein	Side tail fiber protein	Putative phage tail fiber protein	Putative tail fiber protein	Putative tail fiber protein	Putative tail fiber protein	Gifsy-2 prophage probable tail fiber protein	Putative membrane protein of prophage CP-933X	Rac prophage; predicted tail fiber protein	putative side tail fiber protein Prophage ECO103_P01	
ECOLI01329	Side tail fiber protein homolog from lambdoid prophage Rac	Putative phage tail protein	Probable hemolysin	IPR000104: Antifreeze protein, type I Gifsy-2 prophage probable tail fiber protein	Gifsy-2 prophage probable tail fiber protein	phage tail protein	Putative tail fiber protein	phage tail protein	Phage tail protein	putative tail fiber protein	Putative phage tail domain protein	Rac prophage; predicted tail fiber protein	Putative phage tail protein	Side tail fiber protein	Side tail fiber protein	Side tail fiber protein	Putative phage tail fiber protein	Putative tail fiber protein	Putative tail fiber protein	Putative tail fiber protein	Gifsy-2 prophage probable tail fiber protein	Putative membrane protein of prophage CP-933X	Rac prophage; predicted tail fiber protein	putative side tail fiber protein Prophage ECO103_P01	

ECOLI01331	Putative DNA-invertase from lambdoid prophage Rac	Resolvase	Resolvase, N-terminal domain	Resolvase, N-terminal domain	Putative resolvase	Putative site-specific recombinase, resolvase	


ECOLI01334	Universal stress protein F	Universal stress protein family	Universal stress protein F	Universal stress protein F	Universal stress protein F	Universal stress protein A homolog 2	Residues 1 to 144 of 144 are 100 pct identical to residues 25 to 168 of a 168 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287771.1 ynaF gene product	Similar to universal stress protein A hypothetical protein	conserved gene universal stress protein A (UspA)	Similar to universal stress protein A hypothetical protein	identified by match to protein family HMM PF00582 universal stress protein family protein	IPR006015: Universal stress protein (Usp) putative universal stress protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Universal stress protein F	Code: T; COG: COG0589 putative filament protein	Code: T; COG: COG0589 putative filament protein	universal stress protein family	Universal stress protein UspA and related nucleotide-binding protein COG0589	Code: T; COG: COG0589 putative filament protein	UspA PFAM: UspA: (8.4e-26) KEGG: dra:DR2132 hypothetical protein, ev=1e-31, 52% identity	universal stress protein family	UspA PFAM: UspA: (5.5e-19) KEGG: sil:SPO2185 universal stress protein family protein, ev=1e-26, 45% identity	probable universal stress protein similar to AGR_C_1650p [Agrobacterium tumefaciens], MM1454 [Methanosarcina mazei Goe1] and SMc00048[Sinorhizobium meliloti] Similar to swissprot:Q8UGY1 Putative location:bacterial inner membrane Psort-Score: 0.0939; go_function: DNA binding [goid 0003677]; go_process: response to stress [goid 0006950]	Universal stress protein F	Universal stress protein family	UspA	UspA	UspA	Putative uncharacterized protein ynaF	
ECOLI01335	Outer membrane protein N	Outer membrane protein S2	Outer membrane protein N	Partial putative outer membrane protein	Residues 1 to 285 of 298 are 98 pct identical to residues 1 to 285 of a 377 aa protein from Escherichia coli gb: AAC38644.1 porin OmpN	IPR000408: Regulator of chromosome condensation, RCC1; IPR001702: Porin, Gram-negative type; IPR001897: Porin, bacterial type outer membrane protein N, non-specific porin	similar to Salmonella typhi CT18 outer membrane protein outer membrane protein	General Bacterial Porin (GBP) family protein	Outer membrane protein N	Code: M; COG: COG3203 putative outer membrane protein	Code: M; COG: COG3203 putative outer membrane protein	Outer membrane protein N	Outer membrane protein N	outer membrane pore protein N, non-specific	Outer membrane pore protein N, non-specific	Putative uncharacterized protein	Outer membrane protein N	Porin Gram-negative type precursor	Outer membrane pore protein N, non-specific	Outer membrane protein F	Outer membrane protein N	Porin Gram-negative type precursor	Outer membrane protein N	Putative uncharacterized protein	Possible porin, gram-negative type	Putative uncharacterized protein	Porin Gram-negative type precursor	Outer membrane protein N	Outer membrane protein	
ECOLI01336	Probable pyruvate-flavodoxin oxidoreductase	Probable pyruvate-flavodoxin oxidoreductase	Pyruvate-flavoredoxin oxidoreductase	Pyruvate-flavodoxin oxidoreductase	Pyruvate flavodoxin dehydrogenase	Putative oxidoreductase, Fe-S subunit	Possible+E2677 pyruvate-flavodoxin oxidoreductase	Residues 1 to 1174 of 1174 are 99 pct identical to residues 1 to 1174 of a 1174 aa protein from Escherichia coli O157:H7 ref: NP_310027.1 putative oxidoreductase	Putative pyruvate-flavodoxin oxidoreductase	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain putative pyruvate-flavodoxin oxidoreductase	similar to Salmonella typhi CT18 probable pyruvate-flavodoxin oxidoreductase probable pyruvate-flavodoxin oxidoreductase	Putative pyruvate-flavodoxin oxidoreductase	Putative oxidoreductase, Fe-S subunit	Putative pyruvate-flavodoxin oxidoreductase	Pyruvate:ferredoxin oxidoreductase or related 2- oxoacid:ferredoxin oxidoreductase, beta subunit	Pyruvate:ferredoxin (flavodoxin) oxidoreductase	Code: C; COG: COG0674 putative oxidoreductase, Fe-S subunit	Code: C; COG: COG0674 putative oxidoreductase, Fe-S subunit	pyruvate flavodoxin/ferredoxin oxidoreductase-like	Pyruvate:ferredoxin (flavodoxin) oxidoreductase	Code: C; COG: COG0674 putative oxidoreductase, Fe-S subunit	Probable pyruvate-flavodoxin oxidoreductase	pyruvate flavodoxin/ferredoxin oxidoreductase	Putative pyruvate-flavodoxin oxidoreductase	pyruvate flavodoxin/ferredoxin oxidoreductase-like	Probable pyruvate-flavodoxin oxidoreductase	pyruvate flavodoxin/ferredoxin oxidoreductase domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein KEGG: cch:Cag_1730 pyruvate:ferredoxin (flavodoxin) oxidoreductase	pyruvate flavodoxin/ferredoxin oxidoreductase-like	Pyruvate-flavodoxin oxidoreductase identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176	
ECOLI01338	Heat shock protein hslJ	Heat shock protein	Heat shock protein hslJ	Heat shock protein HslJ	Heat shock protein HslJ	Heat shock protein hslJ	Heat shock protein	similar to Escherichia coli K12 heat shock protein hslJ  ref: NP_415897.1 (140 aa). BLAST with identity of 99% in 114 aa. This CDS has been truncated. The sequence has been checked and is believed to be correct. pseudo	Putative heat shock protein	Heat shock protein HslJ	IPR005184: Protein of unknown function DUF306 heat shock protein hslJ	similar to Salmonella typhi CT18 heat shock protein heat shock protein	Putative heat shock protein	heat shock protein HslJ	Heat shock protein hslJ	Code: O; COG: COG3187 heat shock protein hslJ	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 8349564; Product type f : factor putative heat shock protein	Code: O; COG: COG3187 heat shock protein hslJ	Putative uncharacterized protein	Putative heat shock protein precursor	Heat shock protein HslJ	Heat shock protein precursor	heat shock protein HslJ identified by match to protein family HMM PF03724	Heat shock protein HslJ	heat shock protein hslJ Code: O; COG: COG3187	Heat shock protein precursor	heat shock protein HslJ PFAM: protein of unknown function DUF306, Meta and HslJ KEGG: vch:VC1663 heat shock protein HslJ	heat shock protein HslJ	Putative uncharacterized protein precursor	
ECOLI01337	Uncharacterized protein ydbJ	Putative lipoprotein	Residues 41 to 120 of 120 are 98 pct identical to residues 9 to 88 of a 88 aa protein YDBJ_ECOLI sp: P52646 orf, conserved hypothetical protein	Putative lipoprotein	putative cytoplasmic protein	Code: R; COG: COG3042 putative cytoplasmic protein	Code: R; COG: COG3042; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein	Putative lipoprotein	Putative cytoplasmic protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	Predicted protein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein precursor	Putative lipoprotein precursor	Putative lipoprotein	Putative uncharacterized protein ydbJ	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative cytoplasmic protein	
ECOLI01339	D-lactate dehydrogenase	D-lactate dehydrogenase	2-hydroxyaciddehydrogenase	2-hydroxyacid dehydrogenase homolog	Putative dehydrogenase	Phosphoglycerate dehydrogenase	D-isomer specific 2-hydroxyacid dehydrogenase family protein	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	Uncharacterized protein Cgl2355/cg2587	Putative dehydrogenase	Probable D-lactate dehydrogenase	Putative D-Lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [goid 0016616]; go_process: metabolism [goid 0008152] D-hydroxyacid dehydrogenase, putative	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	PMID: 9025293 best DB hits: BLAST: pir:D83529; D-lactate dehydrogenase (fermentative) PA0927 [imported]; E=3e-95 pir:S76782; D-2-hydroxy-acid dehydrogenase (EC 1.1.99.6) -; E=1e-91 swissprot:P52643; LDHD_ECOLI D-LACTATE DEHYDROGENASE (D-LDH); E=1e-86 COG: PA0927; COG1052 Lactate dehydrogenase and related dehydrogenases; E=3e-96 PAB0514; COG0111 Phosphoglycerate dehydrogenase and related; E=3e-37 TP0037; COG1052 Lactate dehydrogenase and related dehydrogenases; E=5e-37 PFAM: PF00389; D-isomer specific 2-hydroxyacid; E=1.4e-24 PF02891; MIZ zinc finger; E=0.34 PF02826; D-isomer specific 2-hydroxyacid; E=2.8e-126 D-lactate dehydrogenase (fermentative)	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	Fermentative D-lactate dehydrogenase, NAD- dependent	D-lactate dehydrogenase	
ECOLI01340	Uncharacterized protein ydbH	Hypothetical protein ydbH	Putative exported protein	Putative uncharacterized protein ydbH	Residues 1 to 879 of 879 are 99 pct identical to residues 1 to 879 of a 879 aa protein from Escherichia coli K12 ref: NP_415899.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to membrane protein YdbH of Escherichia coli	putative periplasmic protein	similar to Salmonella typhimurium putative periplasmic protein putative periplasmic protein	Putative membrane protein	Uncharacterized conserved secreted protein with internal repeats	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein precursor	Putative uncharacterized protein ydbH	Membrane protein precursor	Hypothetical protein	conserved hypothetical protein	Membrane protein precursor	conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ydbH	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01341	Uncharacterized protein ynbE	Putative lipoprotein	Hypothetical protein ynbE	Putative uncharacterized protein	Putative uncharacterized protein ynbE	Residues 1 to 62 of 62 are 100 pct identical to residues 1 to 62 of a 62 aa protein from Escherichia coli K12 gi: 1787647 orf, conserved hypothetical protein	Putative lipoprotein	Similar to unknown protein YnbE of Escherichia coli	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	Possible outer membrane lipoprotein	Putative outer membrane lipoprotein	putative lipoprotein	conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Hypothetical protein precursor	Hypothetical protein	Putative lipoprotein precursor	Hypothetical protein precursor	Hypothetical protein precursor	Putative uncharacterized protein ynbE	hypothetical protein KEGG: plt:Plut_1118 hypothetical protein	
ECOLI01342	Uncharacterized protein ydbL	Putative uncharacterized protein	Putative secreted protein	conserved hypothetical protein	Hypothetical protein ydbL	Putative uncharacterized protein	Putative uncharacterized protein ydbL	Residues 11 to 119 of 119 are 97 pct identical to residues 2 to 110 of a 110 aa protein from Escherichia coli K12 ref: NP_415901.1 orf, conserved hypothetical protein	Putative exported protein	Similar to unknown protein YdbL of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative exported protein	Uncharacterized conserved secreted protein	Putative periplasmic protein	identified by similarity to OMNI:SO2062 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3784 conserved hypothetical protein	Putative uncharacterized protein	uncharacterized protein conserved in bacteria COG3784	Code: S; COG: COG3784 YdbL	conserved hypothetical protein	Putative uncharacterized protein	Uncharacterised conserved protein UCP025560 precursor	Uncharacterized conserved protein UCP025560 precursor	Hypothetical protein	Hypothetical protein precursor	Uncharacterised conserved protein UCP025560 precursor	Hypothetical protein	
ECOLI01343	Transcriptional activator feaR	Putative regulatory protein	AraC family regulatory protein	similar to SP:P36673, GB:U07790, PID:465107, PID:537083, GB:U00096, PID:1790689, and PID:1843456; identified by sequence similarity; putative transcriptional regulator, AraC family	Transcriptional regulator, AraC family	TRANSCRIPTIONAL REGULATOR, ARAC FAMILY	Possible transcriptional regulator, AraC family	Probable transcription regulator protein	AraC-type DNA-binding domain-containing protein	similar to BRA1154, transcriptional regulator, AraC family transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Helix-turn-helix, AraC type	Transcriptional regulator, AraC family	transcriptional regulator, AraC family	transcriptional regulator, AraC family	AraC family regulatory protein identified by match to protein family HMM PF00165	helix-turn-helix, AraC type	transcriptional regulator, AraC family	transcriptional regulator, AraC family	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: psb:Psyr_0008 helix-turn-helix, AraC type	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: bxe:Bxe_A2880 transcriptional regulator, AraC family	putative AraC-like transcriptional regulator Putative AraC family,transcriptional regulator, 28% Identity to TrEMBL;Q62GH5,Q6QEJ0,Q9HWT4 Has SMART;SM00342,HTH_ARAC, helix_turn_helix, arabinose operon control protein;IPR000005; Many bacterial transcription regulation proteins bind DNA through a 'helix-turn-helix' (HTH) motif. One major subfamily of these proteins is related to the arabinose operon regulatory protein AraC.  Except for celD all of these proteins seem to be positive transcriptional factors.Although the sequences belonging to this family differ somewhat in length, in nearly every case the HTH motif is situated towards the C-terminus in the third quarter of most of the sequences. The minimal DNA binding domain spans roughly 100 residues and comprises two HTH subdomains; the classical HTH domain and another HTH subdomain with similarity to the classical HTH domain but with an insertion of one residue in the turn-region. The N-terminal and central regions of these proteins are presumed to interact with effector molecules and may be involved in dimerization. Conserved hypothetical protein	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: nfa:nfa20960 putative transcriptional regulator	transcriptional regulator, AraC family identified by match to protein family HMM PF00165	Hypothetical protein	Putative transcriptional regulator	Putative transcriptional regulator	Transcriptional regulator, AraC family	Helix-turn-helix-domain containing protein AraC type	
ECOLI01344	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Betaine-aldehyde dehydrogenase	Betaine-aldehyde dehydrogenase	phenylacetaldehyde dehydrogenase identified by match to protein family HMM PF00171	Betaine-aldehyde dehydrogenase PFAM: aldehyde dehydrogenase KEGG: bur:Bcep18194_B0933 betaine-aldehyde dehydrogenase	Betaine-aldehyde dehydrogenase PFAM: aldehyde dehydrogenase KEGG: bcn:Bcen_3586 betaine-aldehyde dehydrogenase	phenylacetaldehyde dehydrogenase identified by match to protein family HMM PF00171	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Betaine-aldehyde dehydrogenase	Betaine-aldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	FeaB protein	Aldehyde dehydrogenase	Phenylacetaldehyde dehydrogenase	
ECOLI01345	Primary amine oxidase	Putative primary amine oxidase 1 [Source:GeneDB_Spombe;Acc:SPBC1289.16c]	DEHA2E02640p;similar to uniprot|Q6MYD7 Aspergillus fumigatus ao- 1 Copper amine oxidase 1 putative;	Amine oxidase (copper-containing) PFAM: copper amine oxidase KEGG: nfa:nfa27860 putative copper amine oxidase	Cu2+-containing amine oxidase	copper-containing amine oxidase go_function: copper ion binding	Amine oxidase	Copper methylamine oxidase	Copper methylamine oxidase	Lodderomyces elongisporus (LELG_01912.1) hypothetical protein similar to copper amine oxidase (translation)	Copper amine oxidase	Copper amine oxidase	Tyramine oxidase, copper-requiring	Copper amine oxidase	Amine oxidase (Copper-containing) precursor	jgi|Lacbi1|141735|gww1.1.119.1	Cu2+-containing amine oxidase	Copper amine oxidase	Copper amine oxidase	Copper amine oxidase	Copper amine oxidase	Copper amine oxidase	Copper amine oxidase	Copper amine oxidase	TynA protein	Copper amine oxidase	Primary amine oxidase	copper amine oxidase 1 (Broad)	tyramine oxidase, copper-requiring	
ECOLI01346	Protein maoC	PaaZ	Product confidence : putative Gene name confidence : putative putative aldehyde dehydrogenase protein	Putative dehydrogenase	similar to X97452-2|CAA66089.1| percent identity: 48 in 674 aa putative dehydrogenase	Putative aldehyde dehydrogenase	identified by similarity to SP:P77455; match to protein family HMM PF00171; match to protein family HMM PF01575 phenylacetic acid degradation protein PaaZ	Phenylacetic acid degradation protein PaaZ	Ring-opening enzyme	identified by match to protein family HMM PF00171; match to protein family HMM PF01575; match to protein family HMM TIGR02278 phenylacetic acid degradation protein PaaN	Phenylacetic acid degradation protein paaN	Phenylacetic acid degradation protein paaN	Phenylacetic acid degradation protein paaN TIGRFAM: Phenylacetic acid degradation protein paaN: (0) PFAM: aldehyde dehydrogenase: (1.2e-18) MaoC-like dehydratase: (8.9e-32) KEGG: dra:DR2381 aldehyde dehydrogenase, ev=0.0, 82% identity	Phenylacetic acid degradation protein paaN TIGRFAM: Phenylacetic acid degradation protein paaN: (0) PFAM: aldehyde dehydrogenase: (7.5e-33) MaoC-like dehydratase: (2.4e-23) KEGG: sil:SPO0735 phenylacetic acid degradation protein PaaZ, ev=0.0, 76% identity	Phenylacetic acid degradation protein paaN	Phenylacetic acid degradation protein paaN	Phenylacetic acid degradation protein paaN	NAD-dependent aldehyde dehydrogenase	phenylacetic acid degradation protein paaN TIGRFAM: phenylacetic acid degradation protein paaN PFAM: aldehyde dehydrogenase; MaoC domain protein dehydratase KEGG: nha:Nham_0934 phenylacetic acid degradation protein PaaN	phenylacetic acid degradation protein paaN TIGRFAM: phenylacetic acid degradation protein paaN PFAM: aldehyde dehydrogenase; MaoC domain protein dehydratase KEGG: cef:CE0677 putative dehydrogenase	phenylacetic acid degradation protein paaN TIGRFAM: phenylacetic acid degradation protein paaN PFAM: aldehyde dehydrogenase; MaoC domain protein dehydratase KEGG: rpc:RPC_0685 phenylacetic acid degradation protein PaaN	ring-opening enzyme Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9600981, 12534466, 15474299; Product type e : enzyme	Hypothetical protein	Phenylacetic acid degradation protein paaN	fused aldehyde dehydrogenase and enoyl-CoA hydratase PaaN TIGRFAM: phenylacetic acid degradation protein paaN PFAM: aldehyde dehydrogenase; MaoC domain protein dehydratase KEGG: ecj:JW1382 fused aldehyde dehydrogenase and enoyl-CoA hydratase	Aldehyde dehydrogenase	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein PaaN	Phenylacetic acid degradation protein paaN	
ECOLI01347	Phenylacetic acid degradation protein paaA	Putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein PaaA	Phenylacetic acid degradation protein paaA	Phenylacetic acid degradation protein PaaA	phenylacetic acid degradation protein PaaA	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Product confidence : putative Gene name confidence : putative putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein	ring-oxidation complex protein 1 (phenylacetic acid catabolism)	Putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein PaaA	similar to AF029714-9|AAC24334.1| percent identity: 65 in 315 aa putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein paaA	Ring-oxidation complex protein 1 in the phenylacetic acid catabolism pathway	SCBAC17A6.04, possible phenylacetic acid degradation protein PaaA, len: 328 aa: similar to many e.g. SW:P76077 (PAAA_ECOLI) phenylacetic acid degradation protein PaaA from Escherichia coli (309 aa) fasta scores; opt: 1540, Z-score: 1801.2, 69.967% identity (69.967% ungapped) in 303 aa overlap. putative phenylacetic acid degradation protein PaaA	Probable phenylacetic acid degradation protein	identified by similarity to GB:AAC24334.1; match to protein family HMM PF05138; match to protein family HMM TIGR02156 phenylacetic acid degradation protein PaaG	Phenylacetic acid degradation protein PaaA	phenylacetic acid catabolic protein	Ring-oxidation complex protein 1	identified by match to protein family HMM PF05138; match to protein family HMM TIGR02156 phenylacetate-CoA oxygenase, PaaG subunit	Phenylacetate-CoA oxygenase, PaaG subunit	Phenylacetate-CoA oxygenase, PaaG subunit	phenylacetic acid degradation protein	Phenylacetate-CoA oxygenase, PaaG subunit	Phenylacetate-CoA oxygenase, PaaG subunit	
ECOLI01348	Phenylacetic acid degradation protein paaB	Putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein PaaB	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Product confidence : putative Gene name confidence : putative putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein PaaB	similar to AJ278756-10|CAC10607.1| percent identity: 53 in 95 aa putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein paaB	SCBAC17A6.05, possible phenylacetic acid degradation protein PaaB, len: 103 aa: similar to many e.g. SW:P76078 (PAAB_ECOLI) phenylacetic acid degradation protein PaaB from Escherichia coli (95 aa) fasta scores; opt: 427, Z-score: 565.4, 66.667% identity (66.667% ungapped) in 90 aa overlap. putative phenylacetic acid degradation protein PaaB	Probable phenylacetic acid degradation protein	identified by similarity to SP:P76078; match to protein family HMM PF06243; match to protein family HMM TIGR02157 phenylacetic acid degradation protein PaaH	Phenylacetic acid degradation protein PaaB, putative	identified by match to protein family HMM PF06243; match to protein family HMM TIGR02157 phenylacetate-CoA oxygenase, PaaH subunit	Phenylacetic acid degradation B	phenylacetic acid degradation B	phenylacetic acid degradation protein	phenylacetic acid degradation B	Phenylacetic acid degradation B	Phenylacetic acid degradation B	phenylacetic acid degradation B PFAM: phenylacetic acid degradation B: (3.5e-66) KEGG: sil:SPO0756 phenylacetic acid degradation protein PaaH, ev=1e-45, 88% identity	phenylacetic acid degradation B	Phenylacetic acid degradation B	phenylacetic acid degradation B	phenylacetic acid degradation B	phenylacetate-CoA oxygenase, PaaH subunit TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit PFAM: phenylacetic acid degradation B KEGG: bur:Bcep18194_A3428 phenylacetic acid degradation B	Phenylacetate-CoA oxygenase, PaaH subunit	
ECOLI01349	Phenylacetic acid degradation protein paaC	Putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein PaaC	Phenylacetic acid degradation protein paaC	phenylacetic acid degradation protein PaaC	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Product confidence : putative Gene name confidence : putative putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein	ring-oxidation complex protein 2 (phenylacetic acid catabolism)	Putative phenylacetic acid degradation protein	similar to AL596248-6|CAC44651.1| percent identity: 42 in 262 aa putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein paaC	Ring-oxidation complex protein 2 in the phenylacetic acid catabolism pathway	SCBAC17A6.06, possible phenylacetic acid degradation protein PaaC, len: 275 aa: similar to many e.g. SW:P76079 (PAAC_ECOLI) phenylacetic acid degradation protein PaaC from Escherichia coli (248 aa) fasta scores; opt: 470, Z-score: 547.8, 41.057% identity (44.105% ungapped) in 246 aa overlap. putative phenylacetic acid degradation protein PaaC	identified by similarity to SP:P76079; match to protein family HMM PF05138; match to protein family HMM TIGR02158 phenylacetic acid degradation protein PaaI	Phenylacetic acid degradation protein PaaC	Ring-hydroxylation complex protein 2	identified by match to protein family HMM PF05138; match to protein family HMM TIGR02158 phenylacetate-CoA oxygenase, PaaI subunit	Phenylacetate-CoA oxygenase, PaaI subunit	Phenylacetate-CoA oxygenase, PaaI subunit	phenylacetic acid degradation protein	Phenylacetate-CoA oxygenase, PaaI subunit	Phenylacetate-CoA oxygenase, PaaI subunit TIGRFAM: Phenylacetate-CoA oxygenase, PaaI subunit: (3.2e-132) PFAM: phenylacetic acid catabolic: (5.3e-110) KEGG: dra:DR2384 phenylacetic acid degradation protein PaaC, ev=2e-98, 72% identity	Phenylacetate-CoA oxygenase, PaaI subunit TIGRFAM: Phenylacetate-CoA oxygenase, PaaI subunit: (5.4e-114) PFAM: phenylacetic acid catabolic: (1.1e-56) KEGG: sil:SPO0755 phenylacetic acid degradation protein PaaI, ev=1e-116, 79% identity	Phenylacetate-CoA oxygenase, PaaI subunit	Phenylacetate-CoA oxygenase, PaaI subunit	Phenylacetate-CoA oxygenase, PaaI subunit	
ECOLI01350	Phenylacetic acid degradation protein paaD	Putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein PaaD	Phenylacetic acid degradation protein paaD	Phenylacetic acid degradation protein PaaD	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Product confidence : putative Gene name confidence : putative putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein	ring-oxidation complex protein 3 (phenylacetic acid catabolism)	Putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein PaaD	similar to AL596248-7|CAC44652.1| percent identity: 44 in 166 aa putative phenylacetic acid degradation protein	Putative phenylacetic acid degradation protein PaaD	Ring-oxidation complex protein 3 in the phenylacetic acid catabolism pathway	SCBAC17A6.07, possible phenylacetic acid degradation protein PaaD, len: 170 aa: similar to many e.g. SW:P76080 (PAAD_ECOLI) phenylacetic acid degradation protein PaaD from Escherichia coli (167 aa) fasta scores; opt: 474, Z-score: 518.6, 45.395% identity (47.586% ungapped) in 152 aa overlap. Contains Pfam match to entry PF01883 DUF59, Domain of unknown function DUF59. putative phenylacetic acid degradation protein PaaD	Probable phenylacetic acid degradation protein	identified by similarity to SP:P76080; match to protein family HMM PF01883; match to protein family HMM TIGR02159 phenylacetic acid degradation protein PaaJ	Phenylacetic acid degradation protein PaaD	Ring-hydroxylation complex protein 3	identified by match to protein family HMM PF01883; match to protein family HMM TIGR02159 phenylacetate-CoA oxygenase, PaaJ subunit	Phenylacetate-CoA oxygenase, PaaJ subunit	Phenylacetate-CoA oxygenase, PaaJ subunit	phenylacetic acid degradation protein start codon not provided	Phenylacetate-CoA oxygenase, PaaJ subunit	Phenylacetate-CoA oxygenase, PaaJ subunit	Phenylacetate-CoA oxygenase, PaaJ subunit TIGRFAM: Phenylacetate-CoA oxygenase, PaaJ subunit: (3.9e-97) PFAM: protein of unknown function DUF59: (2.3e-33) KEGG: dra:DR2383 phenylacetic acid degradation protein PaaD, ev=3e-68, 77% identity	Phenylacetate-CoA oxygenase, PaaJ subunit	
ECOLI01351	Probable phenylacetic acid degradation NADH oxidoreductase paaE	PaaE protein	similar to sp|P36060 Saccharomyces cerevisiae YKL150w MCR1 cytochrome-b5 reductase, start by similarity	DEHA2C07238p;similar to uniprot|P38626 Saccharomyces cerevisiae YIL043c CBR1 cytochrome-b5 reductase;	Putative phenylacetic acid degradation NADH oxidoreductase	Oxidoreductase FAD-binding family protein	Probable phenylacetic acid degradation NADH oxidoreductase PaaE	pseudo	go_component: microsome [goid 0005792]; go_function: cytochrome-b5 reductase activity [goid 0004128]; go_process: electron transport [goid 0006118] NADH-cytochrome b5 reductase, putative	Product confidence : putative Gene name confidence : putative putative ferredoxin reductase electron transfer component protein	Putative phenylacetic acid degradation NADH oxidoreductase	Phenylacetic acid degradation NADH oxidoreductase PaaE	similar to AL596248-8|CAC44653.1| percent identity: 43 in 380 aa putative phenylacetic acid degradation NADH oxidoreductase	Putative 2Fe:2S ferredoxin	SCBAC17A6.08, possible phenylacetic acid degradation NADH oxidoreductase PaaE, len: 368 aa; similar to many e.g. SW:P76081 (PAAE_ECOLI) probable phenylacetic acid degradation NADH oxidoreductase PaaE from Escherichia coli (356 aa) fasta scores; opt: 871, Z-score: 943.6, 39.943% identity (40.870% ungapped) in 353 aa overlap.  Contains Pfam match to entry PF00111 fer2, 2Fe-2S iron-sulfur cluster binding domains; Pfam match to entry PF00175 NAD_binding, Oxidoreductase FAD/NAD-binding domain; Pfam match to entry PF00970 FAD_binding_6, Oxidoreductase FAD-binding domain and Prosite match to PS00197 2Fe-2S ferredoxins, iron-sulfur binding region signature. putative phenylacetic acid degradation NADH oxidoreductase PaaE	Ferredoxin-like protein	Probable ferredoxin reductase protein	identified by similarity to SP:P76081; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02160 phenylacetic acid degradation oxidoreductase PaaK	Ring-hydroxylation complex protein 4	go_component: microsome [goid 0005792]; go_function: cytochrome-b5 reductase activity [goid 0004128]; go_process: electron transport [goid 0006118] NADH-cytochrome b5 reductase	probable ring-hydroxylation complex protein 4	identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02160 phenylacetate-CoA oxygenase, PaaK subunit	Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region	ferredoxin	probable phenylacetic acid degradation NADH oxidoreductase	Phenylacetate-CoA oxygenase/reductase, PaaK subunit	Phenylacetate-CoA oxygenase/reductase, PaaK subunit	Phenylacetate-CoA oxygenase/reductase, PaaK subunit	
ECOLI01352	Probable enoyl-CoA hydratase paaF	Probable enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase	Enoyl-CoA hydratase protein	enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/isomerase	probable enoyl-CoA hydratase Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or3)-enoyl-CoA + H2O. Entry name TREMBL:Q7VU52 Prim. accession # Q7VU52 Identities = 124/266 (46%) Prediction: Non-secretory protein Signal peptide probability: 0.000 Number of predicted TMHs: 0 High confidence in function and specificity	putative enoyl-CoA hydratase/isomerase family protein	enoyl-CoA hydratase/isomerase PhaA Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9600981, 12534466, 15474299; Product type e : enzyme	Enoyl-CoA hydratase/carnithine racemase	Short chain enoyl-CoA hydratase	Probable enoyl-CoA hydratase	Enoyl-CoA hydratase/isomerase family protein	Probable enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase KEGG: pen:PSEEN2791 enoyl-CoA hydratase/isomerase PhaA	Enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase-isomerase	Enoyl-CoA hydratase/isomerase family protein	Enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase KEGG: rrs:RoseRS_2302 enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/carnithine racemase	Enoyl-CoA hydratase, phenylacetic acid degradation	Enoyl-CoA hydratase PaaF	Enoyl-CoA hydratase PaaF	Enoyl-CoA hydratase	Enoyl-coA hydratase	Probable enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase-isomerase	
ECOLI01353	Probable enoyl-CoA hydratase paaG	Probable enoyl-CoA hydratase	Product confidence : putative Gene name confidence : putative putative enoyl-CoA hydratase protein	Probable enoyl-CoA hydratase	identified by similarity to SP:P77467; match to protein family HMM PF00378 enoyl-CoA hydratase/isomerase PaaB	Enoyl-CoA hydratase/isomerase PhaB	putative enoyl-CoA hydratase	Phenylacetate degradation probable enoyl-CoA hydratase paaB	Phenylacetate degradation probable enoyl-CoA hydratase paaB	enoyl-CoA hydratase paaB	Short chain enoyl-CoA hydratase , Enoyl-CoA hydratase	Phenylacetate degradation probable enoyl-CoA hydratase paaB TIGRFAM: Phenylacetate degradation probable enoyl-CoA hydratase paaB: (5.6e-147) PFAM: Enoyl-CoA hydratase/isomerase: (5.8e-49) KEGG: sil:SPO0740 enoyl-CoA hydratase/isomerase PaaB, ev=1e-107, 74% identity	Phenylacetate degradation, enoyl-CoA hydratase paaB	phenylacetate degradation probable enoyl-CoA hydratase paaB TIGRFAM: phenylacetate degradation probable enoyl-CoA hydratase paaB PFAM: Enoyl-CoA hydratase/isomerase KEGG: bur:Bcep18194_A3628 enoyl-CoA hydratase	Enoyl-CoA hydratase/carnithine racemase	phenylacetate degradation probable enoyl-CoA hydratase paaB TIGRFAM: phenylacetate degradation probable enoyl-CoA hydratase paaB PFAM: Enoyl-CoA hydratase/isomerase KEGG: bcn:Bcen_2564 phenylacetate degradation probable enoyl-CoA hydratase PaaB	probable enoyl-CoA hydratase Probable enoyl-CoA hydratase. Homology to paaG of E.  coli of 60% (sprot|PAAG_ECOLI(SRS) COULD POSSIBLY OXIDIZES FATTY ACIDS USING SPECIFIC COMPONENTS (BY SIMILARITY).  Activity:- (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O. Interpro: Enoyl-CoA hydratase/isomerase (IPR001753) Pfam: Enoyl-CoA hydratase/isomerase no signal peptide no TMHs High confidence in function and specificity	phenylacetate degradation enoyl-CoA hydratase paaB TIGRFAM: phenylacetate degradation probable enoyl-CoA hydratase paaB PFAM: Enoyl-CoA hydratase/isomerase KEGG: rpc:RPC_0681 enoyl-CoA hydratase PaaB	enoyl-CoA hydratase/isomerase PhaB Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9600981, 12534466, 15474299; Product type e : enzyme	Putative enoyl-CoA hydratase II	Enoyl-CoA hydratase	predicted protein go_function: catalytic activity; go_process: metabolism	Enoyl-CoA hydratase/isomerase	Phenylacetate degradation probable enoyl-CoA hydratase paaB	Enoyl-CoA hydratase	Enoyl-CoA hydratase	Phenylacetate degradation probable enoyl-CoA hydratase paaB	Enoyl-CoA hydratase probably involved in phenylacetate degradation	Phenylacetate degradation	
ECOLI01354	Probable 3-hydroxybutyryl-CoA dehydrogenase	Putative 3-hydroxyacyl-CoA dehydrogenase	identified by match to PFAM protein family HMM PF02737 3-hydroxyacyl-CoA dehydrogenase family protein	3-hydroxyacyl-CoA dehydrogenase	SCH69.04c, probable 3-Hydroxyacyl-CoA dehydrogenase, len: 504aa; similar to many eg. TR:O84980 (EMBL:AF029714) PhaC, 3-Hydroxyacyl-CoA dehydrogenase from Pseudomonas putida (505 aa) fasta scores; opt: 1512, z-score: 1634.7, E(): 0, (50.0% identity in 498 aa overlap). Contains Pfam match to entry PF00725 3HCDH, 3-hydroxyacyl-CoA dehydrogenase. putative 3-Hydroxyacyl-CoA dehydrogenase	3-hydroxyacyl-CoA dehydrogenase PaaC	3-Hydroxyacyl-CoA dehydrogenase PaaH involved in aerobic phenylacetate metabolism	3-hydroxybutyryl-CoA dehydrogenase	3-hydroxyacyl-CoA dehydrogenase precursor	3-hydroxybutyryl-CoA dehydrogenase PFAM: 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding KEGG: sth:STH214 3-hydroxyacyl-CoA dehydrogenase	3-hydroxybutyryl-CoA dehydrogenase	3-hydroxybutyryl-CoA dehydrogenase	3-hydroxybutyryl-CoA dehydrogenase PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding KEGG: bur:Bcep18194_B1317 3-hydroxybutyryl-CoA dehydrogenase	3-hydroxyacyl-CoA dehydrogenase PaaC KEGG: pen:PSEEN2793 3-hydroxyacyl-CoA dehydrogenase PhaC TIGRFAM: 3-hydroxyacyl-CoA dehydrogenase PaaC PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding	3-hydroxybutyryl-CoA dehydrogenase precursor	3-hydroxybutyryl-CoA dehydrogenase PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding KEGG: bcn:Bcen_3838 3-hydroxybutyryl-CoA dehydrogenase	probable 3-hydroxybutyryl-CoA dehydrogenase Activity:-3-acetoacetyl-CoA + NADPH = (S)-3-hydroxybutanoyl-CoA + NADP+ Entry name TREMBL:Q9F9V1 InterPro IPR006108; 3HCDH_C. IPR006176; 3HCDH_N. IPR008927; 6DGDH_C_like. IPR002110; ANK. IPR000205; NAD_BS. Pfam PF00725; 3HCDH; 2. PF02737; 3HCDH_N; 1. Identities = 344/510 (67%) Prediction: Signal peptide Signal peptide probability: 0.660 Number of predicted TMHs: 1 High confidence in function and specificity	3-hydroxyacyl-CoA dehydrogenase	3-hydroxybutyryl-CoA dehydrogenase PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding KEGG: sma:SAV2870 putative 3-hydroxyacyl-CoA dehydrogenase	3-hydroxybutyryl-CoA dehydrogenase	3-hydroxybutyryl-CoA epimerase	3-hydroxyacyl-CoA dehydrogenase phaC Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9600981, 12534466, 15474299; Product type e : enzyme	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase	PaaC	3-hydroxybutyryl-CoA dehydrogenase PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding KEGG: pen:PSEEN2793 3-hydroxyacyl-CoA dehydrogenase PhaC	3-hydroxyacyl-CoA dehydrogenase, NAD-binding PFAM: 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding KEGG: ppu:PP3282 3-hydroxyacyl-CoA dehydrogenase PaaC	Bifunctional 3-hydroxyacyl-CoA dehydrogenase, 3- hydroxybutyryl-CoA epimerase	3-hydroxyacyl-CoA dehydrogenase family protein	3-hydroxyacyl-CoA dehydrogenase precursor	
ECOLI01355	Phenylacetic acid degradation protein paaI	Phenylacetic acid degradation protein	Phenylacetic acid degradation paaI protein homolog	Phenylacetic acid degradation protein	Putative esterase AF_2264	Putative phenylacetic acid degradation protein	Putative esterase DR_2321	Probable phenylacetic acid degradation protein	Putative phenylacetic acid degradation protein	Phenylacetic acid degradation protein PaaI	phenylacetic acid degradation protein PaaI	Putative uncharacterized protein	Phenylacetic acid degradation protein PaaI	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Phenylacetic acid degradation protein	Putative thioesterase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	similar to AF176259-6|AAG28967.1| percent identity: 31 in 140 aa putative phenylacetic acid degradation protein	Putative phenylacetic acid degredation protein	SCBAC17A6.03c, possible phenylacetic acid degradation protein PaaI, len: 170 aa: similar to many e.g. SW:P76084 (PAAI_ECOLI) phenylacetic acid degradation protein PaaI from Escherichia coli (140 aa) fasta scores; opt: 342, Z-score: 414.6, 45.902% identity (46.281% ungapped) in 122 aa overlap. Contains Pfam match to entry PF02584 DUF157, Uncharacterized protein PaaI. putative phenylacetic acid degradation protein PaaI	Uncharacterized protein, possibly involved in aromatic compounds catabolism	Probable phenylacetic acid degradation protein	Thioesterase superfamily protein	identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369 phenylacetic acid degradation protein PaaD	Phenylacetic acid degradation protein PaaI	Putative uncharacterized protein gbs1210	
ECOLI01356	Beta-ketoadipyl-CoA thiolase	acetyl-CoA acetyltransferase	Putative acyl-CoA thiolase	Similar to beta-ketoadipyl CoA thiolase	identified by similarity to SP:Q51956; match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 beta-ketoadipyl CoA thiolase	Beta-ketoadipyl CoA thiolase	Beta-ketoadipyl CoA thiolase PhaD	Beta-ketoadipyl CoA thiolase	Acetyl-CoA C-acetyltransferase	Beta-ketoadipyl CoA thiolase	beta-ketoadipyl CoA thiolase	beta-ketoadipyl CoA thiolase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; match to protein family HMM TIGR02430	beta-ketoadipyl CoA thiolase KEGG: bur:Bcep18194_A3629 acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase PFAM: Thiolase	beta-ketoadipyl CoA thiolase KEGG: eba:ebA5729 putative 3-ketoadipyl-CoA thiolase TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase PFAM: Thiolase	beta-ketoadipyl CoA thiolase KEGG: bcn:Bcen_2563 beta-ketoadipyl CoA thiolase TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase PFAM: Thiolase	Beta-ketoadipyl-CoA thiolase	beta-ketoadipyl CoA thiolase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9600981, 12534466, 15474299; Product type e : enzyme	Thiolase	beta-ketoadipyl CoA thiolase KEGG: ecj:JW1392 predicted beta-ketoadipyl CoA thiolase TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase PFAM: Thiolase	Beta-ketoadipyl CoA thiolase	Beta-ketoadipyl CoA thiolase	Beta-ketoadipyl CoA thiolase	Acetyl-CoA acetyltransferase	Beta-ketoadipyl CoA thiolase	Beta-ketoadipyl CoA thiolase	Beta-ketoadipyl CoA thiolase	Beta-ketoadipyl CoA thiolase	Beta-ketoadipyl CoA thiolase	Beta-ketoadipyl CoA thiolase	
ECOLI01357	Phenylacetate-coenzyme A ligase	Coenzyme F390 synthetase	CoA-ligase , coenzyme F390 synthetase, putative	Coenzyme F390 synthetase	Coenzyme F390 synthetase	Coenzyme F390 synthetase II	Phenylacetate-coenzyme A ligase	Phenylacetyl-coenzyme A ligase	Putative phenylacetate:CoA ligase	hypothetical phenylacetyl-CoA ligase	Phenylacetyl-CoA ligase	Phenylacetyl-CoA ligase	Phenylacetate-coenzyme A ligase	Phenylacetate-coenzyme A ligase	phenylacetyl-coenzyme A ligase	Phenylacetate-coenzyme A ligase	Phenylacetate-coenzyme A ligase	Putative coenzyme A ligase	best DB hits: BLAST: gb:AAB89578.1; (AE000988) coenzyme F390 synthetase (ftsA-2); E=6e-37 pir:A69082; coenzyme F390 synthetase III - Methanobacterium; E=2e-36 pir:B69115; coenzyme F390 synthetase II - Methanobacterium; E=7e-36 COG: AF1671; COG1541 Coenzyme F390 synthetase; E=6e-38 coenzyme F390 synthetase (ftsA-2)	Phenylacetate-coenzyme A ligase	COENZYME F390 SYNTHETASE II	Putative phenylacetate-CoA synthetase	Phenylacetate-coenzyme A ligase	similar to X97452-13|CAA66100.1| percent identity: 58 in 431 aa putative phenylacetate-CoA ligase	Phenylacetyl-CoA ligase	Phenylacetyl-CoA ligase in the phenylacetic acid catabolic pathway	SCBAC17A6.02c, phenylacetate-CoA ligase, len: 448 aa: strongly similar to many e.g. TR:Q9L9C1 (EMBL:AF176259) aerobic phenylacetate-CoA ligase from Azoarcus evansii (440 aa) fasta scores; opt: 1896, Z-score: 2065.6, 63.825% identity (64.871% ungapped) in 434 aa overlap. Contains 2 Pfam matches to entry PF00501 AMP-binding, AMP-binding enzyme. phenylacetate-CoA ligase	Phenylacetate-coenzyme A ligase	identified by similarity to GB:AAF26285.1; match to protein family HMM TIGR02155 phenylacetate-CoA ligase	
ECOLI01358	Phenylacetic acid degradation operon negative regulatory protein paaX	Putative regulatory protein	PhaN	Phenylacetic acid degradation operon negative regulatory protein	Phenylacetic acid degradation operon negative regulatory protein	Transcriptional regulatory protein, repressor- type	Product confidence : putative Gene name confidence : putative putative regulator of phenylacetic acid degradation, ArsR family protein	Phenylacetic acid degradation operon negative regulatory protein	repressor in the phenylacetic acid catabolism	Repressor in the phenylacetic acid catabolic pathway	SCBAC16H6.17c, possible regulator, len: 281 aa: weakly similar to SW:P76086 (PAAX_ECOLI) phenylacetic acid degradation repressor protein from Escherichia coli (316 aa) fasta scores; opt: 266, Z-score: 305.3, 26.071% identity (28.077% ungapped) in 280 aa overlap. putative regulator	identified by similarity to SP:P76086 PaaX domain protein	Probable repressor, phenylacetic acid catabolic pathway	phenylacetic acid degradation operon negative regulatory protein	Phenylacetic acid degradation transcriptional repressor	PadR protein, putative regulator of anaerobic phenylacetate metabolism	identified by similarity to SP:P76086; match to protein family HMM PF07848; match to protein family HMM TIGR02277 phenylacetic acid degradation operon negative regulatory protein PaaX	Phenylacetic acid degradation operon negative regulatory protein paaX	Phenylacetic acid degradation operon negative regulatory protein paaX	phenylacetic acid degradation operon negative regulatory protein	Phenylacetic acid degradation operon negative regulatory protein paaX	PaaX-like PFAM: PaaX-like: (1.1e-10) KEGG: sil:SPO0734 PaaX domain protein, ev=2e-66, 50% identity	Phenylacetic acid degradation operon negative regulatory protein paaX	Phenylacetic acid-responsive transcriptional repressor	PaaX domain protein PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain KEGG: sme:SMb21641 putative regulator of phenylacetic acid degradation, ArsR family protein	phenylacetic acid degradation operon negative regulatory protein PaaX TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain KEGG: rpc:RPC_0692 phenylacetic acid degradation operon negative regulatory protein PaaX	transcriptional repressor for phenylacetic acid degradation Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9600981, 12534466; Product type r : regulator	Phenylacetic acid degradation operon negative regulatory protein paaX	PaaX	
ECOLI01359	Phenylacetic acid degradation protein paaY	Carbonic anhydrase/acetyltransferase cytoplasmic protein	Carbonic anhydrase/acetyltransferase cytoplasmic protein	probable phenyl acetic acid degradation protein pathway:carnitine metabolism (conversion of carnitine to gamma-butyrobetaine). TREMBL:Q9F9V3: 71% identity, 83% similarity similarity:belongs to the transferase hexapeptide repeat family Carnitine operon protein caiE. InterPro:IPR001451; Hexapep_transf.  Pfam:PF00132; Hexapep InterPro: Bacterial transferase hexapeptide repeat TIGR00094: conserved hypothetical protein High confidence in function and specificity	transferase hexapeptide repeat containing protein PFAM: transferase hexapeptide repeat containing protein KEGG: neu:NE1207 bacterial transferase hexapeptide repeat	Carbonic anhydrases/acetyltransferases isoleucine patch superfamily	Phenylacetic acid degradation protein; putative transferase	Phenylacetic acid degradation protein PaaY	Phenylacetic acid degradation protein PaaY	Predicted hexapeptide repeat acetyltransferase	Phenylacetic acid degradation protein PaaY	Phenylacetic acid degradation protein PaaY	Putative uncharacterized protein	Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily	Phenylacetic acid degradation protein, possible acetyltransferase	Carbonic anhydrase/acetyltransferase	Carbonic anhydrase/acetyltransferase	Carbonic anhydrase	Acetyltransferase/acyltransferase	Possible siderophore-binding protein	Phenylacetic acid degradation protein PaaY	Putative uncharacterized protein	Phenylacetic acid degradation protein PaaY	PaaY	Phenylacetic acide degration protein PaaY	Bacterial transferase hexapeptide repeat protein	Putative hexapeptide repeat acetyltransferase	pseudo	Putative hexapeptide repeat acetyltransferase	
ECOLI01533	pseudo	Code: L; COG: COG2801 IS2 ORF2	
ECOLI01533	pseudo	Code: L; COG: COG2801 IS2 ORF2	

ECOLI04127	Transposase insI for insertion sequence element IS30B/C/D	Transposase	Putative transposase	Transposase insI for insertion sequence element IS30B/C/D	glimmer prediction; similarity to integrase core domain TRm24 transposase	Transposase, ISlxx5	Putative uncharacterized protein	Putative uncharacterized protein gbs0208	Similar to Bacteroides fragilis transposase for insertion sequence element IS4351 SWALL:TRA4_BACFR (SWALL:P37247) (326 aa) fasta scores: E(): 6.7e-44, 45% id in 320 aa, to Neisseria meningitidis putative transposase for IS1655 NMA1486 and NMA1481 SWALL:Q9JS36 (EMBL:AL162756) (321 aa) fasta scores: E(): 3.7e-36, 39.55% id in 316 aa, and to Alcaligenes eutrophus transposase for insertion sequence element IS1086 SWALL:TRA8_ALCEU (SWALL:P37248) (339 aa) fasta scores: E(): 3.3e-20, 33.33% id in 327 aa putative IS element	transposase for IS1513e	Integrase, catalytic region	similar to gi|2673748|emb|CAA05973.1| [Lactobacillus casei], percent identity 49 in 332 aa, BLASTP E(): 2e-77 transposase	Integrase	Integrase, catalytic region PFAM: Integrase, catalytic region KEGG: pfo:Pfl_2765 integrase, catalytic region	Integrase, catalytic region	putative transcriptional regulator, Fis family	Integrase	Integrase, catalytic region	Transposase, IS30 family	transposase, putative	Putative transposase IS30	Transposase	Hypothetical protein	Hypothetical protein	Transposase IS30	Integrase, catalytic region PFAM: Integrase, catalytic region KEGG: cbu:CBU_1544 transposase, IS30 family	Hypothetical protein	Transposase	Putative uncharacterized protein	

ECOLI01360	Putative oxidoreductase ydbC	Hypothetical oxidoreductase ydbC	Oxidoreductase, aldo/keto reductase family	Putative oxidoreductase	Putative dehydrogenase	probable oxidoreductase	SC5G9.08, possible oxidoreductase, len: 294 aa; shows weak similarity to TR:P06632 (EMBL:M12799) Corynebacterium sp. 2,5-diketo-D-gluconic acid reductase (278 aa), fasta scores; opt: 196 z-score: 229.3 E(): 2.1e-05, 27.6% identity in 286 aa overlap. Similar to many hypothetical oxidoreductases e.g. SW:YDBC_ECOLI (EMBL:X62680), YbcD, Escherichia coli hypothetical oxidoreductase (286 aa) (63.3% identity in 283 aa overlap). Also similar to SC5H1.28C (EMBL:AL049863) Streptomyces coelicolor putative oxidoreductase (305 aa) (46.5% identity in 301 aa overlap) putative oxidoreductase	Oxidoreductase protein	Putative oxidoreductase	Aldo/keto reductase	Aldo/keto reductase	putative aldo-keto reductase similarity:fasta; SWALL:Q6W123 (EMBL:AY316747); Rhizobium sp.; probable oxidoreductase; length 293 aa; 290 aa overlap; query 1-290 aa; subject 1-290 aa	putative oxidoreductase	aldo/keto reductase	probable oxidoreductase protein, aldo-keto aldolase family Similar to mlr2172 [Mesorhizobium loti] and AGR_L_2047p [Agrobacterium tumefaciens] Similar to swissprot:Q98IZ9 Putative location:bacterial cytoplasm Psort-Score: 0.3354	Hypothetical oxidoreductase YdbC	Putative dehydrogenase	aldo/keto reductase PFAM: aldo/keto reductase KEGG: ret:RHE_PC00204 probable oxidoreductase protein, aldo-keto aldolase family	aldo/keto reductase PFAM: aldo/keto reductase KEGG: aba:Acid345_0299 aldo/keto reductase	putative oxidoreductase YdbC identified by match to protein family HMM PF00248	Aldo/keto reductase	aldo/keto reductase PFAM: aldo/keto reductase KEGG: mlo:mlr2172 probable oxidoreductase	aldo/keto reductase PFAM: aldo/keto reductase KEGG: mmc:Mmcs_4872 aldo/keto reductase	aldo/keto reductase PFAM: aldo/keto reductase KEGG: mmc:Mmcs_5322 aldo/keto reductase	Putative oxidoreductase YdbC	putative dehydrogenase	Putative aldo/keto reductase	Probable oxidoreductase protein, aldo-keto aldolase family	Putative oxidoreductase	
ECOLI01361	Uncharacterized protein ydbD	Residues 59 to 782 of 782 are 97 pct identical to residues 45 to 768 of a 768 aa protein YDBD_ECOLI sp: P25907 orf, conserved hypothetical protein	conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydbD	Putative uncharacterized protein ydbD	Putative uncharacterized protein ydbD	Putative uncharacterized protein ydbD	YdbD protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI01362	Inner membrane protein ynbA	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-alcohol phosphatidyltransferase	CDP-alcohol phosphatidyltransferase	Phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	Putative uncharacterized protein	Probable CDP-alcohol phosphatidyltransferase	Hypothetical protein ynbA	CDP-alcohol phosphatidyltransferase family protein	Probable enzyme	Residues 1 to 203 of 203 are 96 pct identical to residues 1 to 203 of a 203 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287757.1 probable enzyme	Putative CDP-alcohol phosphatidyltransferase	Complete genome; segment 16/17	CDP-alcohol phosphatidyltransferase	Putative CDP-alcohol phosphatidyltransferase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative CDP-alcohol phosphatidyltransferase	CDP-alcohol phosphatidyltransferase	identified by match to protein family HMM PF01066 CDP-alcohol phosphatidyltransferase family protein	CDP-alcohol phosphatidyltransferase	CDP-alcohol phosphatidyltransferase	CDP-alcohol phosphatidyltransferase	Phosphatidylglycerophosphate synthase	CDP-alcohol phosphatidyltransferase	Code: I; COG: COG0558 probable enzyme	CDP-alcohol phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	probable CDP-alcohol phosphatidyltransferase protein similar to PA2541 [Pseudomonas aeruginosa PA01] Similar to swissprot:Q9I0U3 Putative location:bacterial inner membrane Psort-Score: 0.3909; go_function: transferase activity [goid 0016740]; go_process: phospholipid biosynthesis [goid 0008654]	Putative CDP-alcohol phosphatidyltransferase	
ECOLI01363	Uncharacterized protein ynbB	Phosphatidate cytidiltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Probable phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Hypothetical protein ynbB	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	PMID: 2995359 PMID: 8557688 best DB hits: BLAST: gb:AAG56370.1; AE005365_4 (AE005365) putative phosphatidate; E=4e-24 swissprot:P76091; YNBB_ECOLI HYPOTHETICAL 33.1 KD PROTEIN IN; E=3e-22 pir:H82138; probable phosphatidate cytidylyltransferase VC1936; E=5e-22 COG: ynbB; COG0575 CDP-diglyceride synthetase; E=3e-23 PFAM: PF01148; Phosphatidate cytidylyltransfe; E=4.9e-16 phosphatidate cytidylyltransferase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	Phosphatidate cytidylyltransferase	CDP-diglyceride synthetase	Residues 1 to 247 of 247 are 95 pct identical to residues 52 to 298 of a 298 aa protein from Escherichia coli K12 ref: NP_415927.1 putative phosphatidate cytidiltransferase	Phosphatidate cytidylyltransferase	phosphatidate cytidylyltransferase	Similar to putative phosphatidate cytidylyltransferase YnbB of Escherichia coli	Phosphatidate cytidylyltransferase protein	Phosphatidate cytidiltransferase	Phosphatidate cytidylyltransferase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative phosphatidate cytidylyltransferase	Similar to Vibrio cholerae phosphatidate cytidylyltransferase, putative VC1936 SWALL:Q9KQR2 (EMBL:AE004269) (310 aa) fasta scores: E(): 1.4e-56, 47.26% id in 311 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri phosphatidate cytidylyltransferase CdsA or Cds or B0175 or Z0186 or ECS0177 or SF0165 or S0168 SWALL:CDSA_ECOLI (SWALL:P06466) (249 aa) fasta scores: E(): 8.1e-16, 43.75% id in 128 aa putative cytidylyltransferase	phosphatidate cytidiltransferase	Phosphatidate cytidylyltransferase	identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG0575 putative phosphatidate cytidylyltransferase synthase	
ECOLI01364	Uncharacterized protein ynbC	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein ynbC	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 585 of 585 are 97 pct identical to residues 1 to 585 of a 585 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287755.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative methylase	conserved hypothetical protein	conserved hypothetical protein	Alpha/beta hydrolase fold	Code: QR; COG: COG0500 conserved hypothetical protein	Alpha/beta hydrolase fold	Putative uncharacterized protein	Code: QR; COG: COG0500 conserved hypothetical protein	Alpha/beta hydrolase	Code: QR; COG: COG0500; orf conserved hypothetical protein	Alpha/beta hydrolase fold	putative esterase/lipase/thioesterase family protein	putative hydrolase protein similar to XCC0500 [Xanthomonas campestris pv.  campestris str. ATCC 33913] and FN1306 [Fusobacteriumnucleatum subsp. nucleatum ATCC 25586] Similar to swissprot:Q8PD45 Putative location:bacterial inner membrane Psort-Score: 0.1617; go_function: catalytic activity [goid 0003824]; go_function: S-adenosylmethionine-dependent methyltransferase activity [goid 0008757]; go_function: methyltransferase activity [goid 0008168]	Putative uncharacterized protein	Hypothetical protein	Putative methylase	alpha/beta hydrolase fold PFAM: alpha/beta hydrolase fold KEGG: bur:Bcep18194_A4520 alpha/beta hydrolase	Hypothetical protein	alpha/beta hydrolase fold PFAM: alpha/beta hydrolase fold KEGG: bcn:Bcen_0893 alpha/beta hydrolase fold	
ECOLI01365	Uncharacterized protein ynbD	Putative uncharacterized protein	Hypothetical protein ynbD	Dual specificity phosphatase, catalytic domain protein	Putative enzymes	Putative dual specificity phosphatase	Putative uncharacterized protein	Putative dual specificity phosphatase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative phosphatase	conserved hypothetical protein	identified by match to protein family HMM PF00782; match to protein family HMM PF01569 dual specificity phosphatase, catalytic domain protein	Phosphoesterase, PA-phosphatase related:Dual specificity protein phosphatase	Code: I; COG: COG0671 putative enzyme	Membrane-associated phospholipid phosphatase	Code: I; COG: COG0671 putative enzyme	dual specificity protein phosphatase	putative enzyme; Code: I; COG: COG0671 YnbD	Dual specificity protein phosphatase	putative membrane-associated phosphatase	putative phosphatase protein similar to XAC0516 [Xanthomonas axonopodis pv. citri str. 306] and PSPTO5538 [Pseudomonas syringae pv.tomato str. DC3000] Similar to entrez-protein:NP_640869.1 Putative location:bacterial inner membrane Psort-Score: 0.4715	Putative dual specificity phosphatase	Putative dual specificity phosphatase	Putative enzyme YnbD	dual specificity protein phosphatase PFAM: Dual specificity protein phosphatase KEGG: bur:Bcep18194_A4521 dual specificity protein phosphatase	Dual specificity phosphatase	dual specificity protein phosphatase PFAM: Dual specificity protein phosphatase KEGG: bcn:Bcen_0894 dual specificity protein phosphatase	conserved hypothetical protein Entry name:- Q9I0U5 Primary accession number:-Q9I0U5 InterPro:- IPR008934; AcPase_VanPerase. IPR000340; DS_phosphatase. IPR000326; PA_PTPase. Number of predicted TMHs: 8 Prediction: Non-secretory protein Signal peptide probability: 0.061 IPR000387; TYR_phosphatase. Pfam PF00782; DSPc; 1. PF01569; PAP2; 1. Identity:- 58%	putative dual specificity phosphatase	putative tyrosine phosphatase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	
ECOLI01366	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase 2	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase 2	FMN-dependent NADH-azoreductase 2	FMN-dependent NADH-azoreductase 2	putative acyl carrier protein phosphodiesterase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	probable acyl-carrier phosphodiesterase	FMN-dependent NADH-azoreductase 2	FMN-dependent NADH-azoreductase 1	SCJ4.27, possible hydrolase, len: 220 aa; similar to SW:ACPD_ECOLI acyl carrier protein phosphodiesterase (200 aa) fasta scores; opt: 272, z-score: 336.5, E(): 2.2e-11, (33.2% identity in 193 aa overlap) putative hydrolase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase 2	Residues 1 to 201 of 201 are 99 pct identical to residues 1 to 201 of a 201 aa protein from Escherichia coli K12 ref: NP_415930.1 acyl carrier protein phosphodiesterase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase	FMN-dependent NADH-azoreductase 2	acyl carrier protein phosphodiesterase	
ECOLI01367	ATP-dependent RNA helicase hrpA	ATP dependent RNA helicase	ATP-dependent RNA helicase hrpA homolog	Putative ATP-dependent helicase	ATP-dependent helicase	ATP-dependent RNA helicase HrpA, truncation	HrpA	Probable ATP-dependent helicase	ATP-dependent helicase HrpA	ATP-dependent helicase HrpA	Related to ATP-dependent helicase HrpA	HrpA-like helicases	Putative ATP-dependent helicase	putative ATP-dependent helicase HrpA	ATP-dependent helicase hrpA	ATP-dependent helicase HrpA	Putative ATP-dependent helicase	Putative ATP-dependent helicase	ATP-dependent helicase HrpA	ATP-dependent helicase	PMID: 7899078 best DB hits: BLAST: pir:H83232; probable ATP-dependent helicase PA3297 [imported] -; E=0.0 pir:F82207; ATP-dependent helicase HrpA VC1382 [imported] - Vibrio; E=0.0 swissprot:P43329; HRPA_ECOLI ATP-DEPENDENT HELICASE HRPA -----; E=0.0 COG: PA3297; COG1643 HrpA-like helicases; E=0.0 PFAM: PF00005; ABC transporter; E=0.016 PF00270; DEAD/DEAH box helicase; E=0.66 PF00271; Helicase conserved C-terminal; E=1.3e-12 ATP-dependent helicase hrpA	ATP-dependent helicase HrpA	Putative ATP-dependent helicase	Putative ATP-dependent helicase	ATP-dependent helicase HrpA	ATP-dependent helicase HrpA	ATP-dependent helicase HrpA	Putative ATP-dependent helicase	Helicase, ATP-dependent	
ECOLI01368	Protein ydcF	Protein ydcF	Putative uncharacterized protein ydcF	Putative uncharacterized protein lp_3432	putative inner membrane protein	Putative inner membrane protein	contains a DUF218 domain DUF218 domain protein	Code: S; COG: COG1434 conserved hypothetical protein	Code: S; COG: COG1434 conserved hypothetical protein	Protein YdcF	Conserved hypothetical protein	conserved hypothetical protein identified by similarity to PIR:D90881; match to protein family HMM PF02698	Putative uncharacterized protein ydcF	hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydcF	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01369	Lactaldehyde dehydrogenase	Aldehyde dehydrogenase A	Aldehyde dehydrogenase, NAD-linked	CDS_ID OB0492; NAD aldehyde dehydrogenase	Residues 1 to 479 of 479 are 99 pct identical to residues 1 to 479 of a 479 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287746.1 aldehyde dehydrogenase, NAD-linked	Code: C; COG: COG1012 aldehyde dehydrogenase, NAD-linked	Aldehyde dehydrogenase A	Aldehyde dehydrogenase A	aldehyde dehydrogenase, NAD-linked Code: C; COG: COG1012	aldehyde dehydrogenase A	Aldehyde dehydrogenase A	Aldehyde dehydrogenase	Lactaldehyde dehydrogenase	Aldehyde dehydrogenase	Aldehyde dehydrogenase A, NAD-linked	Aldehyde dehydrogenase A	Aldehyde dehydrogenase A, NAD-linked	Aldehyde dehydrogenase A	Aldehyde Dehydrogenase_	Aldehyde dehydrogenase A	Putative uncharacterized protein	Putative uncharacterized protein	Aldehyde dehydrogenase A	Aldehyde dehydrogenase A	Aldehyde dehydrogenase A	Aldehyde dehydrogenase	Aldehyde dehydrogenase A, NAD-linked	pseudo	Aldehyde dehydrogenase A, NAD-linked	


ECOLI01371	Cytochrome b561	Putative cytochrome	Cytochrome b561	Cytochrome B561	Cytochrome b(561)	Residues 1 to 188 of 188 are 100 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli O157:H7 ref: NP_310050.1 cytochrome b(561)	Probable cytochrome b561	identified by similarity to SP:P16670; match to protein family HMM PF01292 cytochrome b562	Probable cytochrome b(561)	Cytochrome b561	Cytochrome b(561)	Code: C; COG: COG3038 cytochrome b(561)	Code: C; COG: COG3038 cytochrome b(561)	Code: C; COG: COG3038 cytochrome b(561)	putative transmembrane cytochrome b562 similarity:fasta; with=UniProt:C562_RHOSH (EMBL:RSCYTB5); Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides).; Cytochrome b562 (Cytochrome b-562).; length=157; id 33.742; 163 aa overlap; query 2-163; subject 2-153 similarity:fasta; with=UniProt:Q8UC67_AGRT5 (EMBL:AE009210); Agrobacterium tumefaciens (strain C58/ATCC 33970).; Hypothetical protein Atu2631.; length=166; id 61.446; 166 aa overlap; query 1-166; subject 1-166	putative cytochrome b561 protein similar to AGR_C_4771p [Agrobacterium tumefaciens] Similar to swissprot:Q8UC67 Putative location:bacterial inner membrane Psort-Score: 0.3972; go_component: membrane [goid 0016020]; go_function: oxidoreductase activity [goid 0016491]; go_process: electron transport [goid 0006118]	Probable cytochrome b561	Cytochrome B561	Cytochrome b561	Cytochrome B561	cytochrome b(561) Code: C; COG: COG3038	Cytochrome B561	cytochrome b561	Cytochrome B561	Cytochrome B561	Putative uncharacterized protein cybB	Putative uncharacterized protein	Nickel-dependent hydrogenase, b-type cytochrome subunit	Cytochrome B561	
ECOLI01372	Uncharacterized protein ydcA	Putative uncharacterized protein ydcA	Residues 1 to 57 of 57 are 100 pct identical to residues 1 to 57 of a 57 aa protein from Escherichia coli K12 ref: NP_415936.1 orf, conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydcA	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydcA	Putative uncharacterized protein ydcA	Putative uncharacterized protein ydcA	Putative uncharacterized protein ydcA	Predicted protein	Putative uncharacterized protein ydcA	YdcA protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI01374	Regulatory protein mokB	conserved hypothetical protein	orf conserved hypothetical protein	Regulatory peptide	Putative uncharacterized protein	Regulatory peptide	Regulatory peptide	Regulatory peptide	MokB protein	Regulatory peptide	Regulatory peptide	regulatory peptide MokB	Putative uncharacterized protein	
ECOLI01374	Regulatory protein mokB	conserved hypothetical protein	orf conserved hypothetical protein	Regulatory peptide	Putative uncharacterized protein	Regulatory peptide	Regulatory peptide	Regulatory peptide	MokB protein	Regulatory peptide	Regulatory peptide	regulatory peptide MokB	Putative uncharacterized protein	
ECOLI01375	Methyl-accepting chemotaxis protein III	Methyl-accepting chemotaxis protein 2	putative methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein III, ribose sensor receptor	Residues 1 to 546 of 546 are 99 pct identical to residues 1 to 546 of a 546 aa protein from Escherichia coli K12 ref: NP_415938.1 methyl-accepting chemotaxis protein III, ribose sensor receptor	IPR003660: Histidine kinase, HAMP region; IPR004089: Bacterial chemotaxis sensory transducer; IPR004090: Methyl-accepting chemotaxis protein;IPR004091: Aspartate chemoreceptor protein methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor	Methyl-accepting chemotaxis protein III	identified by match to protein family HMM PF00015; match to protein family HMM PF00672 methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015; match to protein family HMM PF00672 methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015; match to protein family HMM PF00672 methyl-accepting chemotaxis protein	ribose sensor receptor; Code: NT; COG: COG0840 methyl-accepting chemotaxis protein III	methyl-accepting chemotaxis sensory transducer	Methyl-accepting chemotaxis protein COG0840	ribose sensor receptor; Code: NT; COG: COG0840 methyl-accepting chemotaxis protein III	pseudo	Hypothetical protein precursor	Putative methyl-accepting chemotaxis sensory transducer	putative methyl-accepting chemotaxis sensory transducer	Methyl-accepting chemotaxis sensory transducer precursor	Methyl-accepting chemotaxis protein non-cytoplasmic protein	Methyl-accepting chemotaxis protein non-cytoplasmic protein	Chemotaxis sensory transducer precursor	Hypothetical protein precursor	methyl-accepting chemotaxis sensory transducer PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer KEGG: rpc:RPC_3378 methyl-accepting chemotaxis sensory transducer	
ECOLI01376	Uncharacterized HTH-type transcriptional regulator ydcI	HTH-type transcriptional regulator pcaQ	Hypothetical transcriptional regulator ydcI	Product confidence : putative Gene name confidence : putative putative transcriptional activator of the pca operon, LysR family protein	Pca operon transcriptional activator PcaQ	Putative transcriptional regulator LYSR-type	regulatory protein	Transcriptional regulator, LysR family	Residues 1 to 354 of 354 are 98 pct identical to residues 1 to 354 of a 354 aa protein from Escherichia coli K12 ref: NP_415939.1 putative transcriptional regulator LYSR-type	Probable transcriptional regulatory dna-binding transcription regulator protein	Transcriptional regulator (Activator) protein of the pca operon	IPR000847: Bacterial regulatory protein LysR, HTH motif putative transcriptional regulators, LysR family	Transcriptional regulator PcaQ	Transcriptional regulator, LysR family	Putative LysR family transcriptional regulator	identified by similarity to SP:P52668; match to protein family HMM PF00126; match to protein family HMM PF03466; match to protein family HMM TIGR02424 pca operon transcription factor PcaQ	identified by similarity to SP:P52668; match to protein family HMM PF00126; match to protein family HMM PF03466; match to protein family HMM TIGR02424 pca operon transcriptional activator PcaQ	regulatory protein, LysR:LysR, substrate-binding	regulatory protein, LysR:LysR, substrate-binding	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	transcriptional regulator, LysR family	transcriptional regulator, LysR family	transcriptional regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	putative LysR family transcriptional regulator PcaQ similarity:fasta; SWALL:PCAQ_AGRT5 (SWALL:P52668); Agrobacterium tumefaciens; hth-type transcriptional regulator PcaQ; pcaQ; length 311 aa; 303 aa overlap; query 1-303 aa; subject 1-303 aa similarity:fasta; SWALL:Q92TL9 (EMBL:AL603647); Rhizobium meliloti; putative transcriptional activator of the pca operon, lysr family protein; pcaQ; length 313 aa; 304 aa overlap; query 1-304 aa; subject 1-304 aa	transcriptional regulator, LysR family TIGRFAM: Pca transcription factor PcaQ: (6e-133) PFAM: regulatory protein, LysR: (5.9e-20) LysR, substrate-binding: (1.1e-35) KEGG: sil:SPOA0047 pca operon transcriptional activator PcaQ, ev=4e-98, 60% identity	transcriptional regulator (activator) protein of the pca operon , LysR family Similar to pcaQ (SMb20580) [Sinorhizobium meliloti] Similar to swissprot:Q92TL9 Putative location:bacterial cytoplasm Psort-Score: 0.0853; go_component: extrachromosomal DNA [goid 0046821]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	Putative transcriptional regulators, LysR family	transcriptional regulator, LysR family	
ECOLI01377	Uncharacterized protein ydcJ	pseudo	Hypothetical protein ydcJ	similar to GP:15076314, and GP:15076314; identified by sequence similarity; putative conserved hypothetical protein	conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	similar to AJ414148-36|CAC90226.1| percent identity: 34 in 442 aa conserved hypothetical protein	Residues 1 to 447 of 447 are 99 pct identical to residues 1 to 447 of a 447 aa protein from Escherichia coli K12 ref: NP_415940.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein Rv3292/MT3391	Mb3320, -, len: 415 aa. Equivalent to Rv3292, len: 415 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 415 aa overlap). Conserved hypothetical protein, similar to P76097|YDCJ_ECOLI|B1423 HYPOTHETICAL 51.0 KDA PROTEIN from Escherichia coli strain K12 (447 aa), FASTA scores: opt: 747, E(): 5.6e-39, (38.55% identity in 449 aa overlap); BAB35451|ECS2028 HYPOTHETICAL 51.0 KDA PROTEIN from Escherichia coli strain O157:H7 (447 aa), FASTA scores: opt: 744, E(): 8.6e-39, (38.3% identity in 449 aa overlap); AAG56352|Z2297 PROTEIN from Escherichia coli O157:H7 EDL933 (212 aa), FASTA scores: opt: 454, E(): 4.6e-21, (41.75% identity in 206 aa overlap); and similar in part with Q49664|B1308_C1_136 from Mycobacterium leprae (71 aa), FASTA scores: opt: 305, E(): 3.2e-12, (70.0% identity in 70 aa overlap). CONSERVED HYPOTHETICAL PROTEIN	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR000276: Rhodopsin-like GPCR superfamily putative cytoplasmic protein	similar to BRA0907, conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	identified by match to protein family HMM PF07063 Protein of unknown function (DUF1338) family	identified by match to protein family HMM PF07063 conserved hypothetical protein	Protein of unknown function DUF1338	Code: S; COG: COG5383 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG5383 conserved hypothetical protein	
ECOLI01378	Glucans biosynthesis protein D	Glucans biosynthesis protein D	Glucans biosynthesis protein D	Glucans biosynthesis protein D precursor	Probable glucans biosynthesis protein D precursor	Glucans biosynthesis protein D	Glucans biosynthesis protein D	Residues 1 to 551 of 551 are 99 pct identical to residues 1 to 551 of a 551 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287736.1 putative glycoprotein	Glucans biosynthesis protein D 1	Glucans biosynthesis protein D	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark periplasmic glucan biosynthesis protein	paral putative periplasmic glucans biosynthesis protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Glucans biosynthesis protein D	Glucans biosynthesis protein D	periplasmic glucan biosynthesis protein	identified by similarity to SP:P33136; match to protein family HMM PF04349 periplasmic glucan biosynthesis protein, putative	identified by match to protein family HMM PF04349 periplasmic glucan biosynthesis protein, putative	Twin-arginine translocation pathway signal	Code: P; COG: COG3131 putative glycoprotein	Code: P; COG: COG3131 putative glycoprotein	periplasmic glucan biosynthesis protein, MdoG	Twin-arginine translocation pathway signal	Code: P; COG: COG3131 putative glycoprotein	periplasmic glucan biosynthesis protein	Protein YdcG	Periplasmic glucan biosynthesis protein, MdoG	periplasmic glucan biosynthesis protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Glucans biosynthesis protein D	
ECOLI01379	Uncharacterized protein ydcH	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein ydcH	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydcH	Residues 22 to 76 of 76 are 100 pct identical to residues 1 to 55 of a 55 aa protein from Escherichia coli K12 ref: NP_415943.1 orf, conserved hypothetical protein	Putative uncharacterized protein	identified by similarity to OMNI:NTL01CJ00422; match to protein family HMM PF04325 conserved hypothetical protein	Putative uncharacterized protein	Putative	Hypothetical protein	Protein of unknown function DUF465	Best Blastp Hit: gb|AAF41455.1| (AE002456) conserved hypothetical protein [Neisseria meningitidis MC58] >gi|7379938|emb|CAB84513.1| (AL162755) hypothetical protein NMA1258 [Neisseria meningitidis] conserved hypothetical protein	Code: S; COG: COG2841 conserved hypothetical protein	Code: S; COG: COG2841 conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Code: S; COG: COG2841; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	hypothetical protein	Hypothetical protein	Putative uncharacterized protein ydcH	conserved domain protein identified by match to protein family HMM PF04325	Hypothetical protein	conserved hypothetical protein similar to HP1242 Function unclear	
ECOLI01381	Uncharacterized acetyltransferase ydcK	Hypothetical protein ydcK	Putative uncharacterized protein	Residues 1 to 326 of 326 are 98 pct identical to residues 1 to 326 of a 326 aa protein from Escherichia coli K12 ref: NP_415945.1 orf, conserved hypothetical protein	similar to Salmonella typhi CT18 putative transferase putative transferase	Putative nucleoside-diphosphate-sugar pyrophosphorylases	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydcK	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative nucleoside-diphosphate-sugar pyrophosphorylase	Putative LpxA-like enzyme	Putative uncharacterized protein	Predicted enzyme	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative transferase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative transferase	Putative uncharacterized protein	
ECOLI01380	Ribosomal-protein-serine acetyltransferase	N-acetyltransferase	Acetyltransferase	Acetyltransferase related protein	Acetyltransferase	Putative uncharacterized protein	Acetyltransferase	Ribosomal protein N-acetyltransferase, putative	Ribosomal-protein-serine acetyltransferase	Putative acetyltransferase	Ribosomal-protein-serine acetyltransferase	Ribosomal-protein-serine acetyltransferase	hypothetical acetyltransferase	Ribosomal-protein-serine acetyltransferase	identified by match to protein family HMM PF00583 ribosomal-protein-serine acetyltransferase, putative	Ribosomal-protein-serine acetyltransferase, putative	Probable acetyltransferase	Putative ribosomal-protein-serine N- acetyltransferase	SC10F4.25, possible acetyltransferase, len: 183 aa; similar to TR:Q9Z576 (EMBL:AL035569) Streptomyces coelicolor putative acetyltransferase SC8D9.15, 194 aa; fasta scores: opt: 640 z-score: 820.9 E(): 0; 51.4% identity in 181 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf, Acetyltransferase (GNAT) family putative acetyltransferase	Acetyltransferase	Residues 6 to 183 of 183 are 98 pct identical to residues 1 to 178 of a 179 aa protein from Escherichia coli K12 ref: NP_415944.1 acetylation of N-terminal serine of 30S ribosomal subunit protein L7; acetyl transferase	Similar to ribosomal-protein-serine N- acetyltransferase	Ribosomal-protein-serine N-acetyltransferase	ribosomal-protein-serine acetyltransferase	acetyl transferase, modifies N-terminal serine of 50S ribosomal subunit protein L7/L12	similar to Salmonella typhi CT18 ribosomal-protein-serine acetyltransferase ribosomal-protein-serine acetyltransferase	hypothetical protein, similar to ribosomal-protein-serine N-acetyltransferase	Ortholog of S. aureus MRSA252 (BX571856) SAR0339 putative acetyltransferase	hypothetical protein, similar to ribosomal-protein-serine N-acetyltransferase	
ECOLI01382	Tellurite resistance protein tehA	Putative malic acid transport protein	C4-dicarboxylate transporter	Tellurite resistance protein tehA homolog	Mae1-like C4-dicarboxylate transporter, putative	Putative tellurite resistance protein	TehA	Tellurite resistance protein	Tellurite resistance protein TehA	conserved hypothetical protein	Tellurite resistance protein tehA	Putative uncharacterized protein	C4-dicarboxylate transporter/malic acid transport protein	Putative uncharacterized protein VP2377	Tellurite resistance	Tellurite resistance protein	Residues 37 to 366 of 366 are 99 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli K12 ref: NP_415946.1 tellurite resistance	IPR004695: C4-dicarboxylate transporter/malic acid transport protein TDT family, K+-tellurite ethidium and proflavin transport protein	similar to Salmonella typhi CT18 tellurite resistance protein TehA tellurite resistance protein TehA	hypothetical membrane-spanning protein	Similar to: HI0511, TEHA_HAEIN tellurite resistance protein	Tellurite resistance protein and related permeases TehA protein	K+-tellurite ethidium and proflavin transport protein	putative malic acid transport protein	identified by match to protein family HMM PF03595 C4-dicarboxylate transporter/malic acid transport protein	C4-dicarboxylate transporter/malic acid transport protein	C4-dicarboxylate transporter/malic acid transport protein	Code: P; COG: COG1275 tellurite resistance	Citation: Walter EG, Weiner JH, Taylor DE. Gene.  1991 101(1):1-7 (from plasmids) MEDLINE 94222856 (ortholog from E. coli). COG1275, TehA, Tellurite resistance protein and related permeases. Tellurite resistance protein TehA is part of a tellurite-reducing operon tehA and tehB. Possible tellurite resistance protein	
ECOLI01383	Tellurite resistance protein tehB	Tellurite resistance protein tehB homolog	Putative tellurite resistance protein	TehB	Tellurite resistance protein TehB	Tellurite resistance protein tehB	Tellurite resistance protein TehB	Putative tellurite resistance protein	Putative tellurite resistance protein	Tellurite resistance	Residues 1 to 197 of 197 are 98 pct identical to residues 1 to 197 of a 197 aa protein from Escherichia coli K12 ref: NP_415947.1 tellurite resistance	Putative tellurite resistance protein	Tellurite resistance protein TehB	Similar to tellurite resistance protein TehB hypothetical protein	conserved gene tellurite resistance protein	Similar to tellurite resistance protein TehB hypothetical protein	Tellurite resistance protein	tellurite resistance protein TehB	IPR000051: SAM (and some other nucleotide) binding motif paral putative methyltransferase; tellurite resistance	similar to Salmonella typhi CT18 tellurite resistance protein TehB tellurite resistance protein TehB	Putative uncharacterized protein gbs1612	identified by match to TIGR protein family HMM TIGR00477 tellurite resistance protein TehB	Putative tellurite resistance protein	Hypothetical protein	Tellurite resistance	Similar to: HI1275, TEHB_HAEIN tellurite resistance protein	SAM-dependent methyltransferases SmtA protein	tellurite resistance protein TehB	Putative methyltransferase	
ECOLI01384	Uncharacterized lipoprotein ydcL	hypothetical protein	Hypothetical lipoprotein ydcL	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Uncharacterized lipoprotein ydcL	Residues 1 to 148 of 165 are 96 pct identical to residues 1 to 152 of a 222 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287729.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative uncharacterized protein	Putative outer membrane lipoprotein	lipoprotein, putative	Hypothetical lipoprotein YdcL	Putative uncharacterized protein	Putative exported protein precursor	conserved hypothetical protein	conserved hypothetical protein Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative outer membrane lipoprotein precursor	Putative uncharacterized protein ydcL	Putative uncharacterized protein	Putative lipoprotein	Lipoprotein, putative	Putative uncharacterized protein precursor	Predicted lipoprotein	Putative lipoprotein	
ECOLI01385	pseudo	Vng0043h	Putative IS200/IS605 family ISFsp4-like transposase	Transposase	Putative IS element transposase	Hypothetical transposase	Putative Transposase	transposase	Transposase	IS200 insertion sequence from SARA17	Putative transposase	IPR002686: transposase IS200-like transposase	similar to Salmonella typhi CT18 putative IS element transposase putative IS element transposase	transposition helper protein	IS200-type transposase	Transposase IS200-like	Transposase IS200-like	Code: L; COG: COG1943 putative transposase TnA	IS200-type transposase	hypothetical protein similarity to COG1943 Predicted transposase	transposase IS200-family protein PFAM: transposase IS200-family protein KEGG: ecc:c3803 putative transposase	Transposase IS200-family protein	ISHa1942 transposase A homolog IS606-like IS element Specificity unclear	transposase IS200-family protein PFAM: transposase IS200-family protein KEGG: sec:SCV07 transposase	Transposase, IS200 family	Transposase IS200-family protein	transposase IS200-family protein PFAM: transposase IS200-family protein KEGG: sma:SAV821 putative IS200-like transposase	pseudo	IS200 transposase orfA	
ECOLI01385	pseudo	Vng0043h	Putative IS200/IS605 family ISFsp4-like transposase	Transposase	Putative IS element transposase	Hypothetical transposase	Putative Transposase	transposase	Transposase	IS200 insertion sequence from SARA17	Putative transposase	IPR002686: transposase IS200-like transposase	similar to Salmonella typhi CT18 putative IS element transposase putative IS element transposase	transposition helper protein	IS200-type transposase	Transposase IS200-like	Transposase IS200-like	Code: L; COG: COG1943 putative transposase TnA	IS200-type transposase	hypothetical protein similarity to COG1943 Predicted transposase	transposase IS200-family protein PFAM: transposase IS200-family protein KEGG: ecc:c3803 putative transposase	Transposase IS200-family protein	ISHa1942 transposase A homolog IS606-like IS element Specificity unclear	transposase IS200-family protein PFAM: transposase IS200-family protein KEGG: sec:SCV07 transposase	Transposase, IS200 family	Transposase IS200-family protein	transposase IS200-family protein PFAM: transposase IS200-family protein KEGG: sma:SAV821 putative IS200-like transposase	pseudo	IS200 transposase orfA	
ECOLI01386	Uncharacterized protein ydcM	Putative uncharacterized protein PF1918	Probable transposase	Putative IS element transposase	Hypothetical protein ydcM	Transposase	IS1535, transposase	Mb0946, -, len: 550 aa. Equivalent to Rv0922, len: 550 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 550 aa overlap). Possible transposase for IS1535, similar to many e.g.  YX16_MYCTU|Q10809|MTCY274.16c from Mycobacterium tuberculosis (460 aa), FASTA scores: opt 939, E(): 0, (40.6% identity in 465 aa overlap); etc. PUTATIVE TRANSPOSASE	transposase, is605-tnpb	similar to Salmonella typhi CT18 putative IS element transposase putative IS element transposase	transposase	Transposase	Code: L; COG: COG0675 putative virulence protein	ISSoc9, transposase identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766	Code: L; COG: COG0675 putative virulence protein	IS1341-type transposase	transposase, IS605 OrfB family TIGRFAM: transposase, IS605 OrfB family PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB KEGG: spt:SPA0100 putative IS element transposase	Transposase, IS605 OrfB family	hypothetical protein similar to transposase Mapped to H37Rv Rv0922	Putative transposase	Transposase	Transposase, IS605 family	IS1535 transposase	Transposase, IS605 OrfB family	Predicted transposase	Transposase, IS605 orfB family	Transposase, IS605 OrfB family	IS605 family transposase orfB	Transposase, IS605 OrfB family	
ECOLI01387	Inner membrane protein ydcO	Probable transporter	Putative benzoate membrane transport protein	Putative transport related membrane protein	Benzoate membrane transport protein	Hypothetical protein ydcO	identified by match to PFAM protein family HMM PF03806 benzoate transport protein, putative	Benzoate transport protein	Putative transport protein	Putative transport protein	Putative benzoate transport protein	Putative transport protein	Benzoate transport protein	BENZOATE MEMBRANE TRANSPORT PROTEIN	Putative membrane transport protein	similar to benzoate transport protein	Similar to benzoate membrane transport protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark benzoate transporter	IPR000005: Helix-turn-helix, AraC type; IPR004711: Benzoate membrane transport protein putative benzoate membrane transport protein	Benzoate transporter	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative benzoate membrane transport protein	Benzoate transport protein	Uncharacterized protein involved in benzoate metabolism	Putative benzoate membrane transport protein	benzoate transporter	identified by match to protein family HMM PF03594; match to protein family HMM TIGR00843 benzoate transporter	identified by match to protein family HMM PF03594; match to protein family HMM TIGR00843 benzoate transport protein	Benzoate membrane transport protein	Benzoate membrane transport protein	
ECOLI01388	Uncharacterized HTH-type transcriptional regulator ydcN	Putative DNA-binding protein	Putative DNA binding protein	Hypothetical protein ydcN	Transcriptional regulator, HTH_3 family	Putative DNA-binding protein	Transcriptional regulator, putative	DNA-binding protein	Putative uncharacterized protein ydcN	Possible transcriptional regulator, XRE family, CUPIN domain	BH2909 protein	Transcriptional regulator	CRO/Cl type-3 family transcription regulator	identified by match to protein family HMM PF01381 DNA-binding protein, putative	Putative uncharacterized protein	InterProMatches:IPR011051 putative transcriptional regulator	putative oxidoreductase/putative repressor	Putative oxidoreductase	identified by match to protein family HMM PF01381; match to protein family HMM PF07883 DNA-binding protein	transcriptional regulator, XRE family	Code: K; COG: COG1396 conserved hypothetical protein	transcriptional regulator, XRE family	transcriptional regulator, XRE family	Code: K; COG: COG1396; orf conserved hypothetical protein	Transcriptional regulator, XRE family	Transcriptional Regulator, XRE family with Cupin sensor domain	transcriptional regulator, XRE family PFAM: helix-turn-helix motif: (7.3e-16) Cupin 2, conserved barrel: (6e-13) KEGG: sil:SPO3313 DNA-binding protein, putative, ev=1e-67, 68% identity	DNA-binding protein identified by match to protein family HMM PF01381; match to protein family HMM PF07883	Putative uncharacterized protein	
ECOLI01389	Uncharacterized protease ydcP	Putative collagenase	Putative peptidase	Probable proteinase	Putative collagenase	Putative protease ydcP	Peptidase, U32 family	Peptidase, U32 family	Protease	probable proteinase	Putative collagenase	Collagenase and related proteases	Probable collagenase	IPR001539: Peptidase U32 putative collagenase	similar to Salmonella typhi CT18 putative peptidase putative peptidase	Similar to Porphyromonas gingivalis peptidase PrtQ protein SWALL:Q9ZNF7 (EMBL:AB016085) (635 aa) fasta scores: E(): 2.4e-72, 50.4% id in 621 aa, and to Bacteroides thetaiotaomicron putative collagenase BT2412 SWALL:AAO77519 (EMBL:AE016935) (609 aa) fasta scores: E(): 8.8e-213, 84.84% id in 607 aa, and to Escherichia coli putative protease YdcP precursor or B1435 SWALL:YDCP_ECOLI (SWALL:P76104) (653 aa) fasta scores: E(): 3.5e-82, 46.69% id in 621 aa putative protease	Peptidase, U32 family	Putative collagenase	identified by match to protein family HMM PF01136 peptidase, U32 family	identified by match to protein family HMM PF01136 peptidase, U32 family	Peptidase U32	Peptidase U32	Code: O; COG: COG0826 putative collagenase	probable collagenase	predicted peptidase pfam01136	Peptidase U32	Code: O; COG: COG0826 putative collagenase	Putative peptidase	Peptidase U32	
ECOLI01390	Uncharacterized protein yncJ	Hypothetical protein yncJ	Uncharacterized protein yncJ	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative periplasmic protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yncJ	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yncJ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yncJ	Putative uncharacterized protein	Putative uncharacterized protein yncJ	
ECOLI01391	UPF0395 protein yncN	conserved hypothetical protein	conserved hypothetical protein	YcfA family protein	Predicted protein	YcfA family protein	Putative uncharacterized protein	Putative uncharacterized protein yncN	Putative uncharacterized protein PflO1_0304	YncN protein	Predicted protein	Predicted protein	YcfA family protein	
ECOLI01392	Uncharacterized HTH-type transcriptional regulator ydcQ	Putative uncharacterized protein	Similar to unknown protein YdcQ of Escherichia coli	Putative uncharacterized protein	conserved hypothetical protein	Code: S; COG: COG1598 conserved hypothetical protein	protein of unknown function UPF0150	Code: S; COG: COG1598; orf conserved hypothetical protein	Protein of unknown function UPF0150	Hypothetical protein	protein of unknown function UPF0150 PFAM: protein of unknown function UPF0150 KEGG: rpb:RPB_1422 protein of unknown function UPF0150	Hypothetical protein	protein of unknown function UPF0150 PFAM: protein of unknown function UPF0150 KEGG: rpb:RPB_1422 protein of unknown function UPF0150	Hypothetical protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	DNA-binding protein	Predicted DNA-binding transcriptional regulator	Putative uncharacterized protein	Putative uncharacterized protein	Transcriptional regulator, XRE family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01393	Uncharacterized HTH-type transcriptional regulator ydcR	Putative uncharacterized protein	Putative regulatory protein	Putative GntR-family transcriptional regulator	Hypothetical protein ydcR	Transcriptional regulator, GntR family	Putative aminotransferase	Putative bifunctional protein, includes	Putative aminotransferase	Putative transcriptional regulator; also putative ATP-binding component of a transport system	Multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system	Putative GntR-family regulatory protein	Similar to unknown protein YdcR of Escherichia coli	IPR000524: Bacterial regulatory protein, GntR family; IPR004839: Aminotransferase, class I and II putative regulatory protein, gntR family	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	Putative GntR-family regulatory protein	Putative gntR family regulatory protein	identified by match to protein family HMM PF00155; match to protein family HMM PF00392 aminotransferase/transcriptional regulator, GntR family	identified by match to protein family HMM PF00155; match to protein family HMM PF00392 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein	identified by match to protein family HMM PF00155; match to protein family HMM PF00392 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein	regulatory protein GntR, HTH:Aminotransferase, class I and II	regulatory protein GntR, HTH:Aminotransferase, class I and II	regulatory protein, GntR:Aminotransferase, class I and II	Code: KE; COG: COG1167 multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system	transcriptional regulatory protein GntR	regulatory protein GntR, HTH	transcriptional regulator, GntR family with aminotransferase activity	Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs COG1167	multi modular; also putative ATP-binding component of a transport system; Code: KE; COG: COG1167 putative transcriptional regulator	
ECOLI01394	Putative ABC transporter periplasmic-binding protein ydcS	Putative ABC transporter Periplasmic binding protein ydcS	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ABC TRANSPORTER PROTEIN	Putative transport protein	ABC transporter, binding protein	Spermidine/putrescine ABC transporter	Polyamine ABC transporter, periplasmic polyamine- binding protein	Code: E; COG: COG0687 putative transport protein	ABC transport protein	extracellular solute-binding protein, family 1	polyamine/opine/phosphonate uptake ABC transporter family,periplasmic substrate-binding protein identified by match to protein family HMM PF01547	extracellular solute-binding protein, family 1	Code: E; COG: COG0687 putative transport protein	putative solute-binding component of ABC transporter similarity:fasta; with=UniProt:Q92NE3_RHIME (EMBL:SME591790); Rhizobium meliloti (Sinorhizobium meliloti).; PUTATIVE ABC TRANSPORTER PROTEIN. PUTATIVE ABC TRANSPORTER PROTEIN.; length=386; id 82.642; 386 aa overlap; query 1-386; subject 1-386	ABC spermidine/putrescine transporter, periplasmic ligand binding protein	putative spermidine/putrescine ABC transporter, substrate-binding protein similar to SMc01652 [Sinorhizobium meliloti] Similar to swissprot:Q92NE3 Putative location:bacterial periplasmic space Psort-Score: 0.9256; go_component: periplasmic space (sensu Gram-negative Bacteria) [goid 0030288]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810]	Putative extracellular solute-binding protein YdcS	Putative ABC transporter periplasmic binding protein ydcS	Extracellular solute-binding protein, family 1 precursor	Extracellular solute-binding protein, family 1 precursor	ABC transporter, periplasmic substrate-binding protein identified by match to protein family HMM PF01547	extracellular solute-binding protein, family 1 PFAM: extracellular solute-binding protein, family 1 KEGG: pca:Pcar_0492 spermidine/putrescine-binding periplasmic protein-like	putative ABC transporter, periplasmic polyamine-binding protein Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	ABC transporter binding protein	putative ABC transporter periplasmic binding protein YdcS precursor	Extracellular solute-binding protein family 1 precursor	Extracellular solute-binding protein, family 1 precursor	Extracellular solute-binding protein, family 1 precursor	Extracellular solute-binding protein family 1 precursor	
ECOLI01395	Uncharacterized ABC transporter ATP-binding protein ydcT	Putative polyamine ABC transporter ATP-binding protein	Spermidine/putrescine ABC transporter, ATP- binding protein	Spermidine/putrescine import ATP-binding protein PotA	Hypothetical ABC transporter ATP-binding protein ydcT	Putative ABC transporter, ATP-binding protein	Spermidine/putrescine import ATP-binding protein potA	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN	ABC transporter ATP-binding protein	Spermidine/putrescine import ATP-binding protein potA	Putative ATP-binding component of a transport system	Spermidine/putrescine import ATP-binding protein potA	ABC transporter ATP-binding protein	Similar to spermidine/putrescine transport system ATP-binding protein PotA hypothetical protein	Similar to spermidine/putrescine transport system ATP-binding protein PotA hypothetical protein	Spermidine/putrescine import ATP-binding protein potA	Spermidine/putrescine ABC transporter	PotA spermidine and putrescine ABC transporter ATP-binding protein	Spermidine/putrescine ABC transporter, ATP- binding protein	Polyamine ABC transporter, ATP-binding protein	Code: E; COG: COG3842 putative ATP-binding component of a transport system	Spermidine/putrescine ABC transporter, ATP-binding subunit	Spermidine/putrescine ABC transporter ATP-binding subunit	ABC transporter, ATP-binding protein	polyamine ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM TIGR01187	spermidine/putrescine ABC transporter ATP-binding subunit	Spermidine/putrescine ABC transporter ATP-binding subunit	Spermidine/putrescine transport ATP-binding protein potA COG3842 [E] ABC-type spermidine/putrescine transport systems, ATPase components	Code: E; COG: COG3842 putative ATP-binding component of a transport system	
ECOLI01396	Inner membrane ABC transporter permease protein ydcU	Putative polyamine ABC transporter permease protein	ABC transporter, membrane spanning protein	Hypothetical ABC transporter permease protein ydcU	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN	Putative transport system permease protein	ABC transporter permease protein	Spermidine/putrescine ABC transporter	Polyamine ABC transporter, permease protein	identified by match to protein family HMM PF00528 ABC transporter, permease protein	Binding-protein-dependent transport systems inner membrane component	polyamine/opine/phosphonate uptake ABC transporter (POPT) family, permease protein identified by match to protein family HMM PF00528	Binding-protein-dependent transport systems inner membrane component	putative transmembrane component of ABC transporter similarity:fasta; with=UniProt:Q98BX8_RHILO (EMBL:BA000012); Rhizobium loti (Mesorhizobium loti).; ABC transporter permease protein.; length=316; id 80.064; 311 aa overlap; query 11-321; subject 6-316	Binding-protein-dependent transport system inner membrane component	Hypothetical ABC transporter permease protein ydcU	Binding-protein-dependent transport systems inner membrane component precursor	Binding-protein-dependent transport systems inner membrane component	ABC transporter, permease protein identified by match to protein family HMM PF00528	putative ABC transporter, permease protein Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	ABC transporter permease protein	hypothetical ABC transporter permease protein YdcU	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	Putative ABC transporter permease protein	ABC transporter, permease protein	Binding-protein-dependent transport systems inner membrane component	
ECOLI01397	Inner membrane ABC transporter permease protein ydcV	Hypothetical ABC transporter permease protein ydcV	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN	Putative transport system permease protein	ABC transporter, permease protein	Residues 1 to 264 of 264 are 100 pct identical to residues 1 to 264 of a 264 aa protein from Escherichia coli K12 ref: NP_415960.1 putative transport system permease protein	Spermidine/putrescine ABC transporter	Polyamine ABC transporter, permease protein	Code: E; COG: COG1177 putative transport system permease protein	binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	polyamine/opine/phosphonate uptake ABC transporter (POPT) family, permease protein identified by match to protein family HMM PF00528	Binding-protein-dependent transport systems inner membrane component	putative transmembrane component of ABC transporter similarity:fasta; with=UniProt:Q92NE0_RHIME (EMBL:SME591790); Rhizobium meliloti (Sinorhizobium meliloti).; PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN.; length=271; id 88.930; 271 aa overlap; query 1-270; subject 1-271	putative ABC transport system, membrane protein identified by match to protein family HMM PF00528	probable spermidine/putrescine ABC transporter, permease protein similar to SMc01655 [Sinorhizobium meliloti] Similar to swissprot:Q92NE0 Putative location:bacterial inner membrane Psort-Score: 0.5670; go_component: membrane [goid 0016020]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810]	Hypothetical binding-protein-dependent transport system inner membrane component	Putative transport system permease protein	Binding-protein-dependent transport systems inner membrane component	ABC transporter, permease protein identified by match to protein family HMM PF00528	putative ABC transporter, permease protein Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	putative transport system permease protein Code: E; COG: COG1177	ABC transporter permease protein	putative transport system permease protein	2-aminoethylphosphonate ABC transporter, permease protein	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	
ECOLI01398	Gamma-aminobutyraldehyde dehydrogenase	Gamma-aminobutyraldehyde dehydrogenase	Putative aldehyde dehydrogenase	Gamma-aminobutyraldehyde dehydrogenase	Gamma-aminobutyraldehyde dehydrogenase	Aldehyde dehydrogenase family protein	Gamma-aminobutyraldehyde dehydrogenase	SC6A9.10c, probable aldehyde dehydrogenase, len: 479 aa; similar to many e.g. DHAB_BACSU betaine aldehyde dehydrogenase (EC 1.2.1.8) (490 aa), fasta scores; opt: 1131 z-score: 1242.7 E(): 0, 39.2% identity in 472 aa overlap. Contains PS00687 Aldehyde dehydrogenases glutamic acid active site, PS00070 Aldehyde dehydrogenases cysteine active site and Pfam match to entry PF00171 aldedh, Aldehyde dehydrogenases, score 598.80, E-value 3.2e-176 aldehyde dehydrogenase	Residues 1 to 474 of 474 are 99 pct identical to residues 1 to 474 of a 474 aa protein from Escherichia coli K12 ref: NP_415961.1 putative aldehyde dehydrogenase	IPR002086: Aldehyde dehydrogenase putative aldehyde dehydrogenase	similar to Salmonella typhi CT18 putative aldehyde dehydrogenase putative aldehyde dehydrogenase	Betaine aldehyde dehydrogenase, putative	Gamma-aminobutyraldehyde dehydrogenase	Code: C; COG: COG1012 putative aldehyde dehydrogenase	Betaine-aldehyde dehydrogenase	Aldehyde dehydrogenase	Code: C; COG: COG1012 putative aldehyde dehydrogenase	aldehyde dehydrogenase family protein identified by match to protein family HMM PF00171	Gamma-aminobutyraldehyde dehydrogenase	Aldehyde dehydrogenase	Gamma-aminobutyraldehyde dehydrogenase	aldehyde dehydrogenase identified by match to protein family HMM PF00171	aldehyde dehydrogenase family protein identified by match to protein family HMM PF00171	aldehyde dehydrogenase PFAM: aldehyde dehydrogenase KEGG: mmc:Mmcs_2273 aldehyde dehydrogenase	putative aldehyde dehydrogenase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	Hypothetical protein	putative aldehyde dehydrogenase Code: C; COG: COG1012	medium chain aldehyde dehydrogenase	Aldehyde dehydrogenase	
ECOLI01400	Uncharacterized protein ydcX	Putative uncharacterized protein	Residues 1 to 82 of 82 are 95 pct identical to residues 1 to 82 of a 82 aa protein from Escherichia coli K12 ref: NP_415962.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhimurium putative inner membrane protein putative inner membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein ydcX	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative inner membrane protein	
ECOLI01401	Uncharacterized protein ydcY	Hypothetical protein ydcY	Uncharacterized protein ydcY	Residues 1 to 77 of 77 are 100 pct identical to residues 1 to 77 of a 77 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287715.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein ydcY	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydcY	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative cytoplasmic protein	
ECOLI01402	Inner membrane protein ydcZ	Putative membrane protein	Hypothetical protein ydcZ	Putative uncharacterized protein	Residues 1 to 149 of 149 are 98 pct identical to residues 1 to 149 of a 149 aa protein from Escherichia coli K12 ref: NP_415964.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	Code: S; COG: COG3238 conserved hypothetical protein	Code: S; COG: COG3238 conserved hypothetical protein	protein of unknown function DUF606	protein of unknown function DUF606	Code: S; COG: COG3238; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein ydcZ	conserved hypothetical protein	protein of unknown function DUF606 PFAM: protein of unknown function DUF606 KEGG: gme:Gmet_2636 protein of unknown function DUF606	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG3238	Uncharacterized protein conserved in bacteria 4 TMHs	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative transport protein	Putative uncharacterized protein	Putative membrane protein	Predicted inner membrane protein	
ECOLI01403	Uncharacterized N-acetyltransferase yncA	Phosphinothricin acetyltransferase	Acetyltransferase GNAT family	Phosphinothricin acetyltransferase	Phosphinothricin acetyltransferase	Putative acetyltransferase	Putative acetyltransferase	Hypothetical acetyltransferase yncA	similar to GP:15074495; identified by sequence similarity; putative acetyltransferase, GNAT family	Toxin resistance protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ACETYLTRANSFERASE (ANTIBIOTIC RESISTANCE ) PROTEIN	Phosphinothricin N-acetyltransferase, putative	Putative acetyltransferase	N-acetyltransferase	PHOSPHINOTHRICIN N-ACETYLTRANSFERASE	Putative resistance protein	Acetyltransferase, GNAT family	Residues 14 to 207 of 207 are 98 pct identical to residues 19 to 212 of a 212 aa protein from Escherichia coli dbj: BAA15080.1 phosphinothricin acetyltransferase	Similar to N-acetyltransferase	identified by similarity to SP:P21861; match to protein family HMM PF00583 phosphinothricin N-acetyltransferase, putative	Probable resistance protein	putative acyltransferase	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	similar to BR1649, acetyltransferase, GNAT family acetyltransferase, GNAT family	hypothetical protein, similar to N-acetyltransferase	Ortholog of S. aureus MRSA252 (BX571856) SAR2609 acetyltransferase (GNAT) family protein	hypothetical protein, similar to N-acetyltransferase	Similar to Brucella melitensis phosphinothricin N-acetyltransferase BMEI0379 SWALL:Q8YIR4 (EMBL:AE009480) (164 aa) fasta scores: E(): 1.3e-10, 30.48% id in 164 aa, and to Methanosarcina mazei hypothetical protein MM1902 SWALL:Q8PVR0 (EMBL:AE013427) (163 aa) fasta scores: E(): 4.3e-10, 27.43% id in 164 aa putative acetyltransferase	Phosphinothricin N-acetyltransferase, putative	
ECOLI01404	Putative NADP-dependent oxidoreductase yncB	Blr3973 protein	Quinone oxidoreductase	Putative uncharacterized protein	Putative NADP-dependent oxidoreductase	Putative NADP-dependent oxidoreductase	All1188 protein	Putative oxidoreductase/dehydrogenase	Putative zinc-binding dehydrogenase	Oxidoreductase, zinc-binding dehydrogenase family protein	Putative oxidoreductase	Putative oxidoreductase	quinone oxidoreductase	Quinone oxidoreductase	Putative NADP-dependent oxidoreductase	Residues 1 to 376 of 398 are 98 pct identical to residues 1 to 376 of a 376 aa protein from Escherichia coli K12 ref: NP_415966.1 putative oxidoreductase	Similar to quinone oxidoreductase	identified by match to protein family HMM PF00107 NADP-dependent oxidoreductase, L4bD family	Alcohol dehydrogenase protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark quinone oxidoreductase	IPR002085: Zinc-containing alcohol dehydrogenase superfamily putative NADP-dependent oxidoreductase	similar to Salmonella typhi CT18 putative NADP-dependent oxidoreductase putative NADP-dependent oxidoreductase	Quinone oxidoreductase	hypothetical protein, similar to quinone oxidoreductase	Alcohol dehydrogenase, zinc-containing	Putative NADP-dependent oxidoreductase	quinone oxidoreductase	identified by match to protein family HMM PF00107 oxidoreductase, zinc-binding	
ECOLI01405	Uncharacterized HTH-type transcriptional regulator yncC	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Putative regulatory protein	probable GntR-family transcriptional regulator; glimmer prediction; highly similar to AtrA of Agrobacterium tumefaciens; glimmer prediction; similarity to gntR family of bacterial regulatory proteins AtrA transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative uncharacterized protein	Transcriptional regulator, GntR family	Residues 1 to 240 of 240 are 95 pct identical to residues 1 to 240 of a 240 aa protein from Escherichia coli K12 ref: NP_415967.1 orf, conserved hypothetical protein	Putative uncharacterized protein	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	best blastp match gb|AAK34046.1| (AE006559) putative transcriptional regulator [Streptococcus pyogenes M1 GAS] putative transcriptional regulator	Putative gntR family regulatory protein	identified by match to protein family HMM PF00392 transcriptional regulator, GntR family	regulatory protein GntR, HTH:GntR, C-terminal	transcriptional regulator, GntR family	transcriptional regulator, GntR family	GntR-family transcriptional regulator	Transcriptional regulator, GntR family	Code: K; COG: COG1802; orf conserved hypothetical protein	Transcriptional regulator, GntR family	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH: (3.1e-13) GntR-like: (1.2e-09) KEGG: sil:SPO3470 transcriptional regulator, GntR family, ev=9e-71, 65% identity	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH GntR-like KEGG: bld:BLi01972 hypothetical protein	transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392	transcriptional regulator, putative	Transcriptional regulator, GntR family	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: bcn:Bcen_5547 transcriptional regulator, GntR family	putative transcriptional regulator (GntR-family) Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	
ECOLI01406	Probable tonB-dependent receptor yncD	Putative uncharacterized protein	Probable TonB-dependent receptor YncD	pseudo	Probable TonB-dependent receptor	pseudo	Putative outer membrane receptor for iron transport	TonB-dependent receptor protein	paral putative outer membrane receptor	similar to Salmonella typhi Ty2 probable TonB-dependent receptor probable TonB-dependent receptor	Iron transporter	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type prc : putative receptor putative tonB-dependent receptor protein	COG1629 probable iron transport receptor	Outer membrane protein	Putative outer membrane receptor	predicted TonB-dependent receptor protein	TonB-dependent receptor	TonB-dependent receptor:TonB box, N-terminal	TonB-dependent receptor	Code: P; COG: COG1629 putative outer membrane receptor for iron transport	Code: P; COG: COG1629 putative outer membrane receptor for iron transport	transporter, outer membrane receptor (OMR) family identified by match to protein family HMM PF00593; match to protein family HMM PF07715	TonB-dependent receptor	Code: P; COG: COG1629 putative outer membrane receptor for iron transport	TonB-dependent receptor	TonB-dependent outer membrane receptor	TonB-dependent receptor	Probable tonB-dependent receptor YncD	iron transporter identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	
ECOLI01407	Uncharacterized protein yncE	Uncharacterized protein yncE	Putative uncharacterized protein	Hypothetical protein yncE	Uncharacterized protein yncE	putative periplasmic protein	similar to Salmonella typhi CT18 possible ATP-binding protein possible ATP-binding protein	Uncharacterized protein yncE	Code: S; COG: COG3391 putative receptor	conserved hypothetical protein	Code: S; COG: COG3391 putative receptor	Code: S; COG: COG3391 putative receptor	Putative uncharacterized protein	40-residue YVTN beta-propeller repeat	Putative uncharacterized protein yncE	hypothetical protein KEGG: ssn:SSO_1681 putative receptor	conserved hypothetical protein Conserved hypothetical protein TMHMM2 reporting the presence of 1 TMH's. No Signal peptide present. Has 2 WD40 repeats;SMART;SM00320, Beta-transducin (G-beta) is one of the three subunits (alpha, beta, and gamma) of the guanine nucleotide-binding proteins (G proteins) which act as intermediaries in the transduction of signals generated by transmembrane receptors (see IPR001632). The alpha subunit binds to and hydrolyzes GTP; the functions of the beta and gamma subunits are less clear but they seem to be required for the replacement of GDP by GTP as well as for membrane anchoring and receptor recognition. Function unclear	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative receptor	Putative uncharacterized protein	Putative uncharacterized protein	Putative receptor precursor	Conserved protein	Putative uncharacterized protein	Putative receptor precursor	Putative uncharacterized protein	
ECOLI01408	L-asparagine permease	L-asparagine permease	L-asparagine permease	L-asparagine permease	L-asparagine permease	CDS_ID OB3196 amino acid transporter	L-asparagine permease	L-asparagine permease	L-asparagine permease protein	proline-specific permease	IPR002293: Amino acid/polyamine transporter, family I; IPR004840: Amino acid permease; IPR004841: Amino acid permease-associated region APC family, L-asparagine transport protein	similar to Salmonella typhi CT18 L-asparagine permease L-asparagine permease	L-asparagine permease, APC family	L-asparagine permease	L-asparagine permease	Cationic amino acid transporter	Code: E; COG: COG1113 L-asparagine permease	Code: E; COG: COG1113 L-asparagine permease	Code: E; COG: COG1113 L-asparagine permease	Amino acid permease-associated region	L-asparagine permease protein Similar to AsnP [Rhizobium etli] and AGR_L_2082p [Agrobacterium tumefaciens] Similar to entrez-protein:AAF00928.1 Putative location:bacterial inner membrane Psort-Score: 0.5946; go_component: membrane [goid 0016020]; go_function: amino acid-polyamine transporter activity [goid 0005279]; go_process: transport [goid 0006810]; go_process: amino acid transport [goid 0006865]	L-asparagine permease	L-asparagine permease	L-asparagine permease	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: bcn:Bcen_1499 amino acid permease-associated region	L-asparagine permease	L-asparagine permease AnsP1 membrane protein involved in L-asparagine transport	Hypothetical protein	L-asparagine permease	
ECOLI01409	Uncharacterized GST-like protein yncG	Putative glutathione S-transferase	Putative glutathione S-transferase	Putative glutathione S-transferase	Putative transferase	glutathione S-transferase	identified by similarity to GB:CAE33393.1 conserved hypothetical protein	identified by similarity to SP:P39100 glutathione S-transferase domain protein	Code: O; COG: COG0625 putative transferase	Code: O; COG: COG0625 putative transferase	Glutathione S-transferase-like	Code: O; COG: COG0625 putative transferase	Glutathione S-transferase	Glutathione S-transferase-like protein	Glutathione S-transferase, N-terminal domain PFAM: Glutathione S-transferase, N-terminal domain KEGG: bpe:BP1270 putative glutathione S-transferase	glutathione S-transferase domain protein identified by match to protein family HMM PF02798	conserved hypothetical protein	Hypothetical GST-like protein	Putative glutathione S-transferase	Predicted enzyme	Transferase homolog	Putative transferase	Putative uncharacterized protein	Putative uncharacterized protein	Glutathione S-transferase family protein	Putative transferase	Glutathione S-transferase	Glutathione S-transferase domain protein	Transferase homolog	
ECOLI01410	Uncharacterized protein yncH	conserved hypothetical protein	orf conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	YncH protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI01411	Putative protein rhsE	RHS protein	YD repeat protein TIGRFAM: YD repeat protein PFAM: YD repeat-containing protein KEGG: bxe:Bxe_A4426 rhs family protein	pseudo	YD repeat protein	pseudo	YD repeat protein	RHS Repeat family protein	pseudo	Putative uncharacterized protein	
ECOLI01412	Uncharacterized protein ydcD	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein ydcD	Putative uncharacterized protein ydcD	YdcD protein	Predicted protein	conserved predicted protein fused ECs0243/ECs0244, similar to ECs0243 (N-terminal part), 92.9% identity in 56 aa overlap, similar to ECs0244 (C-terminal part), 97.7% identity in 87 aa overlap	Putative uncharacterized protein	

ECOLI01414	H repeat-associated protein ydcC	Conserved protein	Conserved protein	
ECOLI01416	Uncharacterized protein yddH	Hypothetical protein yddH	Putative uncharacterized protein	Putative uncharacterized protein	Flavin reductase protein	Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Hypothetical protein	identified by match to protein family HMM PF01613 oxidoreductase, putative	identified by match to protein family HMM PF01613 flavin reductase domain protein	Flavin reductase-like, FMN-binding	Code: R; COG: COG1853 conserved hypothetical protein	putative flavoredoxin	Flavin reductase-like, FMN-binding	Flavin reductase-like, FMN-binding	NAD(P)H-flavin oxidoreductase identified by match to protein family HMM PF01613	Putative uncharacterized protein	flavin reductase-like, FMN-binding	flavin reductase-like, FMN-binding	Putative uncharacterized protein yddH	flavin reductase domain protein, FMN-binding PFAM: flavin reductase domain protein, FMN-binding KEGG: bur:Bcep18194_A4508 flavin reductase-like, FMN-binding	flavin reductase domain protein, FMN-binding PFAM: flavin reductase domain protein, FMN-binding KEGG: bcn:Bcen_0883 flavin reductase-like, FMN-binding	conserved hypothetical protein Hypothetical protein yddH. TREMBL:Q7NTI1:66% identity, 76% similarity InterPro:IPR002563; Flavin_Reduct.  Pfam:PF01613; Flavin_Reduct; InterPro: Flavin reductase-like domain Non-secretory protein with no signal peptide. No transmembrane helices TIGR00357: PilB-related protein High confidence in function and specificity	Putative flavin reductase	flavin reductase domain protein, FMN-binding PFAM: flavin reductase domain protein, FMN-binding KEGG: gme:Gmet_1443 flavin reductase-like, FMN-binding	Hypothetical protein	putative NAD(P)H-flavin oxidoreductase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	Universally conserved protein	Flavin reductase-like protein	Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family	conserved hypothetical protein	
ECOLI01415	Tautomerase pptA	Tautomerase pptA	Similar to unknown protein YdcE of Escherichia coli	Code: R; COG: COG1942 conserved hypothetical protein	4-oxalocrotonate tautomerase PFAM: 4-oxalocrotonate tautomerase KEGG: aba:Acid345_2511 4-oxalocrotonate tautomerase	Hypothetical protein	4-oxalocrotonate tautomerase	4-oxalocrotonate tautomerase	Tautomerase enzyme family protein	4-oxalocrotonate tautomerase	4-oxalocrotonate tautomerase	Tautomerase enzyme family protein	4-oxalocrotonate tautomerase	Tautomerase enzyme family protein	Putative uncharacterized protein	Tautomerase enzyme family protein	Tautomerase enzyme family protein	Putative uncharacterized protein	4-oxalocrotonate tautomerase	Putative tautomerase ydcE	4-oxalocrotonate tautomerase	Putative tautomerase ydcE	pseudo	Putative uncharacterized protein	Tautomerase pptA	4-oxalocrotonate tautomerase	4-oxalocrotonate tautomerase	Tautomerase pptA	4-oxalocrotonate tautomerase	
ECOLI01417	N-hydroxyarylamine O-acetyltransferase	Arylamine N-acetyltransferase	N-hydroxyarylamine O-acetyltransferase	N-acetyltransferase family protein; possible N- hydroxyarylamine O-acetyltransferase	Putative N-hydroxyarylamine O-acetyltransferase	N-hydroxyarylamine O-acetyltransferase	Putative acetyltransferase	N-hydroxyarylamine O-acetyltransferase	Putative N-hydroxyarylamine O-acetyltransferase	Putative N-hydroxyarylamine O-acetyltransferase	arylamine N-acetyltransferase (EC 2.3.1.5)	Similar to N-hydroxyarylamine O-acetyltransferase	identified by match to protein family HMM PF00797 N-acetyltransferase family protein	N-hydroxyarylamine O-acetyltransferase	NhoA	Arylamine N-acetyltransferase	Mb3596c, nat, len: 283 aa. Equivalent to Rv3566c, len: 283 aa, from Mycobacterium tuberculosis H37Rv, (100.0% identity in 283 aa overlap). nat (alternate gene name: nhoA), arylamine N-acetyltransferase (EC 2.3.1.5) (see citation below), highly similar to O86309|NAT_MYCSM ARYLAMINE N-ACETYLTRANSFERASE from Mycobacterium smegmatis (see citation below) (275 aa), FASTA scores: opt: 1114, E(): 3e-66, (60.95% identity in 274 aa overlap). Also highly similar to others e.g. Q98D42|BAB51429|MLR4870 from Rhizobium loti (Mesorhizobium loti) (278 aa), FASTA scores: opt: 697, E(): 1.1e-38, (44.1% identity in 272 aa overlap); P77567|NHOA_ECOLI|B1463 from Escherichia coli strain K12 (281 aa), FASTA scores: opt: 537, E(): 4.4e-28, (38.85% identity in 273 aa overlap); Q00267|NHOA_SALTY from Salmonella typhimurium (281 aa), FASTA scores: opt: 507, E(): 4.3e-26, (34.8% identity in 273 aa overlap); etc. BELONGS TO THE ARYLAMINE N-ACETYLTRANSFERASE FAMILY.  Note that previously known as nhoA (332 aa) and that nucleotide 4007874 has been changed since first submission (G deleted). ARYLAMINE N-ACETYLTRANSFERASE NAT (ARYLAMINE ACETYLASE)	Molecular Function: subtilase activity (GO:0004289), Biological Process: proteolysis and peptidolysis (GO:0006508) arylamine N-acetyltransferase	similar to Salmonella typhi CT18 N-hydroxyarylamine O-acetyltransferase N-hydroxyarylamine O-acetyltransferase	hypothetical protein, similar to N-hydroxyarylamine O-acetyltransferase	Ortholog of S. aureus MRSA252 (BX571856) SAR2779 putative N-acetyltransferase	hypothetical protein, similar to N-hydroxyarylamine O-acetyltransferase	N-hydroxyarylamine O-acetyltransferase	identified by similarity to SP:P77567; match to protein family HMM PF00797 N-acetyltransferase family protein	Arylamine N-acetyltransferase	N-hydroxyarylamine O-acetyltransferase (arylamine N-acetyltransferase)	hypothetical protein, similar to N-hydroxyarylamine O-acetyltransferase/arylamine N-acetyltransferase	identified by similarity to SP:Q00267; match to protein family HMM PF00797 N-hydroxyarylamine O-acetyltransferase, putative	N-acetyltransferase	
ECOLI01418	Uncharacterized isomerase yddE	Uncharacterized isomerase slr1019	Vng0332c	Putative phenazine biosynthesis protein	Phenazine biosynthesis protein PhzF family	Uncharacterized isomerase CC_3221	Phenazine/pyocyanine biosynthesis protein phzF	Predicted epimerase	Uncharacterized isomerase DR_1330	Phenazine biosynthesis protein phzF	Phenazine biosynthesis protein	Putative uncharacterized protein STY1484	Phenazine biosynthesis protein, PhzF family	Lmo0789 protein	Phenazine biosynthesis protein phzF	Possible phenazine biosynthesis protein, PhzF family	Hypothetical protein yddE	diaminopimelate epimerase	identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654 phenazine biosynthesis protein, PhzF family	conserved hypothetical protein	PMID: 8586283 best DB hits: BLAST: ddbj:BAB04002.1; (AP001508) BH0283~unknown conserved protein; E=5e-62 pir:E83199; conserved hypothetical protein PA3578 [imported] -; E=1e-57 pir:A83301; hypothetical protein PA2770 [imported] - Pseudomonas; E=3e-56 COG: BH0283; COG0384 Predicted epimerase, PhzC/PhzF homolog; E=5e-63 PFAM: PF02567; Phenazine biosynthesis-like protein; E=7.7e-27 conserved hypothetical protein-putative phenazine biosynthesis protein PhzF	glimmer prediction conserved hypothetical protein	Putative oxidoreductase	pseudo	Uncharacterized isomerase yddE	Uncharacterized isomerase CA_C3446	Uncharacterized isomerase BH1950	Predicted epimerase	similar to unknown protein hypothetical protein	
ECOLI01419	Respiratory nitrate reductase 2 gamma chain	Respiratory nitrate reductase 2 gamma chain	Respiratory nitrate reductase 2 gamma chain	Respiratory nitrate reductase 2 gamma chain	Nitrate reductase, gamma chain	similar to Salmonella typhimurium nitrate reductase 2, gamma subunit nitrate reductase 2, gamma subunit	Nitrate reductase 2, gamma subunit	Code: C; COG: COG2181 cryptic nitrate reductase 2, gamma subunit	Code: C; COG: COG2181 cryptic nitrate reductase 2, gamma subunit	Nitrate reductase 2, gamma subunit	Respiratory nitrate reductase, gamma subunit	Respiratory nitrate reductase 2 gamma chain	Respiratory nitrate reductase, gamma subunit	respiratory nitrate reductase, gamma subunit TIGRFAM: respiratory nitrate reductase, gamma subunit PFAM: Nitrate reductase, gamma subunit KEGG: mmc:Mmcs_1260 respiratory nitrate reductase, gamma subunit	respiratory nitrate reductase, gamma subunit TIGRFAM: respiratory nitrate reductase, gamma subunit PFAM: Nitrate reductase, gamma subunit KEGG: mmc:Mmcs_1260 respiratory nitrate reductase, gamma subunit	Respiratory nitrate reductase, gamma subunit	respiratory nitrate reductase 2 gamma chain	respiratory nitrate reductase, gamma subunit TIGRFAM: respiratory nitrate reductase, gamma subunit PFAM: Nitrate reductase, gamma subunit KEGG: mmc:Mmcs_1260 respiratory nitrate reductase, gamma subunit	Respiratory nitrate reductase gamma subunit	Cryptic nitrate reductase 2 gamma subunit	Respiratory nitrate reductase, gamma subunit	respiratory nitrate reductase, gamma subunit TIGRFAM: respiratory nitrate reductase, gamma subunit PFAM: Nitrate reductase, gamma subunit KEGG: mmc:Mmcs_1260 respiratory nitrate reductase, gamma subunit	Nitrate reductase 2 (NRZ), gamma subunit	Respiratory nitrate reductase, gamma subunit	Respiratory nitrate reductase, gamma subunit	Respiratory nitrate reductase 2, gamma subunit	Putative uncharacterized protein	Putative uncharacterized protein	Respiratory nitrate reductase, gamma subunit	
ECOLI01420	Respiratory nitrate reductase 2 delta chain	Respiratory nitrate reductase 2 delta chain	Putative respiratory nitrate reductase delta chain	Respiratory nitrate reductase 2 delta chain	Nitrate reductase, delta subunit	Cryptic nitrate reductase 2, delta subunit, assembly function	Nitrate reductase 2, delta subunit	Nitrate reductase, delta subunit	Code: C; COG: COG2180 cryptic nitrate reductase 2, delta subunit, assembly function	Code: C; COG: COG2180 cryptic nitrate reductase 2, delta subunit, assembly function	nitrate reductase, delta subunit identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684	Respiratory nitrate reductase 2 delta chain	nitrate reductase molybdenum cofactor assembly chaperone	Cryptic nitrate reductase 2 delta subunit	nitrate reductase, delta subunit identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684	cryptic nitrate reductase 2 delta subunit	Nitrate reductase molybdenum cofactor assembly chaperone	Respiratory nitrate reductase subunit delta	Respiratory nitrate reductase chaperone NarJ	Respiratory nitrate reductase chaperone NarJ	Nitrate reductase, delta subunit	Cryptic nitrate reductase 2 delta subunit	Respiratory nitrate reductase 2 delta chain	Nitrate reductase molybdenum cofactor assembly chaperone	Nitrate reductase 2 (NRZ), delta subunit	Respiratory nitrate reductase 2 delta chain	Nitrate reductase molybdenum cofactor assembly chaperone	Nitrate reductase molybdenum cofactor assembly chaperone 2	Nitrate reductase, delta subunit	
ECOLI01421	Respiratory nitrate reductase 2 beta chain	Respiratory nitrate reductase 2 beta chain	Respiratory nitrate reductase 2 beta chain	Cryptic nitrate reductase 2, beta subunit	IPR000345: Cytochrome c heme-binding site nitrate reductase 2, beta subunit	similar to Salmonella typhi CT18 respiratory nitrate reductase 2 beta chain respiratory nitrate reductase 2 beta chain	Nitrate reductase 2, beta subunit	Code: C; COG: COG1140 cryptic nitrate reductase 2, beta subunit	Code: C; COG: COG1140 cryptic nitrate reductase 2, beta subunit	Respiratory nitrate reductase 2 beta chain	Cryptic nitrate reductase 2, beta subunit	cryptic nitrate reductase 2, beta subunit	Respiratory nitrate reductase beta subunit	Cryptic nitrate reductase 2 beta subunit	Nitrate reductase, beta subunit	Nitrate reductase 2 (NRZ), beta subunit	Nitrate reductase, beta subunit	Nitrate reductase, beta subunit	Nitrate reductase 2, beta subunit	Putative uncharacterized protein	Putative uncharacterized protein	Respiratory nitrate reductase 2 beta chain	Nitrate reductase 2, beta subunit	Nitrate reductase 2, beta subunit	Nitrate reductase 2, beta subunit	Respiratory nitrate reductase 2 beta chain	Nitrate reductase 2, beta subunit	Nitrate reductase 2, beta subunit	Nitrate reductase 2, beta subunit	
ECOLI01422	Respiratory nitrate reductase 2 alpha chain	Respiratory nitrate reductase 2 alpha chain	Respiratory nitrate reductase 2 alpha chain	Cryptic nitrate reductase 2, alpha subunit	similar to Escherichia coli K12 cryptic nitrate reductase 2, alpha subunit  ref: NP_415985.1 (1246 aa).  BLAST with identity of 100% in 1266 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	similar to Salmonella typhi CT18 respiratory nitrate reductase 2 alpha chain respiratory nitrate reductase 2 alpha chain	Nitrate reductase 2, alpha subunit	Code: C; COG: COG5013 cryptic nitrate reductase 2, alpha subunit	Respiratory nitrate reductase 2 a chain	Nitrate reductase, alpha subunit	Respiratory nitrate reductase 2 alpha chain	cryptic nitrate reductase 2, alpha subunit Code: C; COG: COG5013	respiratory nitrate reductase 2 alpha chain	Respiratory nitrate reductase alpha subunit apoprotein	Cryptic nitrate reductase 2 alpha subunit	Nitrate reductase, alpha subunit	Nitrate reductase, alpha subunit precursor	Nitrate reductase 2 (NRZ), alpha subunit	Nitrate reductase, alpha subunit	Nitrate reductase, alpha subunit	Nitrate reductase 2, alpha subunit	Putative uncharacterized protein	Putative uncharacterized protein	Nitrate reductase, alpha subunit	Respiratory nitrate reductase 2 alpha chain	Nitrate reductase, alpha subunit	Nitrate reductase, alpha subunit	Nitrate reductase, alpha subunit	Respiratory nitrate reductase 2 alpha chain	
ECOLI01423	Nitrite extrusion protein 2	Nitrite extrusion protein	Nitrite extrusion protein 2	Nitrite extrusion protein 2	Residues 21 to 482 of 482 are 99 pct identical to residues 1 to 462 of a 462 aa protein from Escherichia coli K12 ref: NP_415986.1 nitrite extrusion protein 2	MFS superfamily, nitrate extrusion protein	similar to Salmonella typhi CT18 nitrite extrusion protein nitrite extrusion protein	Nitrite extrusion protein 2	Code: P; COG: COG2223 nitrite extrusion protein 2	Nitrite extrusion protein 2	Nitrite extrusion protein 2	nitrite extrusion protein 2 Code: P; COG: COG2223	nitrite extrusion protein 2	Nitrite transporter precursor	Nitrate extrusion protein	Nitrite extrusion protein 2	Nitrate/nitrite transporter	Nitrite extrusion protein 2	Nitrite transporter	Nitrite extrusion protein 2	Putative uncharacterized protein	Putative uncharacterized protein	Nitrite extrusion protein 2	Nitrite extrusion protein 2	Nitrite extrusion protein 2	Nitrite extrusion protein	Nitrite extrusion protein 2	Nitrite extrusion protein 2	Nitrite extrusion protein 2	
ECOLI01424	Uncharacterized protein yddJ	Predicted protein	YddJ protein	
ECOLI01425	Putative uncharacterized protein yddK	Residues 1 to 317 of 329 are 99 pct identical to residues 1 to 317 of a 318 aa protein from Escherichia coli K12 ref: NP_415988.1 putative glycoportein	putative glycoportein Code: S; COG: COG4886	Leucine-rich repeat protein	jgi|Lotgi1|201158|estExt_Genewise1.C_sca_1650018	Predicted protein	Leucine-rich repeat protein	Putative uncharacterized protein	transcript_id=ENSPVAT00000010585	Surface antigen, putative	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	YddK protein	jgi|Capca1|192167|fgenesh1_pg.C_scaffold_34716000001	T3SS effector-like protein EspR-homolog	
ECOLI01426	Putative uncharacterized protein yddL	Code: M; COG: COG3203 putative outer membrane porin protein	Putative outer membrane porin C protein precursor	Outer membrane porin, truncation	Predicted lipoprotein	Outer membrane porin, truncation	Putative outer membrane porin protein precursor	Putative outer membrane porin protein	Outer membrane porin	Outer membrane porin	YddL protein	predicted lipoprotein	Predicted lipoprotein	
ECOLI01427	Inner membrane protein yddG	Putative permease	conserved hypothetical protein	Hypothetical protein yddG	Putative uncharacterized protein VCA0835	Putative permease	Putative uncharacterized protein yddG	Permease of the drug/metabolite transporter (DMT) superfamily	Residues 1 to 293 of 293 are 98 pct identical to residues 1 to 293 of a 293 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287682.1 orf, conserved hypothetical protein	Putative membrane protein	Probable transmembrane protein	putative permease	similar to Salmonella typhimurium putative permease putative permease	Putative uncharacterized protein	Putative DMT superfamily drug efflux pump	transporter, drug/metabolite exporter family	Putative permease	probable transmembrane protein	Code: GER; COG: COG0697 conserved hypothetical protein	Evidence 2b : Function of strongly homologous gene; PubMedId : 12410826; Product type t : transporter putative SmvA (YddG) efflux protein	Code: GER; COG: COG0697 conserved hypothetical protein	hypothetical protein	Code: GER; COG: COG0697; orf conserved hypothetical protein	Putative uncharacterized protein precursor	Protein of unknown function DUF6, transmembrane	Probable transmembrane protein	Putative membrane protein precursor	Putative SmvA (YddG) efflux protein	putative transmembrane protein	
ECOLI01428	Formate dehydrogenase, nitrate-inducible, major subunit	Formate dehydrogenase major subunit	Formate dehydrogenase, nitrate-inducible, major subunit	Selenium-containing formate dehydrogenase, nitrate inducible, alpha subunit	Formate dehydrogenase, nitrate-inducible, major subunit	Formate dehydrogenase-N, nitrate-inducible, alpha subunit	Residues 1 to 1015 of 1015 are 99 pct identical to residues 1 to 1015 of a 1015 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287681.1 formate dehydrogenase-N, nitrate-inducible, alpha subunit	similar to Salmonella typhimurium putative molybdopterin oxidoreductases; selenocysteine putative molybdopterin oxidoreductases	formate dehydrogenase alpha subunit; FDH alpha subunit; Similar to: FDXG_HAEIN; Opal (TGA) stop encodes selenocysteine formate dehydrogenase major subunit	Putative molybdopterin oxidoreductases	Code: C; COG: COG0243; selenocysteine formate dehydrogenase-N, nitrate-inducible, alpha subunit	Code: C; COG: COG0243; selenocysteine formate dehydrogenase N, nitrate-inducible, alpha subunit	Formate dehydrogenase, alpha subunit, anaerobic selenocysteine	Formate dehydrogenase, nitrate-inducible, major subunit	Formate dehydrogenase, alpha subunit	FdnG, alpha subunit of formate dehydrogenase-N	Anaerobic dehydrogenases, typically selenocysteine-containing	formate dehydrogenase-N, nitrate-inducible, alpha subunit Code: C; COG: COG0243; selenocysteine	formate dehydrogenase alpha subunit	formate dehydrogenase, alpha subunit KEGG: dde:Dde_0717 formate dehydrogenase, alpha subunit, anaerobic TIGRFAM: formate dehydrogenase, alpha subunit PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region	Formate dehydrogenase, alpha subunit	FdnG, alpha subunit of formate dehydrogenase-N	Formate dehydrogenase major subunit	Formate dehydrogenase major subunit	Formate dehydrogenase, nitrate-inducible, major subunit	Formate dehydrogenase alpha subunit	Putative uncharacterized protein fdnG	Formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing	Formate dehydrogenase-N, alpha subunit, nitrate- inducible	
ECOLI01428	Formate dehydrogenase, nitrate-inducible, major subunit	Formate dehydrogenase major subunit	Formate dehydrogenase, nitrate-inducible, major subunit	Selenium-containing formate dehydrogenase, nitrate inducible, alpha subunit	Formate dehydrogenase, nitrate-inducible, major subunit	Formate dehydrogenase-N, nitrate-inducible, alpha subunit	Residues 1 to 1015 of 1015 are 99 pct identical to residues 1 to 1015 of a 1015 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287681.1 formate dehydrogenase-N, nitrate-inducible, alpha subunit	similar to Salmonella typhimurium putative molybdopterin oxidoreductases; selenocysteine putative molybdopterin oxidoreductases	formate dehydrogenase alpha subunit; FDH alpha subunit; Similar to: FDXG_HAEIN; Opal (TGA) stop encodes selenocysteine formate dehydrogenase major subunit	Putative molybdopterin oxidoreductases	Code: C; COG: COG0243; selenocysteine formate dehydrogenase-N, nitrate-inducible, alpha subunit	Code: C; COG: COG0243; selenocysteine formate dehydrogenase N, nitrate-inducible, alpha subunit	Formate dehydrogenase, alpha subunit, anaerobic selenocysteine	Formate dehydrogenase, nitrate-inducible, major subunit	Formate dehydrogenase, alpha subunit	FdnG, alpha subunit of formate dehydrogenase-N	Anaerobic dehydrogenases, typically selenocysteine-containing	formate dehydrogenase-N, nitrate-inducible, alpha subunit Code: C; COG: COG0243; selenocysteine	formate dehydrogenase alpha subunit	formate dehydrogenase, alpha subunit KEGG: dde:Dde_0717 formate dehydrogenase, alpha subunit, anaerobic TIGRFAM: formate dehydrogenase, alpha subunit PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region	Formate dehydrogenase, alpha subunit	FdnG, alpha subunit of formate dehydrogenase-N	Formate dehydrogenase major subunit	Formate dehydrogenase major subunit	Formate dehydrogenase, nitrate-inducible, major subunit	Formate dehydrogenase alpha subunit	Putative uncharacterized protein fdnG	Formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing	Formate dehydrogenase-N, alpha subunit, nitrate- inducible	
ECOLI01429	Formate dehydrogenase, nitrate-inducible, iron- sulfur subunit	Formate dehydrogenase-N beta subunit	Formate dehydrogenase, nitrate-inducible, iron- sulfur subunit	Formate dehydrogenase-N, nitrate-inducible, iron- sulfur beta subunit	Residues 1 to 294 of 294 are 100 pct identical to residues 1 to 294 of a 294 aa protein from Escherichia coli K12 ref: NP_415992.1 formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible	similar to Salmonella typhimurium formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible	Formate dehydrogenase-N, Fe-S beta subunit	Code: C; COG: COG0437 formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit	identified by similarity to SP:P32175; match to protein family HMM PF00037 formate dehydrogenase-O, iron-sulfur subunit	Code: C; COG: COG0437 formate dehydrogenase N, nitrate-inducible, iron-sulfur beta subunit	Code: C; COG: COG0437 formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit	Formate dehydrogenase, nitrate-inducible, iron- sulfur subunit	Formate dehydrogenase-N beta subunit	formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit Code: C; COG: COG0437	Formate dehydrogenase, iron-sulfur subunit	Formate dehydrogenase beta subunit	Formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible	Putative uncharacterized protein	Formate dehydrogenase, nitrate-inducible, iron- sulfur subunit	Formate dehydrogenase-N, Fe-S (Beta) subunit, nitrate-inducible	Formate dehydrogenase, nitrate-inducible, iron- sulfur subunit	Formate dehydrogenase, beta subunit precursor	Formate dehydrogenase, nitrate-inducible, iron- sulfur subunit	Formate dehydrogenase, beta subunit	Putative uncharacterized protein	Putative uncharacterized protein	Formate dehydrogenase, iron-sulfur subunit	Formate dehydrogenase, nitrate-inducible, iron- sulfur subunit	
ECOLI01430	Formate dehydrogenase, nitrate-inducible, cytochrome b556(fdn) subunit	Formate dehydrogenase-N gamma subunit	Formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit	Formate dehydrogenase, nitrate-inducible, cytochrome b556	Formate dehydrogenase, nitrate-inducible, cytochrome b556(fdn) subunit	Residues 7 to 223 of 223 are 100 pct identical to residues 1 to 217 of a 217 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287679.1 formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit	formate dehydrogenase-N, cytochrome B556(Fdn) gamma subunit, nitrate-inducible	similar to Salmonella typhimurium formate dehydrogenase-N, cytochrome B556(Fdn) gamma subunit, nitrate-inducible formate dehydrogenase-N, cytochrome B556(Fdn) gamma subunit, nitrate-inducible	formate dehydrogenase gamma subunit; FDH gamma subunit; Similar to: HI0008, FDXI_HAEIN formate dehydrogenase, cytochrome B556 subunit	Formate dehydrogenase-N, cytochrome B556(Fdn) gamma subunit	Code: C; COG: COG2864 formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit	Code: C; COG: COG2864 formate dehydrogenase N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit	Code: C; COG: COG2864 formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit	Formate dehydrogenase	Formate dehydrogenase, gamma subunit	Formate dehydrogenase, gamma subunit precursor	Formate dehydrogenase-N gamma subunit	Formate dehydrogenase, gamma subunit	formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit Code: C; COG: COG2864	formate dehydrogenase gamma subunit 4 TMHs	Formate dehydrogenase, gamma subunit	formate dehydrogenase-N gamma subunit	Formate dehydrogenase, gamma subunit	TIGRFAM: formate dehydrogenase, gamma subunit KEGG: she:Shewmr4_0104 formate dehydrogenase, gamma subunit formate dehydrogenase, gamma subunit	Formate dehydrogenase-N, cytochrome B556(Fdn) gamma subunit, nitrate-inducible	Putative uncharacterized protein	Formate dehydrogenase, gamma subunit	Formate dehydrogenase, gamma subunit	Formate dehydrogenase, gamma subunit precursor	
ECOLI00309	Putative uncharacterized protein yahH	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	YahH protein	Putative uncharacterized protein	
ECOLI01431	Uncharacterized HTH-type transcriptional regulator yddM	Virulence-associated protein, putative	Putative uncharacterized protein yddM	Virulence-associated protein	Residues 1 to 120 of 120 are 97 pct identical to residues 1 to 120 of a 120 aa protein from Escherichia coli K12 ref: NP_415994.1 orf, conserved hypothetical protein	Similar to unknown protein YddM of Escherichia coli	Antidote protein, putative	Plasmid maintenance system antidote protein	Code: R; COG: COG3093 conserved hypothetical protein	Code: R; COG: COG3093 conserved hypothetical protein	addiction module antidote protein, HigA family identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607	putative plasmid maintenance system antidote protein, XRE family	plasmid maintenance system antidote protein, XRE family	Code: R; COG: COG3093; orf conserved hypothetical protein	putative plasmid maintenance system antidote protein, XRE family	Putative HTH-type transcriptional regulator YddM	Plasmid maintenance system antidote protein, XRE family	Putative uncharacterized protein	plasmid maintenance system antidote protein, XRE family TIGRFAM: addiction module antidote protein, HigA family PFAM: helix-turn-helix domain protein KEGG: rpc:RPC_4756 putative plasmid maintenance system antidote protein, XRE family	Antidote protein	putative virulence-associated protein	conserved hypothetical protein Code: R; COG: COG3093	conserved hypothetical protein	Plasmid maintenance system antidote protein, XRE family	Addiction module antidote protein, HigA family	Plasmid maintenance system antidote system, putative	Addiction module antidote protein, HigA family	Plasmid maintenance system antidote protein, XRE family	Plasmid maintenance system antidote protein, XRE family	
ECOLI01432	Alcohol dehydrogenase, propanol-preferring	Glucose-repressible alcohol dehydrogenase II, catalyzes the conversion of ethanol to acetaldehyde; involved in the production of certain carboxylate esters; regulated by ADR1. [Source:SGD;Acc:S000004918]	Alcohol dehydrogenase [Source:GeneDB_Spombe;Acc:SPCC13B11.01]	gi|113358|sp|P20369|ADH1_KLULA Kluyveromyces lactis Alcohol dehydrogenase I, start by similarity	Alcohol dehydrogenase, zinc-containing	Alcohol dehydrogenase, propanol-preferring	Alcohol dehydrogenase	Alcohol dehydrogenase	Putative alcohol dehydrogenase, zinc-containing	Alcohol dehydrogenase	Alcohol dehydrogenase, zinc-containing	Alcohol dehydrogenase	Alcohol dehydrogenase, propanol-preferring	Alcohol dehydrogenase, zinc-containing	identified by match to protein family HMM PF00107 alcohol dehydrogenase, zinc-containing	similar to SP:P42327; identified by sequence similarity; putative alcohol dehydrogenase, zinc-containing	similar to mannitol-1-phosphate dehydrogenase GI:9957089 from [Cryptococcus neoformans]; go_component: soluble fraction [goid 0005625]; go_component: mitochondrial matrix [goid 0005759]; go_function: alcohol dehydrogenase activity [goid 0004022]; go_process: fermentation [goid 0006113] mannitol-1-phosphate dehydrogenase, putative	AdhA1 alcohol	alcohol dehydrogenase	Putative alcohol dehydrogenase I	Alcohol dehydrogenase, zinc-containing	ALCOHOL DEHYDROGENASE	Alcohol dehydrogenase	Alcohol dehydrogenase	similar to AX065083-1|CAC25781.1| percent identity: 77 in 337 aa putative alcohol dehydrogenase	Alcohol dehydrogenase	SCJ12.11c, probable alcohol dehydrogenase, len: 340 aa. Highly similar to many e.g. Bacillus stearothermophilus SW:ADH3_BACST (EMBL; Z27089) alcohol dehydrogenase (EC 1.1.1.1) (ADH-HT) (339 aa), fasta scores opt: 1281 z-score: 1383.7 E(): 0 55.2% identity in 337 aa overlap. Contains a PS00059 Zinc-containing alcohol dehydrogenases signature and a Pfam match to entry PF00107 adh_zinc, Zinc-binding dehydrogenases. putative alcohol dehydrogenase	Residues 1 to 335 of 336 are 98 pct identical to residues 11 to 345 of a 346 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287677.1 alcohol dehydrogenase	Alcohol dehydrogenase	
ECOLI01433	NAD-dependent malic enzyme	Mitochondrial malic enzyme, catalyzes the oxidative decarboxylation of malate to pyruvate, which is a key intermediate in sugar metabolism and a precursor for synthesis of several amino acids.  [Source:SGD;Acc:S000001512]	Malic enzyme	NAD-dependent malic enzyme [Source:GeneDB_Spombe;Acc:SPCC794.12c]	highly similar to sp|P36013 Saccharomyces cerevisiae YKL029c MAE1 malic enzyme singleton, hypothetical start	highly similar to uniprot|P36013 Saccharomyces cerevisiae YKL029c MAE1 malic enzyme;	NAD-dependent malic enzyme	NAD-dependent malic enzyme 1	Malate oxidoreductase	NADP-dependent malic enzyme	NAD-dependent malic enzyme	NAD-dependent malic enzyme	putative malate oxidoreductase	NAD-dependent malic enzyme	NAD-dependent malic enzyme	NAD-dependent malic enzyme	go_component: mitochondrion [goid 0005739]; go_function: malate dehydrogenase (oxaloacetate-decarboxylating) activity [goid 0016619]; go_process: pyruvate metabolism [goid 0006090]; go_process: amino acid metabolism [goid 0006520] malate dehydrogenase, putative	NAD-dependent malic enzyme	NAD-dependent malic enzyme	NAD-dependent malic enzyme	malic enzyme	NAD-dependent malic enzyme	Malolactic enzyme	NAD-dependent malic enzyme	NAD-dependent malic enzyme	2SC7G11.23, probable malate oxidoreductase, len: 409 aa; similar to SW:MAOX_BACST (EMBL:M19485) Bacillus stearothermophilus NAD-dependent malic enzyme (EC 1.1.1.38), 478 aa; fasta scores: opt: 1385 z-score: 1470.9 E(): 0; 55.0% identity in 391 aa overlap. Contains 2x Pfam matches to entry PF00390 malic, Malic enzyme putative malate oxidoreductase	NAD-dependent malic enzyme	Residues 4 to 577 of 577 are 99 pct identical to residues 1 to 574 of a 574 aa protein from Escherichia coli K12 ref: NP_415996.1 NAD-linked malate dehydrogenase (malic enzyme)	NAD-dependent malic enzyme	
ECOLI01435	Protein bdm	Protein bdm homolog	Protein bdm homolog	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Protein bdm homolog	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein bdm	conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein	Protein bdm	Biofilm-dependent modulation protein	Protein bdm	Putative uncharacterized protein	Protein bdm	Putative uncharacterized protein	Protein bdm	Putative uncharacterized protein	Protein bdm	Protein bdm	Protein bdm	Putative uncharacterized protein yddX	Protein bdm	Protein bdm	Protein bdm	Putative uncharacterized protein yddX	Biofilm-dependent modulation protein	
ECOLI01436	Peroxiredoxin osmC	Osmotically inducible protein	Putative osmotically inducible protein	Osmotically inducible protein OsmC	Osmotically inducible protein C	Osmotically inducible protein C	Osmotically inducible protein C	Lmo2199 protein	Osmotically inducible protein	Osmotically inducible protein C	pseudo	Osmotically inducible protein C	Osmotically inducible protein C	Osmotically inducible protein	Osmotically inducible protein C	hypothetical conserved protein	Osmotically inducible protein	CDS_ID OB3459 organic hydroperoxide resistance protein	Osmotically inducible protein OsmC	ATP/GTP binding protein	SC5C7.16, probable ATP/GTP binding protein, len: 141 aa; highly similar to OSMC_ECOLI osmotically inducible protein C (143 aa), fasta scores; opt: 330 z-score: 398.2 E(): 6.2e-15, 44.5% identity in 137 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) putative ATP/GTP binding protein	Lin2302 protein	Residues 1 to 143 of 143 are 100 pct identical to residues 1 to 143 of a 143 aa protein from Escherichia coli K12 ref: NP_415999.1 osmotically inducible protein	Osmotically inducible protein	OsmC-like protein; Biological Process: response to stress (GO:0006950) organic hydroperoxide resistance protein, sigmaB regulon	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark osmotically inducible protein	Osmotically inducible protein OsmC	Osmotically inducible protein	putative resistance protein, osmotically inducible	
ECOLI01437	Probable D,D-dipeptide transport ATP-binding protein ddpF	Residues 1 to 256 of 256 are 98 pct identical to residues 1 to 256 of a 308 aa protein from Escherichia coli K12 ref: NP_416000.1 putative ATP-binding component of a transport system	identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727 peptide ABC transporter, ATP-binding protein	Code: EP; COG: COG1124 putative ATP-binding component of a transport system	Code: EP; COG: COG1124 putative ATP-binding component of a transport system	Code: EP; COG: COG1124 putative ATP-binding component of a transport system	dipeptide ABC transporter, ATP-binding protein similar to dppF (Atu4620) [Agrobacterium tumefaciens str. C58] Similar to swissprot:Q8U736 Putative location:bacterial inner membrane Psort-Score: 0.1680; go_component: membrane [goid 0016020]; go_function: ATP binding [goid 0005524]; go_function: nucleotide binding [goid 0000166]; go_function: ATP-binding cassette (ABC) transporter activity [goid 0004009]; go_process: transport [goid 0006810]	putative ATP-binding component of a transport system Code: EP; COG: COG1124	ABC-type transporter, ATPase component: PepT family	Putative ABC transport system ATP-binding protein	Oligopeptide/dipeptide ABC transporter, ATPase subunit	D-ala-D-ala transporter subunit; ATP-binding component of ABC superfamily	Putative ABC transport system ATP-binding protein	Oligopeptide/dipeptide ABC transporter, ATPase subunit	Putative ABC transport system ATP-binding protein	Putative uncharacterized protein	Putative ABC transport system ATP-binding protein	Putative ABC transport system ATP-binding protein	Peptide ABC transporter ATP-binding component	status:Predicted	D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily	D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily	D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily	ABC transporter related	D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily	DdpF protein	ABC transporter related	D-ala-D-ala transporter subunit, ATP-binding component of ABC superfamily	D-ala-D-ala transporter subunit	
ECOLI01438	Probable D,D-dipeptide transport ATP-binding protein ddpD	Putative ATP-binding component of a transport system	peptide ABC transporter, ATP-binding protein	Residues 1 to 328 of 328 are 97 pct identical to residues 1 to 328 of a 328 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287671.1 putative ATP-binding component of a transport system	Oligopeptide ABC transporter	oligopeptide ABC transportor, ATP-binding protein	Code: EP; COG: COG0444 putative ATP-binding component of a transport system	Code: EP; COG: COG0444 putative ATP-binding component of a transport system	Oligopeptide/dipeptide ABC transporter, ATPase subunit	putative ATP-binding component of a transport system Code: EP; COG: COG0444	ABC transporter, ATP-binding protein	Oligopeptide/dipeptide ABC transporter, ATPase subunit	Oligopeptide/dipeptide ABC transporter, ATPase subunit	D-ala-D-ala transporter subunit; ATP-binding component of ABC superfamily	Oligopeptide/dipeptide ABC transporter, ATPase subunit	ABC transporter, ATP-binding protein	Oligopeptide/dipeptide ABC transporter, ATPase subunit	ABC transporter, ATP-binding protein	Putative uncharacterized protein	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Peptide ABC transporter ATP-binding component	D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily	D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily	D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily	D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily	DdpD protein	D-ala-D-ala transporter subunit, ATP-binding component of ABC superfamily	D-ala-D-ala transporter subunit	
ECOLI01439	Probable D,D-dipeptide transport system permease protein ddpC	Putative transport protein	peptide ABC transporter, permease protein	similar to Escherichia coli K12 putative transport protein gi: 1787760 (299 aa). BLAST with identity of 98% in 299 aa. This CDS ontains frameshift. The sequence has been checked and is believed to be correct. pseudo	identified by match to protein family HMM PF00528 dipeptide ABC transporter, permease protein	Code: EP; COG: COG1173 putative transport protein	Code: EP; COG: COG1173 putative transport protein	putative transmembrane component of ABC transporter similarity:fasta; with=UniProt:Q8U734_AGRT5 (EMBL:AE008225); Agrobacterium tumefaciens (strain C58/ATCC 33970).; dppC; OrderedLocusNames=AGR_L_523,Atu4622;; ABC transporter, membrane spanning protein (AGR_L_523p). ABC transporter, membrane spanning protein (AGR_L_523p).; length=299; id 81.000; 300 aa overlap; query 1-300; subject 1-299 This CDS overlaps 41 nt at the C-terminus with RL2341	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	putative transport protein Code: EP; COG: COG1173	ABC transporter permease protein	Binding-protein-dependent transport systems inner membrane component	Inner membrane ABC transporter permease protein YddQ	Binding-protein-dependent transport systems inner membrane component	Hypothetical protein, conserved	ABC-type dipeptide/oligopeptide/nickel transport system, permease component	Putative uncharacterized protein	D-ala-D-ala transporter subunit; membrane component of ABC superfamily	Inner membrane ABC transporter permease protein yddQ	Binding-protein-dependent transport systems inner membrane component	Inner membrane ABC transporter permease protein yddQ	Dipeptide transport system permease protein dppC	Putative uncharacterized protein	Inner membrane ABC transporter permease protein yddQ	Dipeptide ABC transporter, permease protein	Oligopeptide transport system permease protein	Inner membrane ABC transporter permease protein yddQ	Peptide ABC transporter permease component	
ECOLI01440	Probable D,D-dipeptide transport system permease protein ddpB	Putative transport system permease protein	peptide ABC transporter, permease protein	Dipeptide ABC transporter	identified by match to protein family HMM PF00528 Binding-protein-dependent transport systems inner membrane component domain protein	Code: EP; COG: COG0601 putative transport system permease protein	Code: EP; COG: COG0601 putative transport system permease protein	Binding-protein-dependent transport systems inner membrane component precursor	Putative dipeptide ABC transporter, permease protein	ABC transporter D-Ala-D-Ala-binding inner membrane protein PFAM: binding-protein-dependent transport systems inner membrane component KEGG: rpb:RPB_4050 binding-protein-dependent transport systems inner membrane component	Inner membrane ABC transporter permease protein yddR	Binding-protein-dependent transport systems inner membrane component	ABC-type dipeptide/oligopeptide/nickel transport system, permease component precursor	Putative uncharacterized protein	D-ala-D-ala transporter subunit; membrane component of ABC superfamily	Inner membrane ABC transporter permease protein yddR	Binding-protein-dependent transport systems inner membrane component	Inner membrane ABC transporter permease protein yddR	Putative uncharacterized protein	Binding-protein-dependent transport systems inner membrane component precursor	Inner membrane ABC transporter permease protein yddR	Peptide ABC transporter permease component	Dipeptide transport system permease protein dppB	D-ala-D-ala transporter subunit ; membrane component of ABC superfamily	D-ala-D-ala transporter subunit ; membrane component of ABC superfamily	D-ala-D-ala transporter subunit ; membrane component of ABC superfamily	D-ala-D-ala transporter subunit ; membrane component of ABC superfamily	DdpB protein	Peptide ABC transporter, permease protein	
ECOLI01441	Probable D,D-dipeptide-binding periplasmic protein ddpA	Dipeptide ABC transporter, dipeptide-binding protein	similar to GB:D00760, SP:P25787,  and PID:220024; identified by sequence similarity; putative peptide ABC transporter, periplasmic peptide-binding protein, putative	hypothetical protein	Peptide ABC transporter, periplasmic peptide- binding protein	Putative hemin-binding lipoprotein	oligopeptide ABC transporter, periplasmic oligopeptide-binding protein	ABC transporter periplasmic dipeptide-binding protein	Oligopeptide Binding Protein	Similar to Bacillus subtilis oligopeptide-binding protein precursor OppA or spo0ka or bsu11430 SWALL:OPPA_BACSU (SWALL:P24141) (545 aa) fasta scores: E(): 1.3e-07, 26.23% id in 446 aa, and to Chlamydophila caviae peptide ABC transporter, periplasmic binding protein cca00599 SWALL:Q822T0 (EMBL:AE016996) (445 aa) fasta scores: E(): 9.6e-152, 81.16% id in 446 aa, and to Fusobacterium nucleatum subsp. vincentii ATCC 49256 dipeptide-binding protein fnv1219 SWALL:EAA24064 (EMBL:AABF01000057) (474 aa) fasta scores: E(): 2e-12, 26.73% id in 389 aa putative ABC transporter peptide periplasmic binding lipoprotein	Code: E; COG: COG0747 putative hemin-binding lipoprotein	Code: E; COG: COG0747 putative hemin-binding lipoprotein	Extracellular solute-binding protein, family 5 precursor	OppA oligopeptide-binding protein	Oligopeptide-binding protein	Extracellular solute-binding protein family 5 precursor	D-ala-D-a la transporter subunit; periplasmic- binding component of ABC superfamily	Putative ABC transporter periplasmic-binding protein yddS	Extracellular solute-binding protein family 5 precursor	Putative ABC transporter periplasmic-binding protein yddS	Oligopeptide transport system binding protein precursor	Putative uncharacterized protein	Oligopeptide transport system binding protein precursor	Putative ABC transporter periplasmic-binding protein yddS	Putative ABC transporter periplasmic-binding protein yddS	Peptide ABC transporter substrate binding component	D-ala-D-a la transporter subunit ; periplasmic- binding component of ABC superfamily	D-ala-D-a la transporter subunit ; periplasmic- binding component of ABC superfamily	D-ala-D-a la transporter subunit ; periplasmic- binding component of ABC superfamily	
ECOLI01442	D-alanyl-D-alanine dipeptidase	D-alanyl-D-alanine dipeptidase	D-alanyl-D-alanine dipeptidase	D-alanyl-D-alanine dipeptidase	D-alanyl-D-alanine dipeptidase	Putative D-alanyl-D-alanine dipeptidase	Aad protein	D-alanyl-D-alanine dipeptidase	probable peptidase	D-alanyl-D-alanine dipeptidase	Putative uncharacterized protein	D-alanyl-D-alanine dipeptidase	SC66T3.07, probable D-alanine:D-alanine dipeptidase, len: 202 aa; highly similar to e.g. vanXst (EMBL:AF039028) Streptomyces toyocaensis D-ala-D-ala dipeptidase (208 aa), fasta scores; opt: 1137 z-score: 1354.4 E(): 0, 77.6% identity in 201 aa overlap. Also similar to e.g. SW:VANX_ENTF (EMBL:U35369), vanXB, Enterococcus faecalis D-alanyl-D-alanine dipeptidase (202 aa) (63.9% identity in 202 aa overlap) putative D-alanine:D-alanine dipeptidase	Similar to periplasmic dipeptidase for D-ala-D-ala dipeptidase hypothetical protein	conserved gene D-alanyl-D-alanine dipeptidase	Similar to periplasmic dipeptidase for D-ala-D-ala dipeptidase hypothetical protein	D-alanyl-D-alanine dipeptidase	Probable d-alanyl-d-alanine dipeptidase	LpqR	PROBABLE CONSERVED LIPOPROTEIN LPQR	Mb0861, lpqR, len: 258 aa. Equivalent to Rv0838, len: 256 aa, from Mycobacterium tuberculosis strain H37Rv, (99.2% identity in 258 aa overlap). Probable lpqR, conserved lipoprotein. Similar (except in N-terminus) to hypothetical proteins and D-alanyl-D-alanine dipeptidases e.g. NP_416005.1|NC_000913 hypothetical protein from Escherichia coli strain K12 (193 aa); NP_421076.1|NC_002696 D-alanyl-D-alanine dipeptidase from Caulobacter crescentus (212 aa); Q06241|VANX_ENTFC D-ALANYL-D-ALANINE DIPEPTIDASE from Enterococcus faecium (202 aa), FASTA scores: opt: 198, E(): 1.9e-05, (28.1% identity in 199 aa overlap); etc. Contains signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site.  REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, a 6bp insertion (*-cggccc) leads to a slightly longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (258 aa versus 256 aa). PROBABLE CONSERVED LIPOPROTEIN LPQR	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark D-alanyl-D-alanine dipeptidase	IPR000755: D-ala-D-ala dipeptidase Periplasmic dipeptidase for D-ala-D-ala digestion in peptidoglycan	similar to Salmonella typhi Ty2 D-alanyl-D-alanine dipeptidase D-alanyl-D-alanine dipeptidase	Putative uncharacterized protein	D-alanyl-D-alanine dipeptidase	D-alanyl-D-alanine dipeptidase	Similar to Bacteroides thetaiotaomicron D-alanyl-d-alanine dipeptidase BT3007 SWALL:Q8A3E7 (EMBL:AE016938) (292 aa) fasta scores: E(): 1.8e-56, 70.73% id in 205 aa, and to Porphyromonas gingivalis W83 D-alanyl-d-alanine dipeptidase PG1654 SWALL:AAQ66673 (EMBL:AE017177) (207 aa) fasta scores: E(): 2.5e-29, 43.75% id in 192 aa putative D-Ala-D-Ala dipeptidase protein	Periplasmic dipeptidase	
ECOLI01443	Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase,	Sensory box/GGDEF family protein	Slr0359 protein	C-di-GMP phosphodiesterase A	GGDEF family protein	Alr3170 protein	Putative uncharacterized protein MLCB2052.39	Putative uncharacterized protein	GGDEF FAMILY PROTEIN	Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS and GAF domains	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark c-di-GMP phosphodiesterase A	C-di-GMP phosphodiesterase A	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	c-di-GMP phosphodiesterase A	Code: T; COG: COG2202 putative enzyme	Signal transduction protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 12673057; Product type f : factor putative GGDEF sensory box protein	multisensor diguanylate cyclase/phosphodiesterase	Code: T; COG: COG2202 putative enzyme	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)	putative methyl-accepting chemotaxis protein similarity:fasta; SWALL:O68016 (EMBL:AF010180); Agrobacterium tumefaciens; McpA; length 579 aa; id=81.81; ungapped id=81.81; E()=1.9e-159; 572 aa overlap; query 3-574 aa; subject 1-572 aa similarity:fasta; SWALL:Q8U611 (EMBL:AE009432); Agrobacterium tumefaciens; methyl-accepting chemotaxis protein; mcpA; length 584 aa; id=81.99; ungapped id=81.99; E()=1.1e-159; 572 aa overlap; query 3-574 aa; subject 6-577 aa	putative c-di-GMP phosphodiesterase or signal transduction protein	Putative uncharacterized protein	diguanylate cyclase/phosphodiesterase	c-di-GMP phosphodiesterase A identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	
ECOLI01444	Diguanylate cyclase yddV	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Diguanylate cyclase yddV	Residues 1 to 357 of 381 are 98 pct identical to residues 1 to 357 of a 460 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287665.1 orf, conserved hypothetical protein	Code: T; COG: COG2199 conserved hypothetical protein	putative signaling protein	Diguanylate cyclase	diguanylate cyclase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein KEGG: bbr:BB1960 hypothetical protein	GGDEF family protein GGDEF family protein, Conserved hypothetical protein	GGDEF domain protein	conserved hypothetical protein	diguanylate cyclase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein KEGG: bbr:BB1960 hypothetical protein	Diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase	Putative signalling protein, GGDEF family	Putative GGDEF family signalling protein	Predicted diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase	Putative uncharacterized protein	Putative ggdef family protein	Putative diguanylate cyclase	
ECOLI01445	Uncharacterized lipoprotein yddW	Putative secreted protein	All2116 protein	FenI	Putative uncharacterized protein yngK	Putative lipoprotein	Hypothetical lipoprotein yddW precursor	identified by match to protein family HMM PF02638 conserved hypothetical protein	similar to SP:P22638, and PID:142020; identified by sequence similarity; putative conserved hypothetical protein	Putative lipoprotein	FenI protein	Hypothetical Cytosolic Protein	UPF0748 lipoprotein yddW	SCI35.12c, putative secreted protein, len: 414 aa; similar to hypothetical proteins from several organisms e.g. E. coli TR:P76130 (EMBL:AE000246) (439 aa), fasta scores; opt: 879 z-score: 1103.6 E(): 0, 39.6% identity in 407 aa overlap. Contains possible N-terminal region signal peptide sequence putative secreted protein	Residues 1 to 439 of 439 are 100 pct identical to residues 1 to 439 of a 439 aa protein from Escherichia coli O157:H7 ref: NP_310123.1 orf, conserved hypothetical protein	Putative lipoprotein	Hypothetical twin-arginine translocation pathway signal harboring protein;	conserved protein YngK	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	similar to BR1354, conserved hypothetical protein conserved hypothetical protein	Putative lipoprotein	conserved hypothetical protein	conserved hypothetical protein	identified by match to protein family HMM PF02638 YngK protein	Protein of unknown function DUF187	FenI protein	Code: S; COG: COG1649 conserved hypothetical protein	Protein of unknown function DUF187	Code: S; COG: COG1649 conserved hypothetical protein	
ECOLI01446	Probable glutamate/gamma-aminobutyrate antiporter	Probable glutamate/gamma-aminobutyrate antiporter	Putative amino acid transporter	Probable glutamate/gamma-aminobutyrate antiporter	Putative uncharacterized protein	Lin2462 protein	Residues 1 to 487 of 487 are 100 pct identical to residues 25 to 511 of a 511 aa protein from Escherichia coli K12 ref: NP_416009.1 acid sensitivity protein, putative transporter	GadC COG0531 Amino acid transporters glutamategamma-aminobutyrate antiporter	Glutamate/gamma-aminobutyrate antiporter	identified by match to protein family HMM PF00324; match to protein family HMM TIGR00910 amino acid antiporter	Similar to Q8A4M6 glutamate/gamma-aminobutyrate anti-porter from Bacteroides thetaiotaomicron. FASTA: opt: 911 Z-score: 1001.3 E(): 6.4e-48 Smith-Waterman score: 911; 31.696identity in 448 aa overlap. Glutamate/gamma-aminobutyrate anti-porter	putative transporter; Code: E; COG: COG0531 acid sensitivity protein	Code: E; COG: COG0531 acid sensitivity protein, putative transporter	Code: E; COG: COG0531 acid sensitivity protein, putative transporter	Amino acid antiporter	amino acid antiporter (acid resistance)-like protein lin2462 identified by match to protein family HMM PF00324	Amino acid permease-associated region	Glutamate/gamma-aminobutyrate anti-porter Similar to Q8A4M6 glutamate/gamma-aminobutyrate anti-porter from Bacteroides thetaiotaomicron. FASTA: opt: 911 Z-score: 1001.3 E(): 6.4e-48 Smith-Waterman score: 911; 31.696identity in 448 aa overlap.	Amino acid antiporter	Glutamate gamma-aminobutyrate antiporter	Glutamate gamma-aminobutyrate antiporter	Glutamate gamma-aminobutyrate antiporter	Putative glutamate/gamma-aminobutyrate antiporter	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: mmc:Mmcs_1999 amino acid permease-associated region	Hypothetical protein	acid sensitivity protein, putative transporter Code: E; COG: COG0531	amino acid transporter	Amino acid permease superfamily protein	
ECOLI01447	Glutamate decarboxylase beta	Glutamate decarboxylase beta	Glutamate decarboxylase beta	Code: E; COG: COG0076 glutamate decarboxylase isozyme	Code: E; COG: COG0076 glutamate decarboxylase isozyme	Glutamate decarboxylase beta	Glutamate decarboxylase GadB	Glutamate decarboxylase B, PLP-dependent	Glutamate decarboxylase GadB	Glutamate decarboxylase	Glutamate decarboxylase GadA	Glutamate decarboxylase isozyme	Glutamate decarboxylase B, PLP-dependent	Glutamate decarboxylase B, PLP-dependent	Glutamate decarboxylase B, PLP-dependent	GadB protein	Glutamate decarboxylase B, PLP-dependent	Glutamate decarboxylase B, PLP-dependent	glutamate decarboxylase B, PLP-dependent	Glutamate decarboxylase	
ECOLI01448	Probable zinc protease pqqL	Probable zinc protease pqqL	Putative zinc protease	Peptidase, M16 family	PqqL	Putative zinc protease	hypothetical Zn-dependent peptidases	Zinc protease, putative	Probable zinc protease pqqL	Zinc protease, insulinase family	Peptidase, M16 family	Putative zinc protease	Peptidase, M16 family	Putative zinc protease, insulinase family	Putative peptidase	Predicted Zn-dependent peptidase	Residues 60 to 639 of 643 are 98 pct identical to residues 69 to 648 of a 931 aa protein from Escherichia coli K12 ref: NP_416011.1 putative peptidase	Processing protease protein	Zinc protease, putative	zinc protease	Similar to: HI1368, PQQL_HAEIN probable zinc protease	Similar to Escherichia coli probable zinc protease PqqL or B1494 SWALL:PQQL_ECOLI (SWALL:P31828) (931 aa) fasta scores: E(): 1.5e-56, 26.75% id in 927 aa, and to Bacteroides thetaiotaomicron putative zinc protease BT4320 SWALL:AAO79425 (EMBL:AE016944) (946 aa) fasta scores: E(): 2.4e-217, 60.31% id in 945 aa, and to Porphyromonas gingivalis immunoreactive 106 kDa antigen PG115 SWALL:Q9XBW5 (EMBL:AF153767) (941 aa) fasta scores: E(): 1.2e-160, 47.35% id in 944 aa putative zinc protease	Code: R; COG: COG0612 putative peptidase	Code: R; COG: COG0612 putative peptidase	Peptidase M16-like protein	probable peptidase/protease Similar from codon 42 to Escherichia coli PqqL probable zinc protease (ec 3.4.99.-). UniProt:PQQL_ECOLI (EMBL:ECD791) (931 aa), and entire protein is similar to Caulobacter crescentus peptidase, m16 family.  UniProt:Q9A531_CAUCR (EMBL:AE005932) (976 aa) similarity:fasta; with=UniProt:PQQL_ECOLI (EMBL:ECD791); Escherichia coli.; pqqL; Probable zinc protease pqqL (EC 3.4.99.-).; length=931; id 24.363; 903 aa overlap; query 42-911; subject 12-872 similarity:fasta; with=UniProt:Q9A531_CAUCR (EMBL:AE005932); Caulobacter crescentus.; Peptidase, M16 family.; length=976; id 43.770; 923 aa overlap; query 48-970; subject 49-971	Probable zinc protease PqqL	Peptidase M16 domain protein precursor	Peptidase M16 domain protein precursor	
ECOLI01449	Uncharacterized protein yddB	Putative uncharacterized protein	Hypothetical protein yddB	TonB dependent receptor domain protein	Putative exported protein	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein yddB	Residues 1 to 786 of 786 are 97 pct identical to residues 1 to 790 of a 790 aa protein from Escherichia coli K12 ref: NP_416012.1 orf, conserved hypothetical protein	conserved hypothetical protein	identified by match to protein family HMM PF00593; match to protein family HMM PF07660; match to protein family HMM PF07715 TonB dependent receptor, putative	conserved hypothetical protein	Putative uncharacterized protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yddB	TonB dependent receptor domain protein	Putative exported iron receptor protein precursor	TonB-dependent receptor, plug precursor	conserved hypothetical protein	conserved hypothetical protein	TonB-dependent receptor	TonB-dependent receptor plug precursor	TonB-dependent receptor plug precursor	Predicted porin protein	TonB-dependent receptor	TonB-dependent receptor plug precursor	
ECOLI01450	Inner membrane ABC transporter ATP-binding protein yddA	Putative uncharacterized protein	Putative ABC transporter	Hypothetical ABC transporter ATP-binding protein yddA	Putative ABC transporter ATP-binding protein	Product confidence : putative Gene name confidence : probable putative ABC transporter protein consisting of fused ATP-binding and permease components	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Putative ATP-binding component of a transport system	ABC transporter, ATP-binding protein	similar to Escherichia coli K12 putative ATP-binding component of a transport system gi: 1787772 (562 aa). BLAST with identity of 98% in 562 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Probable atp-binding transport abc transporter protein	ABC-type long-chain fatty acid transport system, fused permease and ATPase components SbmA protein	Similar to Q8Y280 Probable ATP-binding transport ABC transporter protein from Ralstonia solancearum (614 aa).  FASTA: opt: 752 Z-score: 802.5 E(): 8.3e-37 Smith-Waterman score: 752; 29.020 identity in 510 aa overlap. Contains a frameshift after aa 322 and an in-frame stop codon after aa 140 pseudo ABC transporter, ATP-binding protein,pseudogene	identified by match to protein family HMM PF00005 ABC transporter, ATP-binding protein	identified by match to protein family HMM PF00005; match to protein family HMM PF00664 ABC transporter, ATP-binding protein	ABC transporter related	ABC transporter:ABC transporter, N-terminal	Code: R; COG: COG4178 putative ATP-binding component of a transport system	ABC transporter-like	ABC transporter, fused ATPase and inner membrane subunits	putative transmembrane component of ABC transporter similarity:fasta; with=UniProt:Q98DC5 (EMBL:BA000012); Rhizobium loti (Mesorhizobium loti).; ABC transporter,ATP-binding protein. ABC transporter, ATP-binding protein.; length=687; id 73.700; 673 aa overlap; query 1-645; subject 1-673	ABC transporter-like	ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF06472	probable ABC transporter, ATP-binding protein similar to AGR_L_3495p [Agrobacterium tumefaciens] Similar to swissprot:Q8UBF6 Putative location:bacterial inner membrane Psort-Score: 0.3781; go_component: membrane [goid 0016020]; go_function: ATP binding [goid 0005524]; go_function: nucleotide binding [goid 0000166]; go_function: ATP-binding cassette (ABC) transporter activity [goid 0004009]; go_process: transport [goid 0006810]	Hypothetical ABC transporter ATP-binding protein YddA	ABC transporter-like	ABC transporter permease protein	ABC transporter-like	
ECOLI01451	Anaerobic sulfatase-maturating enzyme homolog ydeM	Coenzyme PQQ synthesis protein E	Heme biosynthesis protein	hypothetical coenzyme PQQ synthesis protein	Putative uncharacterized protein	AstB/chuR-related protein	Possible sulfatase regulatory protein	Hypothetical protein ydeM	hypothetical protein	Putative enzyme	Residues 1 to 390 of 390 are 98 pct identical to residues 1 to 390 of a 390 aa protein from Escherichia coli K12 ref: NP_416014.1 putative enzyme	Putative sulfatase modifier protein	conserved hypothetical protein	similar to Salmonella typhi CT18 possible sulfatase regulatory protein possible sulfatase regulatory protein	Putative sulfatase modifier protein	conserved hypothetical protein	Code: R; COG: COG0641 putative enzyme	Code: R; COG: COG0641 putative enzyme	putative arylsulfatase regulatory protein	Radical SAM	Putative uncharacterized protein	Putative sulfatase modifier protein	Putative uncharacterized protein ydeM	probable arylsulfatase regulator identified by match to protein family HMM PF04055	Radical SAM domain protein PFAM: Radical SAM domain protein KEGG: bth:BT0238 transcriptional regulator	Sulfatase modifier protein	Radical SAM domain protein PFAM: Radical SAM domain protein KEGG: gsu:GSU1446 radical SAM domain protein	Radical SAM domain protein	Radical SAM domain protein	
ECOLI01452	Uncharacterized sulfatase ydeN	Arylsulfatase	Putative sulfatase ydeN	Putative sulfatase	Residues 1 to 496 of 496 are 99 pct identical to residues 76 to 571 of a 571 aa protein from Escherichia coli K12 ref: NP_416015.1 putative sulfatase	Putative sulfatase	Putative sulfatase	Similar to Klebsiella pneumoniae arylsulfatase precursor AtsA SWALL:Q9X759 (EMBL:AJ131525) (577 aa) fasta scores: E(): 1.2e-37, 32.13% id in 529 aa, and to Bacteroides thetaiotaomicron arylsulfatase BT4683 SWALL:AAO79788 (EMBL:AE016946) (523 aa) fasta scores: E(): 2.8e-145, 66.93% id in 499 aa, and to Bacteroides thetaiotaomicron arylsulfatase BT3093 SWALL:AAO78199 (EMBL:AE016939) (540 aa) fasta scores: E(): 1.1e-45, 39.32% id in 534 aa putative arylsulfatase precursor	Code: P; COG: COG3119 putative sulfatase	Code: P; COG: COG3119 putative sulfatase	Putative sulfatase YdeN	Putative sulfatase precursor	Putative sulfatase YdeN	sulfatase	Sulfatase precursor	putative sulfatase Code: P; COG: COG3119	Sulfatase precursor	putative sulfatase	Putative secreted sulfatase	Arylsulfatase	Conserved protein	Sulfatase	Sulfatase	Sulfatase precursor	Sulfatase	Sulfatase precursor	Sulfatase precursor	Sulfatase precursor	Sulfatase precursor	
ECOLI01453	HTH-type transcriptional regulator ydeO	HTH-type transcriptional regulator ydeO	HTH-type transcriptional regulator ydeO	Residues 1 to 253 of 253 are 98 pct identical to residues 1 to 253 of a 253 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287656.1 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Hypothetical transcriptional regulator YdeO	Putative ARAC-type regulatory protein	putative ARAC-type regulatory protein Code: K; COG: COG2207	putative ARAC-type regulatory protein	Transcriptional regulator, AraC family	Predicted DNA-binding transcriptional acfivator	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Putative regulator	Putative DNA-binding transcriptional acfivator, AraC-type	Putative DNA-binding transcriptional acfivator, AraC-type	Putative DNA-binding transcriptional acfivator, AraC-type	Putative DNA-binding transcriptional acfivator, AraC-type	Putative DNA-binding transcriptional acfivator, AraC-type	Predicted DNA-binding transcriptional activator	Putative DNA-binding transcriptional acfivator, AraC-type	YdeO protein	Predicted DNA-binding transcriptional acfivator	Predicted DNA-binding transcriptional acfivator	
ECOLI01454	Two-component-system connector protein yneN	Two-component-system connector protein yneN	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Two-component-system connector protein yneN	Two-component-system connector protein yneN	Two-component-system connector protein yneN	Two-component-system connector protein yneN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Two component system connector membrane protein, EvgSA to PhoQP	conserved predicted protein	Putative uncharacterized protein	
ECOLI01455	Protein ydeP	All1061 protein	Anaerobic dehydrogenases, typically selenocysteine-containing	Protein ydeP	PMID: 2941757 PMID: 2211698 PMID: 9036855 best DB hits: BLAST: gb:AAC44462.1; (U60056) CbbBc [Ralstonia eutropha]; E=7e-98 pir:T35749; probable formate dehydrogenase - Streptomyces coelicolor; E=8e-96 pir:A82998; probable oxidoreductase PA5181 [imported] - Pseudomonas; E=7e-93 COG: PA5181; COG0243 Anaerobic dehydrogenases, typically; E=6e-94 MTH1552; COG3383 Uncharacterized anaerobic dehydrogenase; E=9e-45 PH1353; COG0243 Anaerobic dehydrogenases, typically; E=7e-38 PFAM: PF00384; Molybdopterin oxidoreductases; E=2e-36 PF01568; Molydopterin dinucleotide bin; E=1.7e-08 formate dehydrogenase-like protein	probable formate dehydrogenase	Protein ydeP	similar to AX065595-1|CAC26037.1| percent identity: 85 in 757 aa putative formate dehydrogenase	Residues 1 to 759 of 759 are 99 pct identical to residues 1 to 759 of a 759 aa protein from Escherichia coli K12 ref: NP_416018.1 putative oxidoreductase, major subunit	identified by match to protein family HMM PF00384; match to protein family HMM TIGR01701 oxidoreductase alpha (molybdopterin) subunit, fusion	Code: C; COG: COG0243 putative oxidoreductase, major subunit	Code: C; COG: COG0243 putative oxidoreductase, major subunit	Oxidoreductase alpha (molybdopterin) subunit	Code: C; COG: COG0243 putative oxidoreductase, major subunit	Putative uncharacterized protein	Oxidoreductase alpha (Molybdopterin) subunit	histidine kinase	Putative uncharacterized protein ydeP	oxidoreductase alpha (molybdopterin) subunit TIGRFAM: oxidoreductase alpha (molybdopterin) subunit PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region KEGG: nfa:nfa13400 putative formate dehydrogenase	Hypothetical protein	putative oxidoreductase, major subunit Code: C; COG: COG0243	conserved hypothetical protein	Putative formate dehydrogenase	Formate dehydrogenase alpha subunit	Oxidoreductase alpha (Molybdopterin) subunit	Molybdopterin oxidoreductase, alpha subunit	Oxidoreductase alpha (Molybdopterin) subunit	Predicted oxidoreductase	Molybdopterin oxidoreductase, alpha subunit	
ECOLI01456	Uncharacterized fimbrial-like protein ydeQ	Putative adhesin; similar to FimH protein	Residues 1 to 245 of 245 are 99 pct identical to residues 60 to 304 of a 304 aa protein from Escherichia coli K12 ref: NP_416019.1 putative adhesin; similar to FimH protein	similar to FimH protein putative adhesin	similar to FimH protein putative adhesin	Fimbrial protein	Putative Fml fimbrial adhesin FmlD	predicted fimbrial-like adhesin protein	putative Fml fimbrial adhesin FmlD precursor	Protein FimH homolog	Predicted fimbrial-like adhesin protein	Protein FimH homolog	FimH mannose-binding domain protein precursor	Protein FimH homolog	Protein FimH homolog	Putative fimbrial protein	Putative fimbrial-like exported adhesin protein	Putative fimbrial-like exported adhesin protein	Putative fimbrial-like exported adhesin protein	Predicted fimbrial protein-like protein	Putative fimbrial-like exported adhesin protein	YdeQ protein	F9 fimbriae adhesin	Predicted fimbrial-like adhesin protein	predicted fimbrial-like adhesin protein	FimH mannose-binding domain protein	
ECOLI01457	Uncharacterized fimbrial-like protein ydeR	Putative fimbrial-like protein	predicted fimbrial-like adhesin protein	Protein fimG homolog	Predicted fimbrial-like adhesin protein	Protein fimG homolog	Fimbrial protein precursor	Protein FimG homolog	P pilus assembly protein, pilin FimA	Putative fimbrial protein	F17 fimbrial protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Predicted fimbrial protein-like protein	Putative fimbrial-like adhesin exported protein	YdeR protein	Putative F9 fimbriae protein	Predicted fimbrial-like adhesin protein	Fimbrial protein	
ECOLI01458	Uncharacterized fimbrial-like protein ydeS	Putative fimbrial-like protein	predicted fimbrial-like adhesin protein	Fimbrial protein	Fimbrial protein precursor	Protein FimF homolog	Fimbrial protein precursor	Protein FimF homolog	Putative uncharacterized protein	Fimbrial subunit	Putative fimbrial subunit	Protein FimF homolog	Putative fimbrial protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Predicted fimbrial protein-like protein	Putative fimbrial-like adhesin exported protein	YdeS protein	Putative F9 fimbriae protein	Predicted fimbrial-like adhesin protein	predicted fimbrial-like adhesin protein	Fimbrial protein	
ECOLI01459	Putative uncharacterized protein ydet	Residues 9 to 382 of 382 are 34 pct identical to residues 453 to 838 of a 838 aa protein from Escherichia coli gb: AAD44025.2 orf, partial conserved hypothetical protein	hypothetical protein	orf hypothetical protein	Putative truncated fimbrial usher protein	Putative outer membrane fimbrial usher porin precursor	Outer membrane fimbrial usher porin precursor	putative fimbriae usher	Outer membrane fimbrial usher porin precursor	Outer membrane usher protein FimD, truncation	Fimbrial usher family protein	Fimbrial biogenesis outer membrane usher protein	pseudo	Outer membrane usher protein	Putative uncharacterized protein	pseudo	pseudo	Putative uncharacterized protein ydeT	YdeT protein	outer membrane fimbrial usher porin	Outer membrane fimbrial usher porin	
ECOLI01461	Protein hipA	Putative uncharacterized protein	Protein hipA	glimmer prediction match (e-19) to two similar size (45 kDa) proteins in Sinorhizobium sp. NGR234 over entire length conserved hypothetical protein	Putative uncharacterized protein	Persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator	hypothetical protein	HipA-like protein	HipA protein	HipA protein, DNA binding regulator	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark HipA	HipA protein	involved in persistence to inhibition of murein or DNA biosynthesis HipA	HipA protein	HipA-like protein	Putative uncharacterized protein	HipA-like protein	HipA protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	HipA-like	HipA domain protein PFAM: HipA domain protein KEGG: pol:Bpro_0337 HipA-like	Putative HipA-like protein	HipA domain protein PFAM: HipA domain protein KEGG: xom:XOO_4246 HipA protein	HipA domain protein PFAM: HipA domain protein KEGG: eba:ebA1492 hypothetical protein	HipA protein, DNA binding regulator	putative HipA protein. Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8021189; Product type r : regulator	regulator with HipB	HipA domain protein	Putative uncharacterized protein	HipA domain protein	
ECOLI01462	HTH-type transcriptional regulator hipB	Predicted transcriptional regulator	HipB protein	Similar to transcriptional regulator HipB hypothetical protein	transcriptional regulator, MerR family	regulatory protein; Code: K; COG: COG1396 persistence to inhibition of murein or DNA biosynthesis	HTH-type transcriptional regulator HipB	Transciptional regulator	HipB transcriptional activator	Predicted transcriptional regulator	HipB transcriptional activator	Transcriptional regulator, XRE family	Helix-turn-helix domain protein	Putative transcriptional regulator, XRE family	PFAM: helix-turn-helix domain protein KEGG: sdn:Sden_0306 transciptional regulator helix-turn-helix domain protein	Persistence to inhibition of murein or DNA biosynthesis; regulatory protein	Transcriptional regulator, XRE family	Transcriptional regulator HipB	Transcriptional regulator, XRE family	Helix-turn-helix domain protein	DNA-binding transcriptional regulator	Transcriptional regulator HipB	Transcriptional regulator, XRE family	Transcriptional regulator	HTH-type transcriptional regulator HipB	Transcriptional regulator HipB	HTH-type transcriptional regulator HipB	Transcriptional repressor	DNA-binding transcriptional regulator	
ECOLI01463	Uncharacterized protein ydeU	ADHESIN AIDA-I	Putative ATP-binding component of a transport system and adhesin protein	Putaive autotransporter protein	Putative pertactin family virulence factor/autotransporter	Code: MU; COG: COG3468 conserved hypothetical protein	Code: MU; COG: COG3468 putative ATP-binding component of a transport system	Outer membrane autotransporter barrel	Outer membrane autotransporter barrel	Outer membrane autotransporter barrel	Porin, autotransporter (AT) family	Conserved protein	Putative autotransporter protein	Outer membrane autotransporter domain protein	Outer membrane autotransporter barrel domain protein precursor	Outer membrane autotransporter barrel domain protein precursor	Putative autotransporter, IS5K-containing	Putative autotransporter protein	Putative virulence associated protein	Flagellar protein	Putative uncharacterized protein	YdeU protein	Conserved protein	hypothetical protein	Putative uncharacterized protein	
ECOLI01464	Uncharacterized lipoprotein ydeK	Hep_Hag family protein/haemagluttinin motif family protein/YadA-like domain protein	Putative uncharacterized protein ydeK	Surface protein	Uncharacterized PE-PGRS family protein PE_PGRS3	Mb3383c, PPE56d, len: 1219 aa. Equivalent to 3' end of Rv3350c, len: 3716 aa, from Mycobacterium tuberculosis strain H37Rv, (100.000% identity in 1219 aa overlap).  Member of the Mycobacterium tuberculosis PPE family of Gly-, Ala-, Asn-rich proteins, similar to many Mycobacterium tuberculosis proteins from strains H37Rv and CDC1551, e.g. O50378|Rv3347c|MTV004.03c (3157 aa), FASTA scores: opt: 6497, E(): 0, (61.65% identity in 3756 aa overlap); MTCY28_16, MTV050_2, MTY13E10_17, MTCY63_10, MTCY180_1, MTCY63_9, MTV050_1, MTV014_3, MTY13E10_15; etc.  REMARK-M.bovis-M.tuberculosis: In Mycobacterium tuberculosis strain H37Rv, PPE56 exists as a single gene.  In Mycobacterium bovis, 2 frameshifts due to single base transversion (c-a) and a single base deletion (g-*) splits PPE56 into 3 parts, PPE56a, PPE56b and PPE56d. pseudo PPE FAMILY PROTEIN [THIRD PART]	similar to BRA0173, identified by sequence similarity to BRA0173; GB:AAL54311.1; outermembrane transporter contains authentic frame shift resuting in a truncation relative to BRA0173 outermembrane transporter	pseudo	YadA-like protein	Adhesin family protein	outer membrane autotransporter barrel domain TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein PFAM: Autotransporter beta- domain protein KEGG: bur:Bcep18194_B0758 outer membrane autotransporter barrel	Filamentous haemagglutinin family outer membrane protein	serine protease, subtilase family identified by match to protein family HMM PF03797; match to protein family HMM TIGR01414; match to protein family HMM TIGR02601	Putative adhesin	Hypothetical protein SynWH7803_0123	Outer membrane autotransporter barrel domain	Putative outer membrane autotransporter domain protein	Putative uncharacterized protein	Putative haemagglutinin-related protein	Predicted lipoprotein	Outer membrane autotransporter barrel domain protein precursor	Pertactin family protein	Putative uncharacterized protein	Metalloprotease, Hemolysin-type calcium-binding region	Surface protein	Outer membrane autotransporter barrel domain	Filamentous haemagglutinin family outer membrane protein	Outermembrane transporter	
ECOLI01465	Autoinducer 2 kinase lsrK	Autoinducer 2 kinase lsrK	Sugar (Pentulose and hexulose) kinases	Carbohydrate kinase, FGGY family	identified by match to protein family HMM PF00370; match to protein family HMM PF02782 sugar kinase, FGGY family, putative	Product confidence : probable Gene name confidence : hypothetical probable sugar kinase, probably EGGY family protein	Autoinducer 2 kinase lsrK	Autoinducer 2 kinase lsrK	Autoinducer 2 kinase lsrK	putative sugar kinase	similar to Salmonella typhi CT18 putative sugar kinase putative sugar kinase	Autoinducer 2 kinase lsrK	Autoinducer 2 kinase lsrK	sugar kinase	probable sugar kinase, EGGY family protein	Carbohydrate kinase, FGGY	Putative carbohydrate kinase	Sugar kinase, FGGY family	Carbohydrate kinase	Putative carbohydrate kinase	carbohydrate kinase, FGGY PFAM: carbohydrate kinase, FGGY KEGG: rsp:RSP_3506 probable sugar kinase, EGGY family protein	Carbohydrate kinase	carbohydrate kinase, FGGY family	Putative uncharacterized protein	Carbohydrate kinase, FGGY	Putative kinase	Autoinducer-2 kinase	Carbohydrate kinase FGGY	Carbohydrate kinase FGGY	
ECOLI01466	Transcriptional regulator lsrR	Transcriptional regulator lsrR	Putative transcriptional regulator	Transcriptional regulator; possible deoxyribonucleoside regulator	identified by match to protein family HMM PF04198 transcriptional regulator, putative	Transcriptional regulator, putative	Product confidence : putative putative transcriptional regulator protein	Transcriptional regulator lsrR	Transcriptional regulator, contains sigma factor- related N-terminal domain	Residues 1 to 317 of 317 are 99 pct identical to residues 1 to 317 of a 317 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287642.1 putative transcriptional regulator, sorC family	Transcriptional regulator lsrR	SmoC-like regulatory protein	IPR007324: Putative sugar-binding domain putative transcriptional repressor	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	Putative transcriptional repressor	Transcriptional regulator lsrR	transcriptional regulator; possible deoxyribonucleoside regulator	transcriptional regulator, DeoR family	Putative transcriptional repressor	Transcriptional regulator, possible sorbitol operon regulator	transcriptional regulator, putative	Transcriptional repressor	Putative transcriptional regulatory protein	Transcriptional regulator, DeoR family	transcriptional regulator, DeoR family PFAM: putative sugar-binding domain protein KEGG: rsp:RSP_3505 transcriptional regulator, DeoR family	putative transcriptional regulator Code: K; COG: COG2390	Transcriptional repressor	central glycolytic genes regulator	Repressor	
ECOLI01467	Autoinducer 2 import ATP-binding protein lsrA	Autoinducer 2 import ATP-binding protein lsrA	Product confidence : putative Gene name confidence : hypothetical putative sugar ABC transporter ATP-binding protein	Autoinducer 2 import ATP-binding protein lsrA	Residues 1 to 511 of 511 are 98 pct identical to residues 1 to 511 of a 511 aa protein from Escherichia coli K12 ref: NP_416030.1 putative ATP-binding component of a transport system	Autoinducer 2 import ATP-binding protein lsrA	Autoinducer 2 import ATP-binding protein lsrA	similar to Salmonella typhi CT18 putative ABC transporter ATP-binding protein putative ABC transporter ATP-binding protein	Autoinducer 2 import ATP-binding protein lsrA	Autoinducer 2 import ATP-binding protein lsrA	Putative ABC transporter ATP-binding protein	ABC transporter ATP-binding protein	ABC sugar transporter, ATPase subunit	Putative ABC transporter ATP-binding protein	putative ATP-binding component of a transport system Code: G; COG: COG1129	ABC transporter ATP-binding protein	ABC transporter related precursor	Autoinducer-2 ABC transporter, ATP-binding protein LsrA	Fused AI2 transporter subunits of ABC superfamily: ATP-binding components	Autoinducer AI-2 ABC transporter, ATP binding protein	Autoinducer-2 ABC transporter, ATP-binding protein LsrA	ABC transporter related precursor	Autoinducer-2 ABC transporter, ATP-binding protein LsrA	ABC transporter related	Putative uncharacterized protein	ABC transporter related	ABC transporter related	Autoinducer AI-2 ABC transporter, ATP binding protein	Putative ABC transporter ATP-binding protein	
ECOLI01468	Autoinducer 2 import system permease protein lsrC	Putative uncharacterized protein	Autoinducer 2 import system permease protein lsrC	Putative ribose ABC transporter, permease protein	Sugar transport system permease protein	identified by match to protein family HMM PF02653 ribose ABC transporter, permease protein, putative	Product confidence : putative Gene name confidence : hypothetical putative sugar ABC transporter permease protein	Putative ABC transporter membrane-spanning permease	Putative ABC transporter, permease protein	Autoinducer 2 import system permease protein lsrC	Residues 1 to 342 of 342 are 99 pct identical to residues 1 to 342 of a 342 aa protein from Escherichia coli K12 ref: NP_416031.1 putative transport system permease protein	Autoinducer 2 import system permease protein lsrC	Autoinducer 2 import system permease protein lsrC	ABC transporter, permease protein	ABC transporter permease protein	IPR001851: Bacterial inner-membrane translocator putative ABC superfamily (membrane), sugar transport protein	similar to Salmonella typhi CT18 putative ABC transporter permease protein putative ABC transporter permease protein	Autoinducer 2 import system permease protein lsrC	ABC transporter permease protein	best blastp match gb|AAK33914.1| (AE006547) putative ABC transport protein (permease) [Streptococcus pyogenes M1 GAS] putative ABC transport protein (permease)	Autoinducer 2 import system permease protein lsrC	sugar ABC transporter, permease	ABC transporter permease protein	ABC sugar transporter, inner membrane subunit	ABC transporter permease protein	ABC transporter permease protein COG0390 [R] ABC-type uncharacterized transport system, permease component	ABC transporter permease protein	Putative ABC transporter permease protein	Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component	
ECOLI01469	Autoinducer 2 import system permease protein lsrD	Autoinducer 2 import system permease protein lsrD	Putative ribose ABC transporter, permease protein	Sugar transport system permease protein	Sugar ABC transporter, permease	identified by match to protein family HMM PF02653 ribose ABC transporter, permease protein, putative	Autoinducer 2 import system permease protein lsrD	Residues 1 to 330 of 330 are 100 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli K12 ref: NP_416032.1 putative transport system permease protein	Autoinducer 2 import system permease protein lsrD	Autoinducer 2 import system permease protein lsrD	IPR001851: Bacterial inner-membrane translocator putative ABC superfamily (membrane), sugar transport protein	similar to Salmonella typhi CT18 putative ABC transporter, membrane component putative ABC transporter, membrane component	Autoinducer 2 import system permease protein lsrD	Autoinducer 2 import system permease protein lsrD	Putative ABC transporter permease protein	ABC transporter, permease, sugar transport	ABC transporter permease protein	Putative ABC transporter permease protein	putative transport system permease protein Code: G; COG: COG1172	ABC transporter permease protein	sugar ABC transporter, permease	Putative uncharacterized protein	Inner-membrane translocator precursor	Putative ABC transport system permease protein	AI2 transporter; membrane component of ABC superfamily	Autoinducer AI-2 ABC transporter, permease protein LsrD	Autoinducer-2 ABC transporter, permease protein LsrD	Monosaccharide-transporting ATPase	Autoinducer-2 ABC transporter, permease protein LsrD	
ECOLI01470	Autoinducer 2-binding protein lsrB	Putative uncharacterized protein	Autoinducer 2-binding protein lsrB	Putative sugar ABC transporter, sugar-binding protein	Sugar-binding protein	Sugar ABC transporter, sugar-binding protein	sugar ABC transporter, sugar-binding protein, putative	Product confidence : putative Gene name confidence : hypothetical putative sugar ABC transporter periplasmic solute-binding protein precursor	Autoinducer 2-binding protein lsrB	Autoinducer 2-binding protein lsrB	Autoinducer 2-binding protein lsrB	putative ABC superfamily (peri_perm), sugar transport protein	similar to Salmonella typhi CT18 putative ABC transport protein, solute-binding component putative ABC transport protein, solute-binding component	Autoinducer 2-binding protein lsrB	Autoinducer 2-binding protein lsrB	sugar ABC transporter, sugar-binding protein	ABC sugar transporter, periplasmic binding protein	transcriptional regulator, LacI family	putative secreted solute-binding lipoprotein KEGG: sco:SCO0808 putative secreted solute-binding lipoprotein	Putative periplasmic solute-binding protein precursor	Putative sugar ABC transporter, substrate-binding protein precursor	ABC transporter, solute-binding, sugar transport	Periplasmic solute-binding protein precursor	Putative periplasmic solute-binding protein precursor	ABC sugar transporter, periplasmic binding protein KEGG: rsp:RSP_3500 ABC sugar transporter, periplasmic binding protein	Periplasmic solute-binding protein precursor	sugar ABC transporter, sugar-binding protein	Autoinducer-2 (AI-2) kinase	Putative periplasmic solute-binding protein precursor	
ECOLI01471	Uncharacterized aldolase lsrF	Putative uncharacterized protein	Uncharacterized aldolase PM1278	Uncharacterized aldolase lsrF	Putative uncharacterized protein	Fructose-bisphosphate aldolase	Possible fructose-bisphosphate aldolase	identified by match to protein family HMM PF01791 conserved hypothetical protein	Uncharacterized aldolase lsrF	Residues 1 to 256 of 256 are 98 pct identical to residues 36 to 291 of a 291 aa protein from Escherichia coli K12 ref: NP_416034.1 orf, conserved hypothetical protein	Uncharacterized aldolase lsrF	Uncharacterized aldolase lsrF	IPR001064: Beta and gamma crystallin putative fructose-1,6-bisphosphate aldolase	similar to Salmonella typhi CT18 putative aldolase putative aldolase	Uncharacterized aldolase lsrF	Uncharacterized aldolase lsrF	possible fructose-bisphosphate aldolase	conserved hypothetical protein	Code: G; COG: COG1830; orf conserved hypothetical protein	Conserved hypothetical protein	conserved hypothetical protein	deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase: (8.4e-69) KEGG: atc:AGR_L_1940 putative aldolase MTH579, ev=1e-131, 81% identity	Putative aldolase	deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase KEGG: ret:RHE_PB00072 putative aldolase protein	Conserved aldolase	Deoxyribose-phosphate aldolase/phospho-2-dehydro- 3-deoxyheptonate aldolase	deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase KEGG: cch:Cag_1641 hypothetical protein	Fructose-bisphosphate aldolase	Aldolase	
ECOLI01472	Autoinducer 2-degrading protein lsrG	Autoinducer 2-degrading protein lsrG	Hypothetical Cytosolic Protein	identified by match to protein family HMM PF02619; match to protein family HMM PF03992 conserved hypothetical protein	Product confidence : putative Gene name confidence : hypothetical conseved hypothetical protein	Autoinducer 2-degrading protein lsrG	Residues 1 to 96 of 96 are 98 pct identical to residues 1 to 96 of a 96 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287636.1 orf, conserved hypothetical protein	Autoinducer 2-degrading protein lsrG	DUF176	Autoinducer 2-degrading protein lsrG	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Autoinducer 2-degrading protein lsrG	Autoinducer 2-degrading protein lsrG	conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG1359; orf conserved hypothetical protein	Hypothetical protein	Antibiotic biosynthesis monooxygenase	Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase KEGG: mxa:MXAN_2882 antibiotic biosynthesis monooxygenase family protein	Hypothetical protein	Hypothetical protein	Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase KEGG: neu:NE0621 DUF176	antibiotic biosynthesis monooxygenase family protein identified by match to protein family HMM PF03992	Hypothetical protein	Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase KEGG: rsp:RSP_3507 hypothetical protein	conserved hypothetical protein Code: S; COG: COG1359	Hypothetical protein	conserved hypothetical protein	
ECOLI01473	Trans-aconitate 2-methyltransferase	Trans-aconitate 2-methyltransferase	Trans-aconitate 2-methyltransferase	Trans-aconitate 2-methyltransferase	Trans-aconitate 2-methyltransferase	similar to SP:P76145; identified by sequence similarity; putative trans-aconitate methyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE TRANS-ACONITATE METHYLTRANSFERASE PROTEIN	Trans-aconitate 2-methyltransferase	Trans-aconitate 2-methyltransferase	trans-aconitate methyltransferase	Trans-aconitate 2-methyltransferase	SAM-dependent methyltransferase	SCE66.11c, possible trans-aconitate methyltransferase, len: 303 aa; similar to many e.g.  SW:TAM_ECOLI (EMBL:AE000249) trans-aconitate methyltransferase from Escherichia coli (251 aa) fasta scores; opt: 707, z-score: 686.9, E(): 8.8e-31, 43.9% identity in 269 aa overlap. Contains degenerately repetative glycine-rich sequence at the C-terminus. putative trans-aconitate methyltransferase	Residues 1 to 252 of 252 are 98 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287635.1 putative enzyme	Trans-aconitate 2-methyltransferase	Probable trans-aconitate 2-methyltransferase	Mb0302, tam, len: 261 aa. Equivalent to Rv0294, len: 261 aa, from Mycobacterium tuberculosis strain H37Rv (100.0% identity in 261 aa overlap). Probable tam, trans-aconitate methyltransferase (EC 2.1.1.-), similar to others e.g. P76145|TAM_ECOLI|7465793|B64906|B1519 TRANS-ACONITATE METHYLTRANSFERASE from Escherichia coli strain K12 (252 aa), FASTA scores: opt: 649, E(): 0, (39.3 identity in 252 aa overlap). BELONGS TO THE METHYLTRANSFERASE SUPERFAMILY. PROBABLE TRANS-ACONITATE METHYLTRANSFERASE TAM	S-adenosylmethionine (SAM)-dependent methyltransferase	Trans-aconitate 2-methyltransferase	Putative methyltransferase	trans-aconitate methyltransferase	SAM (and some other nucleotide) binding motif	conserved hypothetical protein	trans-aconitate 2-methyltransferase	Trans-aconitate 2-methyltransferase	Code: R; COG: COG4106 putative enzyme	Trans-aconitate 2-methyltransferase	Trans-aconitate 2-methyltransferase	Trans-aconitate 2-methyltransferase	
ECOLI01474	UPF0187 protein yneE	UPF0187 protein yneE	Putative membrane protein	Hypothetical transmembrane ptotein yneE	Hypothetical protein yneE	Putative membrane protein	Putative membrane protein	Conserved effector locus protein	Putative membrane protein	Putative uncharacterized protein	UPF0187 protein yneE	hypothetical protein, probable membrane protein	Putative uncharacterized protein	Residues 1 to 321 of 321 are 99 pct identical to residues 1 to 321 of a 321 aa protein from Escherichia coli K12 ref: NP_416037.1 orf, conserved hypothetical protein	UPF0187 protein RSc3414	Probable transmembrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative membrane protein	Putative uncharacterized protein	UPF0187 protein yneE	Protein of unknown function UPF0187	Protein of unknown function UPF0187	conserved hypothetical protein identified by match to protein family HMM PF05249	putative membrane protein	Protein of unknown function UPF0187	protein of unknown function UPF0187	Code: S; COG: COG3781; orf conserved hypothetical protein	Putative uncharacterized protein	
ECOLI01475	Altronate oxidoreductase	Altronate oxidoreductase	Hypothetical altronate oxidoreductase	Altronate oxidoreductase	Altronate oxidoreductase	Altronate oxidoreductase	Residues 1 to 483 of 483 are 99 pct identical to residues 1 to 483 of a 483 aa protein from Escherichia coli O157:H7 ref: NP_310155.1 altronate oxidoreductase	Altronate oxidoreductase	D-mannonate oxidoreductase protein	InterProMatches:IPR008927 tagaturonate reductase (altronate oxidoreductase)	altronate oxidoreductase	Altronate oxidoreductase	Mannitol-1-phosphate/altronate dehydrogenases MtlD protein	Code: G; COG: COG0246 altronate oxidoreductase	COG0246, MtlD, Mannitol-1-phosphate/altronate dehydrogenases pfam01232, Mannitol_dh, Mannitol dehydrogenase Putative altronate dehydrogenase	Mannitol dehydrogenase-like	Altronate oxidoreductase	Altronate oxidoreductase	Altronate oxidoreductase	altronate oxidoreductase	Mannitol dehydrogenase, C-terminal domain PFAM: Mannitol dehydrogenase, C-terminal domain KEGG: atc:AGR_C_5101 altronate oxidoreductase	Altronate oxidoreductase	Mannitol dehydrogenase, C-terminal domain	Mannitol dehydrogenase, C-terminal domain PFAM: Mannitol dehydrogenase, C-terminal domain KEGG: bcn:Bcen_6468 mannitol dehydrogenase-like	Altronate oxidoreductase	Mannitol dehydrogenase, C-terminal domain PFAM: Mannitol dehydrogenase, C-terminal domain KEGG: rsp:RSP_1609 putative altronate dehydrogenase	altronate oxidoreductase Code: G; COG: COG0246	Altronate oxidoreductase	altronate oxidoreductase	
ECOLI01476	Uncharacterized protein yneF	GGDEF family protein	Hypothetical protein yneF	GGDEF domain protein	GGDEF domain protein	Uncharacterized protein yneF	hypothetical protein	GGDEF family protein	Residues 158 to 472 of 472 are 98 pct identical to residues 1 to 315 of a 315 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287632.1 orf, conserved hypothetical protein	Putative signal transduction ggdef domain transmembrane protein	regulatory protein (GGDEF domain) hypothetical protein	conserved gene sensory box/GGDEF/EAL family	GGDEF domain protein	Code: T; COG: COG2199 conserved hypothetical protein	diguanylate cyclase (GGDEF domain)	putative transmembrane GGDEF sensory box protein similarity:fasta; with=UniProt:Q8RPY0_RHILV (EMBL:AF347070); Rhizobium leguminosarum (biovar viciae).; Hypothetical protein.; length=287; id 95.470; 287 aa overlap; query 1-287; subject 1-287	Putative diguanylate cyclase (GGDEF domain)	diguanylate cyclase	diguanylate cyclase TIGRFAM: GGDEF domain: (3.3e-26) PFAM: GGDEF: (1.5e-35) KEGG: rru:Rru_A3391 putative diguanylate cyclase (GGDEF domain), ev=8e-25, 34% identity	probable urease-associated protein similar to orf9 (AF347070.1:5872..6735) [Rhizobium leguminosarum bv. viciae] Similar to entrez-protein:AAL83832.1 Putative location:bacterial inner membrane Psort-Score: 0.4291; go_function: molecular_function unknown [goid 0005554]	Putative uncharacterized protein	diguanylate cyclase	Hypothetical protein	response regulator receiver domain protein (CheY-like)	Diguanylate cyclase	GGDEF domain protein	Diguanylate cyclase	Putative uncharacterized protein yneF	diguanylate cyclase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein KEGG: bur:Bcep18194_A6515 diguanylate cyclase (GGDEF domain)	
ECOLI01477	Uncharacterized protein yneG	Putative cytoplasmic protein	Putative uncharacterized protein	Hypothetical protein yneG	Putative uncharacterized protein	Residues 1 to 114 of 114 are 100 pct identical to residues 1 to 114 of a 119 aa protein from Escherichia coli K12 ref: NP_416040.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	conserved hypothetical protein	Putative cytoplasmic protein	Hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein yneG	hypothetical protein KEGG: zmo:ZMO1010 hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative uncharacterized protein yneG	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	
ECOLI01478	Glutaminase 2	Glutaminase	Glutaminase	Glutaminase	Glutaminase	Glutaminase	Glutaminase 1	Glutaminase	Thermolabile glutaminase	putative glutaminase family protein	Glutaminase 2	Glutaminase	Glutaminase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLUTAMINASE A PROTEIN	Glutaminase	glutaminase	Glutaminase A	Glutaminase	Glutaminase 2	glutaminase A	Glutaminase	Glutaminase 1	SC4G1.15, probable glutaminase, len: 307 aa; similar to TR:O87405 (EMBL:AF057158) Rhizobium etli glutaminase A, 309 aa; fasta scores: opt: 990 z-score: 1158.2 E(): 0; 52.3% identity in 304 aa overlap and to middle part of SW:GLSK_RAT (EMBL:M65150) Rattus norvegicus glutaminase, kidney isoform precursor (EC 3.5.1.2) GlsK, 647 aa; fasta scores: opt: 577 z-score: 672.7 E(): 5.3e-30; 35.2% identity in 293 aa overlap putative glutaminase	Glutaminase	Residues 1 to 308 of 308 are 99 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287629.1 putative glutaminase	Glutaminase 1	Glutaminase	Glutaminase	similar to glutaminase hypothetical protein	
ECOLI01479	Aldehyde dehydrogenase-like protein yneI	Aldehyde dehydrogenase	Putative aldehyde-dehydrogenase	Aldehyde-dehydrogenase like protein yneI	Aldehyde dehydrogenase family protein	Putative aldehyde dehydrogenase	2SCG58.04, probable aldehyde dehydrogenase, len: 461 aa; similar to SW:GABD_ECOLI (EMBL:M88334) Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) GabD, 482 aa; fasta scores: opt: 1006 z-score: 1146.9 E(): 0; 36.5% identity in 455 aa overlap. Contains Pfam match to entry PF00171 aldedh, Aldehyde dehydrogenase family putative aldehyde dehydrogenase	conserved gene succinate semialdehyde dehyrogenase (NADP+)	similar to aldehyde dehydrogenase hypothetical protein	Mb0239c, gabD1, len: 511 aa. Equivalent to Rv0234c, len: 511 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 511 aa overlap). Probable gabD1, succinate-semialdehyde dehydrogenase [NADP+] dependent (EC 1.2.1.16), equivalent to AL022486|MLCB1883_6 PROBABLE ALDEHYDE DEHYDROGENASE from Mycobacterium leprae (457 aa), FASTA scores: opt: 2617, E(): 0, (85.7% identity in 455 aa overlap). Also highly similar to Q55585|GABD|SLR0370 PROBABLE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE from Synechocystis sp. strain PCC 6803 (454 aa), FASTA scores: opt: 1676, E(): 0, (55.8% identity in 455 aa overlap); and similar to others e.g. GABD_ECOLI|P25526 succinate-semialdehyde dehydrogenase from Escherichia coli (482 aa), FASTA scores: opt: 929, E(): 0, (36.5% identity in 452 aa overlap); etc. Note that similar to other cytosolic aldehyde dehydrogenases with EC number: 1.2.1.3.  Also similar to Rv0768|aldA semialdehyde dehydrogenase from Mycobacterium tuberculosis (489 aa); and gabD2|Rv1731|MTCY04C12.16 POSSIBLE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE [NADP+] DEPENDANT from Mycobacterium tuberculosis (518 aa). Contains PS00070 aldehyde dehydrogenases cysteine active site. BELONGS TO THE ALDEHYDE DEHYDROGENASES FAMILY. Could start at different site by homology. Note that previously known as gabD2. PROBABLE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE [NADP+] DEPENDANT (SSDH) GABD1	IPR002086: Aldehyde dehydrogenase putative succinate-semialdehyde dehydrogenase	similar to Salmonella typhi CT18 putative aldehyde-dehydrogenase putative aldehyde-dehydrogenase	Aldehyde dehydrogenase family protein	Putative succinate-semialdehyde dehydrogenase	identified by match to protein family HMM PF00171 aldehyde dehydrogenase family protein	identified by similarity to SP:P76149; match to protein family HMM PF00171 aldehyde dehydrogenase family protein	Aldehyde dehydrogenase	Code: C; COG: COG1012 putative aldehyde dehydrogenase	Code: C; COG: COG1012 putative aldehyde dehydrogenase	aldehyde dehydrogenase	Aldehyde dehydrogenase	Code: C; COG: COG1012 putative aldehyde dehydrogenase	Aldehyde-dehydrogenase like proteinYneI	aldehyde dehydrogenase (succinate-semialdehyde dehydrogenase homolog)	aldehyde dehydrogenase family protein	Aldehyde-dehydrogenase like protein YneI	aldehyde dehydrogenase PFAM: aldehyde dehydrogenase KEGG: sma:SAV7134 putative aldehyde dehydrogenase	aldehyde dehydrogenase family protein identified by match to protein family HMM PF00171	putative aldehyde dehydrogenase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	
ECOLI01480	Uncharacterized HTH-type transcriptional regulator yneJ	Transcriptional regulator, LysR family	Probable transcriptional regulator	Transcriptional regulators, LysR family	Transcriptional regulator, LysR family	Hypothetical transcriptional regulator yneJ	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative transcriptional regulator LYSR-type	Transcriptional regulator protein	transcriptional regulator, LysR family	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	Transcriptional regulator, LysR family	Putative LysR family transcriptional regulator	LysR family Transcriptional regulator	identified by similarity to SP:P94501; match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	transcriptional regulator, LysR family	hypothetical protein, similar to LysR-gltR family transcription regulator	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	identified by match to protein family HMM PF00126; match to protein family HMM PF03466; match to protein family HMM TIGR01199 transcriptional regulator, LysR family	regulatory protein, LysR:LysR, substrate-binding	regulatory protein, LysR:LysR, substrate-binding	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Putative transcriptional regulator LysR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	LysR-family transcriptional regulator	Transcriptional Regulator, LysR family	Transcriptional regulator COG0583	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	
ECOLI01481	Uncharacterized protein yneK	Residues 1 to 371 of 371 are 96 pct identical to residues 1 to 371 of a 371 aa protein from Escherichia coli K12 ref: NP_416044.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yneK	Putative uncharacterized protein yneK	pseudo	YneK protein	Predicted protein	Putative uncharacterized protein	
ECOLI01482	Sugar efflux transporter	Probable sugar efflux transporter	Probable sugar efflux transporter	Probable sugar efflux transporter	Probable sugar efflux transporter	MFS family protein	Probable sugar efflux transporter	Probable sugar efflux transporter	Probable sugar efflux transporter	Probable sugar efflux transporter	Probable sugar efflux transporter	Residues 1 to 362 of 362 are 99 pct identical to residues 1 to 362 of a 396 aa protein from Escherichia coli K12 ref: NP_416045.1 putative resistance - regulatory protein	General substrate transporters	IPR007114: Major facilitator superfamily MFS family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein, contributes to control of arabinose regulon	similar to Salmonella typhi CT18 putative membrane transport protein putative membrane transport protein	Probable sugar efflux transporter	identified by match to PFAM protein family HMM PF00083 major facilitator family protein	Similar to: HI0135, SOTB_HAEIN probable sugar efflux transporter	Arabinose efflux permease AraJ protein	Probable sugar efflux transporter	Weakly similar to Streptomyces coelicolor putative integral membrane transport protein SCO0079 or SCJ11.08c SWALL:Q9RI96 (EMBL:AL109949) (407 aa) fasta scores: E(): 2.3e-19, 26.37% id in 364 aa putative integral membrane protein	Probable sugar efflux transporter	identified by match to protein family HMM PF07690 major facilitator family transporter	identified by match to protein family HMM PF07690 major facilitator family transporter	General substrate transporter:Major facilitator superfamily	identified by match to protein family HMM PF07690 major facilitator family protein	Code: G; COG: COG2814 putative resistance/regulatory protein	Code: G; COG: COG2814 putative resistance/regulatory protein	major facilitator superfamily MFS_1	
ECOLI01483	UPF0056 inner membrane protein marC	Putative MarC family integral membrane protein	UPF0056 inner membrane protein marC	Multiple antibiotic resistance protein marC	Putative multiple antibiotic resistance protein	Multiple antibiotic resistance protein	Putative multiple antibiotic resistance protein	hypothetical protein	UPF0056 inner membrane protein marC	Residues 1 to 221 of 221 are 100 pct identical to residues 1 to 221 of a 221 aa protein from Escherichia coli K12 ref: NP_416046.1 orf, conserved hypothetical protein	Multiple antibiotic resistance protein	YdeB protein	Probable multiple antibiotic resistance protein marC	identified by match to protein family HMM PF01914 integral membrane protein, MarC family	putative MarC Transporter, multiple antibiotic resistance protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Multiple antibiotic resistance protein	UPF0056 inner membrane protein marC	Code: U; COG: COG2095 conserved hypothetical protein	Code: U; COG: COG2095 conserved hypothetical protein	multiple antibiotic resistance protein	Code: U; COG: COG2095; orf conserved hypothetical protein	Multiple antibiotic resistance (MarC)-related proteins	UPF0056 inner membrane protein marC	Multiple antibiotic resistance protein precursor	UPF0056 inner membrane protein marC	multiple antibiotic resistance protein	membrane protein, MarC family identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427	Multiple antibiotic resistance protein precursor	
ECOLI01484	Multiple antibiotic resistance protein marR	Transcriptional regulator, MarR family	Probable transcriptional regulator	Transcriptional regulator, MarR family	Multiple antibiotic resistance protein marR	MarR family protein	Multiple antibiotic resistance protein marR	Transcriptional regulator, MarR family	Multiple antibiotic resistance protein MarR, putative	Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Multiple antibiotic resistance protein; repressor of mar operon	regulatory protein (MarR-family)	Residues 1 to 144 of 144 are 98 pct identical to residues 1 to 144 of a 144 aa protein from Escherichia coli gb: AAK21292.1 MarR	Probable transcriptional regulator, MarR family	MarR family; Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355) repressor of ohrA-OhrR	IPR000345: Cytochrome c heme-binding site; IPR000835: Bacterial regulatory protein, MarR family transcriptional repressor of marRAB operon, multiple antibiotic resistance protein	similar to Salmonella typhi CT18 multiple antibiotic resistance protein MarR multiple antibiotic resistance protein MarR	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pr : putative regulator putative transcriptional regulator	COG1846 MarR family transcriptional regulator	Transcriptional regulator EmrR, putative	Multiple antibiotic resistance protein marR	identified by similarity to SP:P27245; match to protein family HMM PF01047 multiple antibiotic resistance operon repressor MarR	identified by similarity to SP:P27245; match to protein family HMM PF01047 transcriptional regulator, MarR family	regulatory protein, MarR	regulatory protein, MarR	repressor of mar operon; Code: K; COG: COG1846 multiple antibiotic resistance protein	repressor of mar operon; Code: K; COG: COG1846 multiple antibiotic resistance protein	Transcriptional Regulator, MarR family	
ECOLI01485	Multiple antibiotic resistance protein marA	Multiple antibiotic resistance protein marA	Multiple antibiotic resistance protein marA	Multiple antibiotic resistance protein marA	probable transcriptional regulator	Residues 4 to 146 of 147 are 93 pct identical to residues 1 to 143 of a 144 aa protein from Salmonella enterica subsp. enterica serovar Typhi ref: NP_455961.1 multiple antibiotic resistance protein MarA	IPR000005: Helix-turn-helix, AraC type transcriptional activator of defense systems (AraC/XylS family), multiple antibiotic resistance protein	similar to Salmonella typhi CT18 multiple antibiotic resistance protein MarA multiple antibiotic resistance protein MarA	identified by match to protein family HMM PF00165 transcriptional regulator, AraC family	Multiple antibiotic resistance protein marA	multiple antibiotic resistance; Code: K; COG: COG2207 transcriptional activator of defense systems	transcriptional activator of defense systems; Code: K; COG: COG2207 multiple antibiotic resistance protein	multiple antibiotic resistance; transcriptional activator of defense systems; Code: K; COG: COG2207 MarA	Multiple antibiotic resistance protein MarA	Multiple antibiotic resistance protein MarA	multiple antibiotic resistance Code: K; COG: COG2207	Multiple antibiotic resistance protein MarA	Transcriptional regulator, AraC family	Multiple antibiotic resistance; transcriptional activator of defense systems	Putative uncharacterized protein	Multiple antibiotic resistance protein MarA	DNA-binding transcriptional dual activator of multiple antibiotic resistance	Transcriptional regulator, AraC family	Multiple antibiotic resistance protein MarA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Multiple antibiotic resistance protein MarA	Putative transcriptional regulator	
ECOLI01486	Multiple antibiotic resistance protein marB	Multiple antibiotic resistance protein marB	Multiple antibiotic resistance protein	Residues 1 to 72 of 72 are 98 pct identical to residues 1 to 72 of a 72 aa protein from Shigella flexneri gb: AAL06494.1 MarB	multiple antibiotic resistance protein	Multiple antibiotic resistance protein marB	multiple antibiotic resistance protein	multiple antibiotic resistance protein	Multiple antibiotic resistance protein MarB	Multiple antibiotic resistance protein MarB	multiple antibiotic resistance protein	Multiple antibiotic resistance protein MarB precursor	Multiple antibiotic resistance protein	Multiple antibiotic resistance protein MarB	Predicted protein	Multiple antibiotic resistance protein precursor	Multiple antibiotic resistance protein MarB	Putative uncharacterized protein	Putative uncharacterized protein	Multiple antibiotic resistance protein MarB	Conserved domain protein	Multiple antibiotic resistance protein	Conserved domain protein	Multiple antibiotic resistance protein MarB	Multiple antibiotic resistance protein MarB	Conserved domain protein	Multiple antibiotic resistance protein MarB	Conserved domain protein	Multiple antibiotic resistance protein MarB	
ECOLI01487	Probable amino-acid metabolite efflux pump	Putative uncharacterized protein	Putative uncharacterized protein PH0070	Putative uncharacterized protein PF2043	Putative uncharacterized protein	Putative membrane protein	Putative permease protein	Probable transmembrane protein	Probable amino acid metabolite efflux pump	Putative uncharacterized protein	Membrane protein, putative	Putative uncharacterized protein ydeD	Permeases of the drug/metabolite transporter (DMT) superfamily	SCC57A.27c, integral membrane protein, len: 311 aa.  Similar to many proteins of undefined function including: Deinococcus radiodurans TR:AAF09725(EMBL:AE001876) conserved hypothetical protein (325 aa), fasta scores opt: 713 z-score: 803.2 E(): 0 41.8% identity in 280 aa overlap and Bacillus subtilis SW:YOAV_BACSU(EMBL:AF027868) hypothetical 33.0 KD protein (292 aa), fasta scores opt: 355 z-score: 404.7 E(): 3.8e-15 26.3% identity in 297 aa overlap. Contains 2xPfam matches to entry PF00892 DUF6, Integral membrane protein. integral membrane protein.	Residues 8 to 306 of 306 are 98 pct identical to residues 1 to 299 of a 299 aa protein EAMA_ECOLI sp: P31125 Probable amino acid metabolite efflux pump	Putative uncharacterized protein	Integral membrane protein, similar to metabolite efflux pump hypothetical protein	conserved gene integral membrane protein	Integral membrane protein, similar to metabolite efflux pump hypothetical protein	Probable transmembrane protein, DMT Superfamily	IPR000620: Protein of unknown function DUF6 putative permease, integral membrane protein	conserved membrane protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative permease (drug/metabolite transporter)	Membrane protein, putative	Probable amino-acid metabolite efflux pump	Protein of unknown function DUF6	membrane protein, putative	Protein of unknown function DUF6, transmembrane	conserved hypothetical membrane protein	
ECOLI01488	Uncharacterized MFS-type transporter ydeE	Putative membrane protein	MFS transporter	Multidrug resistance protein B	Permease; probable multidrug resistance protein	Hypothetical protein ydeF	identified by match to protein family HMM PF00083 major facilitator family transporter	Putative uncharacterized protein	hypothetical protein	Putative transport protein	unknown protein	Multidrug resistance protein	Permease of the major facilitator superfamily	Residues 2 to 372 of 372 are 99 pct identical to residues 25 to 395 of a 395 aa protein from Escherichia coli K12 ref: NP_416051.1 putative transport protein	IPR007114: Major facilitator superfamily putative MFS family transport protein	Putative MFS family transport protein	identified by similarity to SP:P31126; match to protein family HMM PF07690 putative MFS transporter family protein	multidrug resistance protein B; transporter permease	identified by match to protein family HMM PF07690 major facilitator family transporter	transporter, major facilitator family identified by match to protein family HMM PF00083; match to protein family HMM PF07690	transporter, major facilitator family identified by match to protein family HMM PF00083; match to protein family HMM PF07690	Code: GEPR; COG: COG0477 putative transport protein	Putative uncharacterized protein	hypothetical protein similarity to COG0477 Permeases of the major facilitator superfamily(Evalue: 2E-26)	Major facilitator superfamily MFS_1	Putative uncharacterized protein ydeF	major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690	permease of the major facilitator superfamily	Putative multidrug resistance protein precursor	
ECOLI01490	Uncharacterized protein ydeH	Hypothetical protein ydeH	Putative uncharacterized protein ydeH	Putative diguanylate cyclase (GGDEF) with PAS/PAC domain	Putative uncharacterized protein	Signaling protein with a GGDEF domain	Code: T; COG: COG2199 conserved hypothetical protein	Putative diguanylate cyclase (GGDEF domain)	Diguanylate cyclase	Code: T; COG: COG2199; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydeH	Putative uncharacterized protein	diguanylate cyclase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein KEGG: rru:Rru_A0631 putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain	diguanylate cyclase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein KEGG: aae:aq_035 hypothetical protein	conserved hypothetical protein Code: T; COG: COG2199	conserved hypothetical protein	Diguanylate cyclase	GGDEF domain protein	Diguanylate cyclase	Diguanylate cyclase (GGDEF) domain protein	Diguanylate cyclase	Conserved protein	Diguanylate cyclase (GGDEF) domain protein	Diguanylate cyclase	Diguanylate cyclase (GGDEF) domain protein	jgi|Lacbi1|308624|eu2.Lbscf0003g02630	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01491	Uncharacterized protein ydeI	Putative uncharacterized protein ydeI	putative periplasmic protein	similar to Salmonella typhi CT18 putative periplasmic protein putative periplasmic protein	Putative periplasmic protein	Code: S; COG: COG3111 conserved hypothetical protein	Code: S; COG: COG3111; orf conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative periplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative periplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative periplasmic protein	Putative uncharacterized protein	
ECOLI01492	Protein ydeJ	Protein MG115 homolog	Putative uncharacterized protein	Putative uncharacterized protein	Competence/damage-inducible protein CinA	Putative uncharacterized protein STY1547	Putative uncharacterized protein ydeJ	similar to AE008766-5|AAL20433.1| percent identity: 29 in 153 aa putative competence-damage inducible protein	Residues 1 to 172 of 172 are 98 pct identical to residues 1 to 172 of a 172 aa protein from Escherichia coli K12 ref: NP_416055.1 orf, conserved hypothetical protein	putative Competence-damaged protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	CinA domain protein	Putative competence-damaged protein	conserved hypothetical protein	competence/damage-inducible protein CinA	identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199 CinA domain protein	Code: R; COG: COG1546 conserved hypothetical protein	Code: R; COG: COG1546 conserved hypothetical protein	CinA-like	CinA-like	Code: R; COG: COG1546; orf conserved hypothetical protein	probable CinA domain protein Protein ygaD. TREMBL:Q7W761: 58% identity, 68% similarity CinA is a DNA damage- or competence-inducible protein that is polycistronic with recA in a number of species. Several bacterial species have a protein consisting largely of the C-terminal domain of CinA but lacking the N-terminal domain. InterPro: Competence-damaged protein InterPro: IPR008136; CinA_C. Pfam: PF02464 cinA_cterm: competence/damage-inducible No Signal peptide (Signal P predicted) No transmembrane helices Function unclear	Competence/damage-inducible protein CinA	CinA domain protein PFAM: CinA domain protein KEGG: rpb:RPB_1678 CinA-like	CinA domain protein	putative ompetence-damaged protein	Putative Competence-damaged protein	conserved hypothetical protein Code: R; COG: COG1546	Uncharacterized protein (competence-and mitomycin-induced)	
ECOLI01493	Peptidyl-dipeptidase dcp	Peptidyl-dipeptidase	Dipeptidyl carboxypeptidase II	Zn-dependent oligopeptidases	Peptidyl-dipeptidase dcp	Peptidyl-dipeptidase Dcp	Putative peptidase	Dipeptidyl carboxypeptidase II	Residues 23 to 703 of 703 are 99 pct identical to residues 1 to 681 of a 681 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287612.1 dipeptidyl carboxypeptidase II	Peptidyl-dipeptidase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark peptidyl-dipeptidase	IPR006025: Neutral zinc metallopeptidases, zinc-binding site dipeptidyl carboxypeptidase II	similar to Salmonella typhi CT18 dipeptidyl carboxypeptidase II dipeptidyl carboxypeptidase II	Peptidyl-dipeptidase	Zn-dependent oligopeptidase	Peptidyl-dipeptidase dcp	peptidyl-dipeptidase	Peptidyl-dipeptidase DCP	Peptidyl-dipeptidase dcp (EC 3.4.15.5) (Dipeptidyl carboxypeptidase).,Removes dipeptides from the C-termini of N-blocked tripeptides tetrapeptides and larger peptides. peptidyl-dipeptidase	Code: E; COG: COG0339 dipeptidyl carboxypeptidase II	Code: E; COG: COG0339 dipeptidyl carboxypeptidase II	Code: E; COG: COG0339 dipeptidyl carboxypeptidase II	peptidyl-dipeptidase	Peptidyl-dipeptidase dcp	Peptidyl-dipeptidase Dcp precursor	peptidyl-dipeptidase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Peptidyl-dipeptidase Dcp precursor	Peptidyl-dipeptidase Dcp precursor	Peptidyl-dipeptidase dcp	
ECOLI01494	NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG	Probable NADP-dependent dehydrogenase HI1430	DEHA2G02684p;highly similar to uniprot|Q05016 Saccharomyces cerevisiae YMR226C NADP(+)-dependent dehydrogenase;	Putative short-chain dehydrogenase	Oxidoreductase, short-chain dehydrogenase/reductase family	YdfG	Serine 3-dehydrogenase	NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG	Putative short-chain dehydrogenase	Putative short-chain dehydrogenase	Oxidoreductase	NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG	Oxidoreductase, short chain dehydrogenase/reductase family	Probable oxidoreductase	Short chain alcohol dehydrogenase	Oxidoreductase, short chain dehydrogenase/reductase family	Oxidoreductase, short-chain dehydrogenase/reductase family	Putative oxidoreductase, short-chain dehydrogenase/reductase	NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG	Short chain dehydrogenase	Dehydrogenases with different specificities	Residues 6 to 253 of 253 are 98 pct identical to residues 1 to 248 of a 248 aa protein from Escherichia coli K12 ref: NP_416057.1 putative oxidoreductase	Probable oxidoreductase protein	Similar to probable oxidoreductase YdfG of Escherichia coli	similar to oxidoreductase, short chain dehydrogenase/reductase family hypothetical protein	similar to oxidoreductase, short chain dehydrogenase/reductase family hypothetical protein	Short chain dehydrogenase	IPR002198: Short-chain dehydrogenase/reductase SDR; IPR002347: Glucose/ribitol dehydrogenase putative oxidoreductase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	
ECOLI01495	Uncharacterized HTH-type transcriptional regulator ydfH	Probable transcriptional regulator	Transcriptional regulator, GntR family	Putative regulatory protein	Gluconate operon transcriptional repressor	Gluconate operon transcriptional repressor; transcriptional regulator, GntR family	Putative GntR family transcriptional regulator protein	Putative HTH-type transcriptional regulator ydfH	GntR-family transcriptional regulator	Transcriptional regulator, GntRfamily	TRANSCRIPTIONAL REGULATOR, GNTR FAMILY	Uncharacterized HTH-type transcriptional regulator ydfH	Transcriptional regulator, GntR family	Residues 1 to 212 of 212 are 98 pct identical to residues 17 to 228 of a 228 aa protein from Escherichia coli O157:H7 ref: NP_310176.1 orf, conserved hypothetical protein	Transcriptional regulator protein	hypothetical DNA-binding protein,putative transcriptional regulator	GntR family transcriptional regulator	IPR000524: Bacterial regulatory protein, GntR family putative regulatory protein, gntR family	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	Transcriptional regulator, GntR family	Putative gntR family regulatory protein	gluconate operon transcriptional repressor	Code: K; COG: COG1802 conserved hypothetical protein	Code: K; COG: COG1802 conserved hypothetical protein	transcriptional regulator, GntR family	Code: K; COG: COG1802; orf conserved hypothetical protein	transcriptional regulator, GntRfamily identified by match to protein family HMM PF00392	Hypothetical transcriptional regulator YdfH	Transcriptional regulator, GntR family	
ECOLI01496	Putative selenoprotein ydfZ	Putative selenoprotein ydfZ	Putative selenoprotein ydfZ	Residues 1 to 67 of 67 are 100 pct identical to residues 1 to 67 of a 67 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287609.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ydfZ	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01497	Uncharacterized oxidoreductase ydfI	Putative D-mannonate oxidoreductase	Putative mannitol dehydrogenase protein	Hypothetical oxidoreductase ydfI	Probable carbohydrate oxidoreductase	Mannitol dehydrogenase family protein	Putative oxidoreductase	Residues 1 to 486 of 486 are 98 pct identical to residues 1 to 486 of a 486 aa protein from Escherichia coli O157:H7 ref: NP_310178.1 putative oxidoreductase	IPR000669: Mannitol dehydrogenase putative mannitol dehydrogenase	similar to Salmonella typhimurium putative mannitol dehydrogenase putative mannitol dehydrogenase	Putative mannitol dehydrogenase	Code: G; COG: COG0246 putative oxidoreductase	D-mannonate oxidoreductase	Code: G; COG: COG0246 putative oxidoreductase	mannitol dehydrogenase family protein identified by match to protein family HMM PF01232; match to protein family HMM PF08125	Hypothetical oxidoreductase YdfI	Mannitol dehydrogenase	Hypothetical oxidoreductase YdfI	Mannitol dehydrogenase PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain KEGG: cef:CE2378 putative D-mannonate oxidoreductase	Hypothetical protein	Fructuronate reductase PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain KEGG: rsp:RSP_0480 D-mannonate oxidoreductase	putative oxidoreductase Code: G; COG: COG0246	putative oxidoreductase	Mannitol dehydrogenase family protein	Fructuronate reductase	Fructuronate reductase	Mannitol dehydrogenase family protein	Putative mannitol dehydrogenase	D-mannonate oxidoreductase	
ECOLI01498	Putative inner membrane metabolite transport protein ydfJ	Hypothetical metabolite transport protein ydfJ	Probable transport protein	Putative transport protein	Residues 1 to 326 of 326 are 100 pct identical to residues 102 to 427 of a 427 aa protein from Escherichia coli K12 ref: NP_416061.1 putative transport protein	Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021) putative transporter,membrane protein	IPR007114: Major facilitator superfamily putative membrane transport protein	similar to Salmonella typhi CT18 putative membrane transport protein putative membrane transport protein	Putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Hypothetical metabolite transport protein YdfJ	MFS family transporter: sugar go_component: integral to membrane; go_function: transporter activity; go_process: transport	putative transport protein Code: GEPR; COG: COG0477	Inner membrane metabolite transport protein YdfJ	Putative membrane transport protein	Metabolite/H+ symporter, major facilitator superfamily	Putative uncharacterized protein	Inner membrane metabolite transport protein ydfJ	Major facilitator superfamily MFS_1	Predicted transporter	Inner membrane metabolite transport protein ydfJ	Metabolite/H+ symporter, major facilitator superfamily	Inner membrane metabolite transport protein ydfJ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane transport protein	Inner membrane metabolite transport protein YdfJ	Inner membrane metabolite transport protein YdfJ	

ECOLI01500	Putative DNA-invertase from lambdoid prophage Qin	Resolvase, putative	Resolvase, putative	

ECOLI01502	Side tail fiber protein homolog from lambdoid prophage Qin	Qin prophage; predicted side tail fibre assembly protein	pseudo	pseudo	Qin prophage; predicted side tail fibre assembly protein	


ECOLI01505	Uncharacterized protein ydfO	Putative uncharacterized protein ydfO	conserved hypothetical protein YdfO	Qin prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein ydfO	Putative uncharacterized protein ydfO	Putative uncharacterized protein	Putative uncharacterized protein ydfO	Qin prophage; predicted protein	
ECOLI01506	Protein gnsB	GnsB protein	Qin prophage; predicted protein	Transcriptional regulator, GnsA/GnsB family	GnsAGnsB family protein	Putative uncharacterized protein gnsB	Putative uncharacterized protein gnsB	Putative uncharacterized protein	Putative uncharacterized protein gnsB	Qin prophage; predicted protein	
ECOLI01508	Cold shock-like protein cspI	Cold-shock domain family protein	Cold shock-like protein cspI	probable cold shock protein	putative cold-shock DNA-binding domain protein PFAM: Cold-shock protein, DNA-binding SMART: Cold shock protein KEGG: cte:CT0610 cold shock-like protein CspG	cold shock protein, DNA-binding	Putative uncharacterized protein	Qin prophage; cold shock protein	Cold shock DNA-binding protein	Cold-shock DNA-binding domain protein	Cold-shock DNA-binding domain protein	Cold-shock DNA-binding domain protein	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein	Cold-shock DNA-binding domain protein	Cold-shock protein DNA-binding	Cold-shock DNA-binding domain protein	Qin prophage; cold shock protein	Cold shock protein	Cold-shock DNA-binding domain protein	
ECOLI01508	Cold shock-like protein cspI	Cold-shock domain family protein	Cold shock-like protein cspI	probable cold shock protein	putative cold-shock DNA-binding domain protein PFAM: Cold-shock protein, DNA-binding SMART: Cold shock protein KEGG: cte:CT0610 cold shock-like protein CspG	cold shock protein, DNA-binding	Putative uncharacterized protein	Qin prophage; cold shock protein	Cold shock DNA-binding protein	Cold-shock DNA-binding domain protein	Cold-shock DNA-binding domain protein	Cold-shock DNA-binding domain protein	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein	Cold-shock DNA-binding domain protein	Cold-shock protein DNA-binding	Cold-shock DNA-binding domain protein	Qin prophage; cold shock protein	Cold shock protein	Cold-shock DNA-binding domain protein	
ECOLI01509	Uncharacterized protein ydfP	Hypothetical protein ydfP	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein gp55 precursor	Phage-tail assembly protein-like protein	conserved hypothetical protein	conserved hypothetical protein	phage protein	conserved hypothetical protein	Qin prophage; conserved protein	Putative uncharacterized protein	Phage-tail assembly-like protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein gp55	Protein gp55	Exported phage protein	Protein gp55	pseudo	Putative uncharacterized protein ydfP	Putative uncharacterized protein ydfP	Putative uncharacterized protein ydfP	Putative uncharacterized protein ydfP	Qin prophage; conserved protein	Putative prophage exported protein	
ECOLI01510	Probable lysozyme from lambdoid prophage Qin	Lysozyme	Phage related lysozyme	Residues 1 to 177 of 177 are 92 pct identical to residues 1 to 177 of a 177 aa protein from Bacteriophage 933W ref: NP_049505.1 endolysin	Lysozyme	putative lysozyme Code: R; COG: COG3772	Lysozyme unknown EC_number=3.2.1.17 PFAM: glycoside hydrolase family 24 KEGG: cvi:CV_0727 probable phage-related lysozyme	Putative transmembrane phage lysozyme precursor	Qin prophage; predicted lysozyme	Phage lysozyme	Lysozyme precursor	Phage lysozyme	Putative uncharacterized protein	Phage lysozyme	Lysozyme	Lysozyme	Phage lysozyme	Putative membrane-associated lysozyme; Qin prophage	Putative membrane-associated lysozyme; Qin prophage	Lysozyme	Lysozyme	Ybl59 protein	Lysozyme	Lysozyme	Lysozyme	Lysozyme	
ECOLI01511	Uncharacterized protein ydfR	hypothetical bacteriophage protein	Hypothetical phage protein	Qin prophage; predicted protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein ydfR	Putative uncharacterized protein ydfR	Putative uncharacterized protein ydfR	Qin prophage; predicted protein	hypothetical protein Prophage ECO103_P11	
ECOLI01512	Lysis protein S homolog from lambdoid prophage Qin	Lysis protein S	Qin prophage; predicted S lysis protein	Lysis S family protein	Putative uncharacterized protein	Putative phage lysis protein	Putative S lysis protein; Qin prophage	Putative S lysis protein; Qin prophage	Putative S lysis protein; Qin prophage	Putative S lysis protein; Qin prophage	Qin prophage; predicted S lysis protein	
ECOLI01513	Cold shock-like protein cspB	Cold shock-like protein cspB	Cold shock DNA-binding protein	Qin prophage; cold shock protein	Cold-shock DNA-binding domain protein	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold-shock DNA-binding domain protein	Qin prophage; cold shock protein	Cold-shock DNA-binding domain protein	
ECOLI01513	Cold shock-like protein cspB	Cold shock-like protein cspB	Cold shock DNA-binding protein	Qin prophage; cold shock protein	Cold-shock DNA-binding domain protein	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold-shock DNA-binding domain protein	Qin prophage; cold shock protein	Cold-shock DNA-binding domain protein	
ECOLI01514	Cold shock-like protein cspF	Cold shock-like protein cspF	Qin prophage; cold shock protein	Cold-shock DNA-binding domain protein	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Cold shock protein; Qin prophage	Qin prophage; cold shock protein	
ECOLI01515	Antitermination protein Q homolog from lambdoid prophage Qin	Lambdoid prophage Qin antitermination protein Q- like protein	Antitermination protein	Qin prophage; predicted antitermination protein Q	Antitermination protein	Putative uncharacterized protein	Antitermination protein	Putative prophage antitermination protein	Antitermination protein	Putative antitermination protein Q; Qin prophage	Putative uncharacterized protein	Putative antitermination protein Q; Qin prophage	Qin prophage; predicted antitermination protein Q	
ECOLI01516	Uncharacterized protein ydfU	Putative uncharacterized protein	hypothetical bacteriophage protein	hypothetical bacteriophage protein	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Phage protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydfU	Putative uncharacterized protein ydfU	Putative uncharacterized protein ydfU	Putative uncharacterized protein	Qin prophage; predicted protein	Hypothetical prophage protein	
ECOLI01517	Uncharacterized protein rem	Residues 1 to 83 of 83 are 93 pct identical to residues 1 to 83 of a 83 aa protein from Escherichia coli K12 ref: NP_416079.1 orf, conserved hypothetical protein	orf conserved hypothetical protein	conserved hypothetical protein	Qin prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein rem	Putative uncharacterized protein rem	Predicted protein	Putative uncharacterized protein rem	Rem protein	Putative uncharacterized protein	Qin prophage; predicted protein	Predicted protein	
ECOLI01518	Protein hokD	polypeptide destructive to membrane potential	polypeptide destructive to membrane potential RelF	polypeptide destructive to membrane potential	Putative cell killing protein encoded within cryptic prophage CP-933M	Hok/gef cell toxic protein	Qin prophage; small toxic polypeptide	Hok/gef cell toxic protein precursor	Regulator of hokC	Hypothetical phage protein	HokD protein	Qin prophage; small toxic polypeptide	Hok/gef cell toxic protein	
ECOLI01519	Toxin relE	putative relE protein	Product confidence : hypothetical Gene name confidence : putative predicted by Homology CONSERVED HYPOTHETICAL PROTEIN	Stability cassette protein, putative	Residues 1 to 96 of 96 are 100 pct identical to residues 1 to 96 of a 96 aa protein from Escherichia coli K12 gi: 1787846 orf, conserved hypothetical protein	Putative uncharacterized protein	Weakly similar to stability protein StbE hypothetical protein	Stability protein StbE	hypothetical protein	Cytotoxic translational repressor of toxin-antitoxin stability system	identified by similarity to GB:CAA26251.1; match to protein family HMM PF05016; match to protein family HMM TIGR02385 addiction module toxin RelE	Plasmid stabilization system	Plasmid stabilization system	Plasmid stabilization system	addiction module toxin, RelE/StbE family TIGRFAM: addiction module toxin, RelE/StbE family PFAM: plasmid stabilization system KEGG: bur:Bcep18194_B0155 plasmid stabilization system	addiction module toxin, RelE/StbE family TIGRFAM: addiction module toxin, RelE/StbE family PFAM: plasmid stabilization system KEGG: ppr:PBPRB1201 putative relE protein	plasmid stabilization system PFAM: plasmid stabilization system KEGG: bcn:Bcen_5358 plasmid stabilization system	Hypothetical protein	Putative uncharacterized protein	Glycyl-tRNA synthetase subunit beta	Addiction module toxin, RelE/StbE family	Addiction module toxin, RelE/StbE family	Plasmid stabilization system	TIGRFAM: addiction module toxin, RelE/StbE family PFAM: plasmid stabilization system KEGG: ypi:YpsIP31758_2227 addiction module toxin, RelE/StbE family addiction module toxin, RelE/StbE family	Addiction module toxin, RelE/StbE family	Putative relE protein	Qin prophage; toxin of the RelE-RelB toxin- antitoxin system	Addiction module toxin, RelE/StbE family	Addiction module toxin, RelE/StbE family	
ECOLI01520	Antitoxin RelB	Residues 1 to 79 of 79 are 100 pct identical to residues 1 to 79 of a 79 aa protein from Escherichia coli K12 ref: NP_416082.1 negative regulator of translation	Negative regulator of translation RelB protein	IPR007337: RelB antitoxin translation negative regulator	identified by similarity to SP:P07007; match to protein family HMM PF04221; match to protein family HMM TIGR02384 addiction module antitoxin RelB	RelB protein	putative RelB protein (antitoxin) Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type f : factor	negative regulator of translation Code: L; COG: COG3077	Addiction module antitoxin, RelB/DinJ family	Addiction module antitoxin, RelB/DinJ family	Addiction module antitoxin, RelB/DinJ family	Putative RelB protein	Qin prophage; bifunctional antitoxin of the RelE- RelB toxin-antitoxin system and transcriptional repressor	Addiction module antitoxin, RelB/DinJ family	Addiction module antitoxin, RelB/DinJ family	Transcriptional repressor, antitoxin for RelE- like	Conserved domain protein	Addiction module antitoxin, RelB/DinJ family	Bifunctional antitoxin of the RelE-RelB toxin- antitoxin system and transcriptional repressor; Qin prophage	Negative regulator of translation relb protein	Qin prophage; bifunctional antitoxin of the RelE- RelB toxin-antitoxin system, transcriptional repressor	
ECOLI01522	Protein flxA	Qin prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein flxA	Qin prophage; predicted protein	
ECOLI01523	Uncharacterized protein ydfW in Qin prophage region	
ECOLI01524	Uncharacterized protein ydfX	Qin prophage; predicted protein	
ECOLI01525	Repressor protein of division inhibition gene dicB	Residues 1 to 73 of 75 are 90 pct identical to residues 1 to 73 of a 75 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287509.1 putative regulator of cell division encoded by prophage CP-933O	putative regulator of cell division encoded by prophage	Repressor protein of division inhibition gene dicB	Qin prophage; DNA-binding transcriptional regulator for DicB	Putative regulator of cell division encoded by prophage	Conserved domain protein	DNA-binding transcriptional regulator for DicB; Qin prophage	DNA-binding transcriptional regulator for DicB; Qin prophage	Putative regulator of cell division encoded by prophage CP-933O	Qin prophage; DNA-binding transcriptional regulator for DicB	putative antirepressor Cro Prophage ECO103_P06	Putative uncharacterized protein	
ECOLI01526	HTH-type transcriptional regulator dicA	Similar to DicA, regulator of DicB encoded by prophage CP-933O	Residues 1 to 135 of 135 are 97 pct identical to residues 1 to 135 of a 135 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_287508.1 similar to DicA, regulator of DicB encoded by prophage CP-933O	Code: K; COG: COG1396 putative transcriptional regulator	putative transcriptional regulator	Putative transcriptional regulator DicA	Qin prophage; predicted regulator for DicB	Transcriptional regulator, XRE family	Predicted phage regulatory protein	Transcriptional regulator, XRE family	Putative phage regulator	Predicted phage repressor protein	Putative transcriptional regulator for DicB; Qin prophage	Ybl80 protein	Similar to dica, regulator of dicb encoded by prophage cp-933	Qin prophage; predicted regulator for DicB	Prophage CP-9330 DicA-like protein	
ECOLI01527	Uncharacterized protein ydfA	Hypothetical protein ydfA	Putative uncharacterized protein ydfA	Putative uncharacterized protein	pseudo	Putative uncharacterized protein ydfA	Putative uncharacterized protein ydfA	
ECOLI01529	Putative protein rzpQ from lambdoid prophage Qin	Putative uncharacterized protein ydfC	Qin prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical phage protein	Putative uncharacterized protein	Putative uncharacterized protein ydfC	Putative uncharacterized protein ydfC	Predicted protein	Putative uncharacterized protein ydfC	


ECOLI01530	Division inhibition protein dicB	Qin prophage; cell division inhibition protein	Division inhibition protein DicB	Hypothetical phage protein	Putative regulator of cell division encoded by prophage	Putative regulator of cell division encoded by prophage	Predicted cell division inhibition protein DicB	Putative regulator of cell division encoded by prophage	DicB protein	Qin prophage; cell division inhibition protein	Cell division inhibition protein	
ECOLI01531	Uncharacterized protein ydfD	Putative uncharacterized protein	Putative uncharacterized protein	Qin prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical phage protein	Putative uncharacterized protein ydfD	Putative uncharacterized protein ydfD	Putative uncharacterized protein ydfD	YdfD protein	Putative uncharacterized protein	Qin prophage; predicted protein	hypothetical protein Prophage ECO103_P03	Predicted protein	
ECOLI01532	Putative uncharacterized protein ydfE	Exonuclease family protein	YdfE protein	Putative uncharacterized protein	
ECOLI01533	pseudo	Code: L; COG: COG2801 IS2 ORF2	
ECOLI01534	Putative lambdoid prophage Qin defective integrase	Putative tyrosine-family recombinase/integrase	Site-specific recombinase, phage integrase family	hypothetical integrase for prophage CP-933V	Hypothetical protein	Putative pore-forming cytotoxin integrase	bacteriophage integrase	Similar to bacteriophage integrase	Gifsy-2 prophage integrase	site-specific recombinase, phage integrase family	Phage integrase	Hypothetical protein	Phage integrase	integrase, phage family, putative	Putative uncharacterized protein	site-specific recombinase, phage integrase family protein identified by match to protein family HMM PF00589	Hypothetical protein	bacteriophage-related integrase Function unclear	Bbp50 identified by match to protein family HMM PF00589	Putative phage integrase	Phage integrase	putative integrase	Hypothetical protein	Gp41 protein	Transposase	Putative lambdoid prophage Rac integrase	Integrase	Phage integrase family protein	
ECOLI01535	Starvation-sensing protein rspB	Vng1023c	Dehydrogenase family protein	Starvation sensing protein RspB	Putative zinc-containing alcohol dehydrogenase	Starvation sensing protein rspB	Putative starvation sensing zinc-binding dehydrogenase	Oxidoreductase, zinc-binding dehydrogenase family	BH1951 protein	Zinc-type alcohol dehydrogenase protein	Molecular Function: alcohol dehydrogenase activity, zinc-dependent (GO:0004024), Molecular Function: zinc ion binding (GO:0008270) Zinc-containing alcohol dehydrogenase	Zinc-dependent dehydrogenase	IPR002328: Zinc-containing alcohol dehydrogenase putative dehydrogenase	similar to Salmonella typhimurium putative dehydrogenase putative dehydrogenase	Putative dehydrogenase	Alcohol dehydrogenase GroES-like protein	Alcohol dehydrogenase, zinc-binding PFAM: Alcohol dehydrogenase, zinc-binding: (1.6e-30) Alcohol dehydrogenase GroES-like: (2.4e-12) KEGG: sil:SPO0616 oxidoreductase, zinc-binding dehydrogenase family, ev=1e-70, 44% identity	Alcohol dehydrogenase GroES-like	oxidoreductase, zinc-binding dehydrogenase family identified by match to protein family HMM PF00107	Starvation sensing protein RspB	Alcohol dehydrogenase, zinc-binding domain protein	Starvation sensing protein RspB	Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: rspB; oxidoreductase, zinc-binding dehydrogenase family	Threonine dehydrogenase or related Zn-dependent dehydrogenase	Putative NADPH:quinone oxidoreductase protein	threonine dehydrogenase (Zn dependent)	Putative dehydrogenase, starvation-sensing protein with NAD(P)-binding and GroES domains	Alcohol dehydrogenase, zinc-binding	starvation sensing protein RspB	
ECOLI01536	Starvation-sensing protein rspA	Mandelate racemase/muconate lactonizing enzyme family	Starvation sensing protein RspA	Putative mandelate racemase/muconate lactonizing enzyme	Starvation sensing protein rspA	Putative starvation sensing mandelate racemase , muconate lactonizing enzyme	Starvation sensing protein RspA	Starvation sensing protein	Residues 1 to 403 of 404 are 99 pct identical to residues 1 to 403 of a 404 aa protein from Escherichia coli K12 ref: NP_416098.1 starvation sensing protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark starvation sensing protein	IPR001354: Mandelate racemase/muconate lactonizing enzyme putative dehydratase, starvation sensing protein	similar to Salmonella typhi CT18 starvation sensing protein RspA starvation sensing protein RspA	Starvation sensing protein	Putative dehydratase	starvation sensing protein	Mandelate racemase/muconate lactonizing enzyme, N -terminal domain protein	mandelate racemase/muconate lactonizing enzyme	Starvation sensing protein	starvation sensing protein RspA identified by match to protein family HMM PF01188; match to protein family HMM PF02746	Starvation sensing protein RspA	starvation sensing protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Galactokinase	Mandelate racemase/muconate lactonizing enzyme- like	Starvation sensing protein RspA	mandelate racemase/muconate lactonizing enzyme	Mandelate racemase/muconate lactonizing enzyme, C -terminal domain protein	Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein KEGG: ccr:CC2812 mandelate racemase / muconate lactonizing enzyme family	starvation sensing protein Code: MR; COG: COG4948	L-Alanine-DL-glutamate epimerase, muconate lactonizing enzyme	
ECOLI01537	UPF0060 membrane protein ynfA	UPF0060 membrane protein XCC2880	UPF0060 membrane protein SAV_4756	UPF0060 membrane protein CC_1976	UPF0060 membrane protein PA3275	UPF0060 membrane protein Atu1058	UPF0060 membrane protein ynfA	UPF0060 membrane protein BPSL1340	putative inner membrane lipoprotein	UPF0060 membrane protein ynfA	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	UPF0060 membrane protein PSPTO_1628	hypothetical protein	UPF0060 membrane protein NFA_36830	UPF0060 membrane protein BMA0761	UPF0060 membrane protein ynfA	hypothetical protein	UPF0060 membrane protein RPA3838	UPF0060 membrane protein BH2744	SCE15.14, putative membrane protein, len: 112 aa; similar to others e.g. SW:YQ09_MYCTU (EMBL:Z80225) Mycobacterium tuberculosis hypothetical protein (110 aa) fasta scores; opt: 597, z-score: 741.6, E(): 0, (73.1% identity in 108 aa overlap) Contains possible hydrophobic membrane spanning regions putative membrane protein	Residues 4 to 111 of 111 are 99 pct identical to residues 1 to 108 of a 108 aa protein from Escherichia coli K12 ref: NP_416099.1 orf, conserved hypothetical protein	UPF0060 membrane protein SAV2339	UPF0060 membrane protein RSp1275	UPF0060 membrane protein CV_3485	Putative uncharacterized protein	UPF0060 membrane protein Rv2639c/MT2717	Mb2672c, -, len: 110 aa. Equivalent to Rv2639c, len: 110 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 110 aa overlap). Probable conserved integral membrane protein, highly similar to many bacterial hypothetical or membrane proteins e.g.  Q9X889|YE14_STRCO|SCE15.14 POTENTIAL INTEGRAL MEMBRANE PROTEIN from Streptomyces coelicolor (112 aa), FASTA scores: opt: 597, E(): 3.1e-31, (73.15% identity in 108 aa overlap); Q55939|Y793_SYNY3|SLL0793 POTENTIAL INTEGRAL MEMBRANE PROTEIN from Synechocystis sp. strain PCC 6803 (108 aa), FASTA scores: opt: 341, E(): 4.9e-15, (51.4% identity in 109 aa overlap); O31553|YFJF_BACSU POTENTIAL INTEGRAL MEMBRANE PROTEIN from Bacillus subtilis (109 aa), FASTA scores: opt: 334, E(): 1.4e-14, (47.5% identity in 109 aa overlap); etc. PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN	Cellular Component: membrane (GO:0016020) conserved membrane protein YfjF	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	
ECOLI01538	UPF0482 protein ynfB	Hypothetical protein ynfB	UPF0482 protein ECA2253	UPF0482 protein ynfB	Residues 1 to 113 of 113 are 99 pct identical to residues 1 to 113 of a 113 aa protein from Escherichia coli K12 ref: NP_416100.1 orf, conserved hypothetical protein	UPF0482 protein plu2232	putative periplasmic protein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	UPF0482 protein ynfB	conserved hypothetical protein	orf conserved hypothetical protein	UPF0482 protein ynfB	UPF0482 protein ynfB	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ynfB	Putative uncharacterized protein	UPF0482 protein ynfB precursor	Putative uncharacterized protein precursor	Predicted protein	UPF0482 protein ynfB precursor	UPF0482 protein ynfB precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ynfB	Putative secreted protein	
ECOLI01539	Spermidine N(1)-acetyltransferase	Acetyltransferase	Flagellin modification protein, putative	Spermidine N1-acetyltransferase	Spermidine N1-acetyltransferase	Lmo0009 protein	Acetyltransferase	Spermidine N1-acetyltransferase	Diamine N-acetyltransferase	Spermidine n(1)-acetyltransferase	Spermidine N(1)-acetyltransferase	putative acetyltransferase	identified by match to protein family HMM PF00583 spermidine N1-acetyltransferase	Spermidine n1-acetyltransferase	Putative acetyltransferase	FLAGELLAR PROTEIN G FLAG	probable acetyltransferase	Putative acetyltransferase	Spermidine n1-acetyltransferase	Spermidine N(1)-acetyltransferase	CDS_ID OB0365 hypothetical protein	Spermidine N1-acetyltransferase, putative	Spermidine N1-acetyltransferase	SCE6.13, possible acetyltransferase, len: 208 aa.  Similar to several including: Escherichia coli SW:ATDA_ECOLI(EMBL:D25276) spermidine N1-acetyltransferase (EC 2.3.1.57) (185 aa), fasta scores opt: 208 z-score: 273.6 E(): 8.2e-08 25.3% identity in 158 aa overlap and Streptomyces coelicolor TR:CAB76075(EMBL:AL157953) putative acetyltransferase, SCL11.12C (232 aa), fasta scores opt: 287 z-score: 372.5 E(): 2.6e-13 33.7% identity in 187 aa overlap. Contains a Pfam match to entry PF00583 Acetyltransf, Acetyltransferase (GNAT) family. putative acetyltransferase.	Lin0009 protein	similar to Escherichia coli K12 spermidine N1-acetyltransferase gi: 1787867 (187 aa). BLAST with identity of 98% in 187 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	Spermidine acetyltransferase	Spermidine N1-acetyltransferase	Molecular Function: N-acetyltransferase activity (GO:0008080) GCN5-related N-acetyltransferase	
ECOLI01540	UPF0257 lipoprotein ynfC	UPF0257 lipoprotein ynfC precursor	UPF0257 lipoprotein ynfC	Residues 1 to 207 of 207 are 100 pct identical to residues 42 to 248 of a 248 aa protein from Escherichia coli K12 ref: NP_416102.1 orf, conserved hypothetical protein	putative inner membrane lipoprotein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0257 lipoprotein ynfC	conserved hypothetical protein	orf conserved hypothetical protein	UPF0257 lipoprotein ynfC	Putative uncharacterized protein ynfC	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ynfC	Putative uncharacterized protein	Putative membrane protein	Predicted protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Lipoprotein YnfC	Lipoprotein YnfC	Lipoprotein YnfC	
ECOLI01541	Uncharacterized protein ynfD	Hypothetical protein ynfD	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 115 of 115 are 98 pct identical to residues 1 to 115 of a 115 aa protein from Escherichia coli K12 ref: NP_416103.1 orf, conserved hypothetical protein	Similar to unknown protein YnfD of Escherichia coli	putative outer membrane protein	similar to Salmonella typhimurium putative outer membrane protein putative outer membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative outer membrane protein	identified by match to protein family HMM PF06649 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ynfD	conserved hypothetical protein	conserved hypothetical protein; putative signal peptide Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein ynfD	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01542	Putative dimethyl sulfoxide reductase chain ynfE	Putative dimethyl sulphoxide reductase subunit	Putative dimethyl sulfoxide reductase chain ynfE	Putative oxidoreductase, major subunit	IPR006311: Twin-arginine translocation pathway signal; IPR006655: Prokaryotic molybdopterin oxidoreductase; IPR006656: Molybdopterin oxidoreductase;IPR006657: Molydopterin dinucleotide binding domain;IPR006963: Molybdopterin oxidoreductase Fe4S4 domain putative dimethyl sulphoxide reductase, chain A1	putative anaerobic dimethyl sulfoxide reductase chain A	Putative dimethyl sulphoxide reductase, chain A1	Putative dimethyl sulfoxide reductase chain YnfE	Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE	anaerobic dimethyl sulfoxide reductase chain A identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR02166	putative dimethyl sulfoxide reductase chain YnfE precursor	Putative dimethyl sulfoxide reductase, major subunit	Putative uncharacterized protein	Anaerobic dimethyl sulfoxide reductase, A subunit YnfE	Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family precursor	Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family precursor	Oxidoreductase subunit	Anaerobic dimethyl sulfoxide reductase, A subunit YnfE	Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family precursor	Anaerobic dimethyl sulfoxide reductase, A subunit YnfE	Putative uncharacterized protein	Putative uncharacterized protein	Anaerobic dimethyl sulfoxide reductase, A subunit YnfE	Putative anaerobic dimethyl sulfoxide reductase chain A	Anaerobic dimethyl sulfoxide reductase chain a	Anaerobic dimethyl sulfoxide reductase chain a	Anaerobic dimethyl sulfoxide reductase chain a	Putative dimethyl sulphoxide reductase subunit A	Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	
ECOLI01543	Probable dimethyl sulfoxide reductase chain ynfF	Probable dimethyl sulfoxide reductase chain ynfF	Putative oxidoreductase, major subunit	similar to Escherichia coli K12 putative oxidoreductase, major subunit gi: 1787871 (809 aa). BLAST with identity of 98% in 681 aa. This CDS contains deletion. The sequence has been checked and is believed to be correct. pseudo	IPR006655: Prokaryotic molybdopterin oxidoreductase putative dimethyl sulphoxide reductase	Putative dimethyl sulphoxide reductase	Code: C; COG: COG0243 putative oxidoreductase, major subunit	Probable dimethyl sulfoxide reductase chain YnfF	putative dimethyl sulfoxide reductase chain YnfF precursor	Molydopterin dinucleotide-binding region	Putative uncharacterized protein	Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	Oxidoreductase subunit	Anaerobic dimethyl sulfoxide reductase, A subunit	Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family precursor	Putative uncharacterized protein	Putative uncharacterized protein	Molybdopterin oxidoreductase	Anaerobic dimethyl sulfoxide reductase, A subunit	Molydopterin dinucleotide-binding region	Anaerobic dimethyl sulfoxide reductase chain a	Anaerobic dimethyl sulfoxide reductase chain a	Anaerobic dimethyl sulfoxide reductase chain a	Putative dimethyl sulphoxide reductase subunit	Anaerobic dimethyl sulfoxide reductase chain a	Anaerobic dimethyl sulfoxide reductase, A subunit	Anaerobic dimethyl sulfoxide reductase chain a	Putative dimethyl sulphoxide reductase subunit	Putative dimethyl sulfoxide reductase major subunit	
ECOLI01544	Probable anaerobic dimethyl sulfoxide reductase chain ynfG	Probable anaerobic dimethyl sulfoxide reductase chain ynfG	Anaerobic dimethyl sulfoxide reductase, B subunit	Putative oxidoreductase, Fe-S subunit	Residues 1 to 205 of 205 are 99 pct identical to residues 1 to 205 of a 205 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288024.1 putative oxidoreductase, Fe-S subunit	Code: C; COG: COG0437 putative oxidoreductase, Fe-S subunit	Code: C; COG: COG0437 putative oxidoreductase, Fe-S subunit	Fe-S subunit oxidoreductase	putative oxidoreductase, Fe-S subunit Code: C; COG: COG0437	dimethyl sulfoxide reductase, anaerobic, subunit B	Dimethylsulfoxide reductase, B subunit	Oxidoreductase, Fe-S subunit	Dimethylsulfoxide reductase, B subunit	Dimethylsulfoxide reductase, chain B	Dimethylsulfoxide reductase, B subunit	Anaerobic dimethyl sulfoxide reductase, B subunit	Anaerobic dimethyl sulfoxide reductase, B subunit	Putative dimethyl sulfoxide reductase Fe-S subunit	Oxidoreductase, Fe-S subunit	Oxidoreductase, Fe-S subunit	Oxidoreductase, Fe-S subunit	Oxidoreductase, Fe-S subunit	Oxidoreductase, Fe-S subunit	Oxidoreductase, Fe-S subunit	Oxidoreductase, Fe-S subunit	YnfG protein	Oxidoreductase, Fe-S subunit	Dimethylsulfoxide reductase, chain B	Oxidoreductase, Fe-S subunit	
ECOLI01545	Anaerobic dimethyl sulfoxide reductase chain ynfH	Anaerobic dimethyl sulfoxide reductase chain ynfH	Putative anaerobic dimethyl sulfoxide reductase, chain C	Putative DMSO reductase anchor subunit	Residues 1 to 238 of 238 are 97 pct identical to residues 127 to 364 of a 364 aa protein from Escherichia coli dbj: BAA15314.1 Anaerobic dimethyl sulfoxide reductase chain C (DMSO reductase anchor subunit).	putative dimethylsulfoxide reductase	similar to Salmonella typhi CT18 putative dimethyl sulphoxide reductase subunit putative dimethyl sulphoxide reductase subunit	Putative dimethylsulfoxide reductase	Code: R; COG: COG3302 putative DMSO reductase anchor subunit	Code: R; COG: COG3302 putative DMSO reductase anchor subunit	Code: R; COG: COG3302 putative DMSO reductase anchor subunit	Anaerobic dimethyl sulfoxide reductase chain ynfH	putative DMSO reductase anchor subunit Code: R; COG: COG3302	oxidoreductase, membrane subunit	Putative dimethyl sulfoxide reductase, anchor subunit	Putative uncharacterized protein	Anaerobic dimethyl sulfoxide reductase, C subunit	Oxidoreductase, membrane subunit	Anaerobic dimethyl sulfoxide reductase, C subunit	DMSO reductase anchor subunit	Anaerobic dimethyl sulfoxide reductase, C subunit	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Anaerobic dimethyl sulfoxide reductase, C subunit	Putative dimethyl sulphoxide reductase subunit	Dmso reductase anchor subunit	Dmso reductase anchor subunit	
ECOLI01546	Twin-arginine leader-binding protein dmsD	Putative uncharacterized protein	Twin-arginine leader-binding protein dmsD	hypothetical protein	Twin-arginine leader-binding protein dmsD	unknown	Putative uncharacterized protein	Putative component of anaerobic dehydrogenases	Twin-arginine leader-binding protein dmsD	Residues 1 to 207 of 207 are 100 pct identical to residues 1 to 207 of a 207 aa protein from Escherichia coli O157:H7 ref: NP_310324.1 putative oxidoreductase component	Putative oxidoreductase component	putative component of anaerobic dehydrogenases	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	anaerobic dimethyl sulfoxide reductase chain YnfI	Similar to: HI1044, YNFI_HAEIN conserved hypothetical protein	Uncharacterized component of anaerobic dehydrogenases TorD protein	Twin-arginine leader-binding protein dmsD	Code: R; COG: COG3381 putative oxidoreductase component	Code: R; COG: COG3381 putative oxidoreductase component	Putative uncharacterized protein	Cytoplasmic chaperone TorD family protein	Hypothetical protein	Cytoplasmic chaperone TorD family protein	Putative uncharacterized protein ynfI	Hypothetical protein	Hypothetical protein	Cytoplasmic chaperone TorD family protein	putative oxidoreductase	
ECOLI01548	Putative dethiobiotin synthetase	Probable dethiobiotin synthetase 1	Probable dethiobiotin synthetase 1	Probable dethiobiotin synthetase 2	putative dethiobiotin synthetase	Putative dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	Putative dethiobiotin synthetase	Residues 1 to 235 of 235 are 98 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288028.1 orf, conserved hypothetical protein	Probable dethiobiotin synthetase 2	Similar to putative dethiobiotin synthetase YnfK of Escherichia coli	putative dethiobiotin synthase	similar to Salmonella typhi CT18 putative dethiobiotin synthetase putative dethiobiotin synthetase	Probable dethiobiotin synthetase 2	dethiobiotin synthase 1; DTB synthetase 1; DTBS 1; Similar to: HI1445, BID1_HAEIN probable dethiobiotin synthetase 1	Probable dethiobiotin synthetase 2	probable dethiobiotin synthetase	Code: H; COG: COG0132 conserved hypothetical protein	Code: H; COG: COG0132 conserved hypothetical protein	Code: H; COG: COG0132; orf conserved hypothetical protein	Putative dethiobiotin synthetase	Putative dethiobiotin synthetase	Putative dethiobiotin synthetase	Dethiobiotin synthetase	Dethiobiotin synthetase	Putative dethiobiotin synthetase	conserved hypothetical protein Code: H; COG: COG0132	Dethiobiotin synthetase	
ECOLI01547	Voltage-gated ClC-type chloride channel clcB	Uncharacterized protein MJ0305	Chloride channel family protein, putative	Putative chloride channel protein	Voltage gated chloride channel family protein	Hypothetical membrane spanning protein	Voltage-gated ClC-type chloride channel clcB	Alr2079 protein	Putative transport-related, membrane protein	Chloride channel protein	Voltage-gated ClC-type chloride channel clcB	similar to GP:15156576; identified by sequence similarity; putative voltage gated chloride channel family protein	Voltage-gated chloride channel/CBS domain protein	CHLORIDE CHANNEL PROTEIN	Putative chloride channel related membrane protein	Voltage-gated ClC-type chloride channel clcB	Possible chloride channel	Permease, putative chloride channel	SCIF3.22c, possible transport integral membrane protein, len: 589 aa; similar to TR:O28857 (EMBL:AE001006) Archaeoglobus fulgidus chloride channel, putative AF1415, 589 aa; fasta scores: opt: 941 z-score: 956.9 E(): 0; 34.4% identity in 576 aa overlap. Contains Pfam match to entry PF00654 voltage_CLC, Voltage gated chloride channels and 2x PF00571 CBS, CBS domain. Also contains possible hydrophobic membrane spanning regions putative transport integral membrane protein	Residues 1 to 438 of 438 are 98 pct identical to residues 1 to 438 of a 438 aa protein from Escherichia coli K12 ref: NP_416109.1 putative chloride channel	Voltage-gated ClC-type chloride channel clcB	Putative chloride channel protein clcB-like	similar to chloride channel	identified by match to protein family HMM PF00654 voltage-gated chloride channel family protein	Voltage-gated ClC-type chloride channel clcB	Voltage-gated ClC-type chloride channel clcB	CBS:Cl-channel, voltage gated	Code: P; COG: COG0038 putative chloride channel	putative chloride channel	
ECOLI01549	Protein mlc	Transcriptional regulator	Putative regulatory protein	putative transcriptional regulator, ROK family	Mlc protein	Putative regulator	Rok-family transcriptional regulator	Putative glucose kinase	Transcriptional regulator, ROK family	Putative NAGC-like transcriptional regulator	Transcriptional regulator/sugar kinase	Residues 1 to 406 of 406 are 99 pct identical to residues 1 to 406 of a 406 aa protein from Escherichia coli K12 ref: NP_416111.1 putative NAGC-like transcriptional regulator	Putative ROK family transcriptional regulatory protein	Making large colonies protein	Glucokinase	IPR000600: ROK family transcriptional repressor of ptsG and ptsHI, global repressor of carbohydrate metabolism (pts operon) (NagC/XylR family)	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	similar to BRA1189, ROK family protein ROK family protein	Putative ROK family transcriptional regulatory protein	Glucokinase/Xylose repressor	best blastp match gb|AAK34323.1| (AE006586) glucose kinase [Streptococcus pyogenes M1 GAS] glucose kinase	Xylose repressor protein	Mlc protein	Transcriptional repressor of ptsG and ptsHI	probable transcriptional repressor of carbohydrate metabolism; PTS operon	xylose repressor glucokinase	Code: KG; COG: COG1940 putative NAGC-like transcriptional regulator	ROK family	Code: KG; COG: COG1940 putative NAGC-like transcriptional regulator	
ECOLI01550	Uncharacterized HTH-type transcriptional regulator ynfL	Putative regulatory protein	Hypothetical transcriptional regulator ynfL	Putative LysR-family transcriptional regulator	LysR-family transcriptional regulator	Putative LysR-family transcriptional regulator	LysR family transcriptional regulatory protein	Putative transcriptional regulator LYSR-type	Residues 1 to 300 of 300 are 98 pct identical to residues 1 to 297 of a 297 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288030.1 putative transcriptional regulator LYSR-type	Similar to probable transcription regulator LysR- type	transcriptional regulator, LysR family	InterProMatches:IPR000847; regulation of the alpha-acetolactate operon (alsSD), Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355) transcriptional regulator (LysR family)	IPR000847: Bacterial regulatory protein LysR, HTH motif putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	Putative uncharacterized protein ynfL	Putative LysR family transcriptional regulator	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	similar to gi|57285538|gb|AAW37632.1| [Staphylococcus aureus subsp. aureus COL], percent identity 50 in 295 aa, BLASTP E(): 2e-76 putative transcription activator of glutamate synthase operon	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	transcriptional regulator, LysR family	transcriptional regulator, LysR family	Transcriptional Regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Hypothetical transcriptional regulator YnfL	Putative transcriptional regulator LYSR-type	Hypothetical transcriptional regulator YnfL	LysR-family transcriptional regulator	Transcriptional regulator, LysR family	
ECOLI01551	Inner membrane transport protein ynfM	D-lactate dehydrogenase	Putative transport integral membrane protein	Probable major facilitator superfamily (MFS) transporter	Permease	Multidrug resistance protein, putative	Putative membrane transport protein	Related to membrane-bound transport protein	Permeases of the major facilitator superfamily	Putative transporter protein	putative multidrug resistance protein	Hypothetical transport protein ynfM	identified by match to PFAM protein family HMM PF04024 major facilitator family transporter	Multidrug resistance protein, putative	Putative transport protein	Multidrug resistance protein, putative	Putative transporter	Membrane transport protein	Uncharacterized transporter BUsg_567	Major facilitator superfamily protein	Putative transport protein	PUTATIVE TRANSPORT PROTEIN	Putative transporter	Major facilitator family transporter	Putative multidrug resistance protein	Putative transport protein	CDS_ID OB2541 hypothetical protein	similar to AE004916-4|AAG08415.1| percent identity: 39 in 409 aa putative transport protein	Uncharacterized transporter BU588	
ECOLI01552	Acid shock protein	Acid shock protein precursor	Acid shock protein	Acid shock protein	Residues 1 to 112 of 112 are 98 pct identical to residues 1 to 112 of a 112 aa protein from Escherichia coli K12 gi: 1787881 acid shock protein	Probable acid shock protein	acid shock protein	similar to Salmonella typhi CT18 putative secreted stress response protein putative secreted stress response protein	Acid shock protein	acid shock protein	acid shock protein	acid shock protein	Acid shock protein	Putative uncharacterized protein	TolA protein	Acid shock protein precursor	Putative acid shock protein precursor	acid shock protein	Acid shock protein precursor	acid shock protein precursor	Acid shock protein precursor	Putative uncharacterized protein	Acid shock repeat protein	Acid shock-inducible periplasmic protein	Acid shock protein precursor	Acid shock repeat protein	Acid shock protein precursor	Acid shock repeat protein	Putative uncharacterized protein	
ECOLI01554	Uncharacterized serine protease ydgD	Putative protease ydgD	Putative exported protease	Putative uncharacterized protein	Residues 1 to 273 of 273 are 99 pct identical to residues 1 to 273 of a 273 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288033.1 orf, conserved hypothetical protein	Putative pepetidase	identified by similarity to PIR:E85765 conserved domain protein	Putative uncharacterized protein	IPR001254: Peptidase S1, chymotrypsin family; IPR008256: Peptidase S1B, serine protease V8 putative protease	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative pepetidase	Putative protease	Putative protease	Code: E; COG: COG3591 conserved hypothetical protein	Code: E; COG: COG3591 conserved hypothetical protein	Code: E; COG: COG3591; orf conserved hypothetical protein	Peptidase S1 and S6, chymotrypsin/Hap	Putative protease YdgD	Putative pepetidase precursor	Putative uncharacterized protein	Putative protease ydgD	trypsin domain protein, putative	Pepetidase precursor	Possible protease	conserved hypothetical protein Code: E; COG: COG3591	Pepetidase precursor	putative protease	Peptidase S1 and S6, chymotrypsin/Hap precursor	Putative enzyme	
ECOLI01555	Spermidine export protein mdtI	Putative efflux protein	Spermidine export protein mdtI	Multidrug resistance protein mdtI	Multidrug resistance protein, Smr family	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE MULTIDRUG TRANSMEMBRANE RESISTANCE SIGNAL PEPTIDE PROTEIN	Putative multidrug transmembrane resistance signal peptide protein	Spermidine export protein mdtI	Residues 1 to 109 of 109 are 99 pct identical to residues 1 to 109 of a 109 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288034.1 possible chaperone	Spermidine export protein mdtI	Spermidine export protein mdtI	Probable multidrug transmembrane resistance signal peptide protein	identified by similarity to SP:O31791; match to protein family HMM PF00893 multidrug resistance protein, SMR family	putative membrane transporter of cations and cationic drugs	Predicted efflux protein	Spermidine export protein mdtI	Spermidine export protein mdtI	Code: P; COG: COG2076 possible chaperone	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative multidrug transport protein (SmR superfamily)	Code: P; COG: COG2076 possible chaperone	conserved hypothetical protein	Code: P; COG: COG2076 possible chaperone	small multidrug resistance protein PFAM: small multidrug resistance protein: (9.2e-16) KEGG: dvu:DVU3326 multidrug resistance protein, Smr family, ev=8e-18, 48% identity	Spermidine export protein mdtI	Putative integral membrane protein precursor	membrane transporters of cations and cationic drugs	Small multidrug resistance protein	Spermidine export protein mdtI	small multidrug resistance protein PFAM: small multidrug resistance protein KEGG: pae:PA1540 small multidrug resistance protein, SMR family	
ECOLI01556	Spermidine export protein mdtJ	Probable drug efflux transporter	Putative efflux protein	Spermidine export protein mdtJ	Multidrug resistance protein mdtJ	Multidrug resistance protein, Smr family	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE MULTIDRUG TRANSMEMBRANE RESISTANCE SIGNAL PEPTIDE PROTEIN	Putative multidrug transmembrane resistance signal peptide protein	Spermidine export protein mdtJ	Residues 1 to 121 of 121 are 100 pct identical to residues 1 to 121 of a 121 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288035.1 possible chaperone	Spermidine export protein mdtJ	Spermidine export protein mdtJ	Probable multidrug transmembrane resistance signal peptide protein	identified by match to protein family HMM PF00893 multidrug resistance protein, SMR family	putative membrane transporter of cations and cationic drugs	similar to Salmonella typhi CT18 putative conserved membrane protein putative conserved membrane protein	Predicted efflux protein	Spermidine export protein mdtJ	Spermidine export protein mdtJ	Code: P; COG: COG2076 possible chaperone	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative multidrug transport protein (SmR superfamily)	Code: P; COG: COG2076 possible chaperone	conserved hypothetical protein	Code: P; COG: COG2076 possible chaperone	small multidrug resistance protein PFAM: small multidrug resistance protein: (9.8e-07) KEGG: pae:PA1541 probable drug efflux transporter, ev=1e-16, 37% identity	Spermidine export protein mdtJ	Putative integral membrane protein precursor	membrane transporters of cations and cationic drugs	Spermidine export protein mdtJ	
ECOLI01557	AI-2 transport protein tqsA	Putative membrane protein	Hypothetical protein	glimmer prediction; similar to HYPOTHETICAL 37.5 KDA PROTEIN IN ASR-PNTB INTERGENIC REGION [Escherichia coli] ACCESSION P77535 conserved hypothetical protein	Putative transport protein	Residues 1 to 344 of 344 are 100 pct identical to residues 1 to 344 of a 344 aa protein from Escherichia coli K12 ref: NP_416118.1 putative transport protein	Putative membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative permease, PerM family	Predicted permease PerM protein	Putative membrane transport protein	Code: R; COG: COG0628 putative transport protein	Code: R; COG: COG0628 putative transport protein	Code: R; COG: COG0628 putative transport protein	Putative membrane protein	Putative membrane protein precursor	Hypothetical protein	Putative membrane protein	Putative transport protein	transport protein identified by match to protein family HMM PF01594	Membrane protein precursor	Hypothetical protein	protein of unknown function UPF0118 PFAM: protein of unknown function UPF0118 KEGG: shm:Shewmr7_1550 protein of unknown function UPF0118	putative transport protein Code: R; COG: COG0628	Membrane protein precursor	Putative transport protein/permease	conserved hypothetical protein	conserved hypothetical protein KEGG: son:SO2920 hypothetical protein	Putative uncharacterized protein precursor	
ECOLI01558	NAD(P) transhydrogenase subunit beta	NAD(P) transhydrogenase subunit beta	Putative pyridine nucleotide transhydrogenase, beta subunit	NAD(P) transhydrogenase, beta subunit	PntB	NAD(P) transhydrogenase, beta subunit	NAD(P)+ transhydrogenase beta chain	Pyridine nucleotide transhydrogenase subunit-beta	putative NAD(P) transhydrogenase, beta subunit	NAD(P) transhydrogenase subunit beta	NAD(P) transhydrogenase, beta subunit	NAD(P) transhydrogenase, beta subunit	Pyridine nucleotide transhydrogenase subunit-beta	NAD(P) transhydrogenase, beta subunit	NAD(P) transhydrogenase subunit beta	NAD(P) transhydrogenase, beta subunit	NAD(P) transhydrogenase subunit beta	NAD(P) transhydrogenase, beta subunit	SC2H2.20c, pntB, NAD(P) transhydrogenase beta subunit, len: 483 aa; similar to SW:PNTB_ECOLI (EMBL:X04195) Escherichia coli NAD(P) transhydrogenase subunit beta (EC 1.6.1.1) PntB, 462 aa; fasta scores: opt: 2012 z-score: 2208.6 E(): 0; 68.8% identity in 464 aa overlap. Contains Pfam match to entry PF02233 PNTB, NAD(P) transhydrogenase beta subunit. Also contains possible hydrophobic membrane spanning regions NAD(P) transhydrogenase beta subunit	NAD/NADP transhydrogenase beta subunit	Residues 1 to 462 of 462 are 100 pct identical to residues 1 to 462 of a 462 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288037.1 pyridine nucleotide transhydrogenase, beta subunit	NAD(P) transhydrogenase subunit beta	NAD(P) transhydrogenase subunit beta	identified by match to protein family HMM PF02233 NAD(P)+ transhydrogenase, beta subunit	NAD(P) transhydrogenase subunit beta	pyridine nucleotide transhydrogenase (proton pump), beta subunit	similar to Salmonella typhi CT18 pyridine nucleotide transhydrogenase subunit-beta pyridine nucleotide transhydrogenase subunit-beta	NAD(P) transhydrogenase subunit beta	Putative NAD(P) transhydrogenase beta subunit	
ECOLI01559	NAD(P) transhydrogenase subunit alpha	NAD(P) transhydrogenase subunit alpha	Putative pyridine nucleotide transhydrogenase, alpha subunit	NAD(P) transhydrogenase, alpha subunit	PntA	NAD(P) transhydrogenase, alpha subunit	NAD(P)+ transhydrogenase	Pyridine nucleotide transhydrogenase subunit- alpha	Related to cold-adapted alanine dehydrogenase	putative NAD(P) transhydrogenase, alpha subunit	NAD(P) transhydrogenase subunit alpha	NAD(P) transhydrogenase, alpha subunit	NAD(P) transhydrogenase, alpha subunit	Pyridine nucleotide transhydrogenase subunit- alpha	NAD(P) transhydrogenase subunit alpha	NAD(P) transhydrogenase, alpha subunit	Pyridine nucleotide transhydrogenase, alpha subunit	SC2H2.21c, pntA, NAD(P) transhydrogenase alpha subunit, len: 524 aa; similar to SW:PNTA_ECOLI (EMBL:X04195) Escherichia coli NAD(P) transhydrogenase subunit alpha (EC 1.6.1.1) PntA, 510 aa; fasta scores: opt: 1907 z-score: 1729.3 E(): 0; 58.4% identity in 514 aa overlap. Contains Pfam match to entry PF01262 AlaDh_PNT, Alanine dehydrogenase/pyridine nucleotide transhydrogenase. Also contains possible hydrophobic membrane spanning regions NAD(P) transhydrogenase alpha subunit	NAD/NADP transhydrogenase alpha subunit	Residues 19 to 528 of 528 are 99 pct identical to residues 1 to 510 of a 510 aa protein from Escherichia coli K12 ref: NP_416120.1 pyridine nucleotide transhydrogenase, alpha subunit	NAD(P) transhydrogenase alpha subunit	NAD(P) transhydrogenase subunit alpha	identified by match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00561 NAD(P) transhydrogenase, alpha subunit	NAD(P) transhydrogenase, alpha subunit	IPR008142: Alanine dehydrogenase/PNT, N-terminal subdomain; IPR008143: Alanine dehydrogenase/PNT, C-terminal subdomain pyridine nucleotide transhydrogenase (proton pump), alpha subunit	similar to Salmonella typhi CT18 pyridine nucleotide transhydrogenase subunit-alpha pyridine nucleotide transhydrogenase subunit-alpha	NAD(P) transhydrogenase alpha subunit	Putative NAD(P) transhydrogenase alpha subunit	NAD(P) transhydrogenase, alpha subunit	
ECOLI01560	Protein ydgH	Protein ydgH	Putative exported protein	Putative uncharacterized protein	Residues 1 to 314 of 314 are 99 pct identical to residues 1 to 314 of a 314 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288039.1 orf, conserved hypothetical protein	Putative exported protein	Similar to unknown protein YdgH of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative exported protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Protein YdgH	Hypothetical protein precursor	Putative uncharacterized protein	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ydgH	Putative uncharacterized protein	YdgH protein	Putative uncharacterized protein precursor	Predicted protein	
ECOLI01561	Putative arginine/ornithine antiporter	Arginine/ornithine antiporter	ArcD	Probable amino acid permease	Putative amino acid permease	Arginine/ornithine antiporter	Arginine/ornithine antiporter	Putative amino acid permease	Putative arginine/ornithine antiporter	identified by similarity to SP:P18275; match to protein family HMM PF00324; match to protein family HMM TIGR00905 arginine/ornithine antiporter	Amino acid permease	Arginine/ornithine antiporter	Putative arginine/ornithine antiporter	similar to AX063769-1|CAC25126.1| percent identity: 78 in 497 aa lysine transport protein	arginine/ornithine antiporter	Arginine/ornithine antiporter	Residues 1 to 460 of 460 are 100 pct identical to residues 1 to 460 of a 460 aa protein from Escherichia coli K12 ref: NP_416122.1 putative arginine-ornithine antiporter	Putative amino acid antiporter	Arginine/oirnithine antiporter	Similar to putative arginine/ornithine antiporter YdgI of Escherichia coli	identified by similarity to EGAD:21315; match to protein family HMM PF00324; match to protein family HMM TIGR00905 arginine/ornithine antiporter	Arginine/ornithine antiporter	Molecular Function: amino acid-polyamine transporter activity (GO:0005279), Biological Process: amino acid transport (GO:0006865), Cellular Component: membrane (GO:0016020), Molecular Function: amino acid-polyamine transporter activity (GO:0005279), Biolog Amino acid/polyamine transporter permease	Arginine/ornitine antiporter	IPR002293: Amino acid/polyamine transporter, family I putative amino acid transporter	similar to Salmonella typhi CT18 putative amino acid permease putative amino acid permease	Putative uncharacterized protein gbs2125	arginine/oirnithine antiporter	identified by match to PFAM protein family HMM PF00324 arginine/ornithine antiporter	
ECOLI01563	Inner membrane protein ydgC	Putative GlpM protein	Putative membrane protein	Probable membrane protein GlpM	Hypothetical protein ydgC	GlpM protein	Putative membrane protein	GLPM PROTEIN	Inner membrane protein ydgC	hypothetical protein	Uncharacterized membrane protein required for alginate biosynthesis	Residues 1 to 111 of 111 are 100 pct identical to residues 1 to 111 of a 111 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288042.1 orf, conserved hypothetical protein	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type m : membrane component membrane protein required for efficient alginate biosynthesis	Membrane protein, putative	Putative inner membrane protein	identified by similarity to SP:P52112 membrane protein GlpM	Code: R; COG: COG3136 conserved hypothetical protein	Code: R; COG: COG3136 conserved hypothetical protein	conserved hypothetical protein	GlpM	Code: R; COG: COG3136; orf conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein ydgC	Membrane protein	
ECOLI01562	Dihydrofolate reductase folM	Hypothetical oxidoreductase ydgB	Oxidoreductase, short chain dehydrogenase/reductase family	Probable short-chain dehydrogenase	Oxidoreductase, short chain dehydrogenase/reductase family	Dihydrofolate reductase folM	Residues 1 to 240 of 240 are 98 pct identical to residues 1 to 240 of a 240 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288041.1 putative oxidoreductase	Oxidoreductase, short-chain dehydrogenase/reductase family	Short chain dehydrogenase/reductase family protein	identified by match to protein family HMM PF00106 oxidoreductase, short chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106 oxidoreductase, short chain dehydrogenase/reductase family	Short-chain dehydrogenase/reductase SDR	Code: IQR; COG: COG1028 putative oxidoreductase	Evidence 2b : Function of strongly homologous gene; PubMedId : 14617668; Product type e : enzyme putative alternative dihydrofolate reductase, NAD(P)-binding domain	Code: IQR; COG: COG1028 putative oxidoreductase	short-chain dehydrogenase/reductase SDR	Short-chain dehydrogenase/reductase SDR	short-chain alcohol dehydrogenase-like protein COG1028	Code: IQR; COG: COG1028 putative oxidoreductase	Dihydrofolate reductase folM	Short-chain dehydrogenase/reductase SDR	Short-chain dehydrogenase/reductase SDR	Short-chain dehydrogenase/reductase SDR	Short-chain dehydrogenase/reductase SDR	Dihydrofolate reductase folM	short-chain dehydrogenase/reductase SDR PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR KEGG: lpp:lpp2921 pteridine reductase	pteridine reductase 1 identified by match to protein family HMM PF00106	short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR KEGG: sdn:Sden_0827 short-chain dehydrogenase/reductase SDR	Short chain dehydrogenase/reductase family protein	
ECOLI01564	Transcriptional regulatory protein rstA	Transcriptional Regulatory protein rstA	Two-component response regulator	Response transcriptional regulatory protein	Residues 18 to 259 of 267 are 99 pct identical to residues 1 to 242 of a 242 aa protein from Escherichia coli K12 ref: NP_416125.1 response transcriptional regulatory protein (RstB sensor)	Two-component regulatory system, response regulator protein	Probable two-component response regulator	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response regulator in two-component regulatory system with RstB (OmpR family)	similar to Salmonella typhi CT18 putative two-component response regulator putative two-component response regulator	Two-component regulatory system, response regulator protein	Response regulator in two-component regulatory system with RstB	Code: TK; COG: COG0745 response transcriptional regulatory protein (RstB sensor)	RstB sensor; Code: TK; COG: COG0745 response transcriptional regulatory protein	RstB sensor; Code: TK; COG: COG0745 response transcriptional regulatory protein	Transcriptional regulatory protein RstA	Two-component regulatory system, response regulator protein	Transcriptional regulatory protein RstA	Two-component regulatory system, response regulator protein	transcriptional regulatory protein RstA identified by match to protein family HMM PF00072; match to protein family HMM PF00486	Two-component regulatory system, response regulator protein	Two-component system response regulator RstA	response transcriptional regulatory protein Code: TK; COG: COG0745	two component transcriptional regulator, winged helix family PFAM: response regulator receiver; transcriptional regulator domain protein KEGG: sdn:Sden_0557 response regulator receiver	Two-component regulatory system, response regulator protein	transcriptional regulatory protein RstA	Two component transcriptional regulator, winged helix family	Two component transcriptional regulator, winged helix family	Response regulator (Activator) in two-component regulatory system with RstB	Putative uncharacterized protein	
ECOLI01565	Sensor protein rstB	Sensor protein	Sensor protein rstB	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor histidine kinase	similar to GB:M31834, SP:P17090, and PID:150919; identified by sequence similarity; putative osmolarity sensor protein EnvZ, putative	Sensor protein	Product confidence : putative putative two component sensor histidine kinase protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Residues 6 to 438 of 438 are 99 pct identical to residues 1 to 433 of a 433 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288044.1 sensor histidine protein kinase (RstA regulator)	Sensor protein	Sensor protein	Sensor protein	Sensor protein	IPR003660: Histidine kinase, HAMP region; IPR004358: Bacterial sensor protein, C-terminal; IPR005467: Histidine kinase sensory histidine kinase in two-component regulatory system with RstA	similar to Salmonella typhi CT18 two component sensor kinase two component sensor kinase	similar to BR1522, osmolarity sensor protein EnvZ EnvZ	Sensor protein	Sensor protein	Sensor protein	osmolarity sensor protein envZ	sensor histidine kinase	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor histidine kinase	identified by similarity to SP:P18392; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor protein RstB, putative	ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal	ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal	RstA regulator; Code: T; COG: COG0642 sensor histidine protein kinase	
ECOLI01567	Fumarate hydratase class II	Fumarase, converts fumaric acid to L-malic acid in the TCA cycle; cytosolic and mitochondrial localization determined by the N-terminal mitochondrial targeting sequence and protein conformation; phosphorylated in mitochondria. [Source:SGD;Acc:S000006183]	highly similar to sp|P55250 Rhizopus oryzae Fumarate hydratase, mitochondrial precursor (EC 4.2.1.2) (Fumarase), start by similarity	Fumarate hydratase class II 1	Fumarate hydratase, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC18.18c]	highly similar to sp|P08417 Saccharomyces cerevisiae YPL262w FUM1 fumarate hydratase singleton, start by similarity	Fumarate hydratase class II	Fumarate hydratase class II	Fumarate hydratase class II	Fumarate hydratase class II	highly similar to uniprot|P08417 Saccharomyces cerevisiae YPL262w FUM1 fumarate hydratase;	Fumarate hydratase class II	similar to SP:P35116,  and PID:154752; identified by sequence similarity; putative fumarate hydratase	Fumarate hydratase class II	hypothetical fumarate hydratase	Fumarate hydratase class II	Fumarate hydratase class II	Fumarate hydratase class II	Fumarate hydratase, class II, aerobic	Fumarate hydratase class II	Fumarate hydratase class II 2	Fumarate hydratase class II	Fumarate hydratase class II	Fumarate hydratase class II	Fumarate hydratase class II	Fumarate hydratase class II	Fumarate hydratase class II	Fumarate hydratase class II	Probable fumarate hydratase	
ECOLI01566	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	Residues 5 to 313 of 313 are 99 pct identical to residues 1 to 309 of a 309 aa protein from Escherichia coli K12 ref: NP_416127.1 DNA-binding protein; inhibition of replication at Ter sites	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	replication termination protein	similar to Salmonella typhi CT18 DNA replication terminus site-binding protein; DNA sequence-specific contrahelicase DNA replication terminus site-binding protein; DNA sequence-specific contrahelicase	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	inhibition of replication at Ter sites DNA-binding protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type f : factor putative DNA replication terminus site-binding protein (Ter binding protein)	inhibition of replication at Ter sites DNA-binding protein	DNA replication terminus site-binding protein (Ter protein)	inhibition of replication at Ter sites DNA-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein identified by match to protein family HMM PF05472; match to protein family HMM TIGR02648	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	DNA replication terminus site-binding protein	Putative uncharacterized protein	DNA replication terminus site-binding protein	
ECOLI01568	Fumarate hydratase class I, aerobic	Fumarate hydratase class I, aerobic	Fumarate hydratase class I, aerobic	Fumarate hydratase class I, aerobic	Residues 1 to 548 of 548 are 99 pct identical to residues 1 to 548 of a 548 aa protein from Escherichia coli K12 ref: NP_416129.1 fumarase A = fumarate hydratase Class I; aerobic isozyme	IPR000362: Fumarate lyase fumarase A (fumarate hydratase class I), aerobic isozyme	similar to Salmonella typhi CT18 Fumarate hydratase class I, aerobic Fumarate hydratase class I, aerobic	Fumarate hydratase class I, aerobic	fumarate hydratase Class I; aerobic isozyme; Code: C; COG: COG1951 fumarase A	fumarate hydratase Class I; aerobic isozyme; Code: C; COG: COG1951 fumarase A	fumarate hydratase Class I; aerobic isozyme; Code: C; COG: COG1951 fumarase A	utative fumarate hydratase class I, aerobic similarity:fasta; with=UniProt:FUMA_ECOLI (EMBL:AE016761); Escherichia coli O6.; fumA; Fumarate hydratase class I, aerobic (EC 4.2.1.2) (Fumarase).; length=547; id 67.358; 530 aa overlap; query 6-534; subject 11-539 similarity:fasta; with=UniProt:Q8G0X1_BRUSU (EMBL:AE014291); Brucella suis.; fumB; Fumarate hydratase,class I (EC 4.2.1.2).; length=539; id 86.629; 531 aa overlap; query 4-534; subject 8-538	Fumarate hydratase class I, aerobic	Fumarase A	Fumarate hydratase class I aerobic	Fumarate hydratase class I, aerobic Code: C; COG: COG1951	Fumarase	fumarate hydratase (fumarase A), aerobic Class I	Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit	Fumarase	Fumarase A (Fumarate hydratase class I), aerobic isozyme	Putative uncharacterized protein	Fumarate hydratase	Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit	jgi|Lotgi1|123266|e_gw1.43.101.1	Fumarate hydratase (Fumarase A), aerobic Class I	Fumarate hydratase	Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit	Fumarate hydratase	
ECOLI01569	Mannose-6-phosphate isomerase	mannose-6-phosphate isomerase;	Mannose-6-phosphate isomerase, catalyzes the interconversion of fructose-6-P and mannose-6-P; required for early steps in protein mannosylation.  [Source:SGD;Acc:S000000805]	similar to sp|P34948 Candida albicans Mannose-6-phosphate isomerase (EC 5.3.1.8), start by similarity	Mannose-6-phosphate isomerase [Source:GeneDB_Spombe;Acc:SPBC2G2.16]	highly similar to sp|P29952 Saccharomyces cerevisiae YER003c PMI40 mannose-6-phosphate isomerase singleton, start by similarity	highly similar to uniprot|P29952 Saccharomyces cerevisiae YER003c PMI40;	DEHA2B09350p;highly similar to CA0988|CaPMI40 Candida albicans CaPMI40 mannose-6-phosphate isomerase (phosphomannose isomerase) (pmi)(phosphohexomutase);	Putative mannose-6-phosphate isomerase	Mannose-6-phosphate isomerase	Mannose-6-phosphate isomerase	Related to mannose-6-phosphate isomerase	Phosphomannose isomerase	Putative mannose-6-phosphate isomerase	putative mannose-6-phosphate isomer	Mannose-6-phosphate isomerase	Mannose-6-phosphate isomerase	go_function: mannose-6-phosphate isomerase activity [goid 0004476]; go_process: pathogenesis [goid 0009405]; go_process: capsule organization and biogenesis [goid 0045230] mannose-6-phosphate isomerase	Mannose-6-phosphate isomerase	Putative mannose-6-phosphate isomerase	Mannose-6-phosphate isomerase	Putative mannose-phosphate isomerase	Mannose-6-phosphate isomerase	similar to AE007145-15|AAK47695.1| percent identity: 48 in 396 aa putative mannose-6-phosphate isomerase	Mannose-6-phosphate isomerase	SCE34.06c, manA, mannose-6-phosphate isomerase, len: 383 aa; similar to SW:MANA_ECOLI (EMBL:M15380) Escherichia coli mannose-6-phosphate isomerase (EC 5.3.1.8) ManA, 391 aa; fasta scores: opt: 912 z-score: 1055.7 E(): 0; 40.9% identity in 391 aa overlap. Contains Pfam match to entry PF01238 PMI_typeI, Phosphomannose isomerase type I and match to Prosite entry S00965 Phosphomannose isomerase type I signature 1 mannose-6-phosphate isomerase	Mannose-6-phosphate isomerase	Residues 27 to 417 of 417 are 99 pct identical to residues 1 to 391 of a 391 aa protein from Escherichia coli K12 ref: NP_416130.1 mannose-6-phosphate isomerase	Mannose-6-phosphate isomerase	
ECOLI01570	Protein ydgA	Putative uncharacterized protein	Hypothetical protein ydgA	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein ydgA	Residues 1 to 502 of 502 are 99 pct identical to residues 1 to 502 of a 502 aa protein from Escherichia coli K12 ref: NP_416131.1 orf, conserved hypothetical protein	Putative exported protein	Similar to probable membrane protein YdgA of Escherichia coli	C-terminal part similar to unknown virulence protein hypothetical protein	conserved gene probable membrane protein YdgA-like	C-terminal part similar to unknown virulence protein hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative exported protein	Similar to: HI1236, YC36_HAEIN conserved hypothetical protein	Putative uncharacterized protein	Uncharacterized conserved secreted protein	Putative periplasmic protein	identified by match to protein family HMM PF06097 conserved hypothetical protein	identified by match to protein family HMM PF06097 conserved hypothetical protein	protein of unknown function DUF945	Code: S; COG: COG5339 conserved hypothetical protein	Code: S; COG: COG5339 conserved hypothetical protein	conserved hypothetical protein	Protein of unknown function DUF945	Code: S; COG: COG5339; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	
ECOLI01571	Membrane-associated protein uidC	Putative uncharacterized protein	Residues 5 to 372 of 390 are 98 pct identical to residues 1 to 368 of a 417 aa protein from Escherichia coli K12 ref: NP_416132.1 membrane-associated protein	membrane-associated protein	membrane-associated protein	Hypothetical outer membrane porin	Membrane-associated protein UidC	membrane-associated protein	membrane-associated protein UidC precursor	Membrane-associated protein UidC	Predicted outer membrane porin protein	Membrane-associated protein UidC	Membrane-associated protein precursor	Membrane-associated protein UidC	Membrane-associated protein UidC	Putative uncharacterized protein	Outer membrane porin protein for glucuronides transport	Outer membrane porin protein for glucuronides transport	Outer membrane porin protein for glucuronides transport	Outer membrane porin protein for glucuronides transport	Outer membrane porin protein for glucuronides transport	pseudo	Outer membrane porin protein for glucuronides transport	UidC protein	Putative uncharacterized protein	Membrane-associated protein UidC	Predicted outer membrane porin protein	predicted outer membrane porin protein	Outer membrane porin	
ECOLI01572	Glucuronide carrier protein	Glucuronide carrier protein	Glucuronide permease	similar to Escherichia coli K12 glucuronide permease gi: 1787902 (458 aa). BLAST with identity of 98% in 344 aa. This CDS has been truncated. The sequence has been checked and is believed to be correct. pseudo	Code: G; COG: COG2211 glucuronide permease	Code: G; COG: COG2211 glucuronide permease	Code: G; COG: COG2211 glucuronide permease	Glucuronide carrier protein	Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family	Glucuronide carrier protein	transcript_id=ENSSTOT00000005049	glucuronide carrier protein	transcript_id=ENSOPRT00000012058	Glucuronide permease uidB	Glucuronide transporter	Glucuronide permease uidB	Glucuronide permease uidB	Putative GPH family sugar transporter	Glucuronide carrier protein	Glucuronide permease uidB	Glucuronide transport protein	Glucuronide transporter	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Glucuronide transporter	Glucuronide transporter	Glucuronide transporter	Glucuronide transporter	Glucuronide transporter UidB	Glucuronide transporter	
ECOLI01573	Beta-glucuronidase	Beta-glucuronidase	Beta-galactosidase	Beta-glucuronidase	Beta-glucuronidase	Beta-galactosidase	Beta-glucuronidase	Beta-glucuronidase	similar to AJ298137-2|CAC43287.1| percent identity: 46 in 455 aa putative beta-glucuronidase	Residues 1 to 566 of 567 are 99 pct identical to residues 1 to 566 of a 603 aa protein from Escherichia coli K12 ref: NP_416134.1 beta-D-glucuronidase	Putative uncharacterized protein gbs0671	identified by match to PFAM protein family HMM PF00703 beta-glucuronidase	Similar to Thermoanaerobacter mathranii beta-galactosidase Lac SWALL:Q93IM1 (EMBL:AJ316558) (751 aa) fasta scores: E(): 5.2e-31, 26.92% id in 702 aa, and to Bacteroides thetaiotaomicron beta-galactosidase BT0757 SWALL:AAO75864 (EMBL:AE016929) (682 aa) fasta scores: E(): 2.2e-207, 72.25% id in 656 aa, and to Bacteroides thetaiotaomicron beta-galactosidase BT2969 SWALL:AAO78075 (EMBL:AE016938) (702 aa) fasta scores: E(): 1.7e-81, 37.62% id in 699 aa putative beta-galactosidase	beta-glucuronidase	identified by similarity to SP:P05804; match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837 beta-glucuronidase	Code: G; COG: COG3250 beta-D-glucuronidase	Beta-glucuronidase	transcript_id=ENSETET00000014582	Beta-glucuronidase	Beta-glucuronidase PFAM: glycoside hydrolase family 2, immunoglobulin-like beta-sandwich: (0.011) glycoside hydrolase family 2, TIM barrel: (3.2e-13) glycoside hydrolase family 2, sugar binding: (1.7e-30) KEGG: sso:SSO3036 beta-glucuronidase, ev=2e-54, 29% identity	transcript_id=ENSGACT00000026795	Beta-glucuronidase	HflK	Beta-glucuronidase	transcript_id=ENSFCAT00000006929	transcript_id=ENSEEUT00000001883	Beta-glucuronidase	
ECOLI01574	HTH-type transcriptional regulator uidR	Transcriptional regulator, TetR family	HTH-type transcriptional regulator uidR	Transcriptional regulator, TetR family	TetR family transcriptional regulatory protein	Putative transcriptional regulator	HTH-type transcriptional regulator uidR	CDS_ID OB0520; TetR/AcrR family transcriptional regulator	Residues 1 to 196 of 196 are 100 pct identical to residues 1 to 196 of a 196 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288054.1 repressor for uid operon	TetR/AcrR family transcriptional regulator	Putative uncharacterized protein	Putative uncharacterized protein	Calsymin transcriptional regulator	POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN	Mb0068c, -, len: 189 aa. Equivalent to Rv0067c, len: 189 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 189 aa overlap). Possible transcriptional regulator, highly similar except in N-terminus to T44726 probable transcription regulator from Mycobacterium leprae (189 aa), FASTA scores: opt: 829, E(): 0, (68.3% identity in 189 aa overlap). And similar to others, often many members of the tetR family, e.g. T36918 probable transcription regulator from Streptomyces coelicolor (202 aa); NP_535866.1|NC_003306 transcriptional regulator TetR family from Agrobacterium tumefaciens strain C58 (Dupont) (194 aa); UIDR_ECOLI|Q59431 uid operon repressor (gus operon repressor) from Escherichia coli (196 aa), FASTA scores: opt: 200, E(): 7.2e-06, (24.7% identity in 186 aa overlap); etc. Also similar to MTCY8D5_28 from Mycobacterium tuberculosis cosmid (229 aa), FASTA score: (32.7% identity in 168 aa overlap).  Contains probable helix-turn-helix motif from aa 34 to 55 (Score 1523, +4.37 SD). POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY TETR-FAMILY)	possible transcriptional regulator (TetR family) possible transcriptional regulator YdgC	transcriptional regulator, TetR family	transcriptional regulator, TetR family	identified by similarity to GP:29605081; match to protein family HMM PF00440 transcriptional regulator, TetR family	Code: K; COG: COG1309 repressor for uid operon	Code: K; COG: COG1309 repressor for uid operon	transcriptional regulator, TetR family	Code: K; COG: COG1309 repressor for uid operon	Uid operon repressor	hypothetical protein similarity to COG1309 Transcriptional regulator	Transcriptional regulator, TetR family	Repressor for uid operon	transcriptional regulator, TetR family protein identified by match to protein family HMM PF00356; match to protein family HMM PF00440	Transcriptional regulator, TetR family	
ECOLI01575	7-alpha-hydroxysteroid dehydrogenase	7-alpha-hydroxysteroid dehydrogenase	Residues 1 to 205 of 206 are 97 pct identical to residues 1 to 205 of a 255 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288055.1 NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids	Code: IQR; COG: COG1028 NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids	dehydroxylation of bile acids; Code: IQR; COG: COG1028 NAD-dependent 7alpha-hydroxysteroid dehydrogenase	dehydroxylation of bile acids; Code: IQR; COG: COG1028 NAD-dependent 7alpha-hydroxysteroid dehydrogenase	7-alpha-hydroxysteroid dehydrogenase	7-alpha-hydroxysteroid dehydrogenase	7-alpha-hydroxysteroid dehydrogenase	Oxidoreductase, short chain dehydrogenase/reductase family	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	Oxidoreductase, short chain dehydrogenase/reductase family	Short-chain dehydrogenase/reductase SDR	Oxidoreductase, short chain dehydrogenase/reductase family	Oxidoreductase, short chain dehydrogenase/reductase family	Oxidoreductase, short chain dehydrogenase/reductase family	7-alpha-hydroxysteroid dehydrogenase	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	HdhA protein	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	7-alpha-hydroxysteroid dehydrogenase, NAD- dependent	7-alpha-hydroxysteroid dehydrogenase, NAD-dependent	7-alpha-hydroxysteroid dehydrogenase	
ECOLI01576	Maltose regulon regulatory protein malI	Repressor of malX and Y genes	Residues 1 to 342 of 342 are 99 pct identical to residues 1 to 342 of a 342 aa protein from Escherichia coli K12 ref: NP_416137.1 repressor of malX and Y genes	maltose regulon regulatory protein MalI	Code: K; COG: COG1609 repressor of malX and Y genes	Code: K; COG: COG1609 repressor of malX and Y genes	Code: K; COG: COG1609 repressor of malX and Y genes	Maltose regulon regulatory protein malI	Maltose regulon regulatory protein MalI	Maltose regulon regulatory protein precursor	repressor of malX and Y genes Code: K; COG: COG1609	maltose regulon regulatory protein MalI	ribose operon repressor	Transcriptional regulator, LacI family	Maltose regulon regulatory protein	Putative uncharacterized protein	Maltose regulon regulatory protein MalI	Transcriptional regulator, LacI family	DNA-binding transcriptional repressor	Maltose regulon regulatory protein MalI	Transcriptional regulator, LacI family	Maltose regulon regulatory protein MalI	Putative uncharacterized protein	Putative uncharacterized protein	Maltose regulon regulatory protein MalI	Maltose regulon regulatory protein MalI	Maltose regulon regulatory protein MalI	Maltose regulon regulatory protein MalI	Maltose regulon regulatory protein MalI	
ECOLI01577	PTS system maltose- and glucose-specific EIICB component	PTS system, maltose and glucose-specific IIABC component	PTS system glucose-specific IIABC component	PTS system, maltose and glucose-specific II ABC	SCF51A.12, malX, sugar phosphotransferase, len: 549 aa. Highly similar to Escherichia coli SW:PTOA_ECOLI (EMBL; M60722) PTS system, maltose and glucose-specific II ABC component (maltose and glucose-permease II ABC component) (phosphotransferase enzyme II, ABC component) (EC 2.7.1.69) (523 aa), fasta scores opt: 1852 z-score: 2064.1 E():0 59.5% identity in 543 aa overlap. Contains a Pfam match to entry PF00367 PTS_EIIB, phosphotransferase system, EIIB and a Prosite hit to PS01035 PTS EIIB domains cysteine phosphorylation site signature. Contains multiple possible membrane spanning hydrophobic domains sugar phosphotransferase	Residues 69 to 598 of 598 are 99 pct identical to residues 1 to 530 of a 530 aa protein from Escherichia coli K12 ref: NP_416138.1 PTS system, maltose and glucose-specific II ABC	PTS system, glucose-specific IIABC component	Code: G; COG: COG1263 PTS system, maltose and glucose-specific II ABC	PTS system maltose and glucose-specific II ABC; Code: G; COG: COG1263 MalX	Code: G; COG: COG1263 PTS system, maltose and glucose-specific II ABC	PTS system, maltose and glucose-specific IIABC component	PTS system, IIBC component, putative identified by similarity to SP:P19642; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826	PTS system, maltose and glucose-specific IIABC component	PTS system, maltose and glucose-specific IIabc component precursor	PTS system, maltose and glucose-specific IIbc component	PTS system, maltose and glucose-specific II ABC Code: G; COG: COG1263	PTS system, maltose and glucose-specific IIABC component	PTS system, maltose and glucose-specific IIBC subunit	PTS system, IIabc component precursor	PTS family enzyme IIC/enzyme IIB	Putative uncharacterized protein	PTS system, maltose and glucose-specific IIBC component	PTS system, maltose and glucose-specific IIBC subunit precursor	PTS system, maltose/glucose-specfic, IIBC component	PTS system maltose-and glucose-specific EIICB component	PTS system, maltose and glucose-specific IIBC component	PTS system, maltose and glucose-specific IIBC component	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01578	Protein malY	MalY protein	Enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase	SCF51A.13, malY, aminotransferase, len: 401 aa.  Highly similar to Escherichia coli SW:MALY_ECOLI (EMBL; M60722) MalY protein (EC 2.6.1.-) (390 aa), fasta scores opt: 1577 z-score: 1814.7 E():0 58.5% identity in 386 aa overlap aminotransferase	Residues 1 to 390 of 390 are 98 pct identical to residues 1 to 390 of a 390 aa protein from Escherichia coli K12 ref: NP_416139.1 enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase	Cystathionine beta-lyase	MalT protein regulator cystathionine beta-lyase	Code: E; COG: COG1168 enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase	enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase; Code: E; COG: COG1168 MalY	enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase; Code: E; COG: COG1168 MalY	MalY protein	Maltose regulon modulator	protein MalY identified by match to protein family HMM PF00155	Putative aminotransferase	MalY protein	Cystathionine beta-lyase Code: E; COG: COG1168	aminotransferase, class I and II PFAM: aminotransferase, class I and II KEGG: dde:Dde_0276 aminotransferase, classes I and II	bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon	Aminotransferase, class I	Aminotransferase, class I and II	Bifunctional PLP-dependent beta-cystathionase; repressor of maltose regulon through interaction with MalT	Aminotransferase, class I and II	Putative uncharacterized protein	MalY protein	Aminotransferase class I and II	Bifunctional beta-cystathionase, PLP-dependent and regulator of maltose regulon	MalY protein	Aminotransferase class I and II	Maltose regulon modulator MalY	
ECOLI01579	Adenosine deaminase	Adenosine deaminase	Adenosine deaminase	Adenosine deaminase	Adenosine deaminase	Adenosine deaminase	putative adenosine deaminase	Add protein	Adenosine deaminase	Adenosine deaminase	Adenosine deaminase	Adenosine deaminase	Putative adenosine deaminase	Adenosine deaminase	Adenosine deaminase	Adenosine deaminase 1	Adenosine deaminase	Putative uncharacterized protein	Adenosine deaminase	Adenosine deaminase protein	Adenosine deaminase	Residues 1 to 333 of 333 are 99 pct identical to residues 1 to 333 of a 333 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288059.1 adenosine deaminase	Adenosine deaminase	adenosine deaminase	Adenosine deaminase	Adenosine deaminase	Mb3342c, add, len: 365 aa. Equivalent to Rv3313c, len: 365 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 365 aa overlap). Probable add, adenosine deaminase (EC 3.5.4.4), equivalent to Q9CCL9|ADD|ML0700 PUTATIVE ADENOSINE DEAMINASE from Mycobacterium leprae (362 aa), FASTA scores: opt: 2097, E(): 1.4e-127, (88.2% identity in 356 aa overlap) . Also similar to many e.g. Q9AK25|2SCK8.27 from Streptomyces coelicolor (396 aa), FASTA scores: opt: 1578, E(): 3.7e-94, (66.65% identity in 360 aa overlap); Q17747|C06G3.5 from Caenorhabditis elegans (349 aa), FASTA scores: opt: 435, E(): 1.1e-20, (29.6% identity in 348 aa overlap); P22333|ADD_ECOLI|B1623 from Escherichia coli strain K12 (333 aa), FASTA scores: opt: 380, E(): 3.7e-17, (29.4% identity in 340 aa overlap); etc. BELONGS TO THE ADENOSINE AND AMP DEAMINASES FAMILY. PROBABLE ADENOSINE DEAMINASE ADD (ADENOSINE AMINOHYDROLASE)	adenosine deaminase	Adenosine deaminase	
ECOLI01580	Uncharacterized oxidoreductase ydgJ	similar to sp|Q04869 Saccharomyces cerevisiae YMR315w singleton, start by similarity	Oxidoreductase	Putative oxidoreductase	Putative uncharacterized protein	Predicted dehydrogenase	Putative oxidoreductase	Oxidoreductase, Gfo/Idh/MocA family	Probable oxidoreductase	Oxidoreductase	Oxidoreductase, Gfo/Idh/MocA family	Putative oxidoreductase	Hypothetical oxidoreductase ydgJ	identified by match to protein family HMM PF01408; match to protein family HMM PF02894 oxidoreductase, Gfo/Idh/MocA family	Oxidoreductase, Gfo/Idh/MocA family	Putative oxidoreductase	Putative oxidoreductase	Oxidoreductase, Gfo/Idh/MocA family	Putative uncharacterized protein	SCE20.21, possible oxidoreductase, len: 360 aa.  Similar to several other putative oxidoreductases e.g.  Escherichia coli SW:YDGJ_ECOLI(EMBL:AE000258) hypothetical oxidoreductase (346 aa), fasta scores opt: 873 z-score: 972.9 E():0 45.0% identity in 353 aa overlap. Contains a Pfam match to entry PF01408 GFO_IDH_MocA, Oxidoreductase family. putative oxidoreductase.	Predicted dehydrogenase	Residues 1 to 359 of 359 are 99 pct identical to residues 1 to 359 of a 359 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288060.1 orf, conserved hypothetical protein	Putative oxidoreductase	Similar to hypothetical oxidoreductase YdgJ of Escherichia coli	Probable oxidoreductase	Biological Process: electron transport (GO:0006118), Biological Process: metabolism (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491) putative oxidoreductase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark oxidoreductase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	Oxidoreductase	
ECOLI01582	OriC-binding nucleoid-associated protein	H-NS/stpA-binding protein 2	OriC-binding nucleoid-associated protein	Residues 1 to 71 of 71 are 100 pct identical to residues 1 to 71 of a 71 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288061.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	OriC-binding nucleoid-associated protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	OriC-binding nucleoid-associated protein	OriC-binding nucleoid-associated protein	conserved hypothetical protein	Haemolysin expression modulating family protein	Putative uncharacterized protein ydgT	Putative uncharacterized protein	Haemolysin expression modulating protein	Haemolysin expression modulating family protein	Predicted regulator	Haemolysin expression modulating protein	Haemolysin expression modulating family protein	Haemolysin expression modulating protein	Putative uncharacterized protein	Putative uncharacterized protein	Haemolysin expression modulating protein	Putative uncharacterized protein	Conserved domain protein	Conserved domain protein	
ECOLI01583	Inner membrane protein ydgK	Hypothetical protein ydgK	Putative uncharacterized protein	Residues 1 to 154 of 154 are 98 pct identical to residues 1 to 154 of a 154 aa protein from Escherichia coli K12 ref: NP_416143.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to probable membrane protein YdgK of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical membrane protein YdgK	Putative membrane protein precursor	Putative uncharacterized protein ydgK	Membrane protein precursor	Putative membrane protein precursor	conserved hypothetical protein	Membrane protein precursor	conserved hypothetical protein	Putative inner membrane protein precursor	Putative oxidoreductase	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Conserved inner membrane protein	Putative uncharacterized protein	Putative membrane protein	
ECOLI01584	Electron transport complex protein rnfA	Na+-transporting NADH:ubiquinone oxidoreductase, subunit 5	Electron transport complex protein rnfA	Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfA	Probable Na-translocating NADH-quinone reductase	Electron transport complex protein rnfA	Electron transport complex protein rnfA	Na-translocating NADH-quinone reductase, Nqr5 subunit	Electron transport complex protein rnfA	Electron transport complex protein rnfA	Electron transport complex protein RnfA	putative RnfA-related protein (RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA)	Electron transport complex protein rnfA	Electron transport complex protein RnfA, putative	Electron transport complex protein rnfA	RnfAE/NqrDE family protein	Electron transport complex protein rnfA	Na+-transporting NADH-quinone reductase subunit 5	Electron transport complex protein rnfA	RnfA/nqrE	Electron transport complex, RnfABCDGE type, A subunit	Electron transport complex protein rnfA	Electron transport complex protein rnfA	Na(+)-translocating NADH-quinone reductase, E subunit	Electron transport complex protein rnfA	Electron transport complex protein rnfA	Residues 1 to 193 of 193 are 99 pct identical to residues 1 to 193 of a 193 aa protein from Escherichia coli O157:H7 ref: NP_310363.1 orf, conserved hypothetical protein	Electron transport complex protein rnfA	Electron transport complex protein rnfA	
ECOLI01585	Electron transport complex protein rnfB	Ferredoxin II	Electron transport complex protein rnfB	Ferredoxin-like protein	Electron transport complex protein rnfB	Electron transport complex protein rnfB	Electron transport complex protein rnfB	Electron transport complex protein rnfB	Putative RnfB-related protein	Electron transport complex protein rnfB	Electron transport complex protein rnfB	Putative ferredoxin	Putative ferredoxin	Iron-sulfur cluster-binding protein	Electron transport complex protein rnfB	Electron transport complex protein rnfB	Putative ferredoxin	Electron transport complex protein rnfB	Electron transport complex protein rnfB	Electron transport complex protein	Electron transport complex protein rnfB	Electron transport complex protein rnfB	Residues 1 to 192 of 192 are 99 pct identical to residues 1 to 192 of a 192 aa protein from Escherichia coli O157:H7 ref: NP_310364.1 orf, conserved hypothetical protein	Electron transport complex protein rnfB	3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain	Electron transport complex protein RnfB	Similar to electron transport complex protein rnfB hypothetical protein	conserved gene iron-sulfur cluster binding protein	Similar to electron transport complex protein rnfB hypothetical protein	
ECOLI01586	Electron transport complex protein rnfC	Electron transport complex protein rnfC	Electron transport complex protein rnfC	Predicted NADH:ubiquinone oxidoreductase, subunit RnfC	Putative NADH reducing dehydrogenase	putative NADH:ubiquinone oxidoreductase, subunit RnfC	Electron transport complex protein rnfC	Electron transport complex protein rnfC	Iron-sulfur cluster-binding protein	Electron transport complex protein rnfC	RnfC-related protein	Electron transport complex protein rnfC	Na(+)-translocating NADH-quinone reductase, A subunit	RnfC-related protein	Residues 1 to 740 of 740 are 97 pct identical to residues 1 to 740 of a 740 aa protein from Escherichia coli K12 ref: NP_416146.1 putative membrane protein	Putative iron-sulfur binding NADH dehydrogenase	Electron transport complex protein RnfC	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain putative respiratory-chain NADH dehydrogenase	similar to Salmonella typhi CT18 putative NADH reducing dehydrogenase putative NADH reducing dehydrogenase	Putative iron-sulfur binding NADH dehydrogenase	Electron transport complex, C subunit	electron transport complex protein RnfC	Similar to: HI1685, RNFC_HAEIN predicted NADH:ubiquinone oxidoreductase, subunit RnfC	Na+-transporting NADHubiquinone oxidoreductase alpha subunit NqrA protein	Predicted NADH:ubiquinone oxidoreductase, subunit RnfC	Electron transport complex protein rnfC	putative electron transport complex protein	identified by match to protein family HMM PF00037; match to protein family HMM PF01512; match to protein family HMM TIGR01945 electron transport complex, RnfABCDGE type, C subunit	putative iron-sulfur binding NADH dehydrogenase	
ECOLI01587	Electron transport complex protein rnfD	Electron transport complex protein rnfD	Electron transport complex protein rnfD	Electron transport complex protein rnfD	Electron transport complex protein rnfD	putative RnfD-related protein	Electron transport complex protein rnfD	Electron transport complex protein rnfD	Membrane protein, putative	Electron transport complex protein rnfD	Electron transport complex protein rnfD	Electron transport complex protein rnfD	Electron transport complex protein rnfD	Electron transport complex protein rnfD	Electron transport complex protein rnfD	Residues 1 to 352 of 352 are 99 pct identical to residues 1 to 352 of a 352 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288066.1 orf, conserved hypothetical protein	Electron transport complex protein rnfD	Electron transport complex protein RnfD	putative oxidoreductase	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Electron transport complex protein rnfD	Electron transport complex, D subunit	electron transport complex protein RnfD	Similar to: HI1686, RNFD_HAEIN predicted NADH:ubiquinone oxidoreductase, subunit RnfD	Na+-transporting NADHubiquinone oxidoreductase subunit 2 NqrB protein	Membrane protein, putative	Predicted NADH:ubiquinone oxidoreductase, subunit RnfD	Electron transport complex protein rnfD	Electron transport complex protein rnfD	
ECOLI01588	Electron transport complex protein rnfG	Electron transport complex protein rnfG	Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfG	Electron transport complex protein rnfG	Electron transport complex protein rnfG	Electron transport complex protein rnfG	Electron transport complex protein rnfG	Electron transport complex protein RnfG	hypothetical RnfG-related protein	Electron transport complex protein rnfG	Electron transport complex protein rnfG	Putative uncharacterized protein	Electron transport complex protein rnfG	Electron transport complex protein rnfG	Electron transport complex protein rnfG	Electron transport complex protein rnfG	RnfG-related protein	Residues 1 to 206 of 206 are 99 pct identical to residues 1 to 206 of a 206 aa protein from Escherichia coli K12 ref: NP_416148.1 orf, conserved hypothetical protein	Electron transport complex protein rnfG	Electron transport complex protein rnfG	putative Na+-transporting NADH:ubiquinone oxidoreductase gamma subunit	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative exported protein	Electron transport complex, G subunit	COG4659 NADH:ubiquinone oxidoreductase subunit	electron transport complex protein RnfG	Similar to: HI1687, RNFG_HAEIN predicted NADH:ubiquinone oxidoreductase, subunit RnfG	Similar to Escherichia coli electron transport complex protein RnfG or B1631 SWALL:RNFG_ECOLI (SWALL:P77285) (206 aa) fasta scores: E(): 1.5e-10, 34.37% id in 192 aa, and to Bacteroides thetaiotaomicron Na+-transporting NADH:ubiquinone oxidoreductase, electron transport complex protein RnfG BT0620 SWALL:Q8AA45 (EMBL:AE016928) (227 aa) fasta scores: E(): 5.8e-40, 80% id in 210 aa electron transport complex protein RnfG	Na+-transporting NADHubiquinone oxidoreductase gamma subunit NqrC protein	
ECOLI01589	Electron transport complex protein rnfE	Na+-transporting NADH:ubiquinone oxidoreductase, subunit 4	Electron transport complex protein rnfE	Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE	Electron transport complex protein rnfE	Electron transport complex protein rnfE	Na-translocating NADH-quinone reductase, Nqr4 subunit	Electron transport complex protein rnfE	Electron transport complex protein rnfE	Related to Na-translocating NADH-quinone reductase, Nqr4 subunit	Electron transport complex protein RnfE	Putative RnfE-related protein (electron transport complex protein)	Electron transport complex protein rnfE	Electron transport complex protein RnfE, putative	Electron transport complex protein rnfE	NqrDE/RnfAE family protein	Electron transport complex protein	Na+-transporting NADH-quinone reductase subunit 4	Electron transport complex protein rnfE	RnfE/nqrD	Electron transport complex, RnfABCDGE type, E subunit	Electron transport complex protein rnfE	Electron transport complex protein rnfE	Na(+)-translocating NADH-quinone reductase, D subunit	Electron transport complex protein rnfE	Electron transport complex protein rnfE	Residues 1 to 231 of 231 are 99 pct identical to residues 1 to 231 of a 231 aa protein from Escherichia coli K12 ref: NP_416149.1 orf, conserved hypothetical protein	Electron transport complex protein rnfE	Electron transport complex protein RnfE	
ECOLI01590	Endonuclease III	Endonuclease III	Endonuclease III	DNA-(Apurinic or apyrimidinic site) lyase	DNA endonuclease III, probable	Endonuclease III	DNA-(Apurinic or apyrimidinic site) lyase	Endonuclease III	Endonuclease III	Endonuclease III	Endonuclease III	Endonuclease III	Endonuclease III	Putative endonuclease III	Endonuclease III	Endonuclease III	hypothetical endonuclease III	Endonuclease III	Endonuclease III	Endonuclease III	Endonuclease III	Endonuclease III	Nth	Endonuclease III	Endonuclease III	EndoIII-related endonuclease	Endonuclease III	Endonuclease III	Endonuclease III	

ECOLI01591	Tripeptide permease tppB	Tripeptide permease tppB	Tripeptide permease tppB	Proton/peptide symporter family protein	Putative proton dependent peptide transporter	Tripeptide permease tppB	Residues 1 to 500 of 500 are 99 pct identical to residues 1 to 500 of a 500 aa protein from Escherichia coli K12 ref: NP_416151.1 putative transport protein	Putative proton dependent peptide transporter	Probable peptide transporter protein	IPR000109: TGF-beta receptor, type I/II extracellular region; IPR000560: Histidine acid phosphatase; IPR005279: Amino acid/peptide transporter;IPR007114: Major facilitator superfamily putative POT family, peptide transport protein	similar to Salmonella typhi CT18 putative proton/oligopeptide symporter putative proton/oligopeptide symporter	POT family proton dependent peptide transporter	di-/tripeptide transporter	Similar to Q9KTB5 Proton/peptide symporter family protein from Vibrio cholerae (514 aa). FASTA: opt: 1329 Z-score: 1443.3 E(): 1.5e-72 Smith-Waterman score: 1329; 42.629identity in 502 aa overlap. ORF ftt0953c Proton-dependent oligopeptide transport (POT) family protein	Tripeptide permease tppB	Code: E; COG: COG3104 putative transport protein	Code: E; COG: COG3104 putative transport protein	Code: E; COG: COG3104 putative transport protein	Hypothetical transporter YdgR	Putative proton dependent peptide transporter	Proton-dependent oligopeptide transport (POT) family protein Similar to Q9KTB5 Proton/peptide symporter family protein from Vibrio cholerae (514 aa). FASTA: opt: 1329 Z-score: 1443.3 E(): 1.5e-72 Smith-Waterman score: 1329; 42.629identity in 502 aa overlap. ORF ftt0953c	Hypothetical transporter YdgR	transcript_id=ENSSTOT00000010068	Proton dependent peptide transporter	Putative proton dependent peptide transporter	putative transport protein Code: E; COG: COG3104	Proton dependent peptide transporter	proton-dependent oligopeptide transporter (POT) family protein, di-or tripeptide:H+ symporter	putative tripeptide transporter permease	
ECOLI01592	Glutathione S-transferase	Glutathione S-transferase	Glutathione S-transferase	Glutathione S-transferase GST-4.5	Glutathione S-transferase	Glutathione S-transferase	pseudo	Glutathione S-transferase	similar to SP:P81065, GB:J00117, GB:K03180, GB:K03187, GB:K03188, GB:K03189, GB:X00265, GB:X00266, GB:K03183, GB:K00092, GB:K03182, SP:P01229, SP:P01233, PID:1335012, PID:1335075, PID:180437, PID:180444, and PID:180453; identified by sequence similarity; putative glutathione S-transferase, putative	Glutathione S-transferase	Glutathione S-transferase	Glutathione S-transferase	Glutathione S-transferase	Glutathione S-transferase, putative	GLUTATHIONE S-TRANSFERASE	Glutathione S-transferase	glutathione S-transferase	Putative glutathionine S-transferase	Residues 1 to 201 of 201 are 98 pct identical to residues 1 to 201 of a 201 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288071.1 glutathionine S-transferase	Glutathione S-transferase	Glutathione S-transferase	glutathione S-transferase	conserved gene glutathione S-transferase	glutathione S-transferase	identified by similarity to SP:P39100; match to protein family HMM PF00043; match to protein family HMM PF02798 glutathione S-transferase	Glutathione S-transferase family protein	Glutathione S-transferase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark glutathione S-transferase	IPR004045: Glutathione S-transferase, N-terminal; IPR004046: Glutathione S-transferase, C-terminal glutathionine S-transferase	
ECOLI01593	Pyridoxamine kinase	Pyridoxamine kinase	similar to uniprot|P39988 Saccharomyces cerevisiae YEL029c;	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Putative pyridoxamine kinase	Pyridoxamine kinase	putative pyridoxine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Pyridoxamine kinase	Residues 1 to 287 of 287 are 99 pct identical to residues 1 to 287 of a 287 aa protein from Escherichia coli K12 ref: NP_416153.1 pyridoxal kinase 2 - pyridoxine kinase	Pyridoxamine kinase	Pyridoxamine kinase	IPR004625: Pyridoxal kinase pyridoxal kinase 2/pyridoxine kinase	similar to Salmonella typhi CT18 pyridoxamine kinase pyridoxamine kinase	Pyridoxamine kinase	pyridoxine kinase	, predicted protein, len = 303 aa, probably pyridoxine/pyridoxal/pyridoxamine kinase; predicted pI = 5.9071; good similarity to O15927, pyridoxine/pyridoxal/pyridoxamine kinase in Trypanosoma brucei; contains a weak pfam hit to a pfkB family carbohydrate kinase domain pyridoxal kinase, putative	Pyridoxal/pyridoxine/pyridoxamine kinase PdxK protein	
ECOLI01594	Tyrosyl-tRNA synthetase	Mitochondrial tyrosyl-tRNA synthetase.  [Source:SGD;Acc:S000006018]	similar to sp|P48527 Saccharomyces cerevisiae MSY1 Tyrosyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.  1) (Tyrosine--tRNA ligase) (TyrRS), start by similarity	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC576.06c]	similar to sp|P48527 Saccharomyces cerevisiae YPL097w MSY1 tyrosyl-tRNA synthetase singleton, hypothetical start	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	similar to uniprot|P48527 Saccharomyces cerevisiae YPL097w MSY1;	similar to GB:X53587, SP:P16144, PID:2270924, PID:2293523,  and PID:33951; identified by sequence similarity; putative tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase 1	Tyrosyl-tRNA synthetase 1	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase 1	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase 1	Tyrosyl-tRNA synthetase 1	
ECOLI01595	Pyridoxine/pyridoxamine 5'-phosphate oxidase	pyridoxamine 5'-phosphate oxidase;	Pyridoxine (pyridoxamine) phosphate oxidase, has homologs in E. coli and Myxococcus xanthus; transcription is under the general control of nitrogen metabolism.  [Source:SGD;Acc:S000000239]	similar to sp|P38075 Saccharomyces cerevisiae YBR035c PDX3 pyridoxamine-phosphate oxidase, start by similarity	Probable pyridoxamine 5'-phosphate oxidase [Source:GeneDB_Spombe;Acc:SPAC1093.02]	highly similar to sp|P38075 Saccharomyces cerevisiae YBR035c PDX3 pyridoxamine-phosphate oxidase singleton, start by similarity	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	highly similar to uniprot|P38075 Saccharomyces cerevisiae YBR035c PDX3;	DEHA2F17050p;similar to uniprot|P38075 Saccharomyces cerevisiae YBR035C PDX3 Pyridoxine (pyridoxamine) phosphate oxidase;	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	putative Pyridoxamine-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	Pyridoxine/pyridoxamine 5'-phosphate oxidase	
ECOLI01596	Uncharacterized protein ydhA	Hypothetical protein ydhA	Putative lipoprotein	Putative uncharacterized protein ydhA	Residues 1 to 82 of 82 are 100 pct identical to residues 1 to 82 of a 82 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288075.1 ydhA gene product	Putative lipoprotein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	Putative outer membrane lipoprotein	Code: R; COG: COG3895 conserved hypothetical protein	Code: R; COG: COG3895 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG3895; orf conserved hypothetical protein	Putative uncharacterized protein	Putative lipoprotein precursor	Putative uncharacterized protein ydhA	Lipoprotein precursor	Putative lipoprotein	conserved hypothetical protein Code: R; COG: COG3895	Lipoprotein precursor	conserved hypothetical protein	Lipoprotein	Putative uncharacterized protein ydhA	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein precursor	Predicted lipoprotein	Putative lipoprotein	
ECOLI01597	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	hypothetical molecular chaperone	Anhydro-N-acetylmuramic acid kinase	identified by match to protein family HMM PF03702 conserved hypothetical protein	similar to GP:15156940, and GP:15074672; identified by sequence similarity; putative conserved hypothetical protein	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Anhydro-N-acetylmuramic acid kinase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	
ECOLI01598	Outer membrane lipoprotein slyB	Lpp	Putative uncharacterized protein	Outer membrane lipoprotein slyB	Putative lipoprotein	Outer membrane lipoprotein slyB	Lipoprotein, putative	Putative lipoprotein	Putative lipoprotein	Outer membrane lipoprotein	Lipoprotein SlyB, putative	Putative lipoprotein	Outer membrane lipoprotein	Putative outer membrane lipoprotein Pcp	Outer membrane lipoprotein slyB	Probable peptidoglycan-associated lipoprotein	Residues 1 to 155 of 155 are 100 pct identical to residues 1 to 155 of a 155 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288077.1 putative outer membrane protein	Putative lipoprotein	Putative outer membrane lipoprotein transmembrane	Outer membrane lipoprotein SlyB	PAL cross-reacting lipoprotein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 outer membrane lipoprotein SlyB precursor outer membrane lipoprotein SlyB precursor	Putative uncharacterized protein	Putative lipoprotein	15 kDa lipoprotein; PAL cross-reacting lipoprotein; Similar to: HI1579, PCP_HAEIN Outer membrane lipoprotein PCP precursor	Outer membrane lipoprotein SlyB protein	Outer membrane lipoprotein, putative	
ECOLI01599	Transcriptional regulator slyA	Transcriptional regulator, MarR family	Putative MarR-family transcriptional regulator	Probable transcriptional regulator	Transcriptional regulator, MarR family	Transcriptional regulator slyA	Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Transcriptional regulator slyA	similar to GP:15074064, GB:D10653, GB:L10373, GB:D29808, SP:P41732, PID:285901, and PID:475006; identified by sequence similarity; putative transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Transcriptional regulator slyA	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Transcriptional regulator, MarR family	TRANSCRIPTIONAL REGULATOR, MARR FAMILY	Putative transcription regulator	Transcriptional regulator slyA	CDS_ID OB1198; MarR family transcriptional regulator	transcriptional regulator	Transcriptional regulator, MarR family	Residues 1 to 146 of 146 are 100 pct identical to residues 1 to 146 of a 146 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288078.1 transcriptional regulator for cryptic hemolysin	Transcriptional regulator slyA	Transcriptional regulator slyA	Transcriptional regulator slyA	Similar to transcriptional regulator, MarR family hypothetical protein	conserved gene transcriptional regulator MarR family	Similar to transcriptional regulator, MarR family hypothetical protein	
ECOLI01600	Uncharacterized protein ydhI	Hypothetical protein ydhI	Uncharacterized protein ydhI	Residues 1 to 78 of 78 are 98 pct identical to residues 1 to 78 of a 78 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288079.1 orf, conserved hypothetical protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydhI	conserved hypothetical protein identified by match to protein family HMM PF07869	Putative inner membrane protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydhI	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydhI	Putative uncharacterized protein	Conserved domain protein	Conserved domain protein	Conserved domain protein	Putative uncharacterized protein ydhI	
ECOLI01601	Uncharacterized protein ydhJ	Putative uncharacterized protein	Putative HlyD-family protein	Hypothetical protein ydhJ	Fusaric acid resistance protein, putative	Putative membrane protein	Putative FusE-MFP/HlyD family membrane fusion protein	Residues 1 to 288 of 288 are 98 pct identical to residues 12 to 299 of a 299 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288080.1 putative membrane protein	Similar to multidrug resistance protein A	Similar to multidrug resistance efflux pump hypothetical protein	drug transporter, putative	Hypothetical protein SE1933	conserved hypothetical protein	putative multidrug resistance efflux pump	similar to Salmonella typhi CT18 putative HlyD-family protein putative HlyD-family protein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2438 putative exported protein	conserved hypothetical protein	Fusaric acid resistance protein, putative	Putative multidrug resistance efflux pump	predicted secretion protein HlyD	Putative HlyD-family protein	hypothetical protein, similar to multidrug resistance protein A	identified by match to protein family HMM PF00529 HlyD family secretion protein	identified by match to protein family HMM PF00529 HlyD family secretion protein	Secretion protein HlyD	Similar to Bacillus subtilis hypothetical protein YhbJ TR:O31593 (EMBL:Z99108) (221 aa) fasta scores: E(): 7.9e-27, 45.02% id in 211 aa, and to the C-terminal region of Rhizobium etli putative transport protein RmrA TR:Q9KIH4 (EMBL:AF233286) (396 aa) fasta scores: E(): 9e-08, 30.5% id in 200 aa putative exported protein	Code: V; COG: COG1566 putative membrane protein	drug transporter, putative	
ECOLI01602	Uncharacterized transporter ydhK	Uncharacterized transporter ydhK	Hypothetical protein ydhK	Uncharacterized transporter ydhK	hypothetical protein	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1787933 (671 aa). BLAST with identity of 98% in 670 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	IPR002016: Haem peroxidase putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Uncharacterized conserved membrane protein	Uncharacterized transporter ydhK	Hypothetical membrane-spanning protein	Code: S; COG: COG1289 conserved hypothetical protein	Code: S; COG: COG1289 conserved hypothetical protein	Fusaric acid resistance protein conserved region	Fusaric acid resistance protein	Code: S; COG: COG1289; orf conserved hypothetical protein	Fusaric acid resistance protein conserved region	Putative membrane protein	Putative uncharacterized protein ydhK	Fusaric acid resistance protein conserved region PFAM: Fusaric acid resistance protein conserved region KEGG: bur:Bcep18194_B1263 fusaric acid resistance protein	Fusaric acid resistance protein conserved region PFAM: Fusaric acid resistance protein conserved region KEGG: bcn:Bcen_3787 fusaric acid resistance protein conserved region	hypothetical transport protein YdhK identified by match to protein family HMM PF04632	Putative exported protein precursor	conserved hypothetical protein Code: S; COG: COG1289	fusaric acid resistance efflux transporter,permease protein	conserved inner membrane protein	Fusaric acid resistance protein conserved region precursor	Fusaric acid resistance protein conserved region	Putative uncharacterized protein ydhK	
ECOLI01603	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	identified by match to protein family HMM PF00080 superoxide dismutase, Cu-Zn	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE SUPEROXIDE DISMUTASE CU-ZN PRECURSOR (BACTERIOCUPREIN) TRANSMEMBRANE PROTEIN	Superoxide dismutase	superoxide dismutase (Cu/Zn)	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase [Cu-Zn ] precursor	
ECOLI01604	Oxidoreductase ydhF	Aryl-alcohol dehydrogenase	Putative oxidoreductase	Oxidoreductase, aldo/keto reductase family	IolS protein	Oxidoreductase, aldo/keto reductase family	putative oxidoreductase, aldo/keto reductase 2	Hypothetical oxidoreductase ydhF	identified by match to protein family HMM PF00248 oxidoreductase, aldo/keto reductase family	Oxidoreductase, aldo/keto reductase 2 family	Oxidoreductase, aldo/keto reductase 2 family	Putative uncharacterized protein	aryl-alcohol dehydrogenase	Predicted oxidoreductase	Residues 1 to 298 of 298 are 98 pct identical to residues 1 to 298 of a 298 aa protein from Escherichia coli K12 ref: NP_416164.1 orf, conserved hypothetical protein	Putative aldo/keto reductase	Similar to oxidoreductase, aldo/keto reductase family	Oxidoreductase	IPR001395: Aldo/keto reductase putative aldo/keto reductase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	similar to aryl-alcohol dehydrogenase hypothetical protein	Putative aldo/keto reductase	Ortholog of S. aureus MRSA252 (BX571856) SAR0741 aldo/keto reductase family protein	hypothetical protein, similar to aryl-alcohol dehydrogenase	oxidoreductase	Aldo/keto reductases, related to diketogulonate reductase ARA1 protein	Putative aldo/keto reductase	identified by match to protein family HMM PF00248 oxidoreductase, aldo/keto reductase family	oxidoreductase, aldo/keto reductase family	
ECOLI01605	Uncharacterized protein ydhL	Putative uncharacterized protein	Hypothetical protein ydhL precursor	Putative uncharacterized protein VC1662	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1204	Putative uncharacterized protein	Predicted Fe-S protein	Putative uncharacterized protein	Similar to unknown protein	putative oxidoreductase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative oxidoreductase	identified by similarity to GB:AAN67077.1; match to protein family HMM PF06945 conserved hypothetical protein	identified by match to protein family HMM PF06945 conserved hypothetical protein	Protein of unknown function DUF1289	Code: R; COG: COG3313 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: R; COG: COG3313 conserved hypothetical protein	protein of unknown function DUF1289	conserved hypothetical protein	Protein of unknown function DUF1289	Code: R; COG: COG3313; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein ydhL	
ECOLI01606	Uncharacterized HTH-type transcriptional regulator ydhM	Probable transcriptional regulator	Transcriptional regulator	Putative TetR-family transcriptional regulator	TetR-family regulatory protein	Putative HTH-type transcriptional regulator ydhM	Transcriptional regulator, TetR family	glimmer prediction.  Contains similarity to Bacterial regulatory proteins, tetR family.  Similar to T37015 188 aa probable tetR-family transcription regulator - Streptomyces coelicolor. ACCESSION   T37015 Putative transcriptional regulator	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Putative transcriptional regulator	Putative uncharacterized protein	Transcriptional regulator	Residues 1 to 171 of 171 are 99 pct identical to residues 29 to 199 of a 199 aa protein from Escherichia coli K12 ref: NP_416166.1 orf, conserved hypothetical protein	TetR-family transcriptional regulatory protein	Probable transcription regulator protein	Probable transcriptional regulator, TetR family	Putative uncharacterized protein	Transcriptional regulator protein	putative transcriptional repressor (TetR/AcrR family)	similar to Salmonella typhi CT18 putative TetR-family transcriptional regulator putative TetR-family transcriptional regulator	TetR-family transcriptional regulatory protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pr : putative regulator putative transcriptional regulator (TetR/AcrR family)	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Putative TetR/AcrR family transcriptional repressor	identified by match to protein family HMM PF00440 transcriptional regulator, TetR family	regulatory protein, TetR	regulatory protein, TetR	
ECOLI01607	N-ethylmaleimide reductase	similar to sp|P41816 Saccharomyces cerevisiae NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3) YPL171c OYE3 isoform 3, start by similarity	highly similar to uniprot|Q03558 Saccharomyces cerevisiae YHR179w OYE2 NADPH dehydrogenase or uniprot|P41816 Saccharomyces cerevisiae YPL171c OYE3;	DEHA2A00132p;similar to uniprot|Q03558 Saccharomyces cerevisiae YHR179W NADPH dehydrogenase 2;	N-ethylmaleimide reductase	N-ethylmaleimide reductase	NADH:flavin oxidoreductase , NADH oxidase family protein	Putative uncharacterized protein nemA	Residues 1 to 365 of 365 are 99 pct identical to residues 1 to 365 of a 365 aa protein from Escherichia coli K12 ref: NP_416167.1 N-ethylmaleimide reductase	NADH:flavin oxidoreductase , NADH oxidase family protein	Probable flavoprotein nadh-dependent oxidoreductase	Flavoprotein NADH-dependent oxidoreductase	NADH-dependent flavin oxidoreductase	IPR000504: RNA-binding region RNP-1 (RNA recognition motif) N-ethylmaleimide reductase	similar to Salmonella typhi CT18 N-ethylmaleimide reductase N-ethylmaleimide reductase	NADH:flavin oxidoreductase , NADH oxidase family protein	N-ethylmaleimide reductase	N-ethylmaleimide reductase	go_function: NADPH dehydrogenase activity [goid 0003959] nADPh dehydrogenase 3	Code: C; COG: COG1902 N-ethylmaleimide reductase	NADH:flavin oxidoreductase/NADH oxidase	NADH:flavin oxidoreductase/NADH oxidase	NADH:flavin oxidoreductase/NADH oxidase	Code: C; COG: COG1902 N-ethylmaleimide reductase	N-ethylmaleimide reductase	NADH:flavin oxidoreductase	NADH:flavin oxidoreductase/NADH oxidase	N-ethylmaleimide reductase	NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase KEGG: neu:NE2510 NADH:flavin oxidoreductase/NADH oxidase	
ECOLI01608	Lactoylglutathione lyase	Probable lactoylglutathione lyase	Lactoylglutathione lyase	Lactoylglutathione lyase	LACTOYLGLUTATHIONE LYASE	Lactoylglutathione lyase	GloA	Lactoylglutathione lyase	Lactoylglutathione lyase	Lactoylglutathione lyase	Lactoylglutathione lyase	Lactoylglutathione lyase	putative lactoylglutathione lyase	Lactoylglutathione lyase	lactoylglutathione lyase	Lactoylglutathione lyase	Probable lactoylglutathione lyase	Lactoylglutathione lyase	Lactoylglutathione lyase	Lactoylglutathione lyase	Lactoylglutathione lyase	Lactoylglutathione lyase	lactoylglutathione lyase	Lactoylglutathione lyase	Probable lactoylglutathione lyase	Lactoylglutathione lyase	Lactoylglutathione lyase	Residues 1 to 135 of 135 are 100 pct identical to residues 1 to 135 of a 135 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288087.1 gloA gene product	Lactoylglutathione lyase	
ECOLI01609	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	putative ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Ribonuclease T	Residues 1 to 215 of 215 are 100 pct identical to residues 1 to 215 of a 215 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288088.1 RNase T, degrades tRNA	Ribonuclease T	Ribonuclease T	Ribonuclease T	ribonuclease T	conserved gene ribonuclease T	ribonuclease T	Ribonuclease T	Ribonuclease T	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ribonuclease T	
ECOLI01610	Probable ATP-dependent helicase lhr	ATP-dependent helicase II	Lhr-like helicases	Probable ATP-dependent helicase	ATP-dependent DNA helicase	Putative ATP-dependent DNA helicase	Putative ATP-dependent helicase	Member of ATP-dependent helicase superfamily II	similar to AE007148-9|AAK47738.1| percent identity: 50 in 1489 aa putative ATP-dependent DNA helicase	SC7C7.16c, probable ATP dependent DNA helicase, len: 1690 aa; highly similar to e.g. LHR_ECOLI probable atp-dependent helicase lhr (EC 3.6.1.-) (1538 aa), fasta scores; opt: 2361 z-score: 3018.1 E(): 0, 48.6% identity in 1435 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and Pfam matches to entry DEAD PF00270, DEAD and DEAH box helicases, score 30.04 and to entry helicase_C PF00271, Helicases conserved C-terminal domain, score 42.17 putative ATP-dependent DNA helicase	similar to Escherichia coli K12 member of ATP-dependent helicase superfamily II gi: 1787942 (1539 aa). BLAST with identity of 98% in 1486 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Lhr	ATP-dependent helicase, putative	Mb3324, lhr, len: 1513 aa. Equivalent to Rv3296, len: 1512 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 1512 aa overlap). Probable lhr, ATP-dependent helicase (EC 3.6.1.-), similar to others e.g. P30015|LHR_ECOLI|RHLF|B1653 from Escherichia coli stain K12 (1538 aa), FASTA scores: opt: 2930, E(): 1.5e-159, (47.55% identity in 1569 aa overlap); AAG56642|LHR from Escherichia coli stain O157:H7 EDL933 (1538 aa), FASTA scores: opt: 2930, E(): 1.5e-159, (47.6% identity in 1561 aa overlap); O86821|SC7C7.16c from Streptomyces coelicolor (1690 aa), FASTA scores: opt: 2919, E(): 7e-159, (53.55% identity in 1703 aa overlap); Q9HYW9|PA3272 from Pseudomonas aeruginosa (1448 aa), FASTA scores: opt: 907, E(): 6.2e-44, (35.85% identity in 1512 aa overlap); etc. SIMILAR TO DEAD/DEAH BOX HELICASE FAMILY AND TO HELICASE C-TERMINAL DOMAIN. Contains PS00017 ATP/GTP-binding site motif A and possible helix-turn-helix motif. PROBABLE ATP-DEPENDENT HELICASE LHR (LARGE HELICASE-RELATED PROTEIN)	putative ATP-dependent DNA helicase	Code: R; COG: COG1201 member of ATP-dependent helicase superfamily II	DEAD/DEAH box helicase-like	Lhr-like helicase COG1201	DEAD/DEAH box helicase-like	hypothetical protein similarity to COG1201 Lhr-like helicases(Evalue: 1E-168)	DEAD/H associated	DEAD/H associated domain protein PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein SMART: DEAD-like helicases-like KEGG: aba:Acid345_0384 DEAD/DEAH box helicase-like	DEAD/DEAH box helicase identified by match to protein family HMM PF00270; match to protein family HMM PF00271	DEAD/H associated domain protein	ATP-dependent helicase II Orthologue of b1653_BL1432	DEAD/H associated domain protein PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein SMART: AAA ATPase KEGG: nfa:nfa9760 putative ATP-dependent DNA helicase	DEAD/H associated domain protein PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein SMART: AAA ATPase KEGG: fra:Francci3_3527 DEAD/DEAH box helicase-like	DEAD/H associated domain protein PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein SMART: DEAD-like helicases-like KEGG: mmc:Mmcs_1267 DEAD/H associated	ATP-dependent helicase lhr Mapped to H37Rv Rv3296	
ECOLI01611	Glutaredoxin-4	Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase; mitochondrial matrix protein involved in the synthesis/assembly of iron-sulfur centers; monothiol glutaredoxin subfamily member along with Grx3p and Grx4p. [Source:SGD;Acc:S000005980]	similar to wi|NCU04098.1 Neurospora crassa NCU04098.  1, probable glutaredoxin, start by similarity	Glutaredoxin-related protein	similar to sp|Q02784 Saccharomyces cerevisiae YPL059w GRX5 member of the subfamily of yeast glutaredoxins (Grx3, GRX4, and Grx5), start by similarity	Putative uncharacterized protein	Uncharacterized monothiol glutaredoxin ycf64-like	Putative uncharacterized protein	Glutaredoxin-4	similar to uniprot|Q02784 Saccharomyces cerevisiae YPL059w GRX5;	Vng0450c	DEHA2F25476p;similar to uniprot|Q02784 Saccharomyces cerevisiae YPL059W GRX5 Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase;	Glutaredoxin-like protein	Glutaredoxin-related protein	Glutaredoxin-related protein	Probable monothiol glutaredoxin-2	Putative uncharacterized protein	Glutaredoxin-4	Putative uncharacterized protein	Glutaredoxin-related protein	Putative uncharacterized protein	Glutaredoxin-related protein	Putative uncharacterized protein STY1689	Alr0799 protein	Putative uncharacterized protein	Glutaredoxin-related protein	putative glutaredoxin-related protein	GrlA protein	Probable monothiol glutaredoxin ydhD	

ECOLI01612	Uncharacterized protein ydhO	Putative secreted protein	Lmo0394 protein	Hypothetical protein ydhO	Putative lipoprotein	SCD16A.22, possible NLP/P60 family protein, len: 277aa; similar to many eg. TR:CAB39862 (EMBL:AL049497) putative secreted protein from Streptomyces coelicolor (338 aa) fasta scores; opt: 386, z-score: 364.3, E(): 5.8e-13, (35.1% identity in 251 aa overlap) and the C-terminal half of many Listeria spp. extracellular proteins eg. SW:P60_LISIN P60 Listeria innocua (481 aa) fasta scores; opt: , z-score: 328.5, E(): 5.7e-11, (28.9% identity in 242 aa overlap). Contains Pfam match to entry PF00877 NLPC_P60, NLP/P60 family. Also contains coiled-coil region at 92-125aa and possible hydrophobic membrane spanning region putative NLP/P60 family protein	Lin0412 protein	Residues 2 to 204 of 204 are 99 pct identical to residues 46 to 248 of a 248 aa protein from Escherichia coli dbj: BAA15421.1 chitinase 3 precursor	Putative exported protein	Extracellular protein, gamma-D-glutamate-meso- diaminopimelate muropeptidase	Putative uncharacterized protein	cell wall-associated hydrolase	IPR000064: NLP/P60 putative cell wall-associated hydrolase	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative exported protein	identified by match to protein family HMM PF00877 NLP/P60 family protein	Putative cell wall-associated hydrolase	Code: M; COG: COG0791 putative lipoprotein	Code: M; COG: COG0791 putative lipoprotein	Code: M; COG: COG0791 putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Hypothetical protein precursor	Putative exported protein precursor	Complete genome	putative lipoprotein Code: M; COG: COG0791	Hypothetical protein precursor	Cell wall-associated hydrolase	Putative uncharacterized protein	
ECOLI01613	Superoxide dismutase	Fe-superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	putative superoxide dismutase	Superoxide dismutase	Superoxide dismutase	similar to GP:5163197; identified by sequence similarity; putative superoxide dismutase, Fe-Mn family	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE SUPEROXIDE DISMUTASE FE PROTEIN	Superoxide dismutase	
ECOLI01614	Inner membrane transport protein ydhP	Putative transmembrane efflux protein	Hypothetical transport protein ydhP	pseudo	Putative membrane protein	Putative membrane protein	Inner membrane transport protein ydhP	SC1G2.16c.possible transmembrane efflux protein, len: 413 aa. Highly similar to many transmembrane transport proteins e.g. Streptomyces lividans SW:CMLR_STRLI(EMBL:X59968) chloramphenicol resistance protein CmlR (392 aa), fasta scores opt: 743 z-score: 769.2 E():0 35.8% identity in 377 aa overlap and Streptomyces coelicolor TR:Q9X8V1(EMBL:AL049826) putative transmembrane efflux protein SCH24.37 (404 aa), fasta scores opt: 1313 z-score: 1352.1 E(): 0 52.0% identity in 408 aa overlap. Contains a Pfam match to entry PF00083 sugar_tr, Sugar (and other) transporter and multiple possible membrane spanning hydrophobic domains. putative transmembrane efflux protein.	Residues 1 to 389 of 389 are 99 pct identical to residues 1 to 389 of a 389 aa protein from Escherichia coli K12 ref: NP_416174.1 putative transport protein	transporter, putative	Chloramphenicol resistance protein YfhI	Permease protein	similar to antibiotic resistance protein putative transporter	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transport protein (MFS superfamily)	Major facilitator family transporter	Putative transmembrane efflux protein	similar to unknown protein	Code: G; COG: COG2814 putative transport protein	Code: G; COG: COG2814 putative transport protein	Major facilitator superfamily (MFS_1) transporter	Code: G; COG: COG2814 putative transport protein	Major facilitator superfamily MFS_1 precursor	Putative transport transmembrane protein	hypothetical protein similarity to COG0477 Permeases of the major facilitator superfamily(Evalue: 2E-22)	major facilitator superfamily MFS_1	Putative transport protein	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: bur:Bcep18194_A4398 major facilitator superfamily (MFS_1) transporter	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: bcn:Bcen_0774 major facilitator superfamily MFS_1	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: lxx:Lxx17780 ABC transporter, permease protein	
ECOLI01617	Uncharacterized HTH-type transcriptional regulator ydhB	Putative transcriptional regulator	Hypothetical transcriptional regulator, LysR family	Hypothetical transcriptional regulator ydhB	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Uncharacterized HTH-type transcriptional regulator ydhB	Transcriptional regulator	Residues 1 to 310 of 313 are 99 pct identical to residues 1 to 310 of a 310 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288095.1 putative transcriptional regulator LYSR-type	LysR-family transcriptional regulatory protein	Similar to LysR-family transcriptional regulatory YdhB of Escherichia coli	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	LysR-family transcriptional regulatory protein	transcriptional regulator	Putative LysR family transcriptional regulator	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	transcriptional regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Putative transcriptional regulator, LysR family	LysR, substrate-binding	Transcriptional regulator, LysR family	LysR-family transcriptional regulatory protein	Putative transcriptional regulator LYSR-type	Transcriptional regulator, LysR family precursor	LysR-family transcriptional regulatory protein	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: she:Shewmr4_1974 transcriptional regulator, LysR family	
ECOLI01616	HTH-type transcriptional repressor purR	HTH-type transcriptional repressor purR	HTH-type transcriptional repressor purR	HTH-type transcriptional repressor purR	Residues 1 to 289 of 311 are 100 pct identical to residues 1 to 289 of a 341 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288094.1 transcriptional repressor for pur regulon, glyA, glnB, prsA, speA	HTH-type transcriptional repressor purR	HTH-type transcriptional repressor purR	IPR000843: Bacterial regulatory protein LacI, HTH motif transcriptional repressor for pur regulon, glyA, glnB, prsA, speA (GalR/LacI family)	similar to Salmonella typhi CT18 purine nucleotide synthesis repressor purine nucleotide synthesis repressor	HTH-type transcriptional repressor purR	HTH-type transcriptional repressor purR	Code: K; COG: COG1609 transcriptional repressor for pur regulon, glyA, glnB, prsA, speA	transcriptional repressor for pur regulon, glyA, glnB, prsA, speA; Code: K; COG: COG1609 PurR	transcriptional repressor for pur regulon, glyA, glnB, prsA, speA; Code: K; COG: COG1609 PurR	HTH-type transcriptional repressor purR	Purine nucleotide synthesis repressor	HTH-type transcriptional repressor purR	Purine nucleotide synthesis repressor	Purine nucleotide synthesis repressor	Purine nucleotide synthesis repressor Code: K; COG: COG1609	Purine nucleotide synthesis repressor	purine nucleotide synthesis repressor	Transcriptional regulator, LacI family	Transcriptional repressor for de novo purine nucleotide synthesis	Putative uncharacterized protein	Transcriptional repressor PurR	Transcriptional regulator, LacI family	Purine nucleotide synthesis repressor	Transcriptional repressor PurR	
ECOLI01618	Inner membrane transport protein ydhC	Putative integral membrane transport protein	Hypothetical transport protein	Hypothetical transport protein ydhC	Putative transport protein	Multidrug resistance protein	Residues 1 to 403 of 403 are 96 pct identical to residues 1 to 403 of a 403 aa protein from Escherichia coli dbj: BAA15426.1 Bicyclomycin resistance protein (Sulfonamide resistance protein).	Putative drug resistance protein	Similar to hypothetical transport protein YdhC of Escherichia coli	IPR007114: Major facilitator superfamily putative MFS family transport protein	similar to Salmonella typhi CT18 putative integral membrane transport protein putative integral membrane transport protein	Putative MFS Superfamily multidrug efflux pump	bicyclomycin resistance protein	Putative MFS family transport protein	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Hypothetical transport protein YdhC	Drug resistance transporter, Bcr/CflA subfamily precursor	Putative drug resistance protein precursor	Hypothetical transport protein YdhC	Drug resistance protein precursor	drug resistance transporter, Bcr/CflA subfamily TIGRFAM: drug resistance transporter, Bcr/CflA subfamily PFAM: major facilitator superfamily MFS_1 KEGG: she:Shewmr4_1975 drug resistance transporter, Bcr/CflA subfamily	Putative drug resistance protein precursor	putative transport protein Code: GEPR; COG: COG0477	Drug resistance protein precursor	Drug resistance transporter, Bcr/CflA subfamily precursor	putative transporter	Botrytis cinerea hypothetical protein	
ECOLI01619	Cyclopropane-fatty-acyl-phospholipid synthase	Cyclopropane-fatty-acyl-phospholipid synthase	Cyclopropane-fatty-acyl-phospholipid synthase	Cyclopropane-fatty-acyl-phospholipid synthase	Mycolic acid synthase	hypothetical cyclopropane-fatty-acyl-phospholipid synthase protein	Cyclopropane-fatty-acyl-phospholipid synthase	Cyclopropane-fatty-acyl-phospholipid synthase	Cyclopropane fatty acid synthase	Cyclopropane fatty acyl phospholipid synthase	Cyclopropane fatty acid synthase	Residues 1 to 382 of 382 are 99 pct identical to residues 1 to 382 of a 382 aa protein from Escherichia coli K12 ref: NP_416178.1 cyclopropane fatty acyl phospholipid synthase	Cyclopropane-fatty-acyl-phospholipid synthase	Probable cyclopropane-fatty-acyl-phospholipid synthase protein	Cyclopropane-fatty-acyl-phospholipid synthase	cyclopropane fatty acyl phospholipid synthase (Cyclopropane fatty acid synthase) (CFA synthase)	conserved gene cyclopropane fatty acid synthase	cyclopropane fatty acyl phospholipid synthase (Cyclopropane fatty acid synthase) (CFA synthase)	Cyclopropane-fatty-acyl-phospholipid synthase	cyclopropane-fatty-acyl-phospholipid synthase	Cyclopropane-fatty-acyl-phospholipid synthase protein	IPR000051: SAM (and some other nucleotide) binding motif; IPR001601: Generic methyltransferase cyclopropane fatty acyl phospholipid synthase	similar to Salmonella typhi CT18 cyclopropane-fatty-acyl-phospholipid synthase cyclopropane-fatty-acyl-phospholipid synthase	Putative uncharacterized protein gbs1792	CYCLOPOCYCLOPROPANE FATTY ACID SYNTHASE	identified by match to PFAM protein family HMM PF02353 cyclopropane-fatty-acyl-phospholipid synthase	Cyclopropane-fatty-acyl-phospholipid synthase	Cyclopropane-fatty-acyl-phospholipid synthase	methyltransferases; COG2230 cyclopropane fatty acid synthase	
ECOLI01620	Riboflavin synthase alpha chain	identified by match to PFAM protein family HMM PF00677 riboflavin synthase, alpha subunit	Riboflavin synthase, alpha subunit	RibE	Riboflavin synthase alpha chain	Riboflavin synthase alpha chain	putative riboflavin synthase, alpha chain	Riboflavin synthase alpha chain	Riboflavin synthase alpha chain	Riboflavin synthase, alpha subunit	Riboflavin synthase alpha chain	Riboflavin synthase alpha chain	Riboflavin synthase, alpha subunit	Riboflavin synthase alpha chain	Riboflavin synthase alpha chain	Riboflavin synthase alpha chain	Riboflavin synthase, alpha chain	Riboflavin synthase, alpha chain	Riboflavin synthase alpha chain	Riboflavin synthase alpha chain	Residues 1 to 213 of 213 are 100 pct identical to residues 1 to 213 of a 213 aa protein from Escherichia coli K12 ref: NP_416179.1 riboflavin synthase, alpha chain	Riboflavin synthase alpha chain	Riboflavin synthase alpha chain	RibE protein	Riboflavin synthase alpha chain	Riboflavin synthase, alpha chain	Riboflavin synthase alpha chain	IPR001783: Lumazine-binding protein riboflavin synthase, alpha chain	similar to Salmonella typhi CT18 riboflavin synthase alpha chain riboflavin synthase alpha chain	
ECOLI01621	Multidrug resistance protein mdtK	Probable multidrug resistance protein norM	Multidrug resistance protein hmrM	Probable multidrug resistance protein norM	Probable multidrug resistance protein norM	Multidrug resistance protein pmpM	Multidrug resistance protein norM	Multidrug resistance protein mdtK	Probable multidrug resistance protein norM	Probable multidrug resistance protein norM	Probable multidrug resistance protein norM	putative multidrug resistance protein NorM(Na+/drug antiporter)	Multidrug resistance protein mdtK	Multidrug resistance protein norM	Multidrug resistance protein	Multidrug resistance protein	Probable multidrug resistance protein norM	Multidrug resistance protein mdtK	hypothetical conserved protein	Multidrug resistance protein norM	Multidrug resistance protein mdtK	CDS_ID OB1092; Na(+):drug antiporter multidrug resistance protein	Probable multidrug resistance protein norM	Multidrug resistance protein norM	Multidrug resistance protein mdtK	Multidrug resistance protein mdtK	Biological Process: multidrug transport (GO:0006855), Molecular Function: drug transporter activity (GO:0015238), Molecular Function: antiporter activity (GO:0015297), Cellular Component: membrane (GO:0016020) putative multidrug resistance protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark multidrug efflux protein	IPR002528: Multi antimicrobial extrusion protein MatE putative MATE family transport protein	
ECOLI01622	Uncharacterized protein ydhQ	Uncharacterized protein ydhQ	Residues 1 to 418 of 418 are 98 pct identical to residues 1 to 418 of a 418 aa protein from Escherichia coli K12 ref: NP_416181.1 possible enzyme	Code: MU; COG: COG3468 possible enzyme	Code: MU; COG: COG3468 possible enzyme	Code: MU; COG: COG3468 possible enzyme	Putative uncharacterized protein	Putative uncharacterized protein ydhQ	possible enzyme Code: MU; COG: COG3468	putative adhesin AidA	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative enzyme	Putative uncharacterized protein	Putative uncharacterized protein	Hemolysin-type calcium-binding region protein	Putative uncharacterized protein	Putative adhesin	Putative uncharacterized protein ydhQ	Putative uncharacterized protein ydhQ	Putative uncharacterized protein ydhQ	Putative uncharacterized protein ydhQ	Putative uncharacterized protein ydhQ	Predicted protein	Putative uncharacterized protein ydhQ	YdhQ protein	Conserved protein	Conserved protein	
ECOLI01623	Protein ydhR	Putative uncharacterized protein STY4337	Putative uncharacterized protein	Protein ydhR	Putative uncharacterized protein	conserved hypothetical protein	Protein ydhR	Putative uncharacterized protein VPA1606	Putative uncharacterized protein	similar to AE005390-1|AAG56654.1| percent identity: 47 in 100 aa conserved hypothetical protein	Residues 1 to 101 of 101 are 100 pct identical to residues 1 to 101 of a 101 aa protein from Escherichia coli K12 ref: NP_416182.1 orf, conserved hypothetical protein	Putative uncharacterized protein	identified by similarity to PIR:AH0077 conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	similar to gi|50427139|ref|XP_462181.1| [Debaryomyces hansenii], percent identity 57 in 97 aa, BLASTP E(): 3e-27 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	conserved hypothetical protein	Protein YdhR	Hypothetical protein	hypothetical protein	Putative uncharacterized protein	Hypothetical protein	conserved hypothetical protein Conserved hypothetical protein. Homology to CE0355 of C.efficiens of 56% (trembl:Q8FSM8). No domains predicted. No THs. No signal peptide.	putative mono-oxygenase	
ECOLI01624	Uncharacterized protein ydhS	Putative uncharacterized protein	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1787957 (535 aa). BLAST with identity of 98% in 474 aa. This CDS contains deletion. The sequence has been checked and is believed to be correct. pseudo	Code: S; COG: COG4529 conserved hypothetical protein	similar to hypothetical protein in Escherichia coli K-12. No evidence to support Mitochondrial substrate carrier. Conserved Hypothetical protein	Code: S; COG: COG4529 conserved hypothetical protein	Code: S; COG: COG4529; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ydhS	conserved hypothetical protein	FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase KEGG: rsp:RSP_3137 hypothetical protein	conserved hypothetical protein Code: S; COG: COG4529	FAD dependent oxidoreductase	Putative oxidoreductase	Conserved protein with FAD/NAD(P)-binding domain	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein	FAD-dependent oxidoreductase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydhS	Putative uncharacterized protein ydhS	Putative uncharacterized protein ydhS	Putative uncharacterized protein ydhS	Putative uncharacterized protein ydhS	FAD dependent oxidoreductase	Conserved protein with FAD/NAD(P)-binding domain	
ECOLI01625	Uncharacterized protein ydhT	Putative uncharacterized protein	Residues 1 to 270 of 270 are 98 pct identical to residues 1 to 270 of a 270 aa protein from Escherichia coli K12 ref: NP_416184.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydhT	conserved hypothetical protein	conserved hypothetical protein YdhT	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative subunit of oxidoreductase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydhT	Putative uncharacterized protein ydhT	Putative uncharacterized protein ydhT	Putative uncharacterized protein ydhT	Putative uncharacterized protein ydhT	Predicted protein	Putative uncharacterized protein ydhT	YdhT protein	Conserved protein	
ECOLI01626	Protein phsC homolog	PhsC protein homolog	Putative uncharacterized protein ydhU	Residues 1 to 261 of 261 are 99 pct identical to residues 1 to 261 of a 261 aa protein from Escherichia coli K12 ref: NP_416185.1 orf, conserved hypothetical protein	Code: C; COG: COG4117 conserved hypothetical protein	Putative uncharacterized protein	Code: C; COG: COG4117 conserved hypothetical protein	Cytochrome B561	Code: C; COG: COG4117; orf conserved hypothetical protein	PhsC-like protein	YdhU (PhsC)-like protein	cytochrome B561	cytochrome b561 KEGG: gme:Gmet_2929 cytochrome b561	conserved hypothetical protein Code: C; COG: COG4117	putative cytochrome	Cytochrome B561	Nickel-dependent hydrogenase, b-type cytochrome subunit	Predicted cytochrome	Nickel-dependent hydrogenase, b-type cytochrome subunit	Cytochrome B561	Nickel-dependent hydrogenase, b-type cytochrome subunit	Putative uncharacterized protein	Nickel-dependent hydrogenase, b-type cytochrome subunit	Putative oxidoreductase, cytochrome b subunit	Nickel-dependent hydrogenase, b-type cytochrome subunit	Cytochrome B561	Putative uncharacterized protein	Putative cytochrome b subunit of a reductase	Putative cytochrome b subunit of a reductase	
ECOLI01627	Uncharacterized ferredoxin-like protein ydhX	Putative ferredoxin-like protein ydhX	Molybdopterin oxidoreductase, iron-sulfur cluster -binding subunit, putative	Formate-dependent nitrite reductase, nrfC protein	Uncharacterized ferredoxin-like protein ydhX	Residues 1 to 239 of 239 are 98 pct identical to residues 1 to 239 of a 239 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288105.1 putative oxidoreductase, Fe-S subunit	Code: C; COG: COG0437 putative oxidoreductase, Fe-S subunit	Code: C; COG: COG0437 putative oxidoreductase, Fe-S subunit	DMSO reductase chain B	Code: C; COG: COG0437 putative oxidoreductase, Fe-S subunit	Putative ferredoxin-like protein YdhX	Putative oxidoreductase Fe-S subunit	4Fe-4S ferredoxin, iron-sulfur binding domain protein	putative oxidoreductase, Fe-S subunit Code: C; COG: COG0437	4Fe-4S ferredoxin, iron-sulfur binding domain protein precursor	putative oxidoreductase Fe-S subunit	KEGG: she:Shewmr4_3763 twin-arginine translocation pathway signal twin-arginine translocation pathway signal	Iron-sulfur cluster-binding protein	Predicted 4Fe-4S ferridoxin-type protein	AnaeroBic dimethyl sulfoxide reductase chain b	Iron-sulfur cluster-binding protein	4Fe-4S ferredoxin iron-sulfur binding domain protein precursor	Iron-sulfur cluster-binding protein	Putative uncharacterized protein	Iron-sulfur cluster-binding protein	Putative oxidoreductase, Fe-S subunit	Iron-sulfur cluster-binding protein	Putative oxidoreductase Fe-S subunit	Putative 4Fe-4S ferridoxin-type subunit of oxidoreductase	
ECOLI01628	Uncharacterized protein ydhW	Putative uncharacterized protein	Residues 1 to 215 of 215 are 98 pct identical to residues 1 to 215 of a 215 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288106.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydhW	conserved hypothetical protein	hypothetical protein KEGG: eci:UTI89_C1864 hypothetical protein YdhW	conserved hypothetical protein YdhW	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative subunit of oxidoreductase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydhW	Putative uncharacterized protein ydhW	Putative uncharacterized protein ydhW	Putative uncharacterized protein ydhW	Putative uncharacterized protein ydhW	Predicted protein	Putative uncharacterized protein ydhW	
ECOLI01629	Uncharacterized protein ydhV	Hypothetical protein ydhV	Putative uncharacterized protein	Residues 1 to 598 of 598 are 99 pct identical to residues 103 to 700 of a 700 aa protein from Escherichia coli K12 ref: NP_416188.1 orf, conserved hypothetical protein	Code: C; COG: COG2414 conserved hypothetical protein	Code: C; COG: COG2414 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydhV	Aldehyde ferredoxin oxidoreductase	conserved hypothetical protein Code: C; COG: COG2414	Aldehyde ferredoxin oxidoreductase PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like KEGG: ecj:JW5272 predicted oxidoreductase	Aldehyde ferredoxin oxidoreductase PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like KEGG: ecj:JW5272 predicted oxidoreductase	Aldehyde ferredoxin oxidoreductase	putative oxidoreductase	Aldehyde ferredoxin oxidoreductase	Aldehyde ferredoxin oxidoreductase	Aldehyde ferredoxin oxidoreductase	PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase KEGG: shw:Sputw3181_2975 aldehyde ferredoxin oxidoreductase Aldehyde ferredoxin oxidoreductase	Aldehyde ferredoxin oxidoreductase	Aldehyde ferredoxin oxidoreductase	Predicted oxidoreductase	Aldehyde ferredoxin oxidoreductase	Aldehyde ferredoxin oxidoreductase	Aldehyde ferredoxin oxidoreductase	Aldehyde ferredoxin oxidoreductase	Putative uncharacterized protein	Aldehyde ferredoxin oxidoreductase	Putative aldehyde ferredoxin oxidoreductase	Aldehyde ferredoxin oxidoreductase	
ECOLI01630	Uncharacterized ferredoxin-like protein ydhY	Iron-sulfur cluster binding protein	Putative ferredoxin-like protein ydhY	Uncharacterized ferredoxin-like protein ydhY	Residues 1 to 208 of 208 are 100 pct identical to residues 1 to 208 of a 208 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288108.1 putative oxidoreductase, Fe-S subunit	Code: C; COG: COG0437 putative oxidoreductase, Fe-S subunit	Code: C; COG: COG0437 putative oxidoreductase, Fe-S subunit	Putative ferredoxin-like protein YdhY	Putative ferredoxin-like protein YdhY	4Fe-4S ferredoxin, iron-sulfur binding	putative oxidoreductase, Fe-S subunit Code: C; COG: COG0437	putative ferredoxin-like protein YdhY	4Fe-4S ferredoxin, iron-sulfur binding domain protein	4Fe-4S ferredoxin iron-sulfur binding domain protein	Iron-sulfur cluster-binding protein	Predicted 4Fe-4S ferridoxin-type protein	4Fe-4S ferredoxin iron-sulfur binding domain protein precursor	Iron-sulfur cluster-binding protein	4Fe-4S ferredoxin iron-sulfur binding domain protein	Iron-sulfur cluster-binding protein	Putative 4Fe-4S cluster-binding protein	Putative uncharacterized protein	Putative oxidoreductase, Fe-S subunit	Iron-sulfur cluster-binding protein	Putative oxidoreductase Fe-S subunit	Putative 4Fe-4S ferridoxin-type subunit of oxidoreductase	Putative 4Fe-4S ferridoxin-type subunit of oxidoreductase	Putative 4Fe-4S ferridoxin-type subunit of oxidoreductase	Putative 4Fe-4S ferridoxin-type subunit of oxidoreductase	
ECOLI01631	Uncharacterized protein ydhZ	Hypothetical protein ydhZ	Uncharacterized protein ydhZ	Residues 1 to 69 of 69 are 100 pct identical to residues 1 to 69 of a 69 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288109.1 orf, conserved hypothetical protein	orf70 putative cytoplasmic protein	similar to Salmonella typhi Ty2 conserved hypothetical protein conserved hypothetical protein	Uncharacterized protein ydhZ	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydhZ	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydhZ	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Pathogenicity island protein	
ECOLI01632	Pyruvate kinase I	pyruvate kinase;	Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration. [Source:SGD;Acc:S000000036]	sp|P30614 Yarrowia lipolytica Pyruvate kinase, hypothetical start	Pyruvate kinase [Source:GeneDB_Spombe;Acc:SPAC4H3.10c]	gi|28565038|gb|AAO32602.1 Kluyveromyces lactis CDC19, start by similarity	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase 2	PYRUVATE KINASE;09_0640, PYRUVATE KINASE, KPYK_YARLI, (uncertain position of initiation ATG codon), gene found by Glimmer;	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	DEHA2D11044p;highly similar to uniprot|P00549 Saccharomyces cerevisiae YAL038W CDC19 Pyruvate kinase or uniprot|P52489 Saccharomyces cerevisiae YOR347C PYK2 Pyruvate kinase;	Pyruvate kinase	Pyruvate kinase	identified by match to PFAM protein family HMM PF02887 pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	
ECOLI01633	Major outer membrane lipoprotein	putative lipoprotein	Major outer membrane lipoprotein precursor	Major outer membrane lipoprotein, putative	Major outer membrane lipoprotein	Outer membrane lipoprotein	Major outer membrane lipoprotein	Residues 1 to 78 of 78 are 100 pct identical to residues 1 to 78 of a 78 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288111.1 murein lipoprotein	Major outer membrane lipoprotein	Lpp protein	Major outer membrane lipoprotein	similar to Salmonella typhi Ty2 major outer membrane lipoprotein major outer membrane lipoprotein	Major outer membrane lipoprotein	Code: M; COG: COG4238 murein lipoprotein	Code: M; COG: COG4238 murein lipoprotein	major outer membrane lipoprotein	Code: M; COG: COG4238 murein lipoprotein	Major outer membrane lipoprotein	Major outer membrane lipoprotein, putative precursor	Major outer membrane lipoprotein, putative precursor	Major outer membrane lipoprotein precursor	Major outer membrane lipoprotein, putative precursor	Murein lipoprotein	major outer membrane lipoprotein identified by similarity to SP:P02937	Hypothetical protein	major outer membrane lipoprotein, putative KEGG: son:SO1295 major outer membrane lipoprotein, putative	Major outer membrane lipoprotein precursor	Outer membrane lipoprotein	major outer membrane lipoprotein, putative KEGG: son:SO1295 major outer membrane lipoprotein, putative	
ECOLI01634	Uncharacterized protein ynhG	Putative uncharacterized protein VPA1470	Putative uncharacterized protein ynhG	Residues 1 to 334 of 334 are 99 pct identical to residues 1 to 334 of a 334 aa protein from Escherichia coli K12 ref: NP_416193.1 orf, conserved hypothetical protein	putative LysM domain	similar to Salmonella typhimurium putative LysM domain putative LysM domain	Putative LysM domain protein	Code: S; COG: COG1376 conserved hypothetical protein	Code: S; COG: COG1376 conserved hypothetical protein	ErfK/YbiS/YcfS/YnhG	Code: S; COG: COG1376; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ynhG	ErfK/YbiS/YcfS/YnhG family protein PFAM: ErfK/YbiS/YcfS/YnhG family protein KEGG: pau:PA14_27180 putative ErfK/YbiS/YcfS/YnhG family protein	LysM domain protein identified by match to protein family HMM PF01476; match to protein family HMM PF03734	conserved hypothetical protein Code: S; COG: COG1376	conserved hypothetical protein	ErfK/YbiS/YcfS/YnhG family protein precursor	Putative ATP synthase subunit	Putative uncharacterized protein	LysM domain/ErfK/YbiS/YcfS/YnhG family protein	Conserved protein	LysM domain/ErfK/YbiS/YcfS/YnhG family protein	ErfK/YbiS/YcfS/YnhG family protein precursor	LysM domain/ErfK/YbiS/YcfS/YnhG family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative LysM domain	
ECOLI01635	Cysteine desulfuration protein sufE	Putative uncharacterized protein	Uncharacterized sufE-like protein slr1419	Putative uncharacterized protein	Possible sufE protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Cysteine desulfuration protein sufE	Cysteine desulfuration protein sufE	identified by match to PFAM protein family HMM PF02657 conserved hypothetical protein	Cysteine desulfuration protein sufE	Putative uncharacterized protein	SufE protein probably involved in Fe-S center assembly	Cysteine desulfuration protein sufE	Putative uncharacterized protein	hypothetical protein	hypothetical protein	Putative uncharacterized protein	Residues 1 to 138 of 138 are 98 pct identical to residues 1 to 138 of a 138 aa protein from Escherichia coli K12 ref: NP_416194.1 orf, conserved hypothetical protein	Cysteine desulfuration protein sufE	Cysteine desulfuration protein sufE	Cysteine desulfuration protein sufE	identified by match to protein family HMM PF02657 Fe-S metabolism associated family protein	Putative uncharacterized protein	Putative uncharacterized protein	SufE protein probably involved in Fe-S center assembly	putative SufE protein probably involved in Fe-S center assembly	
ECOLI01636	Cysteine desulfurase	cysteine desulfurase, putative	Probable cysteine desulfurase	Probable cysteine desulfurase	Probable cysteine desulfurase	Aminotransferase, putative cysteine desulfurase	Putative aminotransferase	Cysteine desulfurase	Cysteine desulfurase	Probable cysteine desulfurase	NifS protein	Cysteine desulfurase	Aminotransferase, class V	Cysteine desulfurase	Probable cysteine desulfurase	Cysteine desulfurase	Cysteine desulfurase	Cysteine desulfurase	Alr2495 protein	Cysteine desulfurase	Lmo2413 protein	Selenocysteine lyase	Probable cysteine desulfurase 2	Aminotransferase	Cysteine desulfurase	Cysteine desulfurase	Putative selenocysteine lyase	Probable cysteine desulfurase	Probable cysteine desulfurase	
ECOLI01637	Protein sufD	ABC transporter membrane protein	ABC transporter permease	Putative uncharacterized protein	ABC transporter ATP-binding protein	Transport system	Putative uncharacterized protein	Alr2494 protein	Transport protein involved in the [Fe-S] cluster assembly	SufD protein	Putative uncharacterized protein sufD	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Conserved protein, UPF0051	Putative uncharacterized protein ynhC	hypothetical protein	SufD	SufD, needed for fhuF Fe-S center production/stability	ABC transporter, membrane component	hypothetical protein	Residues 1 to 423 of 423 are 98 pct identical to residues 1 to 423 of a 423 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288115.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Uncharacterized protein family UPF0051	YnhC protein	SufD protein	Similar ABC transporter, permease component hypothetical protein	conserved gene ABC transporter, permease component	Similar ABC transporter, permease component hypothetical protein	hypothetical protein	identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981 FeS assembly protein SufD	
ECOLI01638	Probable ATP-dependent transporter sufC	ABC transporter, ATP-binding protein	ABC transporter, putative	ABC transporter ATP-binding protein	ATP-dependent transporter, putative	ABC transporter, ATP-binding protein	Probable ATP-dependent transporter slr0075	ABC transporter ATP-binding protein	ATPase involved in Fe-S cluster formation SufC	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter subunit Ycf16	247aa long hypothetical ATP-dependent transporter YCF16	ABC transport system ATP-binding protein	identified by match to PFAM protein family HMM PF03193 ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	Putative iron-regulated ABC transporter ATP- binding protein	Probable ATP binding protein of ABC transporter	ABC transporter, ATP-binding component	FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC related protein	ABC transporter ATP-binding protein	ABC transporter, ATPase subunit	Putative ABC transporter	hypothetical ABC transporter ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter, ATP binding component	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	
ECOLI01639	Protein sufB	ABC transporter subunit, putative	Putative uncharacterized protein	ABC transporter membrane protein	UPF0051 protein slr0074	ABC transporter permease	FeS assembly protein SufB	Vng0525c	UPF0051 protein PH1385	Putative uncharacterized protein TVG1463374	identified by match to PFAM protein family HMM PF03197 hypothetical protein	ABC transporter permease	Putative FeS assembly protein SufB	Possible ABC transporter component	ABC transporter, membrane component	Putative uncharacterized protein Ta0203	Hypothetical protein	ORF4	hypothetical protein	ABC transporter ATP-binding protein	ABC transporter, membrane component	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	ABC transporter ATP-binding protein	ABC transporter subunit	Putative uncharacterized protein STY1753	
ECOLI01640	Protein sufA	Putative uncharacterized protein	SufA protein	Putative uncharacterized protein sufA	Uncharacterized protein BUsg_114	Putative uncharacterized protein ydiC	Residues 1 to 122 of 122 are 98 pct identical to residues 1 to 122 of a 122 aa protein from Escherichia coli K12 ref: NP_416199.1 orf, conserved hypothetical protein	Putative uncharacterized protein	YdiC protein	SufA protein	HesB-like domain	IPR000361: Protein of unknown function, HesB/YadR/YfhF putative HesB-like domain	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	HesB/YadR/YfhF family protein	Putative HesB-like domain protein	ortholog to Escherichia coli bnum: b1684; MultiFun: Metabolism 1.7.19 Fe-S cluster assembly protein	Code: S; COG: COG0316 conserved hypothetical protein	HesB/YadR/YfhF	Code: S; COG: COG0316 conserved hypothetical protein	iron-sulfur cluster assembly accessory protein identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049	iron-sulfur cluster assembly accessory protein identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049	conserved hypothetical protein	uncharacterized conserved protein COG0316	SufA protein	Hypothetical protein	iron-sulfur cluster assembly accessory protein identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049	SufA scaffold protein for iron-sulfur cluster assembly	HesB/YadR/YfhF	
ECOLI01641	Uncharacterized protein ydiH	Hypothetical protein ydiH	Uncharacterized protein ydiH	Residues 1 to 89 of 89 are 98 pct identical to residues 1 to 89 of a 89 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288119.1 orf, conserved hypothetical protein	Similarities with unknown protein YdiH of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydiH	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydiH	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydiH	Putative uncharacterized protein	
ECOLI01642	Esterase ydiI	Putative esterase PA1618	Putative uncharacterized protein	Putative comA operon protein	Lmo2385 protein	ComA operon protein 2	ComA operon protein	Hypothetical protein ydiI	identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369 comA operon protein, putative	Putative uncharacterized protein	4-hydroxybenzoyl-CoA thioesterase domain protein	Putative thioesterase	Putative uncharacterized protein	Thioesterase	Lin2484 protein	Residues 1 to 136 of 136 are 99 pct identical to residues 1 to 136 of a 136 aa protein from Escherichia coli K12 ref: NP_416201.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YdiI of Escherichia coli	identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369 ComA2 family protein	Hypothetical protein SE0638	Putative uncharacterized protein	conserved protein; Molecular Function: catalytic activity (GO:0003824) conserved protein YuxO	IPR003736: Phenylacetic acid degradation-related protein; IPR006683: Thioesterase superfamily putative protein PaaI, possibly involved in aromatic compounds catabolism	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	identified by similarity to GP:18266385; match to protein family HMM PF03061; match to protein family HMM TIGR00369 thioesterase family protein	Uncharacterized protein, possibly involved in aromatic compounds catabolism PaaI protein	Putative uncharacterized protein	comA operon protein (competence protein)	
ECOLI01643	Uncharacterized protein ydiJ	Putative uncharacterized protein	Fe-S oxidoreductase	Conserved hypothetical FAD-binding protein	hypothetical Fe-S oxidoreductase	Hypothetical protein ydiJ	Putative uncharacterized protein	Oxidoreductase, FAD-binding, putative	Putative FAD-binding oxidase	PMID: 3286606 best DB hits: BLAST: gb:AAG20509.1; (AE005123) glycolate oxidase subunit; GlcD; E=2e-48 gb:AAG20148.1; (AE005092) glycerol-3-phosphate dehydrogenase chain; E=5e-40 gb:AAG56674.1; AE005391_11 (AE005391) putative oxidase; E=2e-38 COG: VNG2422G_1; COG0277 FAD/FMN-containing dehydrogenases; E=2e-49 VNG2422G_2; COG0247 Fe-S oxidoreductases; E=7e-42 ydiJ_1; COG0277 FAD/FMN-containing dehydrogenases; E=5e-39 PFAM: PF01565; FAD binding domain; E=6.7e-40 PF02913; FAD linked oxidases, C-terminal; E=2.6e-14 putative oxidase	Putative uncharacterized protein VP1270	Putative oxidase	Fe-S oxidoreductase	Residues 1 to 1018 of 1018 are 99 pct identical to residues 1 to 1018 of a 1018 aa protein from Escherichia coli K12 ref: NP_416202.1 putative oxidase	Putative uncharacterized protein	Similar to putative oxidase YdiJ of Escherichia coli	Similar to oxidoreductase proteins hypothetical protein	conserved gene oxidase	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain paral putative oxidase	similar to Salmonella typhi CT18 conserved hypothetical FAD-binding protein conserved hypothetical FAD-binding protein	Putative uncharacterized protein	anaerobic glycerol-3-phosphate dehydrogenase subunit C	Similar to: HI1163, YDIJ_HAEIN conserved FAD/FMN-containing dehydrogenase	FAD/FMN-containing dehydrogenases GlcD protein	Oxidoreductase, putative	Similar to Q8EDV0 Oxidoreductase,FAD-binding, putative from Shewanella oneidensis (1013 aa). FASTA: opt: 1758 Z-score: 1886.5 E(): 3.1e-97 Smith-Waterman score: 2679; 40.573 identity in 1013 aa overlap. Contains a frameshift after aa 89. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt1328c pseudo FAD-binding family protein, pseudogene	Two domain protein containing GlcD-like FAD/FMN dehydrogenase and GlpC-like Fe-S oxidoreductase	Putative oxidase	Putative oxidoreductase	
ECOLI01644	UPF0118 inner membrane protein ydiK	Putative membrane protein	Hypothetical protein ydiK	Putative membrane protein	UPF0118 membrane protein BUsg_115	Putative uncharacterized protein	UPF0118 membrane protein BU123	Residues 1 to 370 of 370 are 100 pct identical to residues 1 to 370 of a 370 aa protein from Escherichia coli K12 ref: NP_416203.1 orf, conserved hypothetical protein	Putative membrane protein	Yb1688 protein	Similar to probable membrane protein YdiK of Escherichia coli	Putative uncharacterized protein	putative permease	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	UPF0118 membrane protein bbp_117	Putative permease	Putative permease	Protein of unknown function UPF0118	Code: R; COG: COG0628 conserved hypothetical protein	Code: R; COG: COG0628 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG0628; orf conserved hypothetical protein	protein of unknown function UPF0118	Putative uncharacterized protein	Putative membrane protein	Putative purine regulated protein YdiK	hypothetical membrane protein	Membrane protein	
ECOLI01645	Uncharacterized protein ydiL	Hypothetical protein ydiL	Putative uncharacterized protein	Residues 1 to 127 of 127 are 98 pct identical to residues 1 to 127 of a 127 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288123.1 orf, conserved hypothetical protein	putative cytoplasmic protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydiL	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative uncharacterized protein ydiL	Putative cytoplasmic protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein ydiL	Putative uncharacterized protein	Putative uncharacterized protein ydiL	Putative uncharacterized protein ydiL	
ECOLI01646	Inner membrane transport protein ydiM	Hypothetical transport protein ydiM	Putative transport system permease protein	Lin2340 protein	Residues 1 to 401 of 401 are 98 pct identical to residues 1 to 404 of a 404 aa protein from Escherichia coli K12 ref: NP_416205.1 putative transport system permease protein	Transport protein	IPR000524: Bacterial regulatory protein, GntR family; IPR005828: General substrate transporter; IPR005829: Sugar transporter superfamily;IPR007114: Major facilitator superfamily putative MFS family transport protein	identified by match to protein family HMM PF00083 major facilitator family transporter	Putative MFS family transport protein	Code: GEPR; COG: COG0477 putative transport system permease protein	Hypothetical transport protein YdiM	Hypothetical transport protein YdiM	permease of the major facilitator superfamily	Complete genome	predicted transporter	Putative transport protein	Major facilitator family transporter	Permease	Predicted transporter	Major facilitator family transporter	Major facilitator superfamily MFS_1	Major facilitator family transporter	Putative uncharacterized protein	Transport protein	Inner membrane transport protein YdiM	Inner membrane transport protein YdiM	Inner membrane transport protein YdiM	Putative MFS-family transport protein	Transporter, major facilitator family	
ECOLI01647	Inner membrane transport protein ydiN	Lmo2237 protein	Hypothetical transport protein ydiN	Putative amino acid/amine transport protein	Lin2339 protein	Residues 1 to 386 of 386 are 99 pct identical to residues 38 to 423 of a 423 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288125.1 putative amino acid-amine transport protein	IPR007114: Major facilitator superfamily putative MFS family transport protein	transporter, putative	Putative MFS family transport protein	Code: GEPR; COG: COG0477 putative amino acid/amine transport protein	Hypothetical transport protein YdiN	Hypothetical transport protein YdiN	putative transport protein	Complete genome	putative amino acid/amine transport protein Code: GEPR; COG: COG0477	permease of the major facilitator superfamily	predicted transporter	Transporter, major facilitator family	Predicted transporter protein	Predicted transporter	Transporter, major facilitator family	Major facilitator superfamily MFS_1 precursor	Transporter, major facilitator family	Putative uncharacterized protein	Inner membrane transport protein YdiN	Putative MFS family transport protein	Transporter, major facilitator family	Transporter, major facilitator family	Transporter, major facilitator family	
ECOLI01648	Quinate/shikimate dehydrogenase	DEHA2C03674p;similar to uniprot|P11635 Neurospora crassa Quinate 5- dehydrogenase;	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate 5-dehydrogenase	Shikimate 5-dehydrogenase	Shikimate dehydrogenase	Quinate/shikimate dehydrogenase	shikimate 5-dehydrogenase	Shikimate dehydrogenase	Quinate/shikimate dehydrogenase	Residues 1 to 288 of 288 are 99 pct identical to residues 1 to 288 of a 288 aa protein from Escherichia coli K12 ref: NP_416207.1 putative oxidoreductase	Shikimate 5-dehydrogenase	Shikimate dehydrogenase	putative shikimate 5-dehydrogenase	Putative uncharacterized protein gbs1724	identified by match to PFAM protein family HMM PF01488 shikimate 5-dehydrogenase	Shikimate dehydrogenase	best blastp match gb|AAK34367.1| (AE006590) putative shikimate 5-dehydrogenase [Streptococcus pyogenes M1 GAS] putative shikimate 5-dehydrogenase	Quinate/shikimate dehydrogenase	go_component: cytoplasm [goid 0005737]; go_function: 3-dehydroquinate dehydratase activity [goid 0003855]; go_function: 3-dehydroquinate synthase activity [goid 0003856]; go_function: 3-phosphoshikimate 1-carboxyvinyltransferase activity [goid 0003866]; go_function: shikimate 5-dehydrogenase activity [goid 0004764]; go_function: shikimate kinase activity [goid 0004765]; go_process: aromatic amino acid family biosynthesis [goid 0009073] shikimate 5-dehydrogenase, putative	AroE shikimate 5-dehydrogenase	identified by similarity to SP:Q58484; match to protein family HMM TIGR00507 shikimate 5-dehydrogenase	identified by similarity to SP:P28244; match to protein family HMM PF01488; match to protein family HMM TIGR00507 shikimate 5-dehydrogenase	shikimate 5-dehydrogenase	Code: E; COG: COG0169 putative oxidoreductase	shikimate 5-dehydrogenase	identified by match to protein family HMM PF01488; match to protein family HMM TIGR00507 shikimate 5-dehydrogenase	
ECOLI01649	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	CDS_ID OB0430 3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	Residues 1 to 252 of 252 are 98 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288127.1 3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase	identified by match to protein family HMM PF01487; match to protein family HMM TIGR01093 3-dehydroquinate dehydratase, type I	3-dehydroquinate dehydratase	InterProMatches:IPR001381; Molecular Function: 3-dehydroquinate dehydratase activity (GO:0003855), Biological Process: aromatic amino acid family biosynthesis (GO:0009073) 3-dehydroquinate dehydratase	IPR001381: Dehydroquinase class I 3-dehydroquinate dehydratase	similar to Salmonella typhi Ty2 3-dehydroquinate dehydratase 3-dehydroquinate dehydratase	hypothetical protein, similar to 3-dehydroquinate dehydratase	
ECOLI01650	Uncharacterized protein ydiF	Propionate CoA-transferase	CoA transferase, putative	Putative propionate CoA-transferase	Vng6298c	Propionate CoA-transferase	Lmo2172 protein	Hypothetical protein ydiF	Putative enzyme	Acetyl-CoA:acetoacetyl-CoA transferase	Lin2275 protein	putative acetyl-CoA:acetoacetyl-CoA transferase beta subunit	identified by similarity to GP:7242549; match to protein family HMM PF01144 propionate CoA-transferase	Putative acetyl-CoA:acetoacetyl-CoA transferase beta subunit	coenzyme A transferase, putative	Coenzyme A transferase	Coenzyme A transferase	Weakly similar to Homo sapiens mitochondrial succinyl-CoA:3-ketoacid-coenzyme A transferase SCOT SW:SCOT_HUMAN (P55809) (520 aa) fasta scores: E(): 2e-05, 21.681% id in 452 aa. Previously sequenced as Staphylococcus aureus putative acetyl-CoA/acetoacetyl-CoA transferase FadX TR:AAK51154 (EMBL:AY033081) (525 aa) fasta scores: E(): 2.2e-208, 98.654% id in 520 aa putative acetyl-CoA transferase	similar to gi|49485112|ref|YP_042333.1| [Staphylococcus aureus subsp. aureus MSSA476], percent identity 60 in 518 aa, BLASTP E(): e-174 putative acetyl-CoA transferase	transcript_id=ENSOCUT00000007677	acyl CoA:acetate/3-ketoacid CoA transferase COG4670	3-oxoacid CoA-transferase, subunit B KEGG: dra:DRA0054 3-oxoacid CoA-transferase, ev=0.0, 82% identity TIGRFAM: 3-oxoacid CoA-transferase, subunit B: (6.2e-137) 3-oxoacid CoA-transferase, subunit A: (4.9e-69) PFAM: coenzyme A transferase: (7.4e-43)	transcript_id=ENSETET00000015796	Putative uncharacterized protein	propionate CoA-transferase identified by similarity to GB:CAB77207.1; match to protein family HMM PF01144	Putative uncharacterized protein ydiF	propionate CoA-transferase	acetyl-CoA-transferase subunit, putative identified by match to protein family HMM PF01144	coenzyme A transferase	
ECOLI01651	Uncharacterized protein ydiO	Uncharacterized protein ydiO	IPR006089: Acyl-CoA dehydrogenase putative acyl-CoA dehydrogenase	Putative acyl-CoA dehydrogenase	Code: I; COG: COG1960 putative oxidoreductase	Code: I; COG: COG1960 putative oxidoreductase	Putative uncharacterized protein	Putative uncharacterized protein ydiO	Isovaleryl-CoA dehydrogenase PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain KEGG: fra:Francci3_2430 acyl-CoA dehydrogenase-like	Isovaleryl-CoA dehydrogenase	acyl-coA dehydrogenase	Acyl-CoA dehydrogenase	Predicted acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase domain protein	Acyl-CoA dehydrogenase	Putative uncharacterized protein	Acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Putative acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Putative acyl-CoA dehydrogenase	Putative acyl-CoA dehydrogenase	Putative acyl-CoA dehydrogenase	Putative acyl-CoA dehydrogenase	
ECOLI01652	Uncharacterized HTH-type transcriptional regulator ydiP	Putative ARAC-type regulatory protein	IPR000005: Helix-turn-helix, AraC type; IPR007113: Cupin domain putative transcription regulator, AraC family	Putative transcription regulator, AraC family	identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM TIGR01563 substrate-binding transcriptional regulator, araC family	identified by similarity to GB:CAB64665.1; match to protein family HMM PF00165 transcriptional regulator, AraC family	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Transcriptional regulator, AraC family COG2207 [K] AraC-type DNA-binding domain-containing proteins	Hypothetical transcriptional regulator YdiP	Hypothetical transcriptional regulator YdiP	Transcriptional regulator, AraC family	putative DNA-binding transcriptional regulator	AraC-like transcriptional regulator (HTH and ligand binding domain)	Transcriptional regulator, AraC family	YisR	Predicted DNA-binding transcriptional regulator	Helix-turn-helix-domain containing protein, AraC type	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Hypothetical transcriptional regulator	Transcriptional regulator, AraC family	Putative uncharacterized protein	Putative transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family protein	Transcriptional regulator, AraC family protein	Transcriptional regulator, AraC family protein	Putative HTH-type transcriptional regulator	

ECOLI01653	Putative electron transfer flavoprotein subunit ydiQ	Putative electron transfer flavoprotein subunit ydiQ	Putative transport protein	Residues 1 to 289 of 289 are 97 pct identical to residues 1 to 287 of a 287 aa protein from Escherichia coli dbj: BAA15466.1 FixA protein	IPR000049: Electron transfer flavoprotein beta-subunit putative electron transfer flavoprotein	could be both subunits electron transfer flavoprotein	Putative electron transfer flavoprotein	Putative electron transfer flavoprotein subunit YdiQ	Putative electron transfer flavoprotein subunit ydiQ	Electron transfer flavoprotein beta-subunit	putative transport protein Code: C; COG: COG2086	electron transfer flavoprotein beta-subunit PFAM: electron transfer flavoprotein beta-subunit KEGG: stm:STM0075 putative flavoprotein reductase, carnitine metabolism	putative electron transfer flavoprotein subunit YdiQ	Protein fixA	Electron transfer flavoprotein alpha/beta-subunit	Electron transfer flavoprotein alpha/beta-subunit	Conserved protein	Electron transfer flavoprotein alpha/beta-subunit	Protein FixA homolog	Putative uncharacterized protein	Protein FixA homolog	FixA protein	FixA protein	FixA protein	Putative electron transfer flavoprotein subunit	FixA protein	Protein FixA homolog	FixA protein	pseudo	
ECOLI01654	Putative electron transfer flavoprotein subunit ydiR	Electron transfer flavoprotein, subunit alpha	Putative electron transfer flavoprotein subunit ydiR	Electron transfer flavoprotein alpha-subunit	Putative flavoprotein	nitrogen fixation protein,fixB	Residues 1 to 312 of 312 are 99 pct identical to residues 1 to 312 of a 312 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288132.1 putative flavoprotein	IPR001308: Electron transfer flavoprotein, alpha subunit putative electron transfer flavoprotein	electron transfer flavoprotein	Putative electron transfer flavoprotein	identified by similarity to SP:P53578; match to protein family HMM PF00766; match to protein family HMM PF01012 electron transfer flavoprotein, alpha subunit	Code: C; COG: COG2025 putative flavoprotein	FixB electron transfer protein similarity:fasta; SWALL:FIXB_RHIME (SWALL:P09819); Rhizobium meliloti; FixB protein; fixB; length 353 aa; 345 aa overlap; query 20-364 aa; subject 3-347 aa similarity:fasta; SWALL:Q8RSP6 (EMBL:AJ431175); Rhizobium leguminosarum; FixB protein; fixB; length 343 aa; 342 aa overlap; query 36-377 aa; subject 1-342 aa possible alternative start site at codon 36	electron transfer flavoprotein, alpha subunit	Putative electron transfer flavoprotein subunit YdiR	Electron transfer flavoprotein alpha chain, FixB	Putative electron transfer flavoprotein subunit ydiR	electron transfer flavoprotein alpha-subunit identified by match to protein family HMM PF00766	Electron transfer flavoprotein, alpha subunit	electron transfer flavoprotein alpha-subunit	putative flavoprotein Code: C; COG: COG2025	Protein FixB	FixB protein	predicted electron transfer flavoprotein, FAD-binding	FixB protein	Electron transfer flavoprotein, alpha subunit- like protein	Protein fixB	Predicted electron transfer flavoprotein, FAD- binding	Electron transfer flavoprotein, alpha subunit/FixB family protein	
ECOLI01655	Probable electron transfer flavoprotein-quinone oxidoreductase ydiS	Bacteriochlorophyll synthase, 43 kDa subunit homolog	Probable electron transfer flavoprotein-quinone oxidoreductase ydiS	geranylgeranyl hydrogenase	Flavoprotein; probably electron transport	Residues 1 to 429 of 429 are 99 pct identical to residues 1 to 429 of a 429 aa protein from Escherichia coli K12 ref: NP_416214.1 flavoprotein; probably electron transport	IPR000205: NAD-binding site; IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I; IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase;IPR003042: Aromatic-ring hydroxylase flavoprotein	Flavoprotein	flavoprotein; probably electron transport; Code: C; COG: COG0644 YdiS	flavoprotein; probably electron transport; Code: C; COG: COG0644 YdiS	Probable electron transfer flavoprotein-quinone oxidoreductase YdiS	Probable electron transfer flavoprotein-quinone oxidoreductase ydiS	probable electron transfer flavoprotein	geranylgeranyl reductase TIGRFAM: geranylgeranyl reductase PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase KEGG: mbu:Mbur_0303 geranylgeranyl reductase	FAD dependent oxidoreductase	Probable electron transfer flavoprotein-quinone oxidoreductase YdiS Code: C; COG: COG0644	predicted oxidoreductase with FAD/NAD(P)-binding domain	Protein fixC homolog	Geranylgeranyl reductase precursor	Predicted oxidoreductase with FAD/NAD(P)-binding domain	Electron-transferring-flavoprotein dehydrogenase	Protein FixC homolog	Geranylgeranyl reductase	Putative uncharacterized protein	Protein FixC homolog	Probable electron transfer flavoprotein-quinone oxidoreductase YgcN	Probable electron transfer flavoprotein-quinone oxidoreductase YgcN	Probable electron transfer flavoprotein-quinone oxidoreductase YgcN	Putative electron transfer flavoprotein-quinone oxidoreductase	
ECOLI01656	Ferredoxin-like protein ydiT	Ferredoxin-like protein ydiT	Putative uncharacterized protein ydiT	Residues 1 to 97 of 97 are 95 pct identical to residues 1 to 97 of a 97 aa protein from Escherichia coli K12 ref: NP_416215.1 orf, conserved hypothetical protein	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain putative ferredoxin	Putative ferredoxin	Code: C; COG: COG2440 conserved hypothetical protein	Code: C; COG: COG2440; orf conserved hypothetical protein	Ferredoxin-like protein YdiT	Ferredoxin-like protein YdiT	putative ferredoxin KEGG: stm:STM1351 putative ferredoxin	conserved hypothetical protein Code: C; COG: COG2440	predicted 4Fe-4S ferredoxin-type protein	KEGG: slo:Shew_2680 putative ferredoxin putative ferredoxin	KEGG: slo:Shew_2680 putative ferredoxin putative ferredoxin	Iron-sulfur cluster-binding protein	Putative ferredoxin	Predicted 4Fe-4S ferredoxin-type protein	Putative uncharacterized protein	Iron-sulfur cluster-binding protein	Ferredoxin-like protein	Putative uncharacterized protein	Iron-sulfur cluster-binding protein	Ferredoxin like protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein	Ferredoxin-like protein	Ferredoxin like protein	Iron-sulfur cluster-binding protein	
ECOLI01657	Short-chain-fatty-acid--CoA ligase	Putative ligase/synthetase	Residues 1 to 566 of 566 are 97 pct identical to residues 1 to 566 of a 566 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288135.1 putative ligase-synthetase	IPR000873: AMP-dependent synthetase and ligase Homolog of a plant pathogenicity factor	Plant pathogenicity factor-like protein	Putative uncharacterized protein	Putative uncharacterized protein ydiD	putative ligase/synthetase Code: IQ; COG: COG0318	short chain acyl-CoA synthetase, anaerobic	Probable synthetase/ligase	Short-chain-fatty-acid--CoA ligase	Short chain acyl-CoA synthetase, anaerobic	AMP-dependent synthetase and ligase	Short-chain-fatty-acid--CoA ligase	Putative uncharacterized protein	Short-chain-fatty-acid--CoA ligase	Short-chain-fatty-acid--CoA ligase	Short-chain-fatty-acid--CoA ligase	Short-chain-fatty-acid--CoA ligase	Putative ligase/synthetase	Short-chain-fatty-acid--CoA ligase	Short-chain-fatty-acid--CoA ligase	Putative ligase/synthetase	Putative ligase	Short chain acyl-CoA synthetase, anaerobic	Short chain acyl-CoA synthetase, anaerobic	Short chain acyl-CoA synthetase, anaerobic	Short chain acyl-CoA synthetase, anaerobic	Short chain acyl-CoA synthetase, anaerobic	
ECOLI01658	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	hypothetical phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	putative phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	PHOSPHOENOLPYRUVATE SYNTHASE	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase	
ECOLI01659	Putative phosphotransferase ydiA	Putative phosphotransferase GSU0450	Putative phosphotransferase PD_0525	Putative phosphotransferase XCC2165	Putative phosphotransferase CPE2242	Putative phosphotransferase CC_0001	Putative phosphotransferase NMB0619	Putative phosphotransferase PA1769	UPF0085 protein VVA0515	Putative phosphotransferase DR_1728	Putative phosphotransferase Atu0001	Putative phosphotransferase ydiA	Putative phosphotransferase BA_4520/GBAA_4520/BAS4196	Putative phosphotransferase DP2529	Putative phosphotransferase BC_4293	Putative phosphotransferase BT9727_4034	Putative phosphotransferase BPSL2143	conserved hypothetical protein	UPF0085 protein ydiA	identified by match to protein family HMM PF03618 conserved hypothetical protein	similar to GP:14024532; identified by sequence similarity; putative conserved hypothetical protein	Putative phosphotransferase VC_A0986	Putative phosphotransferase BP1435	Putative phosphotransferase BB2621	UPF0085 protein SO_2645	Putative phosphotransferase ECA1852	Putative phosphotransferase STH585	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative phosphotransferase PSPTO_2291	
ECOLI01660	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, trp- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, trp- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	3-deoxy-D-arabinoheptulosonate-7-phosphate (DAHP) synthetase	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	Residues 1 to 348 of 348 are 99 pct identical to residues 1 to 348 of a 348 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288138.1 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible)	Phospho-2-dehydro-3-deoxyheptonate aldolase	Phospho2-dehydro-3-deoxyheptonate aldolase, trp- sensitive	IPR006219: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 1 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase), tryptophan repressible	similar to Salmonella typhi CT18 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase	Phospho-2-dehydro-3-deoxyheptonate aldolase	phospho-2-dehydro-3-deoxyheptonate aldolase	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	identified by similarity to SP:P46245; match to protein family HMM PF00793; match to protein family HMM TIGR00034 phospho-2-dehydro-3-deoxyheptonate aldolase, trp-sensitive	DAHP synthetase; tryptophan repressible; Code: E; COG: COG0722 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	DAHP synthetase, tryptophan repressible; Code: E; COG: COG0722 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	phospho-2-dehydro-3-deoxyheptonate aldolase	DAHP synthetase, tryptophan repressible; Code: E; COG: COG0722 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase	Phospho-2-dehydro-3-deoxyheptonate aldolase	
ECOLI01661	Uncharacterized protein ydiE	Uncharacterized protein ydiE	Code: P; COG: COG4256 conserved hypothetical protein	Code: P; COG: COG4256 conserved hypothetical protein	Code: P; COG: COG4256; orf conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein ydiE	conserved hypothetical protein Code: P; COG: COG4256	Putative cytoplasmic protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydiE	Putative uncharacterized protein ydiE	Putative uncharacterized protein ydiE	Putative uncharacterized protein ydiE	Putative uncharacterized protein ydiE	Predicted protein	Putative uncharacterized protein ydiE	YdiE protein	Conserved protein	Conserved protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI01662	UPF0061 protein ydiU	UPF0061 protein C20G4.05c [Source:GeneDB_Spombe;Acc:SPAC20G4.05c]	UPF0061 protein PD_1992	UPF0061 protein XCC2284	DEHA2C03652p;similar to CA2341|IPF13838 Candida albicans IPF13838;	UPF0061 protein PA5023	UPF0061 protein VV1089	UPF0061 protein ydiU	UPF0061 protein BPSL1422	hypothetical protein	Putative uncharacterized protein	UPF0061 protein ydiU	UPF0061 protein VC_1931	UPF0061 protein BP1090	UPF0061 protein BB2107	UPF0061 protein SO_0330	UPF0061 protein ECA1842	best DB hits: BLAST: pir:D82536; conserved hypothetical protein XF2619 [imported] -; E=1e-140 pir:T49917; hypothetical protein T24H18.200 - Arabidopsis thaliana; E=1e-100 swissprot:P77649; YDIU_ECOLI HYPOTHETICAL 54.4 KD PROTEIN IN; E=2e-82 COG: XF2619; COG0397 Uncharacterized ACR; E=1e-141 PFAM: PF02696; Uncharacterized ACR, YdiU/UPF0061; E=5e-63 conserved hypothetical protein	UPF0061 protein PSPTO_5028	UPF0061 protein BPP1919	UPF0061 protein BMA1440	UPF0061 protein VP0909	Putative uncharacterized protein	UPF0061 protein ydiU	UPF0061 protein VV1_0039	Residues 1 to 478 of 478 are 98 pct identical to residues 1 to 478 of a 478 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288140.1 orf, conserved hypothetical protein	pseudo	UPF0061 protein RSc1748	UPF0061 protein CV_1733	
ECOLI01663	Uncharacterized protein ydiV	Hypothetical protein ydiV	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 237 of 237 are 97 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli O157:H7 ref: NP_310441.1 orf, conserved hypothetical protein	putative Diguanylate cyclase/phosphodiesterase domain 1	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Cyclic di-GMP regulator cdgR	Code: T; COG: COG2200 conserved hypothetical protein	Code: T; COG: COG2200 conserved hypothetical protein	Code: T; COG: COG2200; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydiV	conserved hypothetical protein Code: T; COG: COG2200	conserved hypothetical protein	Putative diguanylate phosphodiesterase	Putative uncharacterized protein	Putative uncharacterized protein	Diguanylate phosphodiesterase	Conserved protein	Putative uncharacterized protein	Putative diguanylate phosphodiesterase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydiV	Putative uncharacterized protein	
ECOLI01664	Probable lipoprotein nlpC	Putative lipoprotein protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Cell wall-associated hydrolase	Putative lipoprotein	Putative lipoprotein	putative lipoprotein NlpC	Probable lipoprotein nlpC	NLP/P60 family protein	Lipoprotein NlpC	Probable lipoprotein	NLP/P60 family protein	hypothetical conserved protein	Lipoprotein NlpC	Lipoprotein	NLP/P60 family protein	2SCG1.15, possible NLP/P60 family protein (putative secreted protein), len: 157 aa; similar to C-terminal region of TR:CAB92659 (EMBL:AL356832) Streptomyces coelicolor putative NLP/P60 family secreted protein SCD63A.07c, 398 aa; fasta scores: opt: 351 z-score: 415.4 E(): 1.1e-15; 42.5% identity in 134 aa overlap. Contains Pfam match to entry PF00877 NLPC_P60, NLP/P60 family.  Contains possible N-terminal region signal peptide sequence putative NLP/P60 family protein (putative secreted protein)	Cell wall-associated hydrolase	Residues 1 to 154 of 154 are 98 pct identical to residues 1 to 154 of a 154 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288142.1 lipoprotein	Putative lipoprotein	Probable lipoprotein NlpC	identified by similarity to SP:P23898; match to protein family HMM PF00877 lipoprotein NlpC	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark lipoprotein	lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Lipoprotein	Putative lipoprotein	
ECOLI01665	Vitamin B12 import ATP-binding protein btuD	Putative ATP-binding ABC transporter protein	Hypothetical vitamin B12 ABC transporter, ATP-binding protein BtuD	Vitamin B12 import ATP-binding protein btuD	Vitamin B12 import ATP-binding protein btuD	Iron compound ABC transporter, ATP-binding protein	Vitamin B12 import ATP-binding protein btuD	Vitamin B12 import ATP-binding protein btuD	Residues 1 to 249 of 249 are 99 pct identical to residues 1 to 249 of a 249 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288143.1 ATP-binding component of vitamin B12 transport system	Vitamin B12 import ATP-binding protein btuD	Vitamin B12 import ATP-binding protein btuD	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (binding protein), vitamin B12 transport protein	similar to Salmonella typhi CT18 vitamin B12 ABC transport ATP-binding protein vitamin B12 ABC transport ATP-binding protein	Vitamin B12 import ATP-binding protein btuD	Vitamin B12 import ATP-binding protein btuD	Code: H; COG: COG4138 ATP-binding component of vitamin B12 transport system	Code: H; COG: COG4138 ATP-binding component of vitamin B12 transport system	Code: H; COG: COG4138 ATP-binding component of vitamin B12 transport system	Vitamin B12 import ATP-binding protein btuD	Putative vitamin B12 transport ATP-binding protein	Vitamin B12 import ATP-binding protein btuD	ABC transporter related PFAM: ABC transporter related SMART: AAA ATPase KEGG: sec:SC3017 putative ABC-type cobalt transport system, ATPase component	Vitamin B12 transport ATP-binding protein	ABC transporter related precursor	Putative vitamin B12 transport ATP-binding protein	ATP-binding component of vitamin B12 transport system Code: H; COG: COG4138	Vitamin B12 transport ATP-binding protein	ABC transporter related	vitamin B12-transporter ATPase	
ECOLI01666	Vitamin B12 transport periplasmic protein btuE	similar to sp|P38143 Saccharomyces cerevisiae YBR244w GPX2 glutathione peroxidases, start by similarity	Glutathione peroxidase	Glutathione peroxidase	similar to uniprot|P40581 Saccharomyces cerevisiae YIR037w HYR1 glutathione peroxidase;	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	go_component: intracellular [goid 0005622]; go_function: glutathione peroxidase activity [goid 0004602]; go_function: thiol peroxidase activity [goid 0009031]; go_process: response to oxidative stress [goid 0006979] glutathione peroxidase, putative	Glutathione peroxidase	PMID: 11859360 best DB hits: BLAST: pir:T44271; glutathione peroxidase homolog [imported] -; E=4e-40 embl:CAB88451.1; (AL353815) putative glutathione peroxidase; E=4e-38 pir:F83541; probable glutathione peroxidase PA0838 [imported] -; E=5e-38 COG: PA0838; COG0386 Glutathione peroxidase; E=5e-39 PFAM: PF00255; Glutathione peroxidase; E=7e-54 glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	Glutathione peroxidase	
ECOLI01667	Vitamin B12 import system permease protein btuC	putative vitamin B12 ABC transporter, permease protein BtuC	Vitamin B12 import system permease protein btuC	Vitamin B12 import system permease protein btuC	Vitamin B12 import system permease protein btuC	Vitamin B12 import system permease protein btuC	Vitamin B12 import system permease protein btuC	Residues 1 to 326 of 326 are 99 pct identical to residues 1 to 326 of a 326 aa protein from Escherichia coli K12 ref: NP_416226.1 vitamin B12 transport permease protein	Vitamin B12 import system permease protein btuC	Vitamin B12 import system permease protein btuC	IPR000522: FecCD transport family ABC superfamily (membrane), vitamin B12 transport protein	similar to Salmonella typhi CT18 vitamin B12 transport system permease vitamin B12 transport system permease	Vitamin B12 import system permease protein btuC	Vitamin B12 import system permease protein btuC	Code: H; COG: COG4139 vitamin B12 transport permease protein	Code: H; COG: COG4139 vitamin B12 transport permease protein	Code: H; COG: COG4139 vitamin B12 transport permease protein	Vitamin B12 import system permease protein btuC	Puative vitamin B12 transport system permease protein	Vitamin B12 import system permease protein btuC	Puative vitamin B12 transport system permease protein	Putative vitamin B12 transport system permease protein	vitamin B12 transport permease protein Code: H; COG: COG4139	Putative vitamin B12 transport system permease protein	vitamin B12 transporter subunit: membrane component of ABC superfamily	Transport system permease protein precursor	Vtamin B12-transporter permease	Putative uncharacterized protein	Vitamin B12 import system permease protein btuC	
ECOLI01668	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	DNA-binding protein HU	DNA-binding protein HU	DNA-binding protein HU	DNA-binding protein HTa	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	DNA-binding protein, HU family	putative integration host factor, alpha subunit	Integration host factor subunit alpha	Integration host factor subunit alpha	identified by match to TIGR protein family HMM TIGR00988 integration host factor, alpha subunit	DNA-binding protein HU	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	Integration host factor subunit alpha	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE INTEGRATION HOST FACTOR ALPHA-SUBUNIT PROTEIN	Integration host factor subunit alpha	
ECOLI01669	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	similar to GB:J04809, SP:P00568,  and PID:178322; identified by sequence similarity; putative phenylalanyl-tRNA synthetase, beta subunit	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	Phenylalanyl-tRNA synthetase beta chain	
ECOLI01670	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	similar to SP:P37279,  and PID:435125; identified by sequence similarity; putative phenylalanyl-tRNA synthetase, alpha subunit	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	Phenylalanyl-tRNA synthetase alpha chain	
ECOLI01672	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	ribosomal protein L20, putative	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	similar to GB:Z25281,  and PID:395950; identified by sequence similarity; putative ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	50S ribosomal protein L20	
ECOLI01673	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	similar to GB:M33494, GB:M33491, GB:S55551, GB:M33492, GB:M33493, GB:M37488, GB:S66053, SP:P15157, SP:P20231, PID:179584, PID:339977, PID:339981, PID:339983, and PID:339985; identified by sequence similarity; putative ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	50S ribosomal protein L35	identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001 ribosomal protein L35	
ECOLI01674	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	similar to GB:X05231, GB:X54925, GB:M13509, GB:M15996, SP:P03956, PID:1688258, PID:180665, PID:180669, PID:30126,  and PID:38267; identified by sequence similarity; putative translation initiation factor 3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor If-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	
ECOLI01674	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	similar to GB:X05231, GB:X54925, GB:M13509, GB:M15996, SP:P03956, PID:1688258, PID:180665, PID:180669, PID:30126,  and PID:38267; identified by sequence similarity; putative translation initiation factor 3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor If-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	Translation initiation factor IF-3	
ECOLI01675	Threonyl-tRNA synthetase	similar to sp|P07236 Saccharomyces cerevisiae YKL194c MST1 threonine--tRNA ligase, mitochondrial, start by similarity	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	similar to uniprot|P07236 Saccharomyces cerevisiae YKL194c MST1 threonine--tRNA ligase;	Threonyl-tRNA synthetase	DEHA2D08206p;similar to uniprot|P07236 Saccharomyces cerevisiae YKL194C MST1 Mitochondrial threonyl-tRNA synthetase;	Threonyl-tRNA synthetase	similar to GB:Z11501, SP:P32121,  and PID:28851; identified by sequence similarity; putative threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	Threonyl-tRNA synthetase	


ECOLI01678	Uncharacterized protein ydiY	Putative salt-induced outer membrane protein	Putative outer membrane protein	conserved hypothetical protein	YdiY protein	Hypothetical protein ydiY	Putative uncharacterized protein	Putative uncharacterized protein VP2736	Putative uncharacterized protein	Putative salt-induced outer membrane protein	Residues 1 to 252 of 252 are 100 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli O157:H7 ref: NP_310455.1 orf, conserved hypothetical protein	Putative exported protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative salt-induced outer membrane protein	similar to Salmonella typhi CT18 putative outer membrane protein putative outer membrane protein	Putative uncharacterized protein	Putative exported protein	hypothetical protein	Putative salt-induced outer membrane protein	Putative salt-induced outer membrane protein	conserved hypothetical protein	Code: M; COG: COG3137 conserved hypothetical protein	Evidence 5 : No homology to any previously reported sequences putative orphan protein	Code: M; COG: COG3137 conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	protein of unknown function DUF481	putative salt-induced outer membrane protein	Putative uncharacterized protein	
ECOLI01679	6-phosphofructokinase isozyme 2	6-phosphofructokinase isozyme	Putative 6-phosphofructokinase	6-phosphofructokinase isozyme 2	6-phosphofructokinase	6-phosphofructokinase II; suppressor of pfkA	Putative 6-phosphofructokinase	Residues 2 to 310 of 310 are 100 pct identical to residues 1 to 309 of a 309 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288156.1 6-phosphofructokinase II; suppressor of pfkA	Carbohydrate kinase, PfkB family	Mb2054c, pfkB, len: 339 aa. Equivalent to Rv2029c, len: 339 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 339 aa overlap). Probable pfkB, phosphofructokinase (EC 2.7.1.-), similar to others eg P06999|K6P2_ECOLI 6-PHOSPHOFRUCTOKINASE I SOZYME 2 from E.  coli (309 aa), FASTA scores: opt: 705, E(): 0; (41.4% identity in 304 aa overlap); and LACC_STRMU phosphotagatosekinase (310 aa); etc. Contains PS00583 pfkB family of carbohydrate kinases signature 1. Probable phosphofructokinase pfkB (PHOSPHOHEXOKINASE)	IPR002173: Carbohydrate kinase, PfkB 6-phosphofructokinase II	similar to Salmonella typhi CT18 6-phosphofructokinase isozyme 6-phosphofructokinase isozyme	6-phosphofructokinase II	carbohydrate kinase, PfkB family	suppressor of pfkA; Code: G; COG: COG1105 6-phosphofructokinase II	ATP + D-FRUCTOSE 6-PHOSPHATE = ADP + D- FRUCTOSE 1,6-BISPHOSPHATE PFK-2 IS SENSITIVE TO INHIBITION BY FRUCTOSE 1,6-DIPHOSPHATE. Citation: Daldal, F. (1984) gene, 28:337-342 Daldal, F. (1983) J. Mol. Biol. 168:285-305 carbohydrate kinase, PfkB	suppressor of pfkA; Code: G; COG: COG1105 6-phosphofructokinase II	PfkB	suppressor of pfkA; Code: G; COG: COG1105 6-phosphofructokinase II	6-phosphofructokinase identified by match to protein family HMM PF00294	6-phosphofructokinase isozyme 2	PfkB	PfkB	6-phosphofructokinase II	PfkB	PfkB domain protein PFAM: PfkB domain protein KEGG: rsp:RSP_2334 carbohydrate kinase, PfkB	PfkB domain protein	PfkB domain protein PFAM: PfkB domain protein KEGG: pol:Bpro_2756 PfkB	PfkB domain protein PFAM: PfkB domain protein KEGG: mbo:Mb2054c probable phosphofructokinase PfkB (phosphohexokinase)	
ECOLI01680	Uncharacterized protein ydiZ	Hypothetical protein ydiZ	Uncharacterized protein ydiZ	Residues 1 to 96 of 96 are 98 pct identical to residues 1 to 96 of a 96 aa protein from Escherichia coli O157:H7 ref: NP_310457.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydiZ	conserved hypothetical protein	conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein ydiZ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein YdiZ	Putative uncharacterized protein	
ECOLI01681	Uncharacterized protein yniA	Uncharacterized protein slr1563	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein PM0587	Putative uncharacterized protein VV1727	Putative uncharacterized protein	Phosphatidylserine decarboxylase	Putative uncharacterized protein	Alr5126 protein	conserved hypothetical protein	Hypothetical protein yniA	fructosamine kinase	Uncharacterized protein VC_1539	Putative fructosamine kinase	hypothetical protein	hypothetical conserved protein	Putative uncharacterized protein	Uncharacterized protein VP1481	Uncharacterized protein yniA	Uncharacterized protein VV1_2562	Putative uncharacterized protein	Residues 1 to 286 of 286 are 99 pct identical to residues 1 to 286 of a 286 aa protein from Escherichia coli O157:H7 ref: NP_310458.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Similar to unknown protein YniA of Escherichia coli	Putative uncharacterized protein lp_1983	identified by similarity to OMNI:NTL01SA2473; match to protein family HMM PF03881 fructosamine kinase family protein	
ECOLI01682	Uncharacterized protein yniB	Hypothetical protein yniB	Putative membrane protein	Putative uncharacterized protein	Residues 1 to 178 of 178 are 98 pct identical to residues 1 to 178 of a 178 aa protein from Escherichia coli K12 ref: NP_416240.1 orf, conserved hypothetical protein	Putative yfeABCD regulator yfeE	Similar to probable membrane protein YniB of Escherichia coli	putative regulator	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative yfeABCD locus regulator	Putative regulator	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative yfeABCD locus regulator	Putative yfeABCD locus regulator	Putative uncharacterized protein yniB	YfeABCD locus regulator	Putative yfeABCD locus regulator	conserved hypothetical protein	YfeABCD locus regulator	conserved hypothetical protein	Putative regulatory protein	Putative transmembrane protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01683	Phosphatase yniC	Putative hydrolase	Putative haloacid dehalogenase hydrolase	hypothetical phosphatase	Hypothetical protein yniC	HAD-superfamily hydrolase, subfamily IA, variant 3 protein family	Putative hydrolase	HAD-superfamily hydrolase	Phosphatase yniC	Putative uncharacterized protein	Predicted phosphatase/phosphohexomutase	Residues 1 to 222 of 222 are 100 pct identical to residues 1 to 222 of a 222 aa protein from Escherichia coli O157:H7 ref: NP_310460.1 putative phosphatase	Putative uncharacterized protein	Putative had-superfamily hydrolase subfamily ia transmembrane protein	Similar to putative phosphatase YniC of Escherichia coli	Similar to beta-phosphoglucomutase hypothetical protein	Biological Process: metabolism (GO:0008152), Molecular Function: phosphoglycolate phosphatase activity (GO:0008967) HAD-superfamily hydrolase	IPR005833: Haloacid dehalogenase/epoxide hydrolase putative enzyme	similar to Salmonella typhi CT18 putative hydrolase putative hydrolase	Putative uncharacterized protein	Predicted phosphatase/phosphohexomutase Hypothetical protein	Putative enzyme	hAD-superfamily hydrolase subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1	Code: R; COG: COG0637 putative phosphatase	Code: R; COG: COG0637 putative phosphatase	Code: R; COG: COG0637 putative phosphatase	HAD-superfamily hydrolase subfamily IA, variant 3	HAD-superfamily hydrolase subfamily IA, variant 3	HAD-superfamily hydrolase identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509	
ECOLI01684	Inner membrane protein ydjM	Hypothetical protein ydjM	Putative uncharacterized protein	Putative uncharacterized protein	CDS_ID OB0317 hypothetical protein	BH2138 protein	Residues 1 to 172 of 172 are 100 pct identical to residues 29 to 200 of a 200 aa protein from Escherichia coli K12 ref: NP_416242.1 orf, conserved hypothetical protein	Putative membrane protein	B1728 protein	Similar to probable membrane protein YdjM of Escherichia coli	conserved membrane protein putative membrane-bound metal-dependent hydrolase	conserved hypothetical protein	IPR007404: Predicted membrane-bound metal-dependent hydrolase LexA regulated gene, putative SOS response	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative membrane protein	LexA regulated gene	Code: R; COG: COG1988 conserved hypothetical protein	Code: R; COG: COG1988 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG1988; orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Membrane protein	putative hydrolase identified by match to protein family HMM PF04307	Putative membrane protein	Predicted membrane-bound metal-dependent hydrolase	conserved hypothetical protein Code: R; COG: COG1988	Membrane protein	
ECOLI01685	Uncharacterized symporter ydjN	Sodium/dicarboxylate symporter family protein	Putative uncharacterized protein	Putative sodium:dicarboxylate family transmembrane symporter	Putative sodium:dicarboxylate symporter	L-cystine uptake protein tcyP	L-cystine uptake protein tcyP	L-cystine uptake protein tcyP	putative sodium/dicarboxylate symporter	Glutamate transporter	Neutral Amino Acid (Glutamate) Transporter	Hypothetical symporter ydjN	identified by match to protein family HMM PF00375 sodium:dicarboxylate symporter family protein	Sodium/dicarboxylate symporter	Putative sodium:dicarboxylate symporter	Sodium/dicarboxylate symporter	Part of a kinase	CDS_ID OB2714 sodium:glutamate symporter	Sodium/dicarboxylate symporter family protein	Putative uncharacterized protein	Sodium/dicarboxylate symporter	Residues 1 to 354 of 355 are 99 pct identical to residues 1 to 354 of a 463 aa protein from Escherichia coli K12 ref: NP_416243.1 part of a kinase	Neutral Amino Acid (Glutamate) Transporter	Putative transport protein	Proton/sodium-glutamate symport protein	Similar to proton/sodium-glutamate symport protein	identified by match to protein family HMM PF00375 sodium:dicarboxylate symporter family protein	Proton/sodium-glutamate symport protein	identified by match to protein family HMM PF00375 sodium/dicarboxylate symporter	
ECOLI01686	Uncharacterized protein ydjO	Residues 1 to 245 of 246 are 93 pct identical to residues 1 to 245 of a 271 aa protein from Escherichia coli K12 ref: NP_416244.1 orf, conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydjO	Putative uncharacterized protein ydjO	pseudo	Predicted protein	Predicted protein	Putative uncharacterized protein	
ECOLI01687	Cell division activator cedA	Cell division activator cedA	Cell division activator cedA	Residues 1 to 80 of 80 are 100 pct identical to residues 8 to 87 of a 87 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288164.1 orf, conserved hypothetical protein	cell division modulator, affects inhibition after overreplication of chromosome in dnaAcos mutants	similar to Salmonella typhi CT18 cell division activator CedA cell division activator CedA	Cell division activator cedA	conserved hypothetical protein	Cell division activator cedA	Cell division activator cedA	conserved hypothetical protein	cell division activator	Cell division activator CedA	Cell division activator	Putative uncharacterized protein	Cell division activator cedA	Cell division modulator	Cell division activator cedA	Putative uncharacterized protein	Cell division activator CedA	Putative uncharacterized protein	Putative uncharacterized protein	Cell division activator CedA	Cell division activator CedA	Cell division activator CedA	Cell division activator CedA	Cell division activator CedA	Cell division activator cedA	Cell division activator CedA	
ECOLI01688	Catalase HPII	Catalase	Catalase	Catalase HPII	Catalase	Catalase	Catalase	Catalase	Catalase	Catalase	Catalase	Catalase HPII	go_component: peroxisomal matrix [goid 0005782]; go_function: catalase activity [goid 0004096]; go_process: oxygen and reactive oxygen species metabolism [goid 0006800] Catalase A, putative	Product confidence : probable Gene name confidence : putative probable catalase C protein	Catalase	Catalase	Catalase	CDS_ID OB3262 catalase	similar to M55161-1|AAA24039.1| percent identity: 45 in 707 aa putative catalase	catalase	Catalase	Catalase	SCF91.26, catB, catalase (EC 1.11.1.6), len: 759 aa. Previously sequenced and characterised from Streptomyces coelicolor strain ATCC10147 EMBL:AF000419 fasta scores opt:5163 z-score:0.0 E(): 0.0 100.00% identity in 759 aa overlap. Contains two Prosite hits to PS00437 Catalase proximal heme-ligand signature and PS00438 Catalase proximal active site signature. Also contains a Pfam match to entry PF00199 catalase, Catalase. catalase (EC 1.11.1.6).	Residues 1 to 668 of 668 are 99 pct identical to residues 86 to 753 of a 753 aa protein from Escherichia coli O157:H7 ref: NP_310465.1 catalase HPII	Catalase	Catalase	Catalase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark catalase	IPR002226: Catalase catalase; hydroperoxidase HPII(III), RpoS dependent	
ECOLI04255	Putative transposon gamma-delta 80.3 kDa protein	ATPase involved in DNA repair	Putative uncharacterized protein	ATPase involved in DNA repair, putative	hypothetical protein	hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolase domain Evidence 5 : No homology to any previously reported sequences	ATPase involved in DNA repair	Putative uncharacterized protein tnpX	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01689	UPF0249 protein chbG	Putative uncharacterized protein	UPF0249 protein EF_3048	UPF0249 protein VV2897	UPF0249 protein chbG	UPF0249 protein BA_5440/GBAA_5440/BAS5055	UPF0249 protein lmo0191	UPF0249 protein BC_5208	Putative uncharacterized protein	hypothetical phospho-beta-glucosidase	UPF0249 protein chbG	identified by match to protein family HMM PF04794 conserved hypothetical protein	UPF0249 protein VC_1285	UPF0249 protein VP2633	UPF0249 protein chbG	CDS_ID OB2271 hypothetical protein	hypothetical protein	UPF0249 protein BH0913	UPF0249 protein TTE0334	UPF0249 protein VV1_1486	Residues 1 to 252 of 252 are 97 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288166.1 orf, conserved hypothetical protein	UPF0249 protein chbG	putative glucosidase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0249 protein YPTB2927	identified by similarity to OMNI:VC1285; match to protein family HMM PF04794 conserved hypothetical protein	cellobiose phosphotransferase system CelC	UPF0249 protein chbG	possible cellobiose phosphotransferase system protein	
ECOLI01690	6-phospho-beta-glucosidase	Glycosyl hydrolase, family 4	6-phospho-beta-glucosidase bglT	Phospho-beta-glucosidase B	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	identified by match to protein family HMM PF02056 6-phospho-beta-glucosidase	Alpha-galactosidase/6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	Phospho-beta-glucosidase; cryptic	CDS_ID OB0811 6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	Residues 1 to 450 of 450 are 99 pct identical to residues 1 to 450 of a 450 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288167.1 phospho-beta-glucosidase; cryptic	InterProMatches:IPR001088, 6-phospho-beta-glucosidase; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolism (GO:0005975) Glycoside Hydrolase Family 4	6-phospho-beta-glucosidase	IPR001088: Glycoside hydrolase, family 4 phospho-beta-glucosidase (cellobiose-6-phosphate hydrolase)	similar to Salmonella typhi CT18 phospho-beta-glucosidase B phospho-beta-glucosidase B	6-phospho-beta-glucosidase	Phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	Code: G; COG: COG1486 cryptic phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	glycoside hydrolase, family 4 PFAM: glycoside hydrolase, family 4 KEGG: xac:XAC3081 6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases	
ECOLI01691	HTH-type transcriptional regulator chbR	Putative cel operon repressor	Cel operon repressor	Negative transcriptional regulator of cel operon	CDS_ID OB3397 hypothetical protein	Cel operon repressor	IPR000005: Helix-turn-helix, AraC type; IPR003313: Arac protein, arabinose-binding/dimerisation; IPR007113: Cupin domain transcriptional repressor of cel operon (AraC/XylS family)	similar to Salmonella typhi CT18 putative cel operon repressor putative cel operon repressor	Cel operon repressor	Transcriptional repressor of cel operon	Code: K; COG: COG2207 negative transcriptional regulator of cel operon	Cell operon repressor	Cel operon repressor	transcriptional regulator, AraC family identified by match to protein family HMM PF00165	CelD transcriptional regulator	Cel operon repressor	Cel operon repressor	AraC-family transcriptional regulator	Transcriptional regulator, AraC family	Cel operon repressor	CelD transcriptional regulator	Transcriptional regulator, AraC family	Negative transcriptional regulator of cel operon	Transcriptional regulator, AraC family	Putative uncharacterized protein	Transcriptional regulator ChbR	Transcriptional regulator, AraC family	YobQ	Transcriptional regulator	
ECOLI01692	N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component	Phosphotransferase system cellobiose-specific component IIA	Phosphoenolpyruvate dependent phosphotransferase enzyme III-cellobiose	PTS system, cellobiose-specific IIA component	PTS system, diacetylchitobiose-specific IIA component	PTS system, cellobiose-specific IIA component	N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component	PTS system, IIA component	identified by match to protein family HMM PF02255 PTS system, cellobiose-specific IIA component	PTS system, cellobiose-specific IIA component	PTS system, cellobiose-specific IIa component	PTS system cellobiose-specific IIA component	PTS system, cellobiose-specific IIA component	N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component	PTS cellobiose-specific component IIA	PTS system, cellobiose-specific enzyme II, A component	Phosphotransferase system cellobiose-specific component IIA	Phosphotransferase system cellobiose-specific component IIA	Lin2457 protein	Residues 36 to 151 of 151 are 100 pct identical to residues 1 to 116 of a 116 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288169.1 PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin	PTS system, cellobiose-specific IIA component	Beta-glucosides PTS, EIIA	PTS system, cellobiose-specific IIA component	InterProMatches:IPR003188; Molecular Function: sugar porter activity (GO:0005351), Biological Process: transport (GO:0006810), Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401), Cellular Component: membrane (GO:0016020) phosphotransferase system (PTS) lichenan-specific enzyme IIA component	PTS system, cellobiose-specific enzyme II, A component	IPR003188: Phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit PTS family, sugar specific enzyme III for cellobiose, arbutin, and salicin	similar to Salmonella typhi CT18 phosphoenolpyruvate dependent phosphotransferase enzyme III-cellobiose phosphoenolpyruvate dependent phosphotransferase enzyme III-cellobiose	PTS system, cellobiose-specific IIA component	PTS system, cellobiose-specific IIA	
ECOLI01693	N,N'-diacetylchitobiose permease IIC component	Lmo2684 protein	PTS system, cellobiose-specific IIC component	PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin	Lin2832 protein	Residues 1 to 448 of 449 are 99 pct identical to residues 1 to 448 of a 452 aa protein from Escherichia coli K12 ref: NP_416251.1 PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin	PTS system, cellobiose-specific IIC component	PTS family, sugar specific enzyme II for cellobiose, arbutin, and salicin	similar to Salmonella typhi CT18 PTS system, cellobiose-specific IIC component PTS system, cellobiose-specific IIC component	pseudo	identified by similarity to SP:P46317; match to protein family HMM PF02378; match to protein family HMM TIGR00410 PTS system, beta-glucoside-specific, IIC component	PTS family sugar specific enzyme II for cellobiose, arbutin, and salicin	Code: G; COG: COG1455 PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin	PTS system, cellobiose-specific IIC component	PTS system, cellobiose-specific IIC component	CelB subunit of N,N'-diacetylchitobiose PTS permease	PTS system, cellobiose-specific IIC component	PTS system, cellobiose-specific IIC component	Complete genome	PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin; Code: G; COG: COG1455	PTS system, cellobiose-specific IIC component	PTS system, cellobiose-specific IIC component	PTS system, lactose/cellobiose family IIC subunit	PEP-dependent phosphotransferase enzyme II	Putative uncharacterized protein	PTS system, N,N'-diacetylchitobiose-specific IIC component	PTS system, lactose/cellobiose family IIC subunit	N,N'-diacetylchitobiose-specific enzyme IIC component of PTS	PTS system, cellobiose-specific IIC component	
ECOLI01694	N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component	Cellobiose-specific IIB component of PTS system	PTS system, cellobiose-specific IIB component	PTS system, diacetylchitobiose-specific IIB component	PTS system, cellobiose-specific IIB component	N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component	PTS system, IIB component	identified by match to protein family HMM PF02302 PTS system, cellobiose-specific IIB component	Putative PTS system sugar-specific EIIB component	N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component	CDS_ID OB2760 PTS system cellobiose-specific enzyme II B component	Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB, probable cellobiose specific	PTS system, cellobiose-specific component BII	PTS system, cellobiose-specific enzyme II, B component	Residues 1 to 106 of 106 are 99 pct identical to residues 1 to 106 of a 106 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288171.1 PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin	PTS system, cellobiose-specific IIB component	Cellobiose PTS, EIIB	PTS system, cellobiose-specific IIB component	PTS system, cellobiose-specific enzyme II, B component	cellobiose-specific PTS IIC	Cellobiose-specific PTS system IIB component	PTS family, sugar specific enzyme IIB for cellobiose, arbutin, and salicin	similar to Salmonella typhi CT18 PTS system, cellobiose-specific IIB component PTS system, cellobiose-specific IIB component	PTS system, cellobiose-specific IIB component	PTS system, cellobiose-specific IIB component	best blastp match gb|AAK34716.1| (AE006626) putative PTS system, enzyme IIB [Streptococcus pyogenes M1 GAS] putative PTS system, enzyme IIB	Putative Phosphotransferase system sugar-specific EIIB component	PTS family sugar specific enzyme IIB for cellobiose, arbutin, and salicin	PTS system, cellobiose-specific IIB component	
ECOLI01695	Osmotically-inducible lipoprotein E	Osmotically inducible lipoprotein E	Osmotically inducible lipoprotein E	Osmotically inducible lipoprotein E	Osmotically-inducible lipoprotein OsmE, putative	Osmotically-inducible lipoprotein E	Residues 1 to 112 of 112 are 100 pct identical to residues 1 to 112 of a 112 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288172.1 activator of ntrL gene	transcriptional activator of ntrL gene	similar to Salmonella typhi CT18 osmotically inducible lipoprotein E precursor osmotically inducible lipoprotein E precursor	Osmotically-inducible lipoprotein OsmE	Transcriptional activator of ntrL gene	identified by similarity to SP:P23933; match to protein family HMM PF04355 osmotically-inducible lipoprotein E	SmpA/OmlA	activator of ntrL gene	activator of ntrL gene	osmotically inducible lipoprotein OsmE	activator of ntrL	Osmotically inducible lipoprotein E	Osmotically inducible lipoprotein E	Osmotically inducible lipoprotein OsmE	osmotically inducible lipoprotein OsmE	putative osmotically-inducible lipoprotein OsmE Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type m : membrane component	activator of ntrL gene	Osmotically inducible lipoprotein E precursor	SmpA/OmlA domain protein precursor	SmpA/OmlA domain protein precursor	SmpA/OmlA domain protein precursor	Activator of ntrL gene	Putative uncharacterized protein	
ECOLI01696	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	Probable NH(3)-dependent NAD(+) synthetase	Probable NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	Probable NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	putative NAD synthase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	NH(3)-dependent NAD(+) synthetase	
ECOLI01698	Protein ves	pseudo	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Protein ves	Residues 1 to 212 of 212 are 98 pct identical to residues 1 to 212 of a 212 aa protein from Escherichia coli K12 ref: NP_416256.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein of unknown function DUF886, bacterial	Code: S; COG: COG3758 conserved hypothetical protein	Code: S; COG: COG3758 conserved hypothetical protein	protein of unknown function DUF886 PFAM: protein of unknown function DUF886: (4.4e-11) KEGG: sil:SPO2147 hypothetical protein, ev=7e-20, 43% identity	Protein ves	Hypothetical protein	protein of unknown function DUF886	Protein ves	protein of unknown function DUF886	protein of unknown function DUF886 PFAM: protein of unknown function DUF886 KEGG: bur:Bcep18194_A5479 protein of unknown function DUF886	protein of unknown function DUF886 PFAM: protein of unknown function DUF886 KEGG: pol:Bpro_1036 protein of unknown function DUF886	Hypothetical protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein Code: S; COG: COG3758	Bacterial protein of unknown function	Hypothetical protein	
ECOLI01697	Excinuclease cho	Excinuclease cho	Excinuclease cho	Excinuclease cho	Residues 1 to 259 of 259 are 100 pct identical to residues 37 to 295 of a 295 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288174.1 putative excinuclease subunit	IPR000305: Excinuclease ABC, C subunit, N-terminal putative nuclease subunit of the excinuclease complex	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Excinuclease ABC subunit C homolog	Excinuclease cho	excinuclease ABC subunit C homolog	Code: L; COG: COG0322 putative excinuclease subunit	Code: L; COG: COG0322 putative excinuclease subunit	excinuclease start codon not provided	Code: L; COG: COG0322 putative excinuclease subunit	Excinuclease subunit	Putative uncharacterized protein	Putative uncharacterized protein ydjQ	putative excinuclease subunit Code: L; COG: COG0322	endonuclease of nucleotide excision repair	Excinuclease Cho	Endonuclease in nucleotide excision repair	Putative uncharacterized protein	Excinuclease cho	Putative excinuclease	Endonuclease of nucleotide excision repair	Excinuclease cho	Excinuclease ABC C subunit domain protein	Excinuclease cho	Putative uncharacterized protein	
ECOLI01699	Spheroplast protein Y	Spheroplast protein Y	Putative exported protein	Periplasmic protein related to spheroblast formation	Residues 1 to 161 of 161 are 99 pct identical to residues 1 to 161 of a 161 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288176.1 periplasmic protein related to spheroblast formation	periplasmic protein related to spheroblast formation	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Periplasmic protein related to spheroblast formation	Code: UNTP; COG: COG3678 periplasmic protein related to spheroblast formation	periplasmic protein related to spheroblast formation; Code: UNTP; COG: COG3678 Spy	conserved hypothetical protein	periplasmic protein related to spheroblast formation; Code: UNTP; COG: COG3678 Spy	protein of unknown function, Spy-related	Spheroplast protein Y	Spheroplast protein y precursor, putative	Spheroplast protein Y	protein of unknown function, Spy-related PFAM: protein of unknown function, Spy-related KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related	protein of unknown function, Spy-related PFAM: protein of unknown function, Spy-related KEGG: son:SO4476 spheroplast protein y precursor, putative	putative periplasmic inhibitor/zinc-resistance associated protein	periplasmic protein related to spheroblast formation; Code: UNTP; COG: COG3678	protein of unknown function, Spy-related PFAM: protein of unknown function, Spy-related KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related	Hypothetical protein precursor	spheroplast protein Y precursor	spheroplast protein y precursor, putative KEGG: son:SO4476 spheroplast protein y precursor, putative	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	PFAM: protein of unknown function Spy-related KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related protein of unknown function Spy-related	KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related protein of unknown function, Spy-related	
ECOLI01700	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	hypothetical succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Residues 1 to 290 of 290 are 99 pct identical to residues 33 to 322 of a 322 aa protein from Escherichia coli K12 ref: NP_416258.1 orf, conserved hypothetical protein	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	succinylglutamate desuccinylase	similar to Salmonella typhi CT18 succinylglutamate desuccinylase succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme succinylglutamate desuccinylase	succinylglutamate desuccinylase	Succinylglutamate desuccinylase	Succinylglutamate desuccinylase	identified by similarity to SP:P76215; match to protein family HMM PF04952 succinylglutamate desuccinylase	identified by similarity to SP:P76215; match to protein family HMM PF04952 succinylglutamate desuccinylase	identified by similarity to SP:P76215; match to protein family HMM PF04952 succinylglutamate desuccinylase	Succinylglutamate desuccinylase/aspartoacylase	Code: E; COG: COG2988 conserved hypothetical protein	
ECOLI01701	N-succinylarginine dihydrolase	N-succinylarginine dihydrolase	N-succinylarginine dihydrolase	N-succinylarginine dihydrolase	N-succinylarginine dihydrolase	N-succinylarginine dihydrolase	N-succinylarginine dihydrolase	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1788041 (448 aa). BLAST with identity of 97% in 445 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	N-succinylarginine dihydrolase	succinylarginine dihydrolase	conserved gene succinylarginine dihydrolase	succinylarginine dihydrolase	N-succinylarginine dihydrolase	similar to Salmonella typhi CT18 succinylarginine dihydrolase succinylarginine dihydrolase	N-succinylarginine dihydrolase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme succinylarginine dihydrolase	COG3724 succinylarginine dihydrolase	Succinylarginine dihydrolase	N-succinylarginine dihydrolase	identified by similarity to SP:P76216; match to protein family HMM PF04996 succinylarginine dihydrolase	Succinylarginine dihydrolase	Code: E; COG: COG3724 conserved hypothetical protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9696779; Product type e : enzyme putative succinylarginine dihydrolase	Code: E; COG: COG3724 conserved hypothetical protein	N-succinylarginine dihydrolase	Succinylarginine dihydrolase	Succinylarginine dihydrolase	Succinylarginine dihydrolase	Succinylarginine dihydrolase COG3724	
ECOLI01702	N-succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	putative succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	Residues 1 to 474 of 492 are 98 pct identical to residues 1 to 474 of a 511 aa protein from Escherichia coli dbj: BAA15538.1 Succinate semialdehyde dehydrogenase (NAD(+)-dependent succinic semialdehyde dehydrogenase)	Succinylglutamic semialdehyde dehydrogenase	conserved gene succinylglutamic-5-semialdehyde dehydrogenase	Succinylglutamic semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	similar to Salmonella typhi CT18 succinylglutamic semialdehyde dehydrogenase succinylglutamic semialdehyde dehydrogenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme succinylglutamic semialdehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	identified by similarity to SP:P76217; match to protein family HMM PF00171 succinylglutamic semialdehyde dehydrogenase	identified by similarity to SP:P76217; match to protein family HMM PF00171 succinylglutamic semialdehyde dehydrogenase	identified by similarity to SP:P76217; match to protein family HMM PF00171 succinylglutamic semialdehyde dehydrogenase	Aldehyde dehydrogenase	Code: C; COG: COG1012 putative aldehyde dehydrogenase	N-succinylglutamate 5-semialdehyde dehydrogenase	aldehyde dehydrogenase	Aldehyde dehydrogenase	Aldehyde dehydrogenase	
ECOLI01703	Arginine N-succinyltransferase	Arginine N-succinyltransferase subunit beta	Putative arginine/ornithine succinyltransferase	Arginine N-succinyltransferase	Putative arginine N-succinyltransferase, beta chain	putative arginine/ornithine succinyltransferase	Arginine N-succinyltransferase	Arginine N-succinyltransferase	Arginine/ornithine succinyltransferase, putative	Arginine N-succinyltransferase	Arginine N-succinyltransferase, beta subunit	Arginine N-succinyltransferase, beta chain	Putative arginine/ornithine succinyltransferase	Arginine N-succinyltransferase	Arginine/ornithine N-succinyltransferase beta subunit	Residues 1 to 344 of 344 are 99 pct identical to residues 1 to 344 of a 344 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288180.1 orf, conserved hypothetical protein	Arginine N-succinyltransferase	arginine N-succinyltransferase, beta chain	conserved gene arginine/ornithine succinyltransferase	arginine N-succinyltransferase, beta chain	Arginine N-succinyltransferase	similar to Salmonella typhimurium arginine succinyltransferase arginine succinyltransferase	Arginine N-succinyltransferase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme arginine succinyltransferase	COG3138 arginine/ornithine N-succinyltransferase beta subunit	arginine N-succinyltransferase, beta chain	Arginine N-succinyltransferase, beta subunit	Arginine N-succinyltransferase	Arginine N-succinyltransferase	
ECOLI01704	Succinylornithine transaminase	similar to sp|P18544 Saccharomyces cerevisiae YOL140w ARG8 acetylornithine aminotransferase P4.45.f3.1, hypothetical start	Succinylornithine transaminase	Acetylornithine aminotransferase	Acetylornithine aminotransferase	Acetylornithine aminotransferase	Acetylornithine aminotransferase	Succinylornithine transaminase	Succinylornithine transaminase	identified by match to protein family HMM PF00202; match to protein family HMM TIGR00707 acetylornithine aminotransferase	go_component: mitochondrial matrix [goid 0005759]; go_function: acetylornithine transaminase activity [goid 0003992]; go_process: arginine biosynthesis [goid 0006526]; go_process: ornithine biosynthesis [goid 0006592] acetylornithine transaminase, putative	Succinylornithine transaminase	Succinylornithine transaminase	Acetylornithine aminotransferase	similar to Escherichia coli N-(alpha)-acetylornithine-(delta)-aminotransferase  gb: AAB51148.1 (406 aa). BLAST with identity of 99% in 407 aa.  This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Succinylornithine transaminase	identified by similarity to EGAD:10055; match to protein family HMM PF00202; match to protein family HMM TIGR00707 acetylornithine aminotransferase	IPR005814: Aminotransferase class-III succinylornithine transaminase, also has acetylornitine transaminase activity	similar to Salmonella typhi CT18 succinylornithine transaminase succinylornithine transaminase	Succinylornithine transaminase	identified by similarity to SP:P36839; match to protein family HMM PF00202; match to protein family HMM TIGR00707 acetylornithine aminotransferase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme succinylornithine transaminase (also has acetylornitine transaminase activity, PLP-dependent) (carbon starvation protein C)	Succinylornithine transaminase	Acetylornithine aminotransferase	Code: E; COG: COG4992 acetylornithine delta-aminotransferase	Code: E; COG: COG4992 acetylornithine delta-aminotransferase	Acetylornithine and succinylornithine aminotransferase	Succinylornithine aminotransferase	Acetylornithine and succinylornithine aminotransferase	

ECOLI01705	Exodeoxyribonuclease III	Exodeoxyribonuclease III	Putative uncharacterized protein	Exodeoxyribonuclease III	Exodeoxyribonuclease III	Exodeoxyribonuclease III	putative exodeoxyribonuclease III	Exodeoxyribonuclease III	Exodeoxyribonuclease III	Exodeoxyribonuclease III	Exodeoxyribonuclease III	Exodeoxyribonuclease III	Exodeoxyribonuclease III	Exonuclease III	Exodeoxyribonuclease III	Residues 5 to 272 of 272 are 99 pct identical to residues 1 to 268 of a 268 aa protein from Escherichia coli K12 ref: NP_416263.1 exonuclease III	Exodeoxyribonuclease III	Exodeoxyribonuclease III	Exodeoxyribonuclease III	Exodeoxyribonuclease A	IPR000097: AP endonuclease, family 1 exonuclease III, may repair singlet oxygen induced lesions	similar to Salmonella typhi CT18 exodeoxyribonuclease III exodeoxyribonuclease III	Exodeoxyribonuclease III	exodeoxyribonuclease III	exonuclease III; EXO III; Similar to: HI0041, EX3_HAEIN exodeoxyribonuclease III	Exonuclease III XthA protein	Exodeoxyribonuclease III	Exonuclease III	Exodeoxyribonuclease III	
ECOLI01706	TVP38/TMEM64 family membrane protein ydjX	Putative uncharacterized protein CPE1612	Putative uncharacterized protein	All5119 protein	Hypothetical protein ydjX	Putative uncharacterized protein	Membrane protein, putative	Membrane spanning protein	Putative uncharacterized protein cstA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1197	Putative membrane protein	Putative uncharacterized protein ydjX	CDS_ID OB2148 hypothetical protein	Membrane protein, putative	Uncharacterized conserved protein, YdjX/UPF0043 family	BH2293 protein	SCE46.15c possible integral membrane protein, len: 249 aa; similar to various hypothetical proteins, e.g.  SW:Y305_SYNY3 (EMBL:D64005) Synechocystis sp. hypothetical 22.2 kD protein SLR0305, 209 aa; fasta scores: opt: 419 z-score: 450.0 E(): 1e-17; 39.8% identity in 161 aa overlap putative integral membrane protein	Residues 1 to 252 of 252 are 95 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288183.1 orf, conserved hypothetical protein	Similar to conserved hypothetical protein. Predicted membrane protein. hypothetical protein	Similar to conserved hypothetical protein. Predicted membrane protein. hypothetical protein	Putative membrane-associated alkaline phosphatase	Putative uncharacterized protein	COG0398 Uncharacterized conserved protein hypothetical protein	Putative uncharacterized protein gbs0925	identified by Glimmer2; putative conserved hypothetical protein	best blastp match gb|AAK34136.1| (AE006568) hypothetical protein [Streptococcus pyogenes M1 GAS] hypothetical protein	transporter	
ECOLI01707	Uncharacterized protein ydjY	Putative uncharacterized protein ydjY	Residues 1 to 246 of 246 are 97 pct identical to residues 34 to 279 of a 279 aa protein from Escherichia coli K12 ref: NP_416265.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ydjY	hypothetical cytosolic protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ydjY	Putative uncharacterized protein ydjY	Putative uncharacterized protein ydjY	Putative uncharacterized protein ydjY	Putative uncharacterized protein ydjY	Predicted protein	Putative uncharacterized protein ydjY	YdjY protein	Predicted protein	Predicted protein	
ECOLI01708	TVP38/TMEM64 family inner membrane protein ydjZ	Putative uncharacterized protein CPE0579	Membrane protein, putative	Putative uncharacterized protein VV2308	All7589 protein	Putative membrane protein	Conserved hypothetical membrane protein	Lmo1500 protein	Uncharacterized ACR	Hypothetical Membrane Spanning Protein	Putative uncharacterized protein	Hypothetical protein ydjZ	membrane protein, putative	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Putative uncharacterized protein	Putative uncharacterized protein VP1027	Putative uncharacterized protein ydjZ	Putative uncharacterized protein	Lin1535 protein	Residues 1 to 234 of 235 are 98 pct identical to residues 1 to 234 of a 235 aa protein from Escherichia coli O157:H7 ref: NP_310485.1 orf, conserved hypothetical protein	Putative uncharacterized protein	identified by similarity to OMNI:NTL01SA0852 conserved hypothetical protein	membrane protein, putative	Hypothetical protein SE0659	Alkaline phosphatase-like protein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0925 putative membrane protein	conserved hypothetical protein	
ECOLI01709	Uncharacterized protein ynjA	conserved hypothetical protein	Hypothetical protein ynjA	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ynjA	Residues 32 to 165 of 165 are 99 pct identical to residues 49 to 182 of a 182 aa protein from Escherichia coli K12 ref: NP_416267.1 orf, conserved hypothetical protein	Similar to hypothetical protein hypothetical protein	conserved gene hypothetical protein	Similar to hypothetical protein hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Code: S; COG: COG2128 conserved hypothetical protein	Code: S; COG: COG2128 conserved hypothetical protein	carboxymuconolactone decarboxylase family protein identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778	conserved hypothetical protein identified by similarity to GB:BAC90309.1; match to protein family HMM PF02627; match to protein family HMM TIGR00778	Code: S; COG: COG2128; orf conserved hypothetical protein	Putative uncharacterized protein	Putative transposase fusion protein	Putative uncharacterized protein ynjA	alkylhydroperoxidase like protein, AhpD family TIGRFAM: alkylhydroperoxidase like protein, AhpD family PFAM: Carboxymuconolactone decarboxylase KEGG: bur:Bcep18194_B0093 alkylhydroperoxidase AhpD core	4-carboxymuconolactone decarboxylase domain protein identified by match to protein family HMM PF02627	Alkylhydroperoxidase like protein, AhpD family	Carboxymuconolactone decarboxylase	4-carboxymuconolactone decarboxylase domain protein identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778	conserved hypothetical protein KEGG: mpa:MAP3445 hypothetical protein	conserved hypothetical protein cytoplasmic protein function unknown but contains identity with antioxidant defence protein Ahp	Hypothetical protein	
ECOLI01710	Protein ynjB	Related to ABC transporter, periplasmic substrate -binding protein	putative ABC transporter, periplasmic substrate-binding protein	Protein ynjB	Extracellular solute-binding protein, putative	ABC transporter, periplasmic substrate-binding protein, putative	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative ABC transporter, periplasmic substrate- binding protein	Putative uncharacterized protein	SCE46.13c, possible secreted protein, len: 135 aa; similar to TR:CAC41457 (EMBL:AL591782) Rhizobium meliloti conserved hypothetical protein SMC02589, 408 aa; fasta scores: opt: 927 Z-score: 1029.9 E(): 9.8e-50; 37.198% identity in 414 aa overlap. Contains possible N-terminal region signal peptide sequence putative secreted protein	ABC-type uncharacterized transport system, periplasmic component	ABC transporter substrate-binding protein	ABC-type uncharacterized transport system, periplasmic component	Code: R; COG: COG4134 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative ABC-type transport system, periplasmic component	COG4134: ABC-type uncharacterized transport system periplasmic component. ABC transporter, periplasmic binding protein	Code: R; COG: COG4134 conserved hypothetical protein	conserved hypothetical protein identified by similarity to OMNI:NTL01SM00070	putative ABC-type transport system, periplasmic component	extracellular solute-binding protein, family 1	ABC transporter, periplasmic binding protein KEGG: rsp:RSP_0200 ABC transporter, periplasmic binding protein, ev=1e-121, 56% identity	Putative uncharacterized protein	Putative ABC-type transport system, periplasmic component precursor	ABC transporter, periplasmic substrate-binding protein, putative precursor	Putative uncharacterized protein ynjB	Putative secreted protein precursor	extracellular solute-binding protein, putative	ABC transporter substrate-binding protein	ABC-type transporter, periplasmic binding protein	
ECOLI01711	Inner membrane ABC transporter permease protein ynjC	Related to ABC transporter, permease protein	hypohetical ABC transporter, permeaseprotein	Hypothetical ABC transporter permease protein ynjC	ABC transporter, permease protein, putative	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN	Putative ABC transporter, permease protein	Putative transport system permease protein	SC10A5.29c, probable integral membrane protein, len: 589 aa; similar to many permeases eg. TR:Q44123 (EMBL:U050 42) iron utilisation protein AFUB from Actinobacillus pleur opneumoniae (687 aa), fasta scores; opt: 564 z-score: 426.3 E(): 1.5e-16, 25.0% identity in 547 aa overlap probable integral membrane protein	ABC-type uncharacterized transport system, permease component	ABC transporter permease protein	ABC-type uncharacterized transport system, permease component	ABC-type Fe3+ transport system permease component	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative ABC-type transport system, permease component	COG4135: ABC-type uncharacterized transport system permease component. ABC transporter, fused inner membrane subunits	binding-protein-dependent transport systems inner membrane component	binding-protein-dependent transport systems inner membrane component	Code: R; COG: COG4135 putative transport system permease protein	ABC transporter, fused inner membrane subunits KEGG: rsp:RSP_0201 ABC transporter, fused inner membrane subunits, ev=1e-169, 57% identity	Hypothetical ABC transporter permease protein YnjC	ABC transporter, permease protein, putative	Binding-protein-dependent transport systems inner membrane component precursor	ABC transporter, permease protein, putative precursor	Hypothetical ABC transporter permease protein ynjC	binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component KEGG: bbr:BB1044 inner membrane component of ABC transporter	inner membrane ABC transporter permease protein YnjC	ABC-type transporter, permease protein	Binding-protein-dependent transport systems inner membrane component	Putative iron ABC transporter	
ECOLI01712	Uncharacterized ABC transporter ATP-binding protein ynjD	Putative ATP-binding component of a transport system	Residues 1 to 228 of 228 are 98 pct identical to residues 19 to 246 of a 246 aa protein from Escherichia coli dbj: BAA15547.1 Inner membrane protein MalK	Code: R; COG: COG4136 putative ATP-binding component of a transport system	Code: R; COG: COG4136 putative ATP-binding component of a transport system	ABC transporter related	Code: R; COG: COG4136 putative ATP-binding component of a transport system	Hypothetical ABC transporter ATP-binding protein YnjD	Hypothetical ABC transporter ATP-binding protein ynjD	putative ATP-binding component of a transport system Code: R; COG: COG4136	ABC transporter ATP-binding protein PFAM: ABC transporter related SMART: AAA ATPase KEGG: ppr:PBPRA2116 putative ABC-type uncharacterized transport system ATPase component	conserved hypothetical ABC transporter ATP-binding protein YnjD	ABC transporter related	ABC transporter related	Putative ATP-binding component of a transport system	ABC transporter, ATP-binding protein	ABC transporter related	Predicted transporter subunit: ATP-binding component of ABC superfamily	ABC transporter, ATP-binding protein	ABC transporter related	ABC transporter, ATP-binding protein	Putative uncharacterized protein	ABC transporter related	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Putative ABC transporter ATP-binding component	Putative sulfate/thiosulfate transporter subunit: ATP-binding component of ABC superfamily transporter	Putative sulfate/thiosulfate transporter subunit: ATP-binding component of ABC superfamily transporter	
ECOLI01713	Putative thiosulfate sulfurtransferase ynjE	Related to thiosulfate sulfurtransferase	Putative thiosulfate sulfurtransferase sseA	putative thiosulfate sulfur transferase	Putative thiosulfate sulfurtransferase ynjE	Putative thiosulfate sulfurtransferase	Putative thiosulfate sulfur transferase	similar to AL583919-88|CAC30237.1| percent identity: 59 in 297 aa putative thiosulfate sulfurtransferase	similar to Escherichia coli K12 putative thiosulfate sulfur transferase gi: 1788054 (441 aa). BLAST with identity of 97% in 440 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Probable thiosulfate sulfurtransferase protein	SseA	probable thiosulfate sulfur transferase	thiosulfate sulfurtransferase	Code: P; COG: COG2897 putative thiosulfate sulfur transferase	Code: P; COG: COG2897 putative thiosulfate sulfur transferase	putative thiosulfate sulfurtransferase, putative identified by match to protein family HMM PF00581	Putative thiosulfate sulfurtransferase	thiosulfate sulfurtransferase	putative thiosulfate sulfurtransferase identified by match to protein family HMM PF00581	putative thiosulfate sulfurtransferase identified by match to protein family HMM PF00581	Rhodanese-like protein	Putative thiosulfate sulfurtransferase YnjE	Thiosulfate sulfurtransferase PFAM: Rhodanese domain protein KEGG: rsp:RSP_0885 thiosulfate sulfurtransferase, rhodanese-like	putative thiosulfate sulfurtransferase identified by match to protein family HMM PF00581	putative thiosulfate sulfurtransferase	Thiosulfate sulfurtransferase PFAM: Rhodanese domain protein KEGG: lxx:Lxx10550 thiosulfate sulfurtransferase	Rhodanese domain protein PFAM: Rhodanese domain protein KEGG: mmc:Mmcs_1291 rhodanese-like protein	Thiosulfate sulfur transferase	putative thiosulfate sulfurtransferase	
ECOLI01714	Inner membrane protein ynjF	Putative uncharacterized protein CPE0581	Phosphatidylglycerophosphate synthase	Conserved hypothetical membrane protein	putative phosphatidylglycerophosphate synthase	Hypothetical protein ynjF	Putative uncharacterized protein VC1667	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Putative uncharacterized protein VP1193	Putative cytochrome oxidase	SCE46.14, possible transmembrane protein, len: 205 aa; similar to TR:P76226 (EMBL:AE000270) Escherichia coli from bases 1830199 to 1840304, 208 aa; fasta scores: opt: 402 z-score: 471.0 E(): 6.9e-19; 37.4% identity in 206 aa overlap and to TR:CAB50482 (EMBL:AJ248288) Pyrococcus abyssi predicted CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase PgsA, 185 aa; fasta scores: opt: 216 z-score: 259.1 E(): 4.4e-07; 31.2% identity in 205 aa overlap putative transmembrane protein	Phosphatidylglycerophosphate synthase	Residues 1 to 208 of 208 are 99 pct identical to residues 1 to 208 of a 208 aa protein from Escherichia coli K12 ref: NP_416272.1 putative cytochrome oxidase	CDP-alcohol phosphatidyltransferase	Similar to conserved hypothetical protein, predicted membrane protein hypothetical protein	Similar to conserved hypothetical protein, predicted membrane protein hypothetical protein	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	Similar to Q8XMV7 Hypothetical protein CPE0581 from Clostridium perfrigens (195 aa). FASTA: opt: 348 Z-score: 432.5 E(): 3.1e-16 Smith-Waterman score: 348; 33.333 identity in 189 aa overlap. FTT1563 is more likely to be phosphatidylcoline synthase. ORF ftt1515c conserved hypothetical membrane protein	Phosphatidylglycerophosphate synthase	CDP-alcohol phosphatidyltransferase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative CDP-alcohol phosphatidyltransferase or Phosphatidylglycerophosphate synthase	Citation: Dryden SC, Dowhan W. J Bacteriol. 1996 178(4):1030-8. COG0558: Phosphatidylglycerophosphate synthase (PgsA). Phosphatidylglycerophosphate synthase	Code: I; COG: COG0558 putative cytochrome oxidase	CDP-alcohol phosphatidyltransferase	CDP-alcohol phosphatidyltransferase family protein identified by match to protein family HMM PF01066	CDP-alcohol phosphatidyltransferase	CDP-alcohol phosphatidyltransferase	CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase: (3.6e-10) KEGG: rsp:RSP_0198 phosphatidylglycerophosphate synthase, ev=2e-64, 64% identity	Putative uncharacterized protein	
ECOLI01716	Uncharacterized protein ynjH	Hypothetical protein ynjH	Putative exported protein	Putative uncharacterized protein	Residues 1 to 90 of 90 are 97 pct identical to residues 1 to 90 of a 90 aa protein from Escherichia coli K12 ref: NP_416274.1 orf, conserved hypothetical protein	Putative exported protein	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative exported protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein ynjH	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	
ECOLI01715	CTP pyrophosphohydrolase	Mutator mutT protein	Mutator MutT protein, putative	Mutator mutT protein	NTP pyrophosphohydrolase, MutT family	Putative MutT-family protein	Related to 7,8-dihydro-8-oxoguanine- triphosphatase	NTP pyrophosphohydrolases including oxidative damage repair enzymes	Nudix (MutT) family hydrolase/pyrophosphatase	CTP pyrophosphohydrolase	identified by match to TIGR protein family HMM TIGR00586 mutator mutT protein, putative	Mutator mutT protein	MutT/nudix family protein	MutT-like protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE MUTATOR PROTEIN 7,8-DIHYDRO-8-OXOGUANINE-TRIPHOSPHATASE	Mutator mutT protein	MUTATOR MUTT PROTEIN	Putative NUDIX-family hydrolase	Putative uncharacterized protein	mutator protein mutT	Putative mutator protein mutT	Nudix (MutT) family hydrolase/pyrophosphatase	Residues 1 to 135 of 135 are 97 pct identical to residues 1 to 135 of a 135 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288192.1 orf, conserved hypothetical protein	Putative pyrophosphohydrolase	Similar to mutator protein mutT	identified by match to protein family HMM PF00293 MutT/nudix family protein	identified by match to protein family HMM PF00293; match to protein family HMM TIGR00586 mutator mutT protein	MutT/nudix family protein	Mutator protein mutT	
ECOLI01717	NADP-specific glutamate dehydrogenase	NADP(%2B)-dependent glutamate dehydrogenase, synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh1p; expression regulated by nitrogen and carbon sources.  [Source:SGD;Acc:S000000058]	highly similar to sp|P39708 Saccharomyces cerevisiae YAL062w GDH3 NADP-glutamate dehydrogenase or sp|P07262 Saccharomyces cerevisiae YOR375c GDH1 glutamate dehydrogenase (NADP+), start by similarity	NADP-specific glutamate dehydrogenase [Source:GeneDB_Spombe;Acc:SPCC622.12c]	gi|5714368|gb|AAD47889.1|U29950_1 Kluyveromyces lactis NADP-glutamate dehydrogenase, start by similarity	NADP-specific glutamate dehydrogenase	DEHA2C17204p;uniprot|Q9HGS2 Debaryomyces hansenii GDH1 NADP- dependent glutamate dehydrogenase;	NADP-specific glutamate dehydrogenase	NADP-specific glutamate dehydrogenase	Glutamate dehydrogenase	Glutamate dehydrogenase, NADP-specific	GdhA	Glutamate dehydrogenase	Glutamate dehydrogenase	NADP-specific glutamate dehydrogenase	Probable NADP-specific glutamate dehydrogenase	NADP-specific glutamate dehydrogenase	NADP-specific glutamate dehydrogenase	NADP-specific glutamate dehydrogenase	NADP-specific glutamate dehydrogenase	NADP-specific glutamate dehydrogenase	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_function: glutamate dehydrogenase (NADP+) activity [goid 0004354]; go_process: glutamate biosynthesis [goid 0006537] glutamate dehydrogenase (NADP+), putative	Leucine dehydrogenase	NADP-specific glutamate dehydrogenase	glimmer prediction, with GLFV  domain (Glutamate/Leucine/Phenylalanine/Valine dehydrogenase) probable GdhA NADP-specific glutamate	pseudo	NADP-SPECIFIC GLUTAMATE DEHYDROGENASE	NADP-specific glutamate dehydrogenase	NAD-specific glutamate dehydrogenase	
ECOLI01718	Inner membrane protein ynjI	Residues 20 to 383 of 383 are 98 pct identical to residues 24 to 387 of a 387 aa protein from Escherichia coli K12 ref: NP_416276.1 orf, conserved hypothetical protein	Similar to unknown protein YnjI of Escherichia coli	orf conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ynjI	Putative uncharacterized protein ynjI	YnjI protein	Inner membrane protein ynji	Predicted inner membrane protein	Predicted inner membrane protein	pseudo predicted inner membrane protein, C-terminal part	Predicted inner membrane protein	
ECOLI01719	DNA topoisomerase 3	DNA TOPOISOMERASE III;04_1070, DNA TOPOISOMERASE III, TOP3_SCHPO, gene found by Glimmer;	DNA topoisomerase 3	DNA topoisomerase III	DNA topoisomerase 3	DNA topoisomerase	DNA topoisomerase 3	DNA topoisomerase	putative DNA topoisomerase III	DNA topoisomerase III	DNA topoisomerase 3	go_component: nucleus [goid 0005634]; go_function: DNA topoisomerase type I activity [goid 0003917]; go_process: regulation of DNA recombination [goid 0000018]; go_process: telomerase-dependent telomere maintenance [goid 0007004]; go_process: meiotic recombination [goid 0007131] DNA topoisomerase type I, putative	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase	Residues 20 to 672 of 672 are 99 pct identical to residues 1 to 653 of a 653 aa protein from Escherichia coli K12 ref: NP_416277.1 DNA topoisomerase III	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase III topB	IPR000380: DNA topoisomerase I DNA topoisomerase III	similar to Salmonella typhi CT18 DNA topoisomerase III DNA topoisomerase III	DNA topoisomerase	DNA topoisomerase	DNA topoisomerase III	Similar to: HI0444, TOP3_HAEIN DNA topoisomerase III	CHR28_tmp.0530, predicted protein, len = 867 aa, probably topoisomerase; predicted pI = 7.9702; good similarity to many eukaryotic topoisomerase proteins, contains a DNA topoisomerase domain and a N terminal toprim domain DNA topoisomerase III, putative	
ECOLI01720	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Putative selenophosphate synthase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	glimmer prediction selenide, water dikinase (selenophosphate synthetase), SelD	Selenide, water dikinase	Selenide, water dikinase	Selenide, water dikinase	Residues 3 to 349 of 349 are 99 pct identical to residues 1 to 347 of a 347 aa protein from Escherichia coli K12 ref: NP_416278.1 selenophosphate synthase, H(2)Se added to acrylyl-tRNA	Selenide, water dikinase	AIR synthase related protein:Selenide water dikinase	Selenide, water dikinase	SelD	selenophosphate synthase	similar to Salmonella typhi CT18 selenophosphate synthase selenophosphate synthase	Selenide, water dikinase	
ECOLI01721	Putative NAD(P)H nitroreductase ydjA	Putative uncharacterized protein	Putative NAD(P)H nitroreductase HI1542	Putative NADH dehydrogenase/NAD(P)H nitroreductase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Nitroreductase	Putative nitroreductase	Nitroreductase family protein	putative nitroreductase	Protein ydjA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Nitroreductase family protein	Putative nitroreductase	Nitroreductase family protein	Putative uncharacterized protein	Nitroreductase family protein	Putative nitroreductase	Putative NAD(P)H nitroreductase ydjA	hypothetical protein	Nitroreductase family proteins	Nitroreductase	BH0303 protein	Nitroreductase	Residues 1 to 177 of 177 are 98 pct identical to residues 7 to 183 of a 183 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288198.1 orf, conserved hypothetical protein	Putative nitroreductase	
ECOLI01722	Protease 4	Protease IV	Protease 4 homolog	Protease IV	Protease 4	Protease IV	Protease IV	Signal peptide peptidase SppA	SppA	Protease IV	Putative signal peptide peptidase sppA	Protease IV	Protease IV	Related to proteinase IV	Protease IV, signal peptide peptidase	Protease IV	putative protease IV	Protease IV	Protease IV	Signal peptide peptidase SppA, 67K type	Protease IV	Protease IV	Signal peptide peptidase SppA, 67K type	protease IV	Protease IV	Protease IV, a signal peptide peptidase	Signal peptide peptidase SppA	Protease IV	Protease IV	
ECOLI01723	L-asparaginase 1	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	Glutamyl-tRNA(Gln) amidotransferase subunit D	hypothetical L-asparaginase	Glutamyl-tRNA(Gln) amidotransferase subunit D	L-asparaginase I	L-asparaginase I	L-asparaginase I	L-Asparaginase I	L-asparaginase	L-asparaginase	L-asparaginase	putative L-asparaginase I	L-asparaginase I	L-asparaginase	L-asparaginase I	go_function: asparaginase activity [goid 0004067] asparaginase, putative	L-asparaginase I	L-asparaginase I	L-asparaginase	
ECOLI01724	Pyrazinamidase/nicotinamidase	hypothetical protein;similar to pyrazinamidase/nicotinamidase;	Nicotinamidase that converts nicotinamide to nicotinic acid as part of the NAD(%2B) salvage pathway, required for life span extension by calorie restriction; PNC1 expression responds to all known stimuli that extend replicative life span. [Source:SGD;Acc:S000003005]	similar to sp|P53184 Saccharomyces cerevisiae YGL037c PNC1 Related to pyrazinamidase/nicotinamidase, start by similarity	Nicotinamidase [Source:GeneDB_Spombe;Acc:SPBC365.20c]	similar to sp|P53184 Saccharomyces cerevisiae YGL037c PNC1 singleton, start by similarity	Pyrazinamidase/nicotinamidase, putative	Isochorismatase, putative	Pyrazinamidase/nicotinamidase	Isochorismatase	highly similar to uniprot|P53184 Saccharomyces cerevisiae YGL037c PNC1;	DEHA2C13552p;similar to uniprot|P53184 Saccharomyces cerevisiae YGL037C PNC1 NAD(+) salvage pathway;	Amidase related to nicotinamidase	180aa long hypothetical pyrazinamidase/nicotinamidase	Putative nicotinamidase	Probable pyrazinamidase/nicotinamidase	Pyrazinamidase/nicotinamidase	Amidase related to nicotinamidase	Pyrazinamidase/nicotinamidase pxnc	Pyrazinamidase/nicotinamidase-related protein	Pyrazinamidase/nicotinamidase	Pyrazinamidase/nicotinamidase	Amidases related to nicotinamidase	Putative pyrazinamidase/nicotinamidase	Pyrazinamidase/nicotinamidase	Pyrazinamidase/nicotinamidase	similar to SP:P21369; identified by sequence similarity; putative pyrazinamidase/nicotinamidase	Pyrazinamidase/nicotinamidase	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_component: peroxisome [goid 0005777]; go_function: nicotinamidase activity [goid 0008936]; go_process: chromatin silencing at ribosomal DNA [goid 0000183]; go_process: chromatin silencing at telomere [goid 0006348]; go_process: cell aging [goid 0007569]; go_process: nicotinate nucleotide salvage [goid 0019358] nicotinamidase, putative	
ECOLI01725	Inner membrane metabolite transport protein ydjE	Hypothetical metabolite transport protein ydjE	Putative transport protein	Residues 36 to 487 of 487 are 97 pct identical to residues 1 to 452 of a 452 aa protein from Escherichia coli K12 ref: NP_416283.1 putative transport protein	IPR005828: General substrate transporter; IPR007114: Major facilitator superfamily Hypothetical metabolite transport protein ydjE	PFAM00083 MFS type sugar transporter	transcript_id=ENSETET00000003526	Hypothetical metabolite transport protein YdjE	hypothetical protein similarity to COG0477 Permeases of the major facilitator superfamily(Evalue: 1E-91)	Hypothetical metabolite transport protein YdjE	putative metabolite transport protein	hypothetical protein	transcript_id=ENSOPRT00000002099	Major facilitator family transporter	Predicted transporter	Major facilitator family transporter	Major facilitator superfamily MFS_1	Major facilitator family transporter	Major facilitator superfamily MFS_1	transcript_id=ENSTTRT00000003210	Putative metabolite transport protein	Inner membrane metabolite transport protein YdjE	Inner membrane metabolite transport protein YdjE	pseudo	Putative transport protein	Putative transporter; MFS superfamily	Putative transporter; MFS superfamily	Putative transporter; MFS superfamily	Putative transporter; MFS superfamily	
ECOLI01726	Uncharacterized HTH-type transcriptional regulator ydjF	Putative L-fucose operon activator	Hypothetical transcriptional regulator ydjF	Putative DEOR-type transcriptional regulator	Residues 1 to 252 of 252 are 98 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288206.1 putative DEOR-type transcriptional regulator	probable transcriptional regulator (DeoR family); Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355) probable transcriptional regulator YulB	IPR001034: Bacterial regulatory protein, DeoR family Hypothetical transcriptional regulator ydjF	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	putative DeoR family transcriptional regulator similarity:fasta; SWALL:SRLR_ECOLI (SWALL:P15082); Escherichia coli; glucitol operon repressor; srlR; length 257 aa; id=34.53; ungapped id=34.81; E()=2.3e-21; 249 aa overlap; query 5-252 aa; subject 3-250 aa similarity:fasta; SWALL:Q9KWB9 (EMBL:AB039932); Agrobacterium rhizogenes; Riorf65 protein; riorf65; length 252 aa; id=43.37; ungapped id=43.37; E()=8.5e-33; 249 aa overlap; query 6-254 aa; subject 4-252 aa	Hypothetical transcriptional regulator YdjF	Putative DEOR-type transcriptional regulator	putative DEOR-type transcriptional regulator Code: KG; COG: COG1349	putative DEOR-type transcriptional regulator Z2808	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Putative DEOR-type transcriptional regulator	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Putative DEOR-type transcriptional regulator	Putative transcriptional regulator	Transcriptional regulator, DeoR family	Putative DNA-binding transcriptional regulator	
ECOLI01727	Uncharacterized oxidoreductase ydjG	Hypothetical oxidoreductase ydjG	probable oxidoreductase	Putative uncharacterized protein	Residues 1 to 326 of 326 are 99 pct identical to residues 1 to 326 of a 326 aa protein from Escherichia coli K12 ref: NP_416285.1 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR001395: Aldo/keto reductase Hypothetical oxidoreductase ydjG	Aldo/keto reductase	Code: C; COG: COG0667; orf conserved hypothetical protein	putative aldo-keto reductase protein similarity:fasta; SWALL:GS69_BACSU (SWALL:P80874); Bacillus subtilis; general stress protein 69; yhdN; length 331 aa; id=44.44; ungapped id=47.05; E()=3.1e-24; 324 aa overlap; query 10-328 aa; subject 6-316 aa similarity:fasta; SWALL:Q92W63 (EMBL:AL591985); Rhizobium meliloti; putative aldoketo reductase protein; length 331 aa; id=80.36; ungapped id=80.36; E()=1.8e-100; 331 aa overlap; query 1-331 aa; subject 1-331 aa	Hypothetical oxidoreductase YdjG	aldo/keto reductase PFAM: aldo/keto reductase KEGG: cch:Cag_1232 putative aldo/keto reductase	Hypothetical oxidoreductase YdjG	aldo/keto reductase PFAM: aldo/keto reductase KEGG: cch:Cag_1232 putative aldo/keto reductase	general stress protein 69 identified by match to protein family HMM PF00248	transcript_id=ENSSART00000012687	conserved hypothetical protein Code: C; COG: COG0667	putative oxidoreductase	Putative aldo/keto reductase	Aldo/keto reductase	Oxidoreductase, aldo/keto reductase family	Predicted oxidoreductase	Oxidoreductase, aldo/keto reductase family	Oxidoreductase, aldo/keto reductase family	Aldo/keto reductase	Putative oxidoreductase	Oxidoreductase, aldo/keto reductase family	Oxidoreductase, aldo/keto reductase family	
ECOLI01728	Uncharacterized sugar kinase ydjH	Uncharacterized sugar kinase MTH_1544	Carbohydrate kinase, PfkB family	Hypothetical sugar kinase ydjH	probable sugar kinase	Putative kinase	SCC77.07c, possible carbohydrate kinase, len: 396 aa. Weakly similar to many kinases including: Escherichia coli SW:RBSK_ECOLI(EMBL:M13169) ribokinase (EC 2.7.1.15) (309 aa), fasta scores opt: 283 z-score: 306.1 E(): 1.2e-09 29.3% identity in 297 aa overlap. Contains a Prosite hit to PS00584 pfkB family of carbohydrate kinases signature 2 and a Pfam match to entry PF00294 pfkB. Rich in the amino acid Ala. putative carbohydrate kinase	Residues 7 to 328 of 328 are 98 pct identical to residues 1 to 322 of a 322 aa protein from Escherichia coli K12 ref: NP_416286.1 putative kinase	IPR002139: Ribokinase; IPR002173: Carbohydrate kinase, PfkB Hypothetical sugar kinase ydjH	carbohydrate kinase	Carbohydrate/pyrimidine kinase	putative carbohydrate kinase	Ribokinase family Sugar kinases	PfkB	sugar kinase, ribokinase family	Code: G; COG: COG0524 putative kinase	putative ribokinase similarity:fasta; SWALL:RBSK_ECOLI (SWALL:P05054); Escherichia coli, and Escherichia coli O157:H7; ribokinase; name=rbsk; orderedlocusnames=b3752, z5253,ecs4694;; length 309 aa; 301 aa overlap; query 5-296 aa; subject 9-305 aa similarity:fasta; SWALL:Q8UBE8 (EMBL:AE009237); Agrobacterium tumefaciens str. C58; ribokinase; orderedlocusnames=atu3068;; length 298 aa; 297 aa overlap; query 1-297 aa; subject 1-297 aa	Hypothetical sugar kinase YdjH	Hypothetical sugar kinase YdjH	2-dehydro-3-deoxygluconokinase	2-dehydro-3-deoxygluconokinase	putative ATP-dependent phosphofructokinase (PFK-B family)	pseudo hypothetical protein submitted as non-pseudo	Ribokinase	putative kinase Code: G; COG: COG0524	ribokinase, pfkB family	Putative pfkB family carbohydrate kinase	PfkB	Carbohydrate kinase	
ECOLI01729	Uncharacterized protein ydjI	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	fructose-bisphosphate aldolase	Putative aldolase	Fructose-bisphosphate aldolase	Tagatose-bisphosphate aldolase	6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase	Lin2239 protein	Residues 1 to 278 of 278 are 98 pct identical to residues 1 to 278 of a 278 aa protein from Escherichia coli K12 ref: NP_416287.1 putative aldolase	COG0191 Fructose-tagatose bisphosphate aldolase fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	IPR000771: Ketose-bisphosphate aldolase, class-II Hypothetical protein ydjI	Putative uncharacterized protein gbs0125	identified by match to PFAM protein family HMM PF01116 fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	best blastp match sp|P82486|ALF_STRPY FRUCTOSE-BISPHOSPHATE ALDOLASE putative fructose-bisphosphate aldolase	fructose-bisphosphate aldolase, putative	fructose-bisphosphate aldolase	identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859 fructose-1,6-bisphosphate aldolase, class II	fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase COG0191 [G] Fructose/tagatose bisphosphate aldolase	Code: G; COG: COG0191 putative aldolase	Putative uncharacterized protein	
ECOLI01730	Uncharacterized zinc-type alcohol dehydrogenase- like protein ydjJ	Hypothetical zinc-type alcohol dehydrogenase-like protein ydjJ	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ALCOHOL DEHYDROGENASE PROTEIN	Oxidoreductase, zinc-binding dehydrogenase family	Putative oxidoreductase	similar to Escherichia coli K12 putative oxidoreductase gi: 1788073 (348 aa). BLAST with identity of 99% in 349 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Similar to xylitol	Xylitol dehydrogenase protein	IPR000205: NAD-binding site; IPR002328: Zinc-containing alcohol dehydrogenase Hypothetical zinc-type alcohol dehydrogenase-like	putative xylitol dehydrogenase	Alcohol dehydrogenase, zinc-binding	Zinc-containing alcohol dehydrogenase superfamily	Code: ER; COG: COG1063 putative oxidoreductase	Alcohol dehydrogenase GroES-like	oxidoreductase, zinc-binding dehydrogenase family identified by match to protein family HMM PF00107	probable zinc-dependent alcohol dehydrogenase protein Similar to SMc01992 [Sinorhizobium meliloti] and AGR_L_1091p [Agrobacterium tumefaciens] Similar to swissprot:Q92MT4 Putative location:bacterial inner membrane Psort-Score: 0.2296; go_function: oxidoreductase activity [goid 0016491]; go_function: zinc ion binding [goid 0008270]; go_function: alcohol dehydrogenase activity, zinc-dependent [goid 0004024]; go_function: D-xylulose reductase activity [goid 0046526]; go_process: bacteriochlorophyll biosynthesis [goid 0030494]	Hypothetical zinc-type alcohol dehydrogenase-like protein YdjJ	L-iditol 2-dehydrogenase identified by similarity to SP:Q06004; match to protein family HMM PF00107	Hypothetical zinc-type alcohol dehydrogenase-like protein ydjJ	D-xylulose reductase, putative	Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: bcn:Bcen_5063 alcohol dehydrogenase GroES-like	oxidoreductase, zinc-binding dehydrogenase family identified by match to protein family HMM PF00107	putative zinc-type alcohol dehydrogenase-like protein	Putative D-xylulose reductase	hypothetical protein	Alcohol dehydrogenase GroES domain protein	Oxidoreductase, zinc-binding dehydrogenase family	Sorbitol dehydrogenase	D-xylulose reductase	
ECOLI01731	Putative metabolite transport protein ydjK	Hypothetical metabolite transport protein ydjK	Putative transport protein	Residues 1 to 427 of 427 are 99 pct identical to residues 33 to 459 of a 459 aa protein from Escherichia coli K12 ref: NP_416289.1 putative transport protein	IPR007114: Major facilitator superfamily Hypothetical metabolite transport protein ydjK	go_component: membrane [goid 0016020]; go_function: myo-inositol transporter activity [goid 0005365]; go_process: myo-inositol transport [goid 0015798] related to hexose transporter protein, putative	Code: GEPR; COG: COG0477 putative transport protein	Hypothetical metabolite transport protein YdjK	Hypothetical metabolite transport protein YdjK	major facilitator family transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690	putative transport protein Code: GEPR; COG: COG0477	putative metabolite transport protein	Major facilitator family transporter	Predicted transporter	Major facilitator family transporter	Major facilitator superfamily MFS_1	Major facilitator family transporter	Transport protein	status:Predicted	Putative membrane transport protein	Inner membrane metabolite transport protein YdjE	Major facilitator family transporter	Putative membrane transport protein	Putative transport protein	Putative transporter; MFS superfamily	Putative transporter; MFS superfamily	Putative transporter; MFS superfamily	Putative transporter; MFS superfamily	Putative transporter; MFS superfamily	
ECOLI01732	Uncharacterized zinc-type alcohol dehydrogenase- like protein ydjL	NADPH:quinone reductase and related Zn-dependent oxidoreductases	Putative oxidireductase	Hypothetical zinc-type alcohol dehydrogenase-like protein ydjL	Putative quinone oxidoreductase	Putative oxidoreductase	Putative quinone oxidoreductase	SCGD3.24c, probable quinone oxidoreductase, len: 326 aa; similar to eukaryotic quinone oxidoreductases (some putative) e.g. SW:QOR_CAVPO (EMBL:M26936) Cavia porcellus zeta-crystallin/quinone reductase (329 aa), fasta scores; opt: 565 z-score: 588.2 E(): 2e-25, 32.6% identity in 328 aa overlap. Highly similar to TR:O65423 (EMBL:AL022603) Arabidopsis thaliana putative NADPH quinone oxidoreductase (325 aa) (57.2% identity in 325 aa overlap). Similar to SCE68.12c, S.coelicolor possible dehydrogenase (318 aa) (31.1% identity in 325 aa overlap).  Contains Pfam match to entry PF00107 adh_zinc, Zinc-binding dehydrogenases putative quinone oxidoreductase	Residues 1 to 358 of 358 are 99 pct identical to residues 1 to 358 of a 358 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288212.1 putative oxidoreductase	L-iditol 2-dehydrogenase	L-iditol 2-dehydrogenase sorbitol dehydrogenase	IPR002328: Zinc-containing alcohol dehydrogenase Hypothetical zinc-type alcohol dehydrogenase-like	identified by similarity to SP:Q06004; similarity to OMNI:NTL01BH0190; match to protein family HMM PF00107 sorbitol dehydrogenase	oxidoreductase, zinc-binding dehydrogenase family identified by match to protein family HMM PF00107	sorbitol dehydrogenase identified by match to protein family HMM PF00107	probable zinc-binding sorbitol dehydrogenase	Code: ER; COG: COG1063 putative oxidoreductase	putative quinone oxidoreductase similarity:fasta; with=UniProt:QOR_HUMAN (EMBL:HSQUINZ); Homo sapiens (Human).; CRYZ; Quinone oxidoreductase (EC 1.6.5.5) (NADPH:quinone reductase) (Zeta- crystallin).; length=329; id 32.530; 332 aa overlap; query 1-323; subject 8-327 similarity:fasta; with=UniProt:Q92RD5_RHIME (EMBL:SME591785); Rhizobium meliloti (Sinorhizobium meliloti).; PUTATIVE OXIDOREDUCTASE PROTEIN.; length=327; id 42.633; 319 aa overlap; query 10-323; subject 10-324	Hypothetical zinc-type alcohol dehydrogenase-like protein YdjL	Alcohol dehydrogenase, zinc-binding	Putative oxidoreductase	quinone oxidoreductase identified by match to protein family HMM PF00107; match to protein family HMM TIGR02824	Alcohol dehydrogenase, zinc-binding domain protein	Alcohol dehydrogenase, zinc-binding domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: sma:SAV4368 quinone oxidoreductase	oxidoreductase membrane protein function unknown, probably involved in cellular metabolism.	putative oxidoreductase Code: ER; COG: COG1063	putative oxidoreductase	Alcohol dehydrogenase, zinc-binding domain protein	Alcohol dehydrogenase zinc-binding domain protein	
ECOLI01733	Uncharacterized protein yeaC	Putative uncharacterized protein	conserved hypothetical protein	Hypothetical protein yeaC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2154	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 105 of 105 are 98 pct identical to residues 1 to 105 of a 105 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288213.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YeaC of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	general negative regulator of transcription subunit 1	Uncharacterized conserved protein	Putative cytoplasmic protein	This gene assignment is based partly on a multiple alignment of the best pairwise matches. conserved hypothetical protein	Code: S; COG: COG3139 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3139 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3139; orf conserved hypothetical protein	Putative cytoplasmic protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	
ECOLI01734	Peptide methionine sulfoxide reductase msrB	Peptide methionine sulfoxide reductase msrB	PilB-related protein	Peptide methionine sulfoxide reductase msrB	Putative uncharacterized protein	Peptide methionine sulfoxide reductase msrB (EC 1.8.4.12) (Peptide-methionine	Peptide methionine sulfoxide reductase msrB	Transcription regulator	PilB-related protein	Putative oxidoreductase	Putative methionine sulfoxide reductase family	Peptide methionine sulfoxide reductase msrB	Peptide methionine sulfoxide reductase msrB	Peptide methionine sulfoxide reductase msrB	Peptide methionine sulfoxide reductase msrB	Putative SelR domain containing protein	Peptide methionine sulfoxide reductase msrB (EC 1.8.4.12) (Peptide-methionine	Peptide methionine sulfoxide reductase msrB	Peptide methionine sulfoxide reductase msrB	Peptide methionine sulfoxide reductase msrB	Peptide methionine sulfoxide reductase msrB	Peptide methionine sulfoxide reductase msrB	Conserved domain frequently associated with peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase msrB	putative PilB-related protein	Peptide methionine sulfoxide reductase msrB (EC 1.8.4.12) (Peptide-methionine	similar to GP:14524192; identified by sequence similarity; putative PilB-related protein	Peptide methionine sulfoxide reductase msrB	Peptide methionine sulfoxide reductase msrB	
ECOLI01735	Glyceraldehyde-3-phosphate dehydrogenase A	highly similar to tr|Q9Y796 Cryptococcus curvatus Glyceraldehyde 3-phosphate dehydrogenase (EC 1.2.1.12) (GAPDH), hypothetical start	Glyceraldehyde-3-phosphate dehydrogenase 1 [Source:GeneDB_Spombe;Acc:SPBC32F12.11]	highly similar to sp|P00359 Saccharomyces cerevisiae YGR192c TDH3 glyceraldehyde-3-phosphate dehydrogenase 3, start by similarity	Glyceraldehyde-3-phosphate dehydrogenase	glyceraldehyde-3-phosphate dehydrogenase	Glyceraldehyde-3-phosphate dehydrogenase 1	Glyceraldehyde-3-phosphate dehydrogenase	GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE;07_0800, GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, G3P2_BACSU, gene found by Glimmer;	Glyceraldehyde-3-phosphate dehydrogenase	highly similar to uniprot|P00359 Saccharomyces cerevisiae YGR192c TDH3 glyceraldehyde-3-phosphate dehydrogenase 3 or uniprot|P00358 Saccharomyces cerevisiae YJR009c TDH2 or uniprot|P00360 Saccharomyces cerevisiae YJL052w TDH1;	DEHA2F04796p;highly similar to uniprot|P00359 Saccharomyces cerevisiae YGR192C TDH3 Glyceraldehyde-3-phosphate dehydrogenase 3 and highly similar to CA5892|CaGAP1 Candida albicans CaGAP1 Glyceraldehyde-3-phosphate dehydrogenase;	identified by match to PFAM protein family HMM PF03201 glyceraldehyde 3-phosphate dehydrogenase	Glyceraldehyde 3-phosphate dehydrogenase	GapdH	Glyceraldehyde 3-phosphate dehydrogenase	Glyceraldehyde 3-phosphate dehydrogenase 1	Glyceraldehyde-3-phosphate dehydrogenase	Glyceraldehyde-3-phosphate dehydrogenase 1	Glyceraldehyde-3-phosphate dehydrogenase	putative glyceraldehyde 3-phosphate dehydrogenase	Glyceraldehyde-3-phosphate dehydrogenase	Glyceraldehyde-3-phosphate dehydrogenase A	glyceraldehyde 3-phosphate dehydrogenase	Glyceraldehyde 3-phosphate dehydrogenase	Glyceraldehyde 3-phosphate dehydrogenase	go_component: lipid particle [goid 0005811]; go_component: cytosol [goid 0005829]; go_component: cell wall (sensu Fungi) [goid 0009277]; go_function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity [goid 0004365]; go_process: gluconeogenesis [goid 0006094]; go_process: glycolysis [goid 0006096] glyceraldehyde-3-phosphate dehydrogenase	Glyceraldehyde-3-phosphate dehydrogenase	Glyceraldehyde 3-phosphate dehydrogenase a	
ECOLI01736	UPF0010 protein yeaD	Glucose-6-phosphate 1-epimerase (hexose-6-phosphate mutarotase), likely involved in carbohydrate metabolism; GFP-fusion protein localizes to both the nucleus and cytoplasm and is induced in response to the DNA-damaging agent MMS. [Source:SGD;Acc:S000004705]	similar to sp|Q03161 Saccharomyces cerevisiae YMR099c singleton, start by similarity	Putative uncharacterized protein	UPF0010 protein HI1317	DEHA2E12892p;similar to uniprot|Q03161 Saccharomyces cerevisiae YMR099C Hypothetical ORF;	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Aldose 1-epimerase-related protein	pseudo	Uncharacterized enzymes related to aldose 1- epimerase	hypothetical protein	Hypothetical protein yeaD	Putative uncharacterized protein	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737] conserved hypothetical protein	Putative uncharacterized protein	Putative aldose 1-epimerase	Aldose 1-epimerase family protein	Conserved protein	Putative uncharacterized protein VP2158	Putative uncharacterized protein	Putative uncharacterized protein yeaD	similar to AE004955-1|AAG08807.1| percent identity: 27 in 241 aa conserved hypothetical protein	Uncharacterized enzyme related to aldose 1- epimerase	Residues 1 to 301 of 301 are 99 pct identical to residues 1 to 301 of a 301 aa protein from Escherichia coli K12 ref: NP_416294.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Aldose 1-epimerase	hypothetical protein	
ECOLI01737	Uncharacterized protein yeaE	Oxidoreductase	Putative oxidoreductase	Probable oxidoreductase	Aldo/keto reductase	Putative oxidoreductase	Putative aldo/keto reductase family oxidoreductase	Hypothetical protein yeaE	Putative aldo/keto reductase	Oxidoreductase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE OXIDOREDUCTASE PROTEIN	Putative aldo/keto reductase-family protein	Oxidoreductase, aldo/keto reductase family	Putative an aldehyde reductase	probable oxidoreductase	Putative oxidoreductase	Residues 1 to 253 of 253 are 87 pct identical to residues 1 to 284 of a 284 aa protein from Escherichia coli K12 ref: NP_416295.1 putative an aldehyde reductase	Oxidoreductase protein	IPR001395: Aldo/keto reductase putative aldehyde reductase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	Oxidoreductase	COG0656 aldo/keto reductases	Aldo/keto reductases, related to diketogulonate reductase ARA1 protein	Oxidoreductase, aldo/keto reductase family	Putative aldehyde reductase	oxidoreductase	Putative oxidoreductase	identified by match to protein family HMM PF00248 oxidoreductase, aldo/keto reductase family	Aldo/keto reductase	
ECOLI01738	MltA-interacting protein	MltA-interacting protein	MltA-interacting protein	Putative uncharacterized protein yeaF	Residues 1 to 248 of 248 are 99 pct identical to residues 1 to 248 of a 248 aa protein from Escherichia coli K12 ref: NP_416296.1 orf, conserved hypothetical protein	Putative exported protein	MltA-interacting protein	scaffolding protein for murein-synthesizing holoenzyme	similar to Salmonella typhi CT18 putative outer membrane protein putative outer membrane protein	Putative exported protein	Scaffolding protein for murein-synthesizing holoenzyme	Code: M; COG: COG3713 conserved hypothetical protein	Code: M; COG: COG3713 conserved hypothetical protein	MltA-interacting MipA	Code: M; COG: COG3713; orf conserved hypothetical protein	MltA-interacting protein	Hypothetical protein precursor	Oxygen-independent coproporphyrinogen III oxidase HemN	MltA-interacting MipA	MltA-interacting MipA precursor	Putative uncharacterized protein yeaF	Hypothetical protein precursor	MltA-interacting protein MipA identified by similarity to SP:P0A908; match to protein family HMM PF06629	Putative exported protein precursor	conserved hypothetical protein Code: M; COG: COG3713	Hypothetical protein precursor	MltA-interacting protein precursor	MltA-interacting MipA family protein precursor	Scaffolding protein for murein-synthesising holoenzyme	
ECOLI01739	Uncharacterized protein yeaG	Protein kinase	Serine protein kinase	Putative uncharacterized protein	Putative serine protein kinase	PrkA protein	Putative uncharacterized protein	Putative uncharacterized protein	Serine protein kinase	Probable serine protein kinase	Putative uncharacterized protein	putative Ser protein kinase	Serine protein kinase	Hypothetical protein yeaG	protein kinase	conserved hypothetical protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	PrkA protein	Putative uncharacterized protein	Putative uncharacterized protein	serine protein kinase	Putative uncharacterized protein VP0988	Uncharacterized protein yeaG	CDS_ID OB2654 serine protein kinase	
ECOLI01740	UPF0229 protein yeaH	UPF0229 protein CPE1333	UPF0229 protein PA0587	UPF0229 protein VV2350	Glycosyltransferase	UPF0229 protein yeaH	UPF0229 protein BA_0551/GBAA_0551/BAS0519	UPF0229 protein BC_0551	UPF0229 protein BT9727_0462	Putative uncharacterized protein	Conserved hypothetical protein	Stress response protein	UPF0229 protein yeaH	unknown	identified by match to protein family HMM PF04285 conserved hypothetical protein	UPF0229 protein VC_1873	Putative uncharacterized protein	Putative uncharacterized protein	UPF0229 protein SO_2883	UPF0229 protein ECA2349	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Conserved protein	UPF0229 protein PSPTO_0546	Putative uncharacterized protein	hypothetical conserved protein	UPF0229 protein VP0986	UPF0229 protein yeaH	CDS_ID OB2647 hypothetical protein	
ECOLI01741	Inner membrane protein yeaI	GGDEF domain protein	Putative uncharacterized protein yeaI	Code: T; COG: COG2199 conserved hypothetical protein	Code: T; COG: COG2199 conserved hypothetical protein	diguanylate cyclase (GGDEF domain)	Diguanylate cyclase precursor	Putative uncharacterized protein	diguanylate cyclase (GGDEF domain)	Putative uncharacterized protein yeaI	diguanylate cyclase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein KEGG: bcn:Bcen_2546 diguanylate cyclase	GGDEF domain protein identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254	GGDEF domain protein identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254	GGDEF domain protein	Hypothetical protein	conserved hypothetical protein	Diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase precursor	Diguanylate cyclase (GGDEF) domain protein	Diguanylate cyclase	Putative GGDEF signaling/response regulator protein	Predicted diguanylate cyclase	Diguanylate cyclase (GGDEF) domain protein	Diguanylate cyclase	Diguanylate cyclase (GGDEF) domain protein	Diguanylate cyclase	Diguanylate cyclase (GGDEF) domain protein	putative diguanylate cyclase	
ECOLI01742	Uncharacterized protein yeaJ	hypothetical protein	Hypothetical protein yeaJ	Putative uncharacterized protein 'yeaJ	IPR000160: GGDEF putative Methyl-accepting chemotaxis protein; Diguanylate cyclase/phosphodiesterase domain 1	similar to Salmonella typhimurium putative Methyl-accepting chemotaxis protein; Diguanylate cyclase/phosphodiesterase domain 1 putative Methyl-accepting chemotaxis protein; Diguanylate cyclase/phosphodiesterase domain 1	Putative methyl-accepting chemotaxis protein	Code: T; COG: COG2199 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yeaJ	conserved hypothetical protein	Putative uncharacterized protein	Diguanylate cyclase (GGDEF) domain protein	Predicted diguanylate cyclase	Diguanylate cyclase (GGDEF) domain protein	Diguanylate cyclase precursor	Diguanylate cyclase (GGDEF) domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative Methyl-accepting chemotaxis protein; Diguanylate cyclase/phosphodiesterase domain 1	Ggdef domain protein	Ggdef domain protein	Ggdef domain protein	Membrane protein	Ggdef domain protein	Diguanylate cyclase (GGDEF) domain protein	Membrane associated GGDEF protein	Ggdef domain protein	Putative uncharacterized protein	
ECOLI01743	Uncharacterized protein yeaK	Hypothetical protein yeaK	Uncharacterized protein yeaK	Residues 1 to 167 of 167 are 98 pct identical to residues 1 to 167 of a 167 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288223.1 orf, conserved hypothetical protein	Similar to unknown protein YeaK of Escherichia coli	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Hypothetical protein	Putative cytoplasmic protein	identified by match to protein family HMM PF04073 YbaK / prolyl-tRNA synthetases associated domain protein	Code: S; COG: COG2606 conserved hypothetical protein	Code: S; COG: COG2606 conserved hypothetical protein	conserved hypothetical protein	YbaK/prolyl-tRNA synthetase-like protein	conserved hypothetical protein, YbaK/prolyl-tRNA synthetase associated region	Code: S; COG: COG2606; orf conserved hypothetical protein	YbaK/prolyl-tRNA synthetase associated region	Putative uncharacterized protein	Putative uncharacterized protein	YbaK/prolyl-tRNA synthetase associated region PFAM: YbaK/prolyl-tRNA synthetase associated region KEGG: bur:Bcep18194_B1495 conserved hypothetical protein, YbaK/prolyl-tRNA synthetase associated region	YbaK/prolyl-tRNA synthetase associated region PFAM: YbaK/prolyl-tRNA synthetase associated region KEGG: bcn:Bcen_3920 YbaK/prolyl-tRNA synthetase associated region	conserved hypothetical protein	Hypothetical protein	YbaK/prolyl-tRNA synthetase associated region	YbaK/prolyl-tRNA synthetase associated region	Putative uncharacterized protein yeaK	Putative uncharacterized protein	YbaK/prolyl-tRNA synthetase-associated domain protein	
ECOLI01746	Uncharacterized HTH-type transcriptional regulator yeaM	Transcriptional regulator, AraC family	Putative transcriptional regulator	Hypothetical transcriptional regulator yeaM	Putative AraC-type regulatory protein	transcriptional regulator, (AraC/XylS family)	similar to Escherichia coli K12 putative ARAC-type regulatory protein gi: 1788091 (274 aa). BLAST with identity of 98% in 273 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	IPR000005: Helix-turn-helix, AraC type putative regulator (AraC/XylS family)	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Transcriptional regulator araC family	Putative regulator	identified by match to protein family HMM PF00165 transcriptional regulator, AraC family	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type r : regulator putative transcriptional regulator (AraC/XylS family)	Code: K; COG: COG2207 putative ARAC-type regulatory protein	transcriptional regulator, AraC family	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Transcriptional regulator, AraC family	Transcriptional Regulator, AraC family	Hypothetical transcriptional regulator YeaM	Transcriptional regulator, AraC family protein	Transcriptional regulator, AraC family	Hypothetical transcriptional regulator YeaM	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: rpc:RPC_1502 transcriptional regulator, AraC family	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: bcn:Bcen_4919 transcriptional regulator, AraC family	conserved hypothetical protein Code: K; COG: COG2207	putative transcriptional regulator	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	
ECOLI01745	Uncharacterized protein yeaL	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	UPF0756 membrane protein BA_4840/GBAA_4840/BAS4489	UPF0756 membrane protein lmo1568	UPF0756 membrane protein BC_4596	UPF0756 membrane protein BT9727_4324	Hypothetical protein yeaL	identified by match to protein family HMM PF04284 conserved hypothetical protein	UPF0756 membrane protein ECA1265	hypothetical conserved protein	UPF0756 membrane protein yeaL	UPF0756 membrane protein CA_C0092	UPF0756 membrane protein BH3161	UPF0756 membrane protein lin1603	Residues 1 to 148 of 148 are 100 pct identical to residues 1 to 148 of a 148 aa protein from Escherichia coli K12 ref: NP_416303.1 orf, conserved hypothetical protein	Putative membrane protein	UPF0756 membrane protein plu2726	UPF0756 membrane protein lp_1894	conserved membrane protein YtwI	conserved hypothetical protein	integral membrane protein putative membrane protein	putative membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Hypothetical protein	membrane protein, putative	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pm : putative membrane component putative membrane protein	
ECOLI01747	Inner membrane transport protein yeaN	Putative MFS (Major Facilitator Superfamily) transport protein	CynX-related transport protein, putative	Putative membrane protein	Related to transmembrane transport protein	Lmo0947 protein	Cyanate permease	Hypothetical transport protein yeaN	Putative transporter	identified by match to PFAM protein family HMM PF03806 cyanate transport system protein CynX, putative	Cyanate MFS transporter	cyanate transporter	CYANATE TRANSPORT PROTEIN CYNX	Putative amino acid/amine transport protein	ABC transporter	SCBAC12C8.04, possible integral membrane transport protein, len: 416aa: similar to many eg. TR:BAB35923 (EMBL:AP002558) putative amino acid/amine transport protein from Escherichia coli O157:H7 (393 aa) fasta scores; opt: 953, Z-score: 1012.0, 41.207% identity (41.645% ungapped) in 381 aa overlap. Contains Prosite match to PS00402 Binding-protein-dependent transport systems inner membrane comp sign. and multiple possible membrane-spanning hydrophobic regions. putative integral membrane transport protein	Lin0946 protein	Residues 1 to 326 of 353 are 99 pct identical to residues 1 to 326 of a 393 aa protein from Escherichia coli K12 ref: NP_416305.1 putative amino acid-amine transport protein	Probable MFS transporter	identified by similarity to SP:P76242 membrane protein, putative	probable transporter; Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021) Cyanate transport system protein	cyanate transporter	IPR007114: Major facilitator superfamily putative MFS family transport protein (amino acid/amine transport)	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	MFS transporter	transporter, putative	Conserved hypothetical protein	Cyanate MFS transporter	
ECOLI01748	Uncharacterized protein yeaO	Putative uncharacterized protein	Putative uncharacterized protein TVG1441436	Putative uncharacterized protein	Putative uncharacterized protein Ta0666	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative bacteriophage protein	Uncharacterized BCR	Putative uncharacterized protein	Putative uroporphyrin-III C-methyltransferase	Hypothetical protein yeaO	similar to GP:14026911; identified by sequence similarity; putative conserved hypothetical protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical conserved hypothetical protein	Putative uncharacterized protein	hypothetical conserved protein	Putative uncharacterized protein	Conserved protein	PUTATIVE UROPORPHYRIN-III C-METHYLTRANSFERASE	Putative uncharacterized protein yeaO	similar to AE000274-4|AAC74862.1| percent identity: 47 in 112 aa conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	
ECOLI01749	Uncharacterized protein yoaF	Hypothetical protein yoaF	Hemolysin protein, putative	Putative uncharacterized protein yoaF	Residues 1 to 85 of 85 are 99 pct identical to residues 1 to 85 of a 85 aa protein from Escherichia coli K12 gi: 1788094 orf, conserved hypothetical protein	Putative uncharacterized protein	putative hemolysin	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative hemolysin	Hypothetical protein	Code: R; COG: COG3042 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG3042 conserved hypothetical protein	putative haemolysin	Code: R; COG: COG3042; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yoaF	protein of unknown function DUF333 PFAM: protein of unknown function DUF333 KEGG: shm:Shewmr7_0123 protein of unknown function DUF333	protein of unknown function DUF333 PFAM: protein of unknown function DUF333 KEGG: son:SO0135 hemolysin protein, putative	protein of unknown function DUF333 PFAM: protein of unknown function DUF333 KEGG: rsp:RSP_2222 hypothetical protein	putative hemolysin	Hypothetical protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	PFAM: protein of unknown function DUF333 KEGG: shn:Shewana3_0128 protein of unknown function DUF333 protein of unknown function DUF333	KEGG: sbl:Sbal_4226 protein of unknown function DUF333 hypothetical protein	Putative uncharacterized protein yoaF	
ECOLI01750	Probable diguanylate cyclase yeaP	GGDEF family protein	Hypothetical protein yeaP	Putative uncharacterized protein	Putative uncharacterized protein VPA0476	Putative uncharacterized protein	SCK13.23, possible membrane protein, len: 366 aa; highly similar to C-terminal region of SW:YHUH_STRGR (EMBL:M77841) Streptomyces griseus hypothetical protein in HutH 5' region (fragment), 241 aa; fasta scores: opt: 1253 z-score: 1461.2 E(): 0; 81.0% identity in 242 aa overlap.  Contains Pfam match to entry PF00990 DUF9, Domain of unknown function DUF9. Contains possible hydrophobic membrane spanning region putative membrane protein	GGDEF domain protein	Residues 1 to 384 of 384 are 98 pct identical to residues 1 to 384 of a 384 aa protein from Escherichia coli K12 ref: NP_416308.1 orf, conserved hypothetical protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	GGDEF family protein	GGDEF	Code: T; COG: COG2203 conserved hypothetical protein	pseudo putative signaling protein (pseudogene)	Code: T; COG: COG2203; orf conserved hypothetical protein	Putative uncharacterized protein	Diguanylate cyclase with GAF sensor	diguanylate cyclase (GGDEF domain)	diguanylate cyclase (GGDEF domain) with GAF sensor	GGDEF/GAF domain protein	Putative uncharacterized protein yeaP	Response regulator containing a CheY-like receiver domain and a GGDEF domain	GAF/GGDEF-domain containing protein GAF/GGDEF-domain containing protein, Conserved hypothetical protein	GGDEF domain protein identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254	diguanylate cyclase with PAS/PAC sensor KEGG: pfl:PFL_2458 GGDEF domain protein TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein; PAS fold-4 domain protein SMART: PAS domain containing protein	diguanylate cyclase with GAF sensor TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein; GAF domain protein KEGG: vfi:VF2362 GGDEF family protein	Response regulator	Diguanylate cyclase with GAF sensor	conserved hypothetical protein	
ECOLI01751	UPF0410 protein yeaQ	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	UPF0410 protein yeaQ	Putative membrane protein	glimmer prediction.  Similar to TAG1_ECOLI an 84 TRANSGLYCOSYLASE ASSOCIATED PROTEIN. ACCESSION P76011 Hypothetical protein	Putative transglycosylase associated gene	UPF0410 protein yeaQ	SC5H1.32, possible membrane protein, len: 89 aa; unknown function, similar to e.g. SW:YEAQ_ECOLI (EMBL:AE000274), yeaQ, Escherichia coli hypothetical protein (82 aa), fasta scores; opt: 180 z-score: 242.2 E(): 3.6e-06, 35.2% identity in 71 aa overlap possible membrane protein	Putative membrane protein	Probable transmembrane protein	Putative uncharacterized protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative membrane protein	Similar to Bacteroides thetaiotaomicron hypothetical protein BT1436 SWALL:Q8A7T8 (EMBL:AE016931) (81 aa) fasta scores: E(): 1.3e-21, 80.24% id in 81 aa, and to Porphyromonas gingivalis W83 hypothetical protein PG2209 SWALL:AAQ67150 (EMBL:AE017179) (84 aa) fasta scores: E(): 2.1e-08, 48.68% id in 76 aa putative transmembrane protein, transglycosylase associated	Putative uncharacterized protein	Putative inner membrane protein	Transglycosylase-associated protein	Transglycosylase-associated protein	conserved hypothetical protein	Code: S; COG: COG2261 conserved hypothetical protein	Code: S; COG: COG2261 conserved hypothetical protein	conserved hypothetical protein	Transglycosylase-associated protein	Transglycosylase-associated protein	Code: S; COG: COG2261; orf conserved hypothetical protein	
ECOLI01752	Protein yoaG	Protein yoaG	Putative uncharacterized protein	Protein yoaG	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yoaG	Putative cytoplasmic protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved domain protein	Conserved domain protein	Conserved domain protein	Putative uncharacterized protein yoaG	Putative uncharacterized protein	Conserved domain protein	Putative uncharacterized protein	
ECOLI01753	Uncharacterized protein yeaR	Hypothetical protein yeaR	Putative uncharacterized protein	Uncharacterized protein yeaR	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	Code: P; COG: COG3615 conserved hypothetical protein	Code: P; COG: COG3615 conserved hypothetical protein	Code: P; COG: COG3615; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yeaR	Putative uncharacterized protein	Putative tellurite resistance protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yeaR	
ECOLI01754	Leucine efflux protein	Uncharacterized membrane protein PA4757	Leucine efflux protein	Putative transport-related membrane protein	Hypothetical protein yeaS	Homoserine/threonine efflux protein, putative	Leucine efflux protein	IPR001123: Lysine exporter protein (LYSE/YGGA) paral putative transport protein	similar to Salmonella typhi CT18 putative membrane transport protein putative membrane transport protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transport protein	Leucine efflux protein	Lysine exporter protein (LYSE/YGGA)	Code: E; COG: COG1280 conserved hypothetical protein	Lysine exporter family protein (LYSE/YGGA)	Code: E; COG: COG1280; orf conserved hypothetical protein	Lysine exporter protein	orf1 identified by match to protein family HMM PF01810	Leucine efflux protein	Lysine exporter protein (LYSE/YGGA)	Leucine efflux protein	Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA) KEGG: bur:Bcep18194_A4433 lysine exporter family protein (LysE/YggA)	Lysine exporter protein	Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA) KEGG: bcn:Bcen_0810 lysine exporter protein (LysE/YggA)	homoserine/threonine efflux protein, putative identified by match to protein family HMM PF01810	Lysine exporter family	Transporter, LysE family	putative transmembrane protein	Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA) KEGG: ecp:ECP_1745 probable transporter transmembrane protein YeaS	conserved hypothetical protein	
ECOLI01755	Uncharacterized HTH-type transcriptional regulator yeaT	Putative transcriptional regulator LYSR-type	PutativeLlysR-family transcriptional regulatory protein	PutativeLlysR-family transcriptional regulatory protein	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	regulatory protein, LysR:LysR, substrate-binding	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Transcriptional regulator, LysR family precursor	PutativeLlysR-family transcriptional regulatory protein	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bbr:BB4538 LysR family regulatory protein	PutativeLlysR-family transcriptional regulatory protein	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bcn:Bcen_5151 transcriptional regulator, LysR family	putative transcriptional regulator, LysR family Putative transcriptional regulator, LysR family, High confidence in function and specificity	putative transcriptional regulator, LysR family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	Transcriptional regulator	Putative LlysR-family transcriptional regulatory protein	Transcriptional regulator, LysR family precursor	Putative transcriptional regulator	Transcriptional regulator, LysR family	transcriptional regulator, LysR family unknown EC_number=4.2.1.1 PFAM: regulatory protein LysR; LysR substrate-binding KEGG: pen:PSEEN2133 transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	Substrate-binding transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative uncharacterized protein	
ECOLI01756	Probable tartrate dehydrogenase/decarboxylase	go_function: tartrate dehydrogenase activity [goid 0009027]; go_process: metabolism [goid 0008152] tartrate dehydrogenase, putative	Tartrate dehydrogenase	Tartrate dehydrogenase	Tartrate dehydrogenase	Putative tartrate dehydrogenase	CDS_ID OB0661 tartrate dehydrogenase	Putative tartrate dehydrogenase	Tartrate dehydrogenase	Tartrate dehydrogenase	similar to 3-isopropylmalate dehydrogenase; Biological Process: metabolism (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491) Isocitrate/isopropylmalate dehydrogenase	tartrate dehydrogenase	Tartrate dehydrogenase	Isocitrate/isopropylmalate dehydrogenase LeuB protein	identified by similarity to SP:Q51945; match to protein family HMM PF00180; match to protein family HMM TIGR02089 tartrate dehydrogenase	Tartrate dehydrogenase	Tartrate dehydrogenase	Code: CE; COG: COG0473 putative tartrate dehydrogenase	Citation: PMID: 10339827 FEMS Microbiol Lett. 1999 May 15;174(2):333-7. PMID: 8053675 Arch Biochem Biophys.  1994 Aug 15;313(1):15-21. Isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase	Code: CE; COG: COG0473 putative tartrate dehydrogenase	Tartrate dehydrogenase	tartrate dehydrogenase start codon not provided	Code: CE; COG: COG0473 putative tartrate dehydrogenase	Tartrate dehydrogenase	Tartrate dehydrogenase KEGG: sth:STH2344 tartrate dehydrogenase TIGRFAM: Tartrate dehydrogenase PFAM: isocitrate/isopropylmalate dehydrogenase	Tartrate dehydrogenase	hypothetical protein similarity to COG0473 Isocitrate/isopropylmalate dehydrogenase(Evalue: 2E-48)	Tartrate dehydrogenase	Tartrate dehydrogenase	
ECOLI01757	Uncharacterized transporter yeaV	Uncharacterized transporter yeaV	Choline/carnitine/betaine transporter family protein	Putative BCCT-family transporter	Glycine betaine/carnitine/choline transport protein	Putative BCCT-family carnitine transporter	Code: M; COG: COG1292 putative transport protein	Putative glycine/betaine/carnitine/choline transport protein	Code: M; COG: COG1292 putative transport protein	Putative BCCT-family transporter precursor	Putative carnitine transporter CniT	Choline-glycine betaine transporter	BCCT-family transporter precursor	putative betaine/choline/glycine transport protein (BCCT family) Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	Betaine/choline/glycine transport protein	BCCT-family transporter precursor	putative carnitine transporter CniT	Choline-glycine betaine transporter	TIGRFAM: choline/carnitine/betaine transporter PFAM: BCCT transporter KEGG: pen:PSEEN2131 betaine/choline/glycine transport protein (BCCT family) choline/carnitine/betaine transporter	Transporter, betaine/carnitine/choline transporter (BCCT) family	choline/carnitine/betaine transporter TIGRFAM: choline/carnitine/betaine transporter PFAM: BCCT transporter KEGG: pen:PSEEN2131 betaine/choline/glycine transport protein (BCCT family)	Choline/carnitine/betaine transporter	Predicted transporter	Transporter, betaine/carnitine/choline transporter (BCCT) family protein	Transporter, betaine/carnitine/choline transporter (BCCT) family	Choline/carnitine/betaine transporter	Transporter, betaine/carnitine/choline transporter (BCCT) family	Choline-glycine betaine transporter	Putative BCCT family transporter	
ECOLI01758	Putative dioxygenase subunit alpha yeaW	Putative ring-hydroxylating dioxygenase	Rieske 2Fe-2S family protein	unknown EC_number 1.14.1.- putative dioxygenase alpha subunit YeaW	Putative iron-sulfur protein	Putative iron-sulfur protein	PMID: 11258796 old EC_number=1.14.1.- best DB hits: BLAST: pir:G70946; probable dioxygenase (EC 1.14.-.-) Rieske iron-sulfur; E=4e-17 ddbj:BAA15597.1; (D90823) Benzene 1,2-dioxygenase a subunit (EC; E=2e-15 swissprot:P76253; YEAW_ECOLI PUTATIVE DIOXYGENASE ALPHA SUBUNIT; E=2e-15 COG: Rv3161c; COG2146 Ferredoxin subunits of nitrite reductase and; E=3e-18 PFAM: PF00355; Rieske [2Fe-2S] domain; E=4.6e-17 putative dioxygenase alpha subunit yeaW	Putative iron-sulfur protein	hypothetical protein	Putative dioxygenase subunit alpha yeaW	Putative ring hydroxylating dioxygenase alpha- subunit	Putative dioxygenase alpha subunit	Similar to choline monooxygenase hypothetical protein	conserved gene choline monooxygenase	Similar to choline monooxygenase hypothetical protein	Putative dioxygenase alpha subunit	iron-sulfur cluster-binding protein, rieske family domain protein	Rieske (2Fe-2S) region	Code: PR; COG: COG4638 conserved hypothetical protein	Code: PR; COG: COG4638 conserved hypothetical protein	Rieske (2Fe-2S) domain protein	putative rieske (2Fe-2S) family protein	putative dioxygenase	Code: PR; COG: COG4638; orf conserved hypothetical protein	Rieske (2Fe-2S) region PFAM: Rieske [2Fe-2S] region KEGG: pub:SAR11_1263 probable dioxygenase alpha chain	Rieske (2Fe-2S) domain protein	Putative dioxygenase alpha subunit	Rieske (2Fe-2S) region	Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein KEGG: ath:At4g29890 choline monooxygenase, putative (CMO-like)	
ECOLI01759	Putative dioxygenase subunit beta yeaX	Residues 1 to 321 of 321 are 98 pct identical to residues 1 to 321 of a 321 aa protein from Escherichia coli K12 ref: NP_416317.1 putative diogenase beta subunit	identified by match to protein family HMM PF00111; match to protein family HMM PF00175 oxidoreductase NAD-binding domain/2Fe-2S iron-sulfur cluster binding domain protein	Ferredoxin protein	Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region	Code: C; COG: COG1018 putative diogenase beta subunit	Code: C; COG: COG1018 putative diogenase beta subunit	Code: C; COG: COG1018 putative diogenase beta subunit	probable ferredoxin protein Similar to SMc04151 [Sinorhizobium meliloti] Similar to swissprot:Q92T79 Putative location:bacterial inner membrane Psort-Score: 0.1553; go_function: electron transporter activity [goid 0005489]; go_function: oxidoreductase activity [goid 0016491]; go_process: electron transport [goid 0006118]	vanillate O-demethylase oxidoreductase, putative	putative dioxygenase, beta subunit Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	Dioxygenase beta subunit	putative diogenase beta subunit Code: C; COG: COG1018	Vanillate O-demethylase oxidoreductase	Putative diogenase beta subunit	Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein	ferredoxin PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein KEGG: pen:PSEEN2129 dioxygenase, beta subunit	Predicted oxidoreductase	Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein	Ferredoxin	Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein	Flavodoxin reductase (Ferredoxin-NADPH reductase) family 1	Putative dioxygenase beta subunit	Putative dioxygenase beta subunit; FAD/NAD binding, 2Fe-2S ferredoxin domains	Family 1 flavodoxin reductase	Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein	Putative dioxygenase beta subunit	Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein	Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein	
ECOLI01760	Ribonuclease D	Ribonuclease D, putative	Ribonuclease D	Ribonuclease D	Ribonuclease D	Putative ribonuclease D	Ribonuclease D	Ribonuclease D	Rnd	Ribonuclease D	Ribonuclease D	Ribonuclease D	Ribonuclease D	Ribonuclease D	Related to ribonuclease D	Putative uncharacterized protein ML1040	hypothetical ribonuclease D	Ribonuclease D	similar to GP:17739552; identified by sequence similarity; putative ribonuclease D	Ribonuclease D	Ribonuclease D	Ribonuclease D	PMID: 3041371 best DB hits: BLAST: gb:AAG56793.1; AE005403_4 (AE005403) RNase D, processes tRNA; E=2e-32 pir:A83483; ribonuclease D PA1294 [imported] - Pseudomonas; E=3e-32 swissprot:P09155; RND_ECOLI RIBONUCLEASE D (RNASE D) -----; E=7e-32 COG: PA1294; COG0349 Ribonuclease D; E=3e-33 aq_1967; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase; E=3e-08 PFAM: PF01612; 3'-5' exonuclease; E=2e-31 PF00570; HRDC domain; E=0.00016 ribonuclease D	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE RIBONUCLEASE D PROTEIN	Ribonuclease D	Putative RNase D	Ribonuclease D	RIBONUCLEASE D	Ribonuclease D	
ECOLI01761	Long-chain-fatty-acid--CoA ligase	Long-chain-fatty-acid--CoA ligase	Long-chain-fatty-acid--CoA ligase	FadD	Long-chain-fatty-acid-CoA ligase	Long-chain-fatty-acid--CoA ligase	putative long-chain-fatty-acid-CoA ligase	Long-chain fatty-acid-CoA ligase	Long-chain-fatty-acid--CoA ligase	Long-chain-fatty-acid--CoA ligase	Long-chain-fatty-acid--CoA ligase	Long-chain-fatty-acid--CoA ligase	Long-chain-fatty-acid-CoA ligase	Long-chain-fatty-acid--CoA ligase	long-chain-fatty-acid-CoA-ligase	Acyl-CoA synthetase	Residues 23 to 583 of 583 are 99 pct identical to residues 1 to 561 of a 561 aa protein from Escherichia coli K12 ref: NP_416319.1 acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase	Long-chain-fatty-acid--CoA ligase	Probable long-chain-fatty-acid--coa ligase protein	Long-chain-fatty-acid--CoA ligase	Highly similar to acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase hypothetical protein	Long chain fatty-acid CoA ligase	Regulator of pathogenicity factors	Long-chain acyl-CoA synthetase protein	IPR000873: AMP-dependent synthetase and ligase; IPR001092: Basic helix-loop-helix dimerization domain bHLH acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)	similar to Salmonella typhi CT18 long-chain-fatty-acid--CoA ligase long-chain-fatty-acid--CoA ligase	RpfB protein	Long-chain-fatty-acid-CoA ligase	Long-chain-fatty-acid--CoA-ligase	
ECOLI01762	Uncharacterized lipoprotein yeaY	Putative lipoprotein	Hypothetical lipoprotein yeaY precursor	Outer membrane lipoprotein	Putative outer membrane protein	Residues 1 to 193 of 193 are 99 pct identical to residues 1 to 193 of a 193 aa protein from Escherichia coli K12 ref: NP_416320.1 putative outer membrane protein	Putative lipoprotein	Similar to hypothetical lipoprotein YeaY of Escherichia coli	putative outer membrane protein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	Putative outer membrane protein	Code: M; COG: COG3065 putative outer membrane protein	Code: M; COG: COG3065 putative outer membrane protein	Code: M; COG: COG3065 putative outer membrane protein	Outer membrane lipoprotein, Slp family	Putative lipoprotein precursor	Putative outer membrane protein	Lipoprotein precursor	Putative lipoprotein precursor	putative outer membrane protein Code: M; COG: COG3065	conserved predicted lipoprotein	Outer membrane lipoprotein, Slp family precursor	Putative outer membrane protein	Putative uncharacterized protein	Outer membrane protein Slp	Outer membrane lipoprotein, Slp family precursor	Outer membrane lipoprotein, Slp family precursor	Predicted lipoprotein	
ECOLI01763	M22 peptidase homolog yeaZ	Putative uncharacterized protein	Probable M22 peptidase homolog HI0388	Protease, putative	Probable glycoprotein endopeptidase	Glycoprotease family protein	Putative uncharacterized protein	Putative uncharacterized protein	Inactive homolog of metal-dependent protease	Putative uncharacterized protein STY1950	Putative uncharacterized protein	Glycoprotease protein family	Probable O-sialoglycoprotein endopeptidase	Conserved hypothetical protein	Glycoprotein endopeptidase	Hypothetical protease yeaZ	identified by match to protein family HMM PF00814 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein BUsg_315	Putative uncharacterized protein	Putative glycoprotein endopeptidase	Putative uncharacterized protein VP0866	Putative uncharacterized protein yeaZ	CDS_ID OB0646 glycoprotein endopeptidase	Non-proteolytic protein, peptidase family M22	Uncharacterized protein BU324	Inactive homolog of metal-dependent proteases	
ECOLI01764	Probable ATP-dependent helicase yoaA	Probable ATP-dependent helicase MJ0942	ATP-dependent helicase	ATP-dependent helicase	Probable ATP-dependent helicase HI0387	Putative ATP-dependent helicase	Putative dinG ATP-dependent helicase	Putative uncharacterized protein	Dnt	Rad3-related DNA helicase	ATP-dependent DNA helicase	Putative ATP-dependent helicase	Putative DnaQ family exonuclease/DinG family helicase	Related to ATP-dependent helicase	DinG protein	Rad3-related DNA helicases	ATP-dependent DNA helicase	Putative ATP-dependent DNA helicase-related protein	putative ATP-dependent helicase, DinG family	Probable ATP-dependent helicase yoaA	DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG	identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573; match to protein family HMM TIGR01407 DnaQ family exonuclease/DinG family helicase, putative	ATP-dependent helicase, DinG family	Probable ATP-dependent helicase	Probable ATP-dependent helicase	ATP-dependent helicase, DinG family	Putative ATP-dependent helicase	ATP-dependent DNA helicase	PMID: 92332449 best DB hits: BLAST: pir:E82133; ATP-dependent helicase, DinG family VC1990 [imported] -; E=4e-87 swissprot:P76257; YOAA_ECOLI PROBABLE ATP-DEPENDENT HELICASE YOAA; E=2e-84 gb:AAG56797.1; AE005403_8 (AE005403) putative enzyme [Escherichia; E=5e-84 COG: VC1990; COG1199 Rad3-related DNA helicases; E=4e-88 PFAM: PF00270; DEAD/DEAH box helicase; E=0.00011 PF00271; Helicase conserved C-terminal; E=0.5 ATP-dependent helicase, DinG family	
ECOLI01765	UPF0076 protein yoaB	Putative uncharacterized protein	Putative uncharacterized protein	UPF0076 protein HI1627	Putative uncharacterized protein	Putative uncharacterized protein	Putative endoribonuclease L-PSP family protein	Putative uncharacterized protein	Putative uncharacterized protein STY1952	Putative uncharacterized protein	putative translation initiation inhibitor, yjgF family	UPF0076 protein yoaB	identified by match to TIGR protein family HMM TIGR00004 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative endoribonuclease	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Endoribonuclease L-PSP family protein	Putative uncharacterized protein	TRANSLATION INITIATION INHIBITOR	Putative uncharacterized protein	hypothetical protein	Residues 1 to 130 of 130 are 99 pct identical to residues 1 to 130 of a 130 aa protein from Escherichia coli K12 ref: NP_416323.1 orf, conserved hypothetical protein	Putative translation initiation inhibitor	Putative uncharacterized protein	Similar to unknown protein Yoab of Escherichia coli	Putative uncharacterized protein	Putative uncharacterized protein	identified by match to protein family HMM PF01042 endoribonuclease L-PSP family protein	
ECOLI01766	Uncharacterized protein yoaC	Uncharacterized protein yoaC	Residues 1 to 119 of 119 are 100 pct identical to residues 1 to 119 of a 119 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288246.1 orf, conserved hypothetical protein	putative cytoplasmic protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yoaC	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yoaC	Putative uncharacterized protein yoaC	Putative uncharacterized protein yoaC	
ECOLI01767	UPF0181 protein yoaH	UPF0181 protein yoaH	UPF0181 protein yoaH	UPF0181 protein VC_A0569	UPF0181 protein ECA2377	UPF0181 protein VPA0916	UPF0181 protein yoaH	UPF0181 protein VV2_0310	Residues 1 to 59 of 59 are 96 pct identical to residues 1 to 59 of a 59 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288247.1 orf, conserved hypothetical protein	UPF0181 protein plu2693	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	hypothetical protein	UPF0181 protein yoaH	hypothetical protein	Code: S; COG: COG3140 conserved hypothetical protein	Code: S; COG: COG3140 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3140; orf conserved hypothetical protein	UPF0181 protein yoaH	UPF0181 protein yoaH	conserved hypothetical protein Code: S; COG: COG3140	Hypothetical protein	UPF0181 protein Ent638_2380	Putative uncharacterized protein yoaH	Putative uncharacterized protein	UPF0181 protein yoaH	UPF0181 protein Spro_2806	Putative uncharacterized protein	
ECOLI01768	Para-aminobenzoate synthase component 1	Para-aminobenzoate synthase component I	Anthranilate synthase component I-like protein	Anthranilate synthase component I related protein	Para-aminobenzoate synthase, component I	Para-aminobenzoate synthase component I	Para-aminobenzoate synthase, component I	Para-aminobenzoate synthase component I	putative para-aminobenzoate synthase, component I	Para-aminobenzoate synthase component I	anthranilate synthase component I	Para-aminobenzoate synthase, component I	Para-aminobenzoate synthase, component I	Para-aminobenzoate synthase component I	PMID: 3057324 best DB hits: BLAST: gb:AAG61067.1; AF322013_186 (AF322013) ID893 [Bradyrhizobium; E=7e-72 swissprot:P12679; PABB_KLEAE PARA-AMINOBENZOATE SYNTHASE COMPONENT; E=4e-59 gb:AAG56801.1; AE005404_4 (AE005404) p-aminobenzoate synthetase,; E=2e-57 COG: pabB; COG0147 Anthranilate/para-aminobenzoate synthases component I; E=4e-58 VC1303; COG0147 Anthranilate/para-aminobenzoate synthases component; E=4e-57 VNG0384G; COG0147 Anthranilate/para-aminobenzoate synthases; E=1e-45 PFAM: PF00425; chorismate binding enzyme; E=2.4e-103 para-aminobenzoate synthase component I	Para-aminobenzoate synthase, component I	anthranilate synthase component	Para-aminobenzoate synthase, component I	p-aminobenzoate synthetase, component I	Para-aminobenzoate synthetase component I	Para-Aminobenzoate synthase, component I	Residues 1 to 453 of 453 are 98 pct identical to residues 1 to 453 of a 453 aa protein from Escherichia coli O157:H7 ref: NP_310548.1 p-aminobenzoate synthetase component I	Para-aminobenzoate synthase component I	anthranilate synthase, component I	P-aminobenzoate synthase component I	similar to para-aminobenzoate synthase, component I hypothetical protein	conserved gene para-aminobenzoate synthase, component I	similar to para-aminobenzoate synthase, component I hypothetical protein	anthranilate synthetase alpha-subunit	
ECOLI01769	Uncharacterized Nudix hydrolase nudL	MutT/nudix family protein	Vng0274c	MutT/nudix family protein	Putative uncharacterized protein	MutT/nudix family protein	MutT/nudix family protein	Putative CoA pyrophosphatase/phosphohydrolase	NTP pyrophosphohydrolase, MutT family	Uncharacterized Nudix hydrolase nudL	NTP pyrophosphohydrolases including oxidative damage repair enzymes	Putative uncharacterized protein	Hypothetical MutT/nudix family protein	Hypothetical protein yeaB	Mut/nudix family protein	similar to GP:15157405; identified by sequence similarity; putative MutT/nudix family protein	MutT/nudix family protein	Putative uncharacterized protein	Putative uncharacterized protein	MutT/nudix family protein	Uncharacterized Nudix hydrolase nudL	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	MutT/nudix family protein	Pyrophosphatase, MutT/nudix family	PHOSPHOHYDROLASE	MutT/nudix family protein	Putative uncharacterized protein	Uncharacterized Nudix hydrolase nudL	hypothetical protein	
ECOLI01770	L-serine dehydratase 1	L-serine deaminase	L-serine deaminase 1	L-serine dehydratase 1	L-serine dehydratase 1	L-serine dehydratase 1	L-serine deaminase	Residues 1 to 454 of 454 are 99 pct identical to residues 1 to 454 of a 454 aa protein from Escherichia coli K12 ref: NP_416328.1 L-serine deaminase	L-serine dehydratase	Probable l-serine dehydratase (L-serine deaminase) protein	L-serine dehydratase 1	Similar to L-serine dehydratase hypothetical protein	L-serine deaminase I/L-threonine deaminase I	similar to Salmonella typhi CT18 L-serine deaminase 1 L-serine deaminase 1	L-serine dehydratase	L-serine deaminase I/L-threonine deaminase I	Code: E; COG: COG1760 L-serine deaminase	Code: E; COG: COG1760 L-serine deaminase	L-serine deaminase	Code: E; COG: COG1760 L-serine deaminase	L-serine dehydratase 1	L-serine dehydratase	L-serine dehydratase 1	L-serine dehydratase	L-serine dehydratase 1 KEGG: ecp:ECP_1757 L-serine dehydratase 1 TIGRFAM: L-serine dehydratase 1 PFAM: serine dehydratase alpha chain; serine dehydratase beta chain	L-serine dehydratase	L-serine deaminase Code: E; COG: COG1760	L-serine dehydratase	L-serine dehydratase 1	
ECOLI01771	Uncharacterized protein yoaD	Hypothetical protein yoaD	Putative uncharacterized protein	Residues 1 to 542 of 542 are 98 pct identical to residues 1 to 542 of a 542 aa protein from Escherichia coli K12 ref: NP_416329.1 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR001633: EAL domain putative diguanylate cyclase/phosphodiesterase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative diguanylate cyclase/phosphodiesterase	identified by match to protein family HMM PF00563 rtn protein	Code: T; COG: COG2200 conserved hypothetical protein	putative signaling protein	Putative diguanylate phosphodiesterase (EAL domain)	Putative uncharacterized protein	diguanylate phosphodiesterase (EAL domain)	Putative uncharacterized protein	diguanylate phosphodiesterase PFAM: EAL domain protein KEGG: bur:Bcep18194_B2992 diguanylate phosphodiesterase (EAL domain)	putative phosphodiesterase (EAL domain) Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	conserved hypothetical protein	conserved hypothetical protein	Diguanylate phosphodiesterase precursor	Diguanylate phosphodiesterase	Diguanylate phosphodiesterase	Diguanylate phosphodiesterase	PFAM: EAL domain protein; response regulator receiver KEGG: aha:AHA_0909 response regulator response regulator receiver modulated diguanylate phosphodiesterase	Putative uncharacterized protein yoaD	Putative uncharacterized protein	EAL domain protein	diguanylate phosphodiesterase PFAM: EAL domain protein KEGG: pen:PSEEN3057 phosphodiesterase (EAL domain)	
ECOLI01772	UPF0053 inner membrane protein yoaE	Putative membrane protein	UPF0053 inner membrane protein yoaE	Putative membrane protein	Putative membrane protein	Putative membrane protein	UPF0053 protein BUsg_314	Putative membrane protein	UPF0053 inner membrane protein yoaE	UPF0053 protein BU323	hypothetical protein	Residues 1 to 516 of 516 are 99 pct identical to residues 1 to 518 of a 518 aa protein from Escherichia coli O157:H7 ref: NP_310552.1 putative transport protein	Putative membrane protein	YoaE protein	Probable transmembrane protein	Membrane protein TerC	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Possible CorC/HlyC family of Mg+2/Co+2/heavy metal efflux pumps	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pm : putative membrane component putative membrane protein	UPF0053 protein bbp_300	Putative inner membrane protein	ortholog to Escherichia coli bnum: b1816; MultiFun: Cell structure 6.1 putative transmembrane protein	Code: R; COG: COG1253 putative transport protein	Code: R; COG: COG1253 putative transport protein	putative membrane protein	Code: R; COG: COG1253 putative transport protein	Putative uncharacterized protein	
ECOLI01773	PTS system mannose-specific EIIAB component	PTS system, mannose-specific IIAB components	Putative uncharacterized protein	PTS system, mannose-specific IIAB component	EIIMant PTS permease IIAB subunit	PTS system mannose-specific EIIAB component	PTS system, mannose-specific IIAB components	PTS system, mannose-specific IIab component	Putative mannose-specific phosphotransferase system component IIAB	Putative PTS system, mannose-specific component IIAB	PTS system mannose-specific EIIAB component	CDS_ID OB3375 PTS system mannose-specific enzyme II AB component	Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific	Mannose-specific phosphotransferase system component IIAB	Lin0143 protein	Residues 1 to 323 of 323 are 99 pct identical to residues 1 to 323 of a 323 aa protein from Escherichia coli K12 gb: AAC74887.1 PTS enzyme IIAB, mannose-specific	PTS system, mannose-specific IIAB component	PTS system, mannose-specific IIAB component	Mannose PTS, EIIAB	PTS system, mannose-specific IIAB component	mannose PTS system component IIAB	PTS system, mannose-specific IIAB component	mannose-specific PTS system component IIAB	Mannose-specific PTS system component IIAB	IPR004720: PTS system sorbose subfamily IIB component Sugar Specific PTS family, mannose-specific enzyme IIAB	similar to Salmonella typhi CT18 PTS system, mannose-specific IIAB component PTS system, mannose-specific IIAB component	Putative uncharacterized protein gbs0348	PTS system, mannose-specific IIAB components	PTS system, mannose-specific IIAB component	
ECOLI01774	Mannose permease IIC component	Phosphotransferase enzyme II, C component	Lmo0782 protein	Mannose permease IIC component	PTS system, mannose-specific IIc component	Mannose permease IIC component	Lin0775 protein	Residues 1 to 266 of 266 are 100 pct identical to residues 1 to 266 of a 266 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288254.1 PTS enzyme IIC, mannose-specific	PTS system, mannose-specific IIC component	PTS system, mannose-specific IIC component	Phosphotransferase enzyme II, C component	Sugar Specific PTS family, mannose-specific enzyme IIC	similar to Salmonella typhi CT18 phosphotransferase enzyme II, C component phosphotransferase enzyme II, C component	PTS system, mannose-specific IIC component	identified by similarity to SP:P08187; match to protein family HMM PF03609; match to protein family HMM TIGR00822 PTS system, mannose/fructose/sorbose family, IIC component	Hypothetical protein	Mannose-specific enzyme IIC	mannose-specific phosphotransferase system IIC component	ortholog to Escherichia coli bnum: b1818; MultiFun: Cell structure 6.1; Metabolism 1.1.1; Transport 4.4.A.6, 4.S.116 PTS family enzyme IIC, mannose-specific	Code: G; COG: COG3715 PTS enzyme IIC, mannose-specific	Code: G; COG: COG3715 PTS enzyme IIC, mannose-specific	PTS system mannose-specific IIC component ManY	PTS system, mannose-specific IIC component COG3715 [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC	PTS system, mannose-specific IIC component	PTS system, mannose-specific IIC component	PTS enzyme IIC, mannose-specific	phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC	Protein-N(Pi)-phosphohistidine-sugar phosphotransferase	mannose-specific PTS system component IIC	
ECOLI01775	Mannose permease IID component	Phosphotransferase enzyme II, D component	Lmo0781 protein	Mannose permease IID component	PTS system, mannose-specific iid component	PTS system fructose/mannose-specific IID component	Mannose permease IID component	Lin0774 protein	Residues 1 to 286 of 286 are 97 pct identical to residues 1 to 286 of a 286 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288255.1 PTS enzyme IID, mannose-specific	PTS system, mannose-specific IID component	PTS system, mannose-specific IID component	InterProMatches:IPR004704; Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401), Cellular Component: integral to membrane (GO:0016021) phosphotransferase system (PTS) fructose-specific enzyme IID component	Phosphotransferase enzyme II, D component	IPR004704: PTS system mannose/fructose/sorbose family IID component Sugar Specific PTS family, mannose-specific enzyme IID	similar to Salmonella typhi CT18 phosphotransferase enzyme II, D component phosphotransferase enzyme II, D component	PTS system, mannose-specific IID component	identified by match to protein family HMM PF03613; match to protein family HMM TIGR00828 PTS system, mannose/fructose/sorbose family, IID component	Hypothetical protein	Mannose-specific enzyme IID	mannose-specific phosphotransferase system IID component	ortholog to Escherichia coli bnum: b1819; MultiFun: Cell structure 6.1; Metabolism 1.1.1; Transport 4.4.A.6, 4.S.116 PTS family enzyme IID, mannose-specific	Code: G; COG: COG3716 PTS enzyme IID, mannose-specific	Code: G; COG: COG3716 PTS enzyme IID, mannose-specific	PTS system mannose-specific IID component ManZ	Code: G; COG: COG3716 PTS enzyme IID, mannose-specific	PTS system, mannose-specific IID component	PTS system, mannose-specific IID component	PTS enzyme IID, mannose-specific	PTS system mannose/fructose/sorbose family IID component protein	
ECOLI01776	UPF0266 membrane protein yobD	UPF0266 membrane protein yobD	UPF0266 membrane protein lmo0779	UPF0266 membrane protein yobD	UPF0266 membrane protein ECA2388	UPF0266 membrane protein yobD	UPF0266 membrane protein lin0773	Residues 1 to 150 of 158 are 99 pct identical to residues 1 to 150 of a 152 aa protein from Escherichia coli K12 ref: NP_416334.1 orf, conserved hypothetical protein	UPF0266 membrane protein YPO1755/y2554/YP_1637	UPF0266 membrane protein plu2700	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	UPF0266 membrane protein YPTB1631	identified by similarity to OMNI:NTL01LI0768; match to protein family HMM PF06173 conserved hypothetical protein	Hypothetical protein	UPF0266 membrane protein yobD	Code: S; COG: COG4811 conserved hypothetical protein	Code: S; COG: COG4811 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG4811; orf conserved hypothetical protein	UPF0266 membrane protein yobD	Putative membrane protein	UPF0266 membrane protein yobD	Hypothetical protein	Membrane protein	Putative membrane protein	Complete genome	conserved hypothetical protein Code: S; COG: COG4811	Membrane protein	
ECOLI01776	UPF0266 membrane protein yobD	UPF0266 membrane protein yobD	UPF0266 membrane protein lmo0779	UPF0266 membrane protein yobD	UPF0266 membrane protein ECA2388	UPF0266 membrane protein yobD	UPF0266 membrane protein lin0773	Residues 1 to 150 of 158 are 99 pct identical to residues 1 to 150 of a 152 aa protein from Escherichia coli K12 ref: NP_416334.1 orf, conserved hypothetical protein	UPF0266 membrane protein YPO1755/y2554/YP_1637	UPF0266 membrane protein plu2700	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	UPF0266 membrane protein YPTB1631	identified by similarity to OMNI:NTL01LI0768; match to protein family HMM PF06173 conserved hypothetical protein	Hypothetical protein	UPF0266 membrane protein yobD	Code: S; COG: COG4811 conserved hypothetical protein	Code: S; COG: COG4811 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG4811; orf conserved hypothetical protein	UPF0266 membrane protein yobD	Putative membrane protein	UPF0266 membrane protein yobD	Hypothetical protein	Membrane protein	Putative membrane protein	Complete genome	conserved hypothetical protein Code: S; COG: COG4811	Membrane protein	
ECOLI01778	Ribosomal RNA large subunit methyltransferase A	rRNA methyltransferase	SAM-dependent methyltransferase	rRNA guanine-N1-methyltransferase	putative SAM-dependent methyltransferase	Ribosomal RNA large subunit methyltransferase A	rRNA (Guanine-N1-)-methyltransferase	RRNA (Guanine-N1-)-methyltransferase	Ribosomal RNA large subunit methyltransferase A	Ribosomal RNA large subunit methyltransferase A	PMID: 9440525 best DB hits: BLAST: swissprot:P36999; RRMA_ECOLI RIBOSOMAL RNA LARGE SUBUNIT; E=2e-21 gb:AAG56811.1; AE005405_2 (AE005405) putative enzyme [Escherichia; E=1e-20 pir:F83500; rRNA methyltransferase PA1161 [imported] - Pseudomonas; E=4e-20 COG: rrmA; COG0500 SAM-dependent methyltransferases; E=2e-22 ribosomal RNA large subunit methyltransferase A	rRNA (Guanine-N1-) methyltransferase	rRNA large subunit methyltransferase A, putative	Putative ribosomal RNA methyltransferase	Putative resistance protein	RRNA (Guanine-N1-)-methyltransferase	Putative enzyme	SAM-dependent methyltransferase	Residues 1 to 269 of 269 are 99 pct identical to residues 1 to 269 of a 269 aa protein from Escherichia coli K12 ref: NP_416336.1 putative enzyme	rRNA (Guanine-N1-)-methyltransferase	Ribosomal RNA large subunit methyltransferase A	rRNA (guanine-N1-)-methyltransferase	rRNA (guanine-N1-)-methyltransferase	IPR000051: SAM (and some other nucleotide) binding motif 23S rRNA m1G745 methyltransferase	similar to Salmonella typhi CT18 rRNA guanine-N1-methyltransferase rRNA guanine-N1-methyltransferase	Putative uncharacterized protein gbs1821	similar to GB:D28496 SP:P36999 PID:460699 GB:U00096 PID:1736466; identified by sequence similarity; putative rRNA (guanine-N1-)-methyltransferase, putative	rRNA (Guanine-N1-)-methyltransferase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme 23S ribosomal RNA G745 methyltransferase	
ECOLI01777	UPF0059 membrane protein yebN	UPF0059 membrane protein MM_0643	UPF0059 membrane protein PD_1297	UPF0059 membrane protein MA_3749	UPF0059 membrane protein XCC4075	UPF0059 membrane protein MTH_1812	UPF0059 membrane protein BT_4561	UPF0059 membrane protein BL0390	UPF0059 membrane protein CPE0535	UPF0059 membrane protein NMB0215	UPF0059 membrane protein PA2910	UPF0059 membrane protein Cj0167c	UPF0059 membrane protein yebN	UPF0059 membrane protein DP0890	UPF0059 membrane protein Cgl1469/cg1660	UPF0059 membrane protein BF1183	UPF0059 membrane protein yebN	UPF0059 membrane protein DVU_2910	UPF0059 membrane protein ECA2389	UPF0059 membrane protein PSPTO_3755	UPF0059 membrane protein yebN	CDS_ID OB2993 hypothetical protein	similar to AE005405-1|AAG56810.1| percent identity: 37 in 196 aa putative membrane protein	UPF0059 membrane protein CA_C0950	Residues 21 to 180 of 180 are 100 pct identical to residues 47 to 206 of a 206 aa protein from Escherichia coli K12 ref: NP_416335.1 orf, conserved hypothetical protein	UPF0059 membrane protein YPO1754/y2555/YP_1638	UPF0059 membrane protein plu2701	UPF0059 membrane protein XF_2257	identified by similarity to OMNI:NTL03CP0535; match to protein family HMM PF02659 membrane protein, putative	
ECOLI01779	Cold shock-like protein cspC	MsmB	Cold shock-like protein cspC	Cold shock-like protein cspC	Cold shock protein	Cold-shock protein	Cold shock-like protein cspC	Cold shock-like protein cspC	Residues 1 to 69 of 69 are 98 pct identical to residues 1 to 69 of a 69 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288259.1 cold shock protein	Cold shock protein	Cold shock protein	Cold shock-like protein CspC	IPR002059: Cold-shock DNA-binding domain Cold shock-like protein cspC	similar to Salmonella typhi CT18 cold shock-like protein CspC cold shock-like protein CspC	Major cold shock protein	Cold shock protein	Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi cold shock-like protein CspC SWALL:CSPC_ECOLI (SWALL:P36996) (68 aa) fasta scores: E(): 2e-05, 36.76% id in 68 aa, and to Yersinia pestis cold shock protein YPO1746 SWALL:Q8ZFG3 (EMBL:AJ414150) (69 aa) fasta scores: E(): 1.2e-05, 36.23% id in 69 aa cold shock-like protein	Cold shock-like protein cspC	putative cold-shock protein	ortholog to Escherichia coli bnum: b1823; MultiFun: Cell processes 5.5.2; Information transfer 2.2.2; Regulation 3.1.2.2 cold shock-like protein	identified by similarity to SP:P72191; match to protein family HMM PF00313 cold shock domain family protein	identified by match to protein family HMM PF00313 temperature acclimation protein b , fragment-related protein	multicopy suppresses mukB mutants, putative regulator; Code: K; COG: COG1278 cold shock protein	Code: K; COG: COG1278 cold shock protein	cold shock protein	Code: K; COG: COG1278 cold shock protein	major cold shock protein	Cold shock-like protein CspC	Cold-shock DNA-binding domain protein	
ECOLI01779	Cold shock-like protein cspC	MsmB	Cold shock-like protein cspC	Cold shock-like protein cspC	Cold shock protein	Cold-shock protein	Cold shock-like protein cspC	Cold shock-like protein cspC	Residues 1 to 69 of 69 are 98 pct identical to residues 1 to 69 of a 69 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288259.1 cold shock protein	Cold shock protein	Cold shock protein	Cold shock-like protein CspC	IPR002059: Cold-shock DNA-binding domain Cold shock-like protein cspC	similar to Salmonella typhi CT18 cold shock-like protein CspC cold shock-like protein CspC	Major cold shock protein	Cold shock protein	Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi cold shock-like protein CspC SWALL:CSPC_ECOLI (SWALL:P36996) (68 aa) fasta scores: E(): 2e-05, 36.76% id in 68 aa, and to Yersinia pestis cold shock protein YPO1746 SWALL:Q8ZFG3 (EMBL:AJ414150) (69 aa) fasta scores: E(): 1.2e-05, 36.23% id in 69 aa cold shock-like protein	Cold shock-like protein cspC	putative cold-shock protein	ortholog to Escherichia coli bnum: b1823; MultiFun: Cell processes 5.5.2; Information transfer 2.2.2; Regulation 3.1.2.2 cold shock-like protein	identified by similarity to SP:P72191; match to protein family HMM PF00313 cold shock domain family protein	identified by match to protein family HMM PF00313 temperature acclimation protein b , fragment-related protein	multicopy suppresses mukB mutants, putative regulator; Code: K; COG: COG1278 cold shock protein	Code: K; COG: COG1278 cold shock protein	cold shock protein	Code: K; COG: COG1278 cold shock protein	major cold shock protein	Cold shock-like protein CspC	Cold-shock DNA-binding domain protein	
ECOLI01781	Uncharacterized protein yebO	Hypothetical protein yebO	Putative exported protein	Uncharacterized protein yebO	Residues 1 to 95 of 95 are 98 pct identical to residues 1 to 95 of a 95 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288261.1 orf, conserved hypothetical protein	Uncharacterized protein YPO1740/y2567/YP_1481	putative periplasmic or exported protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative exported protein	Uncharacterized protein yebO	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yebO	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yebO	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01783	Uncharacterized protein yobH	Uncharacterized protein yobH precursor	Uncharacterized protein yobH	Residues 1 to 79 of 79 are 97 pct identical to residues 1 to 79 of a 79 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288263.1 orf, conserved hypothetical protein	Putative membrane protein	putative outer membrane or exported	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative membrane protein	Uncharacterized protein yobH	orf conserved hypothetical protein	Uncharacterized protein yobH	Putative membrane protein precursor	Uncharacterized protein yobH	Membrane protein precursor	Putative membrane protein	Membrane protein precursor	Putative uncharacterized protein precursor	Putative outer membrane or exported	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01784	Transcriptional regulator kdgR	Transcriptional regulator KdgR	putative transcriptional regulator	Transcriptional regulator kdgR	Pectin degradation repressor	Putative regulator	Putative regulator	CDS_ID OB2820; IclR family transcriptional regulator	Probable transcriptional regulator KdgR, IclR family	Transcriptional regulator	Residues 1 to 263 of 263 are 98 pct identical to residues 1 to 263 of a 263 aa protein from Escherichia coli O157:H7 ref: NP_310564.1 putative regulator	IclR-family transcriptional regulatory protein	IPR005473: Bacterial transcription regulator, ICLR-like family putative transcriptional repressor (IclR family)	similar to Salmonella typhi CT18 transcriptional regulator KdgR transcriptional regulator KdgR	IclR-family transcriptional regulatory protein	Transcriptional regulator IclR protein	Putative IclR family transcriptional repressor	Code: K; COG: COG1414 putative regulator	Code: K; COG: COG1414 putative regulator	putative transcriptional regulator	Code: K; COG: COG1414 putative regulator	Transcriptional regulator KdgR	IclR-family transcriptional regulatory protein	Transcriptional regulator KdgR	transcription regulator (IclR family) BH2137 identified by match to protein family HMM PF01614	IclR-family transcriptional regulatory protein	transcriptional regulator, IclR family	IclR-family transcriptional regulatory protein	putative regulator Code: K; COG: COG1414	
ECOLI01785	Uncharacterized transporter yebQ	Putative transport protein	Residues 1 to 494 of 494 are 99 pct identical to residues 1 to 494 of a 494 aa protein from Escherichia coli K12 ref: NP_416342.1 putative transport protein	Putative transport protein	IPR001411: Tetracycline resistance protein TetB; IPR007114: Major facilitator superfamily putative transport protein	similar to Salmonella typhimurium putative transport protein putative transport protein	MFS Superfamily multidrug efflux transporter	Putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Hypothetical transport protein YebQ	Putative transport protein	Hypothetical transport protein YebQ	Transport protein	putative transport protein Code: GEPR; COG: COG0477	Transport protein	conserved hypothetical transport protein	Major facilitator superfamily MFS_1	Putative transport protein	Putative uncharacterized protein	Transporter, major facilitator family	Major facilitator superfamily MFS_1	Predicted transporter	Transporter, major facilitator family	Transporter, major facilitator family	Major facilitator superfamily MFS_1	Transporter, major facilitator family	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01786	Probable protease htpX	Probable protease htpX homolog 2	Probable protease htpX homolog	Probable protease htpX homolog 2	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Putative heat shock protein, protease	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX	Probable protease htpX homolog	Putative heat shock protein HtpX	Heat shock protein HtpX	Probable protease htpX	probable protease HtpX-like	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	Probable protease htpX homolog	
ECOLI01787	Tail-specific protease	Tail-specific protease	Tail-specific protease	Carboxyl-terminal protease	Prc	Periplasmic tail-specific protease	Periplasmic protease	Tail-specific protease	Probable periplasmic tail-specific proteinase	putative tail-specific protease	Tail-Specific Protease	Tail-specific protease	Tail-specific protease	Tail-specific protease	Carboxyl-terminal protease	Tail-specific protease	PMID: 10984043 PMID: 1729701 best DB hits: BLAST: pir:C83238; periplasmic tail-specific proteinase PA3257 [imported] -; E=5e-91 pir:F82634; tail-specific proteinase XF1823 [imported] - Xylella; E=5e-87 gb:AAK02353.1; (AE006061) Prc [Pasteurella multocida]; E=3e-75 COG: PA3257; COG0793 Periplasmic protease; E=4e-92 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=1.1e-09 PF02692; Interphotoreceptor retinoid-binding; E=0.78 periplasmic tail-specific proteinase	Tail-specific protease	Tail-specific protease	Carboxy-terminal protease for penicillin-binding protein 3	Putative carboxy-terminal (	Periplasmic protease	Residues 17 to 698 of 698 are 99 pct identical to residues 1 to 682 of a 682 aa protein from Escherichia coli K12 ref: NP_416344.1 carboxy-terminal protease for penicillin-binding protein 3	Tail-specific protease	Tail-specific protease	Tail-specific protease	Tail-specific protease protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark tail-specific protease	IPR001478: PDZ/DHR/GLGF domain carboxy-terminal protease for penicillin-binding protein 3	
ECOLI01788	ProP effector	Protein proQ homolog	ProP effector	putative activator of ProP osmoprotectant transporter	ProP effector	Protein proQ homolog	Protein proQ homolog	ProP effector	Protein proQ homolog	ProP effector	Protein proQ homolog	Residues 1 to 232 of 232 are 99 pct identical to residues 1 to 232 of a 232 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288268.1 Activator of ProP osmoprotectant transporter	ProP effector	ProP effector	activator of proP	ProP effector	ProP effector	Similar to: HI1670, PROQ_HAEIN predicted activator of osmoprotectant transporter ProP	Activator of osmoprotectant transporter ProP ProQ protein	Activator of osmoprotectant transporter	ProP effector	identified by similarity to SP:P45577; match to protein family HMM PF04352 ProP effector	Code: T; COG: COG3109 Activator of ProP osmoprotectant transporter	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type r : regulator putative post-translational activator of ProP expression	Code: T; COG: COG3109 activator of ProP osmoprotectant transporter	conserved hypothetical protein	Code: T; COG: COG3109 activator of ProP osmoprotectant transporter	ProP effector	ProQ activator of osmoprotectant transporter ProP	
ECOLI01789	UPF0067 protein yebR	Methionine-R-sulfoxide reductase, reduces the R enantiomer of free Met-SO, in contrast to Ycl033Cp which reduces Met-R-SO in a peptide linkage; has a role in protection against oxidative stress.  [Source:SGD;Acc:S000001552]	similar to sp|P36088 Saccharomyces cerevisiae YKL069w unknown function, start by similarity	highly similar to sp|P36088 Saccharomyces cerevisiae YKL069w singleton, start by similarity	Putative uncharacterized protein	Putative uncharacterized protein	highly similar to uniprot|P36088 Saccharomyces cerevisiae YKL069w;	DEHA2E19514p;similar to uniprot|P36088 Saccharomyces cerevisiae YKL069W Hypothetical ORF;	Putative uncharacterized protein TVG0853481	GAF domain-containing protein	Putative uncharacterized protein Ta0848	Hypothetical phosphodiesterase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	GAF domain-containing protein	Putative uncharacterized protein STY1978	Putative uncharacterized protein	Lmo1595 protein	GAF domain-containing protein involved in signal transduction	GAF domain-containing proteins	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Protein yebR	Putative uncharacterized protein	
ECOLI01790	Inner membrane protein yebS	Putative uncharacterized protein	Uncharacterized paraquat-inducible protein A	Putative membrane protein	hypothetical Uncharacterized paraquat-inducible protein A	Hypothetical protein yebS	PqiA family protein	Putative membrane protein	PqiA family protein	Inner membrane protein yebS	Uncharacterized paraquat-inducible protein A	Residues 1 to 427 of 427 are 99 pct identical to residues 1 to 427 of a 427 aa protein from Escherichia coli O157:H7 ref: NP_310570.1 orf, conserved hypothetical protein	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	paraquat-inducible protein A	Similar to: HI1671, YEBS_HAEIN paraquat-inducible protein A-like protein	Uncharacterized paraquat-inducible protein A PqiA protein	Putative inner membrane protein	conserved hypothetical protein	Code: S; COG: COG2995 conserved hypothetical protein	Code: S; COG: COG2995 conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Hypothetical protein	Membrane protein	Putative membrane protein	
ECOLI01791	Uncharacterized protein yebT	Putative uncharacterized protein	Putative uncharacterized protein	Paraquat-inducible protein B	Putative uncharacterized protein STY1980	Putative uncharacterized protein	hypothetical paraquat-inducible protein B	Hypothetical protein yebT	Putative uncharacterized protein	PqiB family protein	Putative uncharacterized protein	Putative uncharacterized protein VP1611	Putative uncharacterized protein	Paraquat-inducible protein B	Putative uncharacterized protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	paraquat-inducible protein B	Similar to: HI1672, YEBT_HAEIN paraquat-inducible protein B-like protein	Paraquat-inducible protein B PqiB protein	PqiB family protein	Putative inner membrane protein	identified by similarity to SP:P43671 PqiB family protein	conserved hypothetical protein	PqiB family protein	Code: R; COG: COG3008 conserved hypothetical protein	Code: R; COG: COG3008 conserved hypothetical protein	conserved hypothetical protein	
ECOLI01792	Ribosomal RNA small subunit methyltransferase F	tRNA and rRNA cytosine-C5-methylase	Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) (rRNA	Ribosomal RNA small subunit methyltransferase F	tRNA and rRNA cytosine-C5-methylase	putative sun/nucleolar protein family protein	Hypothetical protein yebU	NOL1/NOP2/sun family protein	Ribosomal RNA small subunit methyltransferase F	Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) (rRNA	Ribosomal RNA small subunit methyltransferase F	NOL1/NOP2/sun family protein	hypothetical conserved protein	Putative nucleolar protein	Ribosomal RNA small subunit methyltransferase F	Ribosomal RNA small subunit methyltransferase F	Ribosomal RNA small subunit methyltransferase F	Residues 1 to 406 of 406 are 97 pct identical to residues 18 to 423 of a 481 aa protein from Escherichia coli K12 ref: NP_416349.1 putative nucleolar proteins	Putative 23S rRNA m(5)C methyltransferase	rRNA methyltransferase, putative	IPR000051: SAM (and some other nucleotide) binding motif; IPR001601: Generic methyltransferase; IPR001678: Bacterial Sun/eukaryotic nucleolar Nop1/Nop2 paral putative rRNA methyltransferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein gbs1028	identified by match to PFAM protein family HMM PF01189 NOL1/NOP2/sun family protein	16S rRNA m(5)C 967 methyltransferase	best blastp match gb|AAK34101.1| (AE006564) putative nucleolar protein [Streptococcus pyogenes M1 GAS] putative nucleolar protein	putative 23S rRNA m(5)C methyltransferase	Similar to Porphyromonas gingivalis W83 NOL1/NOP2/sun family protein PG0432 SWALL:AAQ65632 (EMBL:AE017173) (468 aa) fasta scores: E(): 4.4e-58, 45.12% id in 472 aa, and to Lactobacillus plantarum rRNA methylase LP_1724 SWALL:Q88WC1 (EMBL:AL935257) (455 aa) fasta scores: E(): 2.5e-33, 31.84% id in 471 aa conserved hypothetical protein	rRNA methyltransferase, putative	
ECOLI01793	Uncharacterized protein yebV	Hypothetical protein yebV	Putative uncharacterized protein	Residues 1 to 83 of 83 are 100 pct identical to residues 1 to 83 of a 83 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288273.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein Yebv of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yebV	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yebV	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01794	Uncharacterized protein yebW	Hypothetical protein yebW	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 91 of 91 are 97 pct identical to residues 1 to 91 of a 91 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288274.1 orf, conserved hypothetical protein	hypothetical protein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative inner membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yebW	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yebW	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative secreted protein	Conserved domain protein	
ECOLI01795	Serine/threonine-protein phosphatase 1	Serine/threonine protein phosphatase 1	Putative serine/threonine phosphatase	Serine/threonine protein phosphatase 1	identified by match to protein family HMM PF00149 serine/threonine phosphatase, putative	Serine/threonine protein phosphatase 1	Serine/threonine protein phosphatase 1	Product confidence : putative Gene name confidence : putative putative serinethreonine protein phosphatase	Serine/threonine protein phosphatase 1	Protein phosphatase 1 modulates phosphoproteins, signals protein misfolding	Serine/threonine protein phosphatase	Lin0658 protein	Phosphoprotein phosphatase	IPR004843: Metallo-phosphoesterase; IPR006186: Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase serine/threonine protein phosphatase	similar to Salmonella typhi Ty2 serine/threonine protein phosphatase 1 serine/threonine protein phosphatase 1	Serine/threonine-protein phosphatase 1	Metallophosphoesterase	Protein phosphatase 1	signals protein misfolding; Code: T; COG: COG0639 protein phosphatase 1 modulates phosphoproteins	serine/threonine protein phosphatase identified by match to protein family HMM PF00149	metallophosphoesterase	putative serine/threonine protein phosphatase similarity:fasta; with=UniProt:PRP1_ECOLI (EMBL:ECD827); Escherichia coli.; pphA; Serine/threonine protein phosphatase 1 (EC 3.1.3.16).; length=218; id 30.332; 211 aa overlap; query 2-197; subject 17-213 similarity:fasta; with=UniProt:Q92V37_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative serinethreonine protein phosphatase (EC 3.1.3.16).; length=219; id 55.399; 213 aa overlap; query 2-213; subject 5-213	Serine/threonine protein phosphatase 1	Serine/threonine protein phosphatase 1	calcineurin-like phosphoesterase	Putative serine/threonine protein phosphatase	metallophosphoesterase PFAM: metallophosphoesterase KEGG: csa:Csal_1928 metallophosphoesterase	Serine/threonine protein phosphatase	Hypothetical protein	
ECOLI01796	Uncharacterized protein yebY	Hypothetical protein yebY	Putative exported protein	Putative uncharacterized protein	Residues 1 to 113 of 113 are 100 pct identical to residues 1 to 113 of a 113 aa protein from Escherichia coli K12 ref: NP_416353.1 orf, conserved hypothetical protein	Putative exported protein	Similar to unknown protein YebY of Escherichia coli	putative periplasmic or exported protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative exported protein	Putative periplasmic or exported protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yebY	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yebY	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	
ECOLI01797	Inner membrane protein yebZ	Hypothetical protein yebZ	Putative resistance protein	similar to Escherichia coli K12 putative resistance protein gi: 1788145 (291 aa). BLAST with identity of 98% in 290 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Putative copper resistance protein D	Similar to probable membrane protein YebZ of Escherichia coli	IPR000531: TonB-dependent receptor protein putative inner membrane protein	similar to Salmonella typhi CT18 putative cation transporter putative cation transporter	Putative copper resistance protein D	Putative inner membrane protein	identified by match to protein family HMM PF05425 probable copper resistance protein D YPO1785	Code: P; COG: COG1276 putative resistance protein	Copper resistance D	putative copper resistance protein	Copper resistance D	Code: P; COG: COG1276 putative resistance protein	copper resistance D	Putative uncharacterized protein	Putative copper resistance protein D precursor	copper resistance D	Putative uncharacterized protein yebZ	Copper resistance protein D precursor	Putative copper resistance protein D precursor	putative resistance protein Code: P; COG: COG1276	Copper resistance protein D precursor	Copper resistance protein D	conserved hypothetical protein	Copper resistance D domain protein	Copper resistance D domain protein	
ECOLI01798	Protein yobA	Protein yobA precursor	Putative copper resistance protein	Copper resistance protein, putative	Putative uncharacterized protein	Residues 1 to 124 of 124 are 100 pct identical to residues 1 to 124 of a 124 aa protein from Escherichia coli K12 ref: NP_416355.1 orf, conserved hypothetical protein	Putative copper resistance protein	Putative similar to copper export proteins	Similar to unknown protein YobA of Escherichia coli	Copper export proteins	putative homolog of Cu resistance protein CopC	similar to Salmonella typhi CT18 putative cation resistance protein putative cation resistance protein	Putative copper resistance protein	Putative copper resistance protein	Similar Cu resistance protein CopC	identified by match to protein family HMM PF04234 similar Cu resistance protein CopC	Code: R; COG: COG2372 conserved hypothetical protein	Code: R; COG: COG2372 conserved hypothetical protein	Copper resistance protein CopC	putative copper resistance protein	Copper resistance protein CopC	Code: R; COG: COG2372; orf conserved hypothetical protein	copper resistance protein CopC PFAM: copper resistance protein CopC: (7.8e-32) KEGG: dra:DRA0299 copper resistance protein, putative, ev=3e-27, 52% identity	copper resistance protein CopC	copper resistance protein CopC	Putative copper resistance protein CopC	Copper resistance protein CopC precursor	Putative copper resistance protein precursor	copper resistance protein CopC	
ECOLI01799	DNA polymerase III subunit theta	DNA polymerase III theta subunit	DNA polymerase III, theta subunit	DNA polymerase III subunit theta	Residues 30 to 105 of 105 are 100 pct identical to residues 1 to 76 of a 76 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288279.1 DNA polymerase III theta subunit	DNA polymerase III, theta subunit	HolE protein	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	similar to Salmonella typhi CT18 DNA polymerase III, theta subunit DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	DNA polymerase III theta subunit	DNA polymerase III theta subunit	DNA polymerase III theta subunit	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	DNA polymerase III theta subunit	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	Putative uncharacterized protein	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	DNA polymerase III, theta subunit	
ECOLI01800	Uncharacterized protein yobB	Putative uncharacterized protein STY2083	Hypothetical protein yobB	Putative uncharacterized protein	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1788148 (219 aa). BLAST with identity of 99% in 219 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	Putative predicted amidohydrolase protein	putative amidohydrolase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative amidohydrolase	identified by match to protein family HMM PF00795 hydrolase, carbon-nitrogen family	Code: R; COG: COG0388 conserved hypothetical protein	Code: R; COG: COG0388 conserved hypothetical protein	Code: R; COG: COG0388; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	putative carbon-nitrogen hydrolase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	conserved hypothetical protein Code: R; COG: COG0388	conserved hypothetical protein	Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase	Putative uncharacterized protein	Hydrolase, carbon-nitrogen family	Conserved protein	Hydrolase, carbon-nitrogen family	Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase	Hydrolase, carbon-nitrogen family	Putative uncharacterized protein	Putative uncharacterized protein	Hydrolase, carbon-nitrogen family	Putative uncharacterized protein	
ECOLI01802	Protease 2	Dipeptidyl aminopeptidase	Protease II	Protease II	Prolyl oligopeptidase family protein	Protease II	Probable oligopeptidase	Protease II	Oligopeptidase	Protease II	Protease II	Protease II	PtrB protein	Protease II	similar to GP:15073916, GB:J03589, GB:M35604, SP:P11441, PID:1203975, PID:340070, GB:J03589, GB:M35604, SP:P11441, PID:1203975, and PID:340070; identified by sequence similarity; putative protease II	Oligopeptidase B	Protease II	Protease II	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PROTEASE II OLIGOPEPTIDASE B HYDROLASE SERINE PROTEASE PROTEIN	Protease II	oligopeptidase	Putative protease	PROTEASE II	Putative protease	Putative prolyl oligopeptidase	Protease II	similar to AP003594-221|BAB75610.1| percent identity: 43 in 697 aa putative protease II	aminopeptidase	Protease II	
ECOLI01801	Exodeoxyribonuclease 10	identified by match to PFAM protein family HMM PF02943 DNA polymerase III, epsilon subunit, putative	DNA polymerase III, epsilon subunit, putative	Exodeoxyribonuclease X	DNA polymerase III	Exodeoxyribonuclease 10	DNA polymerase III, epsilon chain	Putative uncharacterized protein	Putative DNA polymerase III epsilon chain	Residues 19 to 238 of 238 are 98 pct identical to residues 1 to 220 of a 220 aa protein from Escherichia coli gb: AAF04847.1 exonuclease X	DNA Pol III Epsilon Chain	DNA exonuclease X, degrades ss and ds DNA with 3'-5' polarity	similar to Salmonella typhi CT18 exodeoxyribonuclease X exodeoxyribonuclease X	Similar to Chlamydia pneumoniae DNA polymerase III epsilon chain DnaQ_2 or cpn0655 or cp0092 SWALL:Q9Z7P9 (EMBL:AE001648) (249 aa) fasta scores: E(): 2.9e-86, 87.55% id in 249 aa, and to Bacillus subtilis DNA polymerase III PolC-type or DnaF or MutI SWALL:DPO3_BACSU (SWALL:P13267) (1437 aa) fasta scores: E(): 1.4e-10, 32.7% id in 159 aa putative DNA polymerase III epsilon chain	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative DNA exonuclease X	DNA exonuclease X	identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573 exonuclease	Code: L; COG: COG0847 conserved hypothetical protein	Code: L; COG: COG0847 conserved hypothetical protein	Code: L; COG: COG0847; orf conserved hypothetical protein	DNA polymerase III, epsilon subunit KEGG: dra:DR0856 DNA polymerase III, epsilon subunit, putative, ev=4e-63, 68% identity TIGRFAM: DNA polymerase III, epsilon subunit: (5e-07) PFAM: Exonuclease, RNase T and DNA polymerase III: (1.8e-39) SMART: Exonuclease: (7.9e-47)	DNA polymerase III epsilon chain EC 2.7.7.7	Exodeoxyribonuclease X	DNA-directed DNA polymerase	Exodeoxyribonuclease X	DNA polymerase III, epsilon chain	Putative exodeoxyribonuclease	conserved hypothetical protein Code: L; COG: COG0847	exodeoxyribonuclease X	
ECOLI01803	Inner membrane protein yebE	Putative uncharacterized protein VV2573	Putative uncharacterized protein	Putative uncharacterized protein STY2086	hypothetical protein	Hypothetical protein yebE	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein VP2334	Putative uncharacterized protein yebE	Putative uncharacterized protein	Residues 1 to 219 of 219 are 98 pct identical to residues 1 to 219 of a 219 aa protein from Escherichia coli O157:H7 ref: NP_310583.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative inner membrane protein	identified by match to protein family HMM PF04391 Protein of unknown function (DUF533) family	identified by similarity to GB:AAO55012.1; match to protein family HMM PF04391 conserved hypothetical protein	Protein of unknown function DUF533	Code: S; COG: COG2979 conserved hypothetical protein	Code: S; COG: COG2979 conserved hypothetical protein	conserved hypothetical protein	protein of unknown function DUF533	
ECOLI01804	Protein yebF	Protein yebF precursor	Protein yebF	Residues 1 to 122 of 122 are 98 pct identical to residues 1 to 122 of a 122 aa protein from Escherichia coli O157:H7 ref: NP_310584.1 orf, conserved hypothetical protein	Protein yebF	Protein yebF	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Protein yebF	Protein yebF	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical lipoprotein YebF	Hypothetical protein precursor	Putative uncharacterized protein yebF	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein precursor	Predicted protein	Protein yebF precursor	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	
ECOLI01805	Uncharacterized protein yebG	putative DNA damage-inducible gene in SOSregulon, dependent on cyclic AMP and H-NS	Hypothetical protein yebG	Putative uncharacterized protein	DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS	Uncharacterized protein yebG	Putative uncharacterized protein	DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS	Putative uncharacterized protein	hypothetical protein	Uncharacterized conserved protein	DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS	Code: S; COG: COG3141 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy putative DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS	Code: S; COG: COG3141 conserved hypothetical protein	Code: S; COG: COG3141; orf conserved hypothetical protein	Putative uncharacterized protein	YebG	YebG family protein	Hypothetical protein	YebG family protein	Hypothetical protein	Putative uncharacterized protein yebG	Hypothetical protein	DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS identified by match to protein family HMM PF07130	YebG family protein PFAM: YebG family protein KEGG: sdn:Sden_1719 YebG	Hypothetical protein	YebG family protein PFAM: YebG family protein KEGG: son:SO2604 hypothetical protein	YebG family protein PFAM: YebG family protein KEGG: shm:Shewmr7_1745 YebG family protein	
ECOLI01806	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	433aa long hypothetical phosphoribosylglycinamide formyl transferase	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	PurT phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	hypothetical phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	putative phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	Phosphoribosylglycinamide formyltransferase 2	
ECOLI01807	KHG/KDPG aldolase	Putative gluconate aldolase	Putative 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase	2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase	4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3- deoxyphosphogluconate aldolase	Probable aldolase	Putative KHG/KDPG aldolase	Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	pseudo	KHG/KDPG aldolase	KHG/KDPG aldolase	2-deydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase	Putative KHG/KDPG aldolase	Khg/KdpG aldolase [includes: 4-hydroxy-2- oxoglutarate aldolase and 2-dehydro-3-deoxyphosphogluconate aldolase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE KHG/KDPG ALDOLASE (INCLUDES: 4-HYDROXY-2-OXOGLUTARATE ALDOLASE, 2-DEHYDRO-3-DEOXYPHOSPHOGLUCONATE ALDOLASE) PROTEIN	4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3- deoxyphosphogluconate	4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase	KHG/KDPG aldolase	4-HYDROXY-2-OXOGLUTARATE ALDOLASE , 2-DEHYDRO-3- DEOXYPHOSPHOGLUCONATE ALDOLASE	KHG/KDPG aldolase	2-keto-3-deoxy-6-phosphogluconate aldolase	4-Hydroxy-2-oxoglutarate aldolase	SCC30.06, kdgA, KHG/KDPG aldolase, len: 219 aa; highly similar to SW:ALKH_ECOLI (EMBL:X68871) Escherichia coli KHG/KDPG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) (2-keto-4-hydroxyglutarate aldolase) (KHG-aldolase); 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) (phospho-2-dehydro-3-deoxygluconate aldolase) (phospho-2-keto-3-deoxygluconate aldolase) (2-keto-3-deoxy-6-phosphogluconate aldolase) (KDPG-aldolase)] KdgA, 213 aa; fasta scores: opt: 757 z-score: 811.9 E(): 0; 55.0% identity in 202 aa overlap.  Contains Pfam match to entry PF01081 Aldolase, KDPG and KHG aldolase and matches to Prosite entries PS00159 KDPG and KHG aldolases active site and PS00160 KDPG and KHG aldolases Schiff-base forming residue KHG/KDPG aldolase	2-keto-3-deoxy-6-phosphogluconate aldolase	Residues 1 to 213 of 213 are 100 pct identical to residues 1 to 213 of a 213 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288287.1 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase	KHG/KDPG aldolase	Probable bifunctional alkh protein (Khg/kdpg aldolase): 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro- 3-deoxyphosphogluconate aldolase	similar to 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase hypothetical protein	conserved gene multifunctional: 2-keto-3-deoxygluconate 6-phosphate aldolase/(4-hydroxy-2-oxoglutarate aldolase	
ECOLI01808	Phosphogluconate dehydratase	6-phosphogluconate dehydratase	Phosphogluconate dehydratase	Phosphogluconate dehydratase	Phosphogluconate dehydratase	Phosphogluconate dehydratase	Phosphogluconate dehydratase	6-phosphogluconate dehydratase	Phosphogluconate dehydratase	Phosphogluconate dehydratase	Phosphogluconate dehydratase	6-phosphogluconate dehydratase	Phosphogluconate dehydratase	predicted by Codon_usage predicted by Homology predicted by FrameD PHOSPHOGLUCONATE DEHYDRATASE PROTEIN	6-phosphogluconate dehydratase	Phosphogluconate dehydratase	6-phosphogluconate dehydratase	PHOSPHOGLUCONATE DEHYDRATASE	Phosphogluconate dehydratase	Phosphogluconate dehydratase	phosphogluconate dehydratase	Dihydroxyacid dehydratase	Phosphogluconate dehydratase	Residues 1 to 603 of 603 are 99 pct identical to residues 1 to 603 of a 603 aa protein from Escherichia coli O157:H7 ref: NP_310588.1 6-phosphogluconate dehydratase	Phosphogluconate dehydratase	similar to 6-phosphogluconate dehydratase hypothetical protein	conserved gene 6-phosphogluconate dehydratase	similar to 6-phosphogluconate dehydratase hypothetical protein	identified by match to protein family HMM PF00920; match to protein family HMM TIGR01196 phosphogluconate dehydratase	
ECOLI01809	Glucose-6-phosphate 1-dehydrogenase	glucose-6-phosphate 1-dehydrogenase;	similar to sp|P11412 Saccharomyces cerevisiae YNL241c ZWF1 glucose-6-phosphate dehydrogenase, hypothetical start	Glucose-6-phosphate 1-dehydrogenase [Source:GeneDB_Spombe;Acc:SPAC3A12.18]	gi|1346071|sp|P48828|G6PD_KLULA Kluyveromyces lactis Glucose-6-phosphate 1-dehydrogenase (G6PD), start by similarity	Glucose-6-phosphate 1-dehydrogenase	highly similar to uniprot|P11412 Saccharomyces cerevisiae YNL241c ZWF1 glucose-6-phosphate dehydrogenase;	DEHA2C10274p;similar to uniprot|P11412 Saccharomyces cerevisiae YNL241C ZWF1 Glucose-6-phosphate dehydrogenase;	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	identified by match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871 glucose-6-phosphate 1-dehydrogenase	similar to GB:X04409, GB:X56009, GB:M21139, GB:M21740, GB:M21140, GB:M21741, GB:M21141, GB:M21142, GB:X04408, GB:X07036, GB:M14631, GB:U12466, SP:P04895, PID:31913, PID:386745, PID:386746, and PID:527671; identified by sequence similarity; putative glucose-6-phosphate 1-dehydrogenase	go_component: cytoplasm [goid 0005737]; go_function: glucose-6-phosphate 1-dehydrogenase activity [goid 0004345]; go_process: pentose-phosphate shunt [goid 0006098] glucose-6-phosphate 1-dehydrogenase, putative	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase	
ECOLI01810	HTH-type transcriptional regulator hexR	HTH-type transcriptional regulator hexR	Transcriptional regulator	Putative hex-regulon repressor	putative transcriptional regulator	Hex regulon repressor	Putative uncharacterized protein VC1148	Transcriptional regulator, RpiR family	Hex regulon repressor	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Hex regulon repressor	Putative uncharacterized protein VP1236	Putative uncharacterized protein yebK	Putative uncharacterized protein	Transcriptional regulator	Residues 1 to 289 of 289 are 100 pct identical to residues 1 to 289 of a 289 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288290.1 orf, conserved hypothetical protein	Hex regulon repressor	Putative transcription regulation repressor hexr transcription regulator protein	Hex regulon repressor	Transcriptional regulator, RpiR family	putative transcriptional regulator	similar to Salmonella typhi Ty2 putative hex-regulon repressor putative hex-regulon repressor	Hex regulon repressor	Putative transcriptional regulator	transcriptional regulator, RpiR family	Transcriptional regulator HexR	Putative transcriptional regulator	identified by match to protein family HMM PF01380; match to protein family HMM PF01418 transcriptional regulator, RpiR family	identified by similarity to SP:P46118; match to protein family HMM PF01380; match to protein family HMM PF01418 transcriptional regulator HexR	
ECOLI01811	Pyruvate kinase II	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyk pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	putative pyruvate kinase II	Pyruvate kinase II	identified by match to protein family HMM PF00224; match to protein family HMM TIGR01064 pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	SC8F4.27c, pyk2, pyruvate kinase, len: 476 aa; strongly similar to many e.g. SW:Q46078 (KPYK_CORGL) pyruvate kinase from Corynebacterium glutamicum (Brevibacterium flavum) (475 aa) fasta scores; opt: 1693, z-score: 1907.7, E(): 0, 55.3% identity in 474 aa overlap and TRNEW:CAB52070 (EMBL:AL109732) pyruvate kinase from Streptomyces coelicolor (478 aa) fasta scores; opt: 2185, z-score: 2461.2, E(): 0, 69.3% identity in 473 aa overlap.  Contains Pfam match to entry PF00224 PK, Pyruvate kinase and Prosite match to PS00110 Pyruvate kinase active site signature. pyruvate kinase	Pyruvate kinase	Residues 48 to 527 of 527 are 99 pct identical to residues 1 to 480 of a 480 aa protein from Escherichia coli K12 ref: NP_416368.1 pyruvate kinase II, glucose stimulated	Pyruvate kinase	Pyruvate kinase	Pyruvate kinase	
ECOLI01812	Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	MsbB	Putative lipid A biosynthesis (Kdo)2-(Lauroyl)- lipid IVA acyltransferase	Lipid A acyltransferase	Putative lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase	Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase	Lipid A biosynthesis (Kdo)2-(Lauroyl)-lipid IVA acyltransferase	Lipid A biosynthesis acyltransferase, putative	Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid iva acyltransferase	Putative lipid A biosynthesis (Kdo)2-(Lauroyl)- lipid IVA acyltransferase	Suppressor of htrB, heat shock protein	Lipid A biosynthesis (Kdo)2-(Lauroyl)-lipid IVA acyltransferase	Residues 1 to 323 of 323 are 99 pct identical to residues 1 to 323 of a 323 aa protein from Escherichia coli K12 ref: NP_416369.1 suppressor of htrB, heat shock protein	Lipid A biosynthesis acyltransferase	Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVa acyltransferase	myristoyl transferase in lipid A biosynthesis, suppressor of htrB (lpxL)	similar to Salmonella typhi CT18 lipid A acyltransferase lipid A acyltransferase	Lipid A biosynthesis acyltransferase	lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase	Similar to: HI0199, MSBB_HAEIN lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis HtrB protein	Myristoyl transferase in lipid A biosynthesis	lipid A acyltransferase	Code: M; COG: COG1560 suppressor of htrB, heat shock protein	suppressor of htrB; heat shock protein; Code: M; COG: COG1560 MsbB	lipid A biosynthesis acyltransferase	heat shock protein; Code: M; COG: COG1560 suppressor of htrB	Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase	Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase	
ECOLI01813	Uncharacterized metalloprotease yebA	Peptidase, M23/M37 family	Putative uncharacterized protein	Putative uncharacterized protein	Membrane protein	Putative uncharacterized protein STY2098	Membrane protein related to metalloendopeptidases	Hypothetical metalloprotease yebA precursor	Peptidase, M23/M37 family	Putative peptidase	Uncharacterized metalloprotease BUsg_310	Putative uncharacterized protein VPA0517	Putative uncharacterized protein yebA	Membrane protein	Residues 1 to 440 of 440 are 99 pct identical to residues 1 to 440 of a 440 aa protein YEBA_ECOLI sp: P24204 orf, conserved hypothetical protein	Putative M23/M37 peptidase-family protein	YebA protein	Putative peptidase protein YebA	Probable Peptidase	Membrane protein related to metalloendopeptidases	putative Peptidase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative M23/M37 peptidase-family protein	Hypothetical protein	conserved family - putative M23/M37 peptidase domain protein hypothetical protein	cell wall endopeptidase, family M23/M37	Similar to: HI0409, Y409_HAEIN conserved hypothetical metalloprotease	Membrane proteins related to metalloendopeptidases NlpD protein	
ECOLI01814	High-affinity zinc uptake system protein znuA	ABC transporter, periplasmic binding protein	High-affinity zinc uptake system protein znuA	FimA	Probable adhesin	Putative periplasmic solute binding protein for ABC transport system	Uncharacterized periplasmic metal-binding protein TM_0123	Zinc ABC transporter, periplasmic zinc-binding protein	High-affinity zinc uptake system periplasmic binding protein	Related to Mn/Zn ABC transporter, periplasmic solute binding protein	Lmo1671 protein	Cation ABC transporter, periplasmic cation- binding protein, putative	High-affinity zinc uptake system protein znuA	Cation ABC transporter, periplasmc-binding protein	Zinc ABC transporter, periplasmic zinc-binding protein	High-affinity zinc uptake system protein	High-affinity zinc uptake system protein znuA	Zinc ABC transporter, periplasmic zinc-binding protein	Zinc ABC transporter, periplasmic zinc-binding protein	Putative adhesin	Putative zinc ABC transporter membrane protein	BH0259 protein	ABC-type Zn2+ transport system, periplasmic component	Lin1779 protein	Residues 25 to 352 of 352 are 99 pct identical to residues 1 to 328 of a 328 aa protein from Escherichia coli K12 ref: NP_416371.1 putative adhesin	Uncharacterized periplasmic metal-binding protein CT_415	High-affinity zinc uptake system protein znuA	High affinity zinc uptake system protein ZnuA	identified by match to protein family HMM PF01297 ABC transporter, substrate-binding protein	
ECOLI01815	Zinc import ATP-binding protein znuC	Zinc import ATP-binding protein znuC	Zinc import ATP-binding protein znuC	Zinc import ATP-binding protein znuC	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDING ABC TRANSPORTER PROTEIN	Zinc import ATP-binding protein znuC	Zinc import ATP-binding protein znuC	Residues 1 to 251 of 251 are 99 pct identical to residues 1 to 251 of a 251 aa protein from Escherichia coli O157:H7 ref: NP_310595.1 putative ATP-binding component of a transport system	Zinc import ATP-binding protein znuC	Zinc import ATP-binding protein znuC	Putative uncharacterized protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp_bind) high affinity Zn transport protein	similar to Salmonella typhi CT18 high-affinity zinc uptake system ATP-binding protein high-affinity zinc uptake system ATP-binding protein	Zinc import ATP-binding protein znuC	high-affinity zinc uptake system ATP-binding protein ZnuC	ABC-type Mn/Zn transport systems, ATPase component ZnuC protein	Zinc import ATP-binding protein znuC	Code: P; COG: COG1121 putative ATP-binding component of a transport system	Code: P; COG: COG1121 putative ATP-binding component of a transport system	zinc ABC transporter ATP-binding protein	Code: P; COG: COG1121 putative ATP-binding component of a transport system	putative high-affinity zinc uptake system ATP-binding component of ABC transporter protein Similar, but extended at the C-terminus with a histidine rich region, to Escherichia coli O157:H7 znuc high-affinity zinc uptake system atp-binding protein znuc.  UniProt:ZNUC_ECOLI (EMBL:AE016761) (251 aa), and similar to entire protein of Agrobacterium tumefaciens (strain C58/ATCC 33970) znuc abc transporter, nucleotide binding/atpase protein (agr_c_2804p). UniProt:Q8UF79_AGRT5 (EMBL:AE008075) (299 aa) similarity:fasta; with=UniProt:ZNUC_ECOLI (EMBL:AE016761); Escherichia coli O157:H7.; znuC; High-affinity zinc uptake system ATP-binding protein znuC.; length=251; id 51.046; 239 aa overlap; query 16-254; subject 4-242 similarity:fasta; with=UniProt:Q8UF79_AGRT5 (EMBL:AE008075); Agrobacterium tumefaciens (strain C58/ATCC 33970).; znuC; ABC transporter, nucleotide binding/ATPase protein (AGR_C_2804p).; length=299; id 80.690; 290 aa overlap; query 14-302; subject 10-298	Zinc import ATP-binding protein znuC	High-affinity zinc uptake system ATP-binding protein precursor	Zinc import ATP-binding protein znuC	High-affinity zinc uptake system ATP-binding protein precursor	Zinc import ATP-binding protein znuC	High affinity Zn transport protein	putative ATP-binding component of a transport system Code: P; COG: COG1121	
ECOLI01816	High-affinity zinc uptake system membrane protein znuB	High-affinity zinc uptake system membrane protein znuB	ABC transporter component, possibly Zn transport	Putative uncharacterized protein	Permease of ABC zinc transporter ZnuB	Zinc ABC transporter, permease protein	ABC transporter, membrane spanning protein	High-affinity zinc uptake system membrane protein	ABC transporter permease protein	Putative cation ABC transporter, permease protein	putative ABC-type Mn2+/Zn2+ transport system, permease component	High-affinity zinc uptake system membrane protein znuB	similar to GP:15074847, and GP:17739944; identified by sequence similarity; putative zinc ABC transporter, permease protein	Zinc ABC transporter, permease protein	ABC 3 transport family protein	High-affinity zinc uptake system membrane protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE HIGH-AFFINITY ZINC UPTAKE SYSTEM MEMBRANE ABC TRANSPORTER PROTEIN	High-affinity zinc uptake system membrane protein znuB	Zinc ABC transporter, permease protein	HIGH-AFFINITY ZINC UPTAKE SYSTEM MEMBRANE PROTEIN ZNUB	Zinc ABC transporter, permease protein	Putative uncharacterized protein yebI	High-affinity zinc uptake system membrane protein znuB	ABC-type Mn2+/Zn2+ transport system, permease component	Residues 4 to 253 of 253 are 99 pct identical to residues 12 to 261 of a 261 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288296.1 orf, conserved hypothetical protein	High-affinity zinc uptake system membrane protein	YebI protein	High-affinity zinc uptake system membrane protein ZnuB	Zinc uptake ABC transporter	
ECOLI01817	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	similar to GB:Z31695,  and PID:469144; identified by sequence similarity; putative Holliday junction DNA helicase RuvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	Holliday junction ATP-dependent DNA helicase ruvB	
ECOLI01818	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	identified by match to TIGR protein family HMM TIGR01740 Holliday junction DNA helicase RuvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	Holliday junction ATP-dependent DNA helicase ruvA	
ECOLI01819	Uncharacterized protein yebB	Hypothetical protein yebB	Putative uncharacterized protein yebB	Residues 5 to 223 of 223 are 98 pct identical to residues 15 to 233 of a 233 aa protein from Escherichia coli K12 ref: NP_416376.1 orf, conserved hypothetical protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative periplasmic protein	conserved hypothetical protein	protein of unknown function DUF1105	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	protein of unknown function DUF1105	Putative uncharacterized protein yebB	protein of unknown function DUF1105 PFAM: protein of unknown function DUF1105 KEGG: bur:Bcep18194_B2897 protein of unknown function DUF1105	protein of unknown function DUF1105 PFAM: protein of unknown function DUF1105 KEGG: bcn:Bcen_4808 protein of unknown function DUF1105	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein Similar to Escherichia coli O6 hypothetical protein YebB UniProt:Q8FGR2_ECOL6 (EMBL:AE016761) (224 aa) fasta scores: E()=3.7e-29, 43.548% id in 186 aa; homology does not extend to the N terminus.	Putative uncharacterized protein	Putative periplasmic protein	Putative periplasmic protein	Putative periplasmic protein	Putative uncharacterized protein yebB	
ECOLI01820	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	identified by match to TIGR protein family HMM TIGR00228 Holliday junction resolvase	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Holliday junction resolvasome endonuclease subunit	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	Crossover junction endodeoxyribonuclease ruvC	
ECOLI01821	UPF0082 protein yebC	conserved hypothetical protein;	Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies.  [Source:SGD;Acc:S000003253]	similar to sp|P53212 Saccharomyces cerevisiae YGR021w, hypothetical start	UPF0082 protein blr1534	similar to sp|P53212 Saccharomyces cerevisiae YGR021w singleton, start by similarity	UPF0082 protein FN1661	UPF0082 protein GSU1074	UPF0082 protein PD_0885	UPF0082 protein slr0989	UPF0082 protein XCC3027	UPF0082 protein HI0315	similar to uniprot|P53212 Saccharomyces cerevisiae YGR021w;	identified by match to PFAM protein family HMM PF01709 hypothetical protein	UPF0082 protein CT1665	UPF0082 protein SAV_6832	UPF0082 protein BL0726	UPF0082 protein aq_1575	UPF0082 protein SYNW0543	UPF0082 protein CPE1954	UPF0082 protein EF_0663	UPF0082 protein CC_3243	UPF0082 protein RC0681	UPF0082 protein NMB1648	UPF0082 protein PM0980	UPF0082 protein PA0964	UPF0082 protein TM_0466	UPF0082 protein DR_2548	UPF0082 protein LA_0720	
ECOLI01822	Dihydroneopterin triphosphate pyrophosphatase	DATP pyrophosphohydrolase	NtpA	DATP pyrophosphohydrolase	Putative dATP pyrophosphohydrolase	DATP pyrophosphohydrolase	DATP pyrophosphohydrolase	DATP pyrophosphohydrolase	Dihydroneopterin triphosphate pyrophosphatase	Residues 20 to 169 of 169 are 99 pct identical to residues 1 to 150 of a 150 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288302.1 dATP pyrophosphohydrolase	Putative dATP pyrophosphohydrolase	NUDIX hydrolase	Probable datp pyrophosphohydrolase protein	DATP pyrophosphohydrolase	ATP diphosphatase	IPR000086: NUDIX hydrolase; IPR003564: DATP pyrophosphohydrolase dATP pyrophosphohydrolase	similar to Salmonella typhi CT18 DATP pyrophosphohydrolase DATP pyrophosphohydrolase	Putative dATP pyrophosphohydrolase	Putative nucleoside triphosphate pyrophosphohydrolase	Similar to: HI0316, NUDB_HAEIN dATP pyrophosphohydrolase	NTP pyrophosphohydrolases including oxidative damage repair enzymes MutT protein	dATP pyrophosphohydrolase	ATP diphosphatase	probable dATP pyrophosphohydrolase	NUDIX hydrolase	NUDIX hydrolase	Best Blastp Hit: gb|AAF41065.1| (AE002419) dATP pyrophosphohydrolase [Neisseria meningitidis MC58] COG0494 NTP pyrophosphohydrolases (MutT family) putative pyrophosphohydrolase	Code: LR; COG: COG0494 dATP pyrophosphohydrolase	Code: LR; COG: COG0494 dATP pyrophosphohydrolase	
ECOLI01823	Aspartyl-tRNA synthetase	Mitochondrial aspartyl-tRNA synthetase, required for acylation of aspartyl-tRNA; yeast and bacterial aspartyl-, asparaginyl-, and lysyl-tRNA synthetases contain regions with high sequence similarity, suggesting a common ancestral gene. [Source:SGD;Acc:S000006025]	similar to sp|P15179 Saccharomyces cerevisiae YPL104w MSD1 aspartyl-tRNA synthetase, start by similarity	Aspartyl-tRNA synthetase, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC736.06]	similar to sp|P15179 Saccharomyces cerevisiae YPL104w MSD1 aspartate--tRNA ligase, mitochondrial, start by similarity	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	similar to uniprot|P15179 Saccharomyces cerevisiae YPL104w MSD1;	Aspartyl-tRNA synthetase	DEHA2D16346p;similar to uniprot|P15179 Saccharomyces cerevisiae YPL104W MSD1 Mitochondrial aspartyl-tRNA synthetase required for acylation of aspartyl-tRNA;	Aspartyl-tRNA synthetase	similar to SP:P13429, GB:X16664, PID:42956, PID:967127,  and PID:264034; identified by sequence similarity; putative aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase	
ECOLI01824	Isochorismatase family protein yecD	Vng1100c	Putative isochorismatase	N-carbamoylsarcosine amidase related protein	Amidase related to nicotinamidase	Putative hydrolase	Putative isochorismatase family protein	Hypothetical isochorismatase family protein yecD	Putative hydrolase	Isochorismatase family protein	Putative isochorismatase-related protein	Uncharacterized isochorismatase family protein yecD	Uncharacterized isochorismatase family protein CA_P0030	SCF81.07, possible hydrolase, len: 193 aa; similar to TR:P94573 (EMBL:Z82987) Bacillus subtilis hypothetical 21.1KD protein, 189 aa; fasta scores: opt: 504 z-score: 582.8 E(): 4.4e-25; 48.4% identity in 190 aa overlap and to SW:ENTB_ECOLI (EMBL:M24148) Escherichia coli isochorismatase (EC 3.3.2.1) (2,3 dihydro-2,3 dihydroxybenzoate synthase) EntB, 285 aa; fasta scores: opt: 205 z-score: 242.1 E(): 4.1e-06; 26.8% identity in 183 aa overlap. Contains match to Pfam entry PF00857 Isochorismatase, Isochorismatase family putative hydrolase	Putative uncharacterized protein	isochorismatase	Putative uncharacterized protein yjgF	putative isochorismatase	similar to Salmonella typhi CT18 putative hydrolase putative hydrolase	hypothetical protein, similar to isochorismatase	Ortholog of S. aureus MRSA252 (BX571856) SAR0188 putative isochorismatase	hypothetical protein, similar to isochorismatase	COG1335 Isochorismatase	Similar to Q9HZE2 Hypothetical protein PA3066 from Pseudomonas aeruginosa (190 aa). FASTA: opt: 359 Z-score: 477.3 E(): 1.1e-18 Smith-Waterman score: 359; 35.638 identity in 188 aa overlap. ORF ftt1117c isochorismatase hydrolase family protein	Putative isochorismatase	Putative isochorismatase	identified by match to protein family HMM PF00857 isochorismatase family protein	identified by match to protein family HMM PF00857 hydrolase, isochorismatase family	Isochorismatase hydrolase	
ECOLI01825	Uncharacterized protein yecE	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV2289	Putative uncharacterized protein STY2111	Alr0901 protein	Conserved hypothetical protein	Hypothetical protein yecE	Putative uncharacterized protein	PMID: 20437337 best DB hits: BLAST: pir:D83184; conserved hypothetical protein PA3683 [imported] -; E=4e-42 pir:E82234; conserved hypothetical protein VC1165 [imported] -; E=9e-42 swissprot:P37348; YECE_ECOLI HYPOTHETICAL 31.5 KD PROTEIN IN; E=1e-39 COG: PA3683; COG1801 Uncharacterized ACR; E=4e-43 PFAM: PF01904; Protein of unknown function D; E=1.6e-11 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1046	UPF0759 protein yecE	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	conserved hypothetical protein	IPR002763: Protein of unknown function DUF72 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	identified by similarity to GB:AAN67130.1; match to protein family HMM PF01904 conserved hypothetical protein	identified by similarity to GB:AAN67130.1; match to protein family HMM PF01904 conserved hypothetical protein	Protein of unknown function DUF72	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	
ECOLI01826	Inner membrane protein yecN	Putative membrane protein	Inner membrane protein yecN	Glutathione S-transfersae-related protein	Putative uncharacterized protein	Putative membrane protein	Glutathione S-transferase-related protein	Putative uncharacterized protein yecN	Residues 1 to 141 of 141 are 98 pct identical to residues 1 to 141 of a 141 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288306.1 orf, conserved hypothetical protein	Putative membrane protein	Similar probable membrane protein YecN of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Glutathione S-transferase related protein, MAPEG superfamily	Putative inner membrane protein	Code: R; COG: COG3788 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative membrane protein	Code: R; COG: COG3788 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG3788; orf conserved hypothetical protein	Putative uncharacterized protein	Uncharacterized relative of glutathione S- transferase MAPEG superfamily-like protein	Hypothetical protein	Hypothetical protein	Membrane-associated proteins in eicosanoid and glutathione metabolism	Putative membrane protein	Hypothetical protein precursor	Hypothetical protein	
ECOLI01827	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	Putative uncharacterized protein VV2290	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	Conserved hypothetical protein	Protein yecO	tRNA (cmo5U34)-methyltransferase	Methyltransferase, putative	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	Residues 1 to 247 of 247 are 100 pct identical to residues 1 to 247 of a 247 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288307.1 orf, conserved hypothetical protein	tRNA (cmo5U34)-methyltransferase	tRNA (cmo5U34)-methyltransferase	methyltransferase domain protein	identified by match to protein family HMM TIGR00740 methyltransferase, putative	IPR000051: SAM (and some other nucleotide) binding motif; IPR001601: Generic methyltransferase putative SAM-dependent methyltransferases	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	tRNA (cmo5U34)-methyltransferase	Putative	tRNA (cmo5U34)-methyltransferase 2	tRNA (cmo5U34)-methyltransferase	
ECOLI01828	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	Putative uncharacterized protein VV2291	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	Conserved hypothetical protein	Hypothetical protein yecP	tRNA (mo5U34)-methyltransferase	Methyltransferase, putative	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	Residues 1 to 323 of 323 are 98 pct identical to residues 1 to 323 of a 323 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288308.1 putative enzyme	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	methyltransferase, putative	putative enzyme	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	tRNA (mo5U34)-methyltransferase	Putative	tRNA (mo5U34)-methyltransferase	tRNA (mo5U34)-methyltransferase	methyltransferase	
ECOLI01829	Trimethylamine-N-oxide reductase 2	Trimethylamine-N-oxide reductase 2 precursor	Biotin sulfoxide reductase	Biotin sulfoxide reductase	Trimethylamine-N-oxide reductase 2	Residues 1 to 815 of 815 are 98 pct identical to residues 1 to 815 of a 815 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288309.1 biotin sulfoxide reductase 2	Biotin sulfoxide reductase BisC	biotin sulfoxide reductase trimethylamine-N-oxide reductase	Anaerobic dehydrogenases, typically selenocysteine-containing BisC protein	TMAO reductase 2 trimethylamine-N-oxide reductase 2	Code: C; COG: COG0243 biotin sulfoxide reductase 2	Code: C; COG: COG0243 biotin sulfoxide reductase 2	Trimethylamine-N-oxide reductase (cytochrome c)	pseudo	Trimethylamine-N-oxide reductase 2	Trimethylamine-N-oxide reductase 2, biotin sulfoxide reductase	Formate dehydrogenase	molybdopterin guanine dinucleotide-containing S/N-oxide reductase family protein identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR00509; match to protein family HMM TIGR01409	Putative molybdopterin-containing oxidoreductase precursor	Trimethylamine-N-oxide reductase	biotin sulfoxide reductase identified by match to protein family HMM PF00384; match to protein family HMM PF01568	trimethylamine-N-oxide reductase 2 precursor	Molybdopterin oxidoreductase precursor	Trimethylamine-N-oxide reductase	Putative uncharacterized protein	Putative uncharacterized protein	Biotin sulfoxide reductase	Trimethylamine N-oxide reductase III, subunit TorZ	Molybdopterin guanine dinucleotide-containing S/N -oxide reductase precursor	
ECOLI01830	Cytochrome c-type protein torY	Cytochrome c-type protein torY	Cytochrome c-type protein YecK	Cytochrome c-type protein YecK	Cytochrome c-type protein torY	Residues 1 to 343 of 343 are 98 pct identical to residues 24 to 366 of a 366 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288310.1 putative cytochrome C-type protein	cytochrome c-type protein TorC	Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit TorC protein	cytochrome c-type protein TorY	Code: C; COG: COG3005 putative cytochrome C-type protein	pfam03264, Cytochrome_NNT, NapC/NirT cytochrome c family, N-terminal region. COG3005, TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit.  Electron donor to catalytic subunit, DorA, RSP_3048. Hybrid low-potential tetraheme cytochrome c domain homologous to NapC and monoheme class I cytochrome c domain at the C-terminus Citation: J. Bacteriol. 179 (24), 7617-7624 (1997)-Rhodobacter spaheroides J Biol Chem. 274(15):9911-4 (1999)-purified from R.capsulatus DMSO/TMAO pentaheme cytochrome c subunit	Cytochrome c-type protein TorY	Cytochrome c-type protein TorY	Cytochrome c-type protein	cytochrome c-type protein TorC identified by match to protein family HMM PF03264	Cytochrome C-type protein precursor	DMSO/TMAO pentaheme cytochrome c subunit	putative cytochrome C-type protein Code: C; COG: COG3005	TMAO reductase III (TorYZ), cytochrome c-type subunit	Cytochrome C-like protein	Cytochrome C-like protein	Cytochrome c-type protein TorY	Trimethylamine N-oxide reductase III, c-type cytochrome subunit TorY	NapC/NirT cytochrome c domain protein precursor	TMAO reductase III (TorYZ), cytochrome c-type subunit	Trimethylamine N-oxide reductase III, c-type cytochrome subunit TorY	NapC/NirT cytochrome c domain protein precursor	Trimethylamine N-oxide reductase III, c-type cytochrome subunit TorY	Cytochrome c-type protein TorY	
ECOLI01831	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Probable copper homeostasis protein	Copper homeostasis protein, putative	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Putative copper homeostasis protein CutC	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Copper homeostasis protein	CutC family protein	hypothetical copper homeostasis protein	Copper homeostasis protein cutC	Copper homeostasis protein CutC	identified by match to protein family HMM PF03932 copper homeostasis protein CutC, putative	Copper homeostasis protein cutC	Copper homeostasis protein cutC	Copper homeostasis protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Copper homeostasis protein cutC	Putative copper homeostasis protein	CutC family protein	Copper homeostasis protein cutC	
ECOLI01832	Protein yecM	Putative uncharacterized protein VV1045	Putative uncharacterized protein STY2116	conserved hypothetical protein	Protein yecM	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP0863	Putative uncharacterized protein yecM	Uncharacterized protein conserved in bacteria	Residues 1 to 190 of 190 are 96 pct identical to residues 1 to 190 of a 190 aa protein from Escherichia coli K12 ref: NP_416389.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YecM of Escherichia coli	IPR002097: Profilin/allergen putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	protein YecM	Similar to: HI1582, YECM_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	Code: S; COG: COG3102 conserved hypothetical protein	Code: S; COG: COG3102 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3102; orf conserved hypothetical protein	Putative cytoplasmic protein YecM	Hypothetical protein	Hypothetical protein	
ECOLI01833	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	similar to GB:Z17227, SP:Q08334, PID:393379,  and PID:571296; identified by sequence similarity; putative arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase 2	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase 1	putative arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	Arginyl-tRNA synthetase	identified by match to protein family HMM PF00750; match to protein family HMM PF05746; match to protein family HMM TIGR00456 arginyl-tRNA synthetase	
ECOLI01834	Uncharacterized protein yecT	Residues 1 to 162 of 162 are 97 pct identical to residues 8 to 169 of a 169 aa protein from Escherichia coli K12 ref: NP_416391.1 orf, conserved hypothetical protein	Code: S; COG: COG3755 conserved hypothetical protein	conserved hypothetical protein Code: S; COG: COG3755	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yecT	Putative uncharacterized protein yecT	YecT protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI01835	Flagellar protein flhE	Flagellar protein flhE	Flagellar protein	Flagellar protein	Residues 2 to 113 of 113 are 98 pct identical to residues 1 to 112 of a 130 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288315.1 flagellar protein	Flagellar protein FlhE	flagellar protein	similar to Salmonella typhi CT18 flagellar protein FlhE precursor flagellar protein FlhE precursor	Flagella apparatus protein FlhE	Flagellar protein flhE	flagellar protein FlhE precursor	flagellar protein	flagellar protein	Flagellar protein FlhE	Flagellar protein FlhE precursor	flagellar FlhE	Flagellar protein FlhE	Flagellar protein FlhE precursor	Flagellar protein FlhE precursor	flagellar protein	flagellar biosynthesis protein	Flagellar protein FlhE precursor	flagellar protein FlhE precursor	Flagellar FlhE family protein precursor	Putative uncharacterized protein	Flagellar protein FlhE	Flagellar FlhE family protein precursor	Conserved protein	Flagellar protein FlhE	
ECOLI01836	Flagellar biosynthesis protein flhA	Flagellar biosynthetic protein FlhA	Flagellar biosynthetic protein FlhA	Flagellar biosynthesis protein flhA	Flagellar biosynthesis protein flhA	Flagellar biosynthesis protein FlhA	Flagellar biosynthesis protein	Flagellar biosynthesis protein FlhA	Flagellar biosynthesis pathway, component FlhA	Flagellar biosynthesis protein FlhA	Flagellar biosynthesis protein FlhA	Probable flagellar biosynthesis protein	Lmo0680 protein	Flagellar biosynthesis protein FlhA	polar flagellar assembly protein FlhA	Flagellar biosynthesis protein flhA	Flagella-associated protein	Flagellar biosynthesis protein flhA	Flagellar biosynthetic protein FlhA	Flagellar biosynthetic protein FlhA	pseudo	Flagellar biosynthesis protein FlhA	Flagellar biosynthesis protein FlhA	Flagellar biosynthesis protein flhA	Flagellar biosynthesis protein	Flagellar biosynthesis protein	PMID: 8097015 best DB hits: BLAST: ddbj:BAB06157.1; (AP001515) flagella-associated protein [Bacillus; E=1e-119 pir:C72319; flagellar biosynthesis protein FlhA - Thermotoga; E=1e-115 swissprot:P35620; FLHA_BACSU FLAGELLAR BIOSYNTHESIS PROTEIN FLHA; E=1e-114 COG: BH2438; COG1298 Flagellar biosynthesis/type III secretory pathway; E=1e-120 PFAM: PF00771; FHIPEP family; E=1.6e-261 flagella-associated protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE FLAGELLAR BIOSYNTHESIS TRANSMEMBRANE PROTEIN	Flagellar biosynthesis protein flhA	
ECOLI01837	Flagellar biosynthetic protein flhB	Flagellar biosynthetic protein FlhB	Flagellar protein	Flagellar biosynthetic protein flhB	Flagellar biosynthetic protein FlhB	Flagellar biosynthesis protein FlhB	Flagellar biosynthesis pathway, component FlhB	Flagellar biosynthetic protein FlhB	Putative flagellar biosynthetic protein FlhB	Flagellar biosynthetic protein flhB	Flagellar biosynthetic protein	Flagellar biosynthetic protein FlhB	putative flagellar biosynthetic protein FlhB	Flagellar biosynthetic protein flhB	Flagella-associated protein	Flagellar biosynthetic protein flhB	Flagellar biosynthetic protein FlhB	Flagellar biosynthetic protein FlhB	Flagellar biosynthetic protein FlhB	Flagellar biosynthetic protein FlhB	Flagellar biosynthetic protein	Flagellar biosynthesis protein	PMID: 8299954 best DB hits: BLAST: pir:I40395; flagellar biosynthetic protein FlhB - Bacillus subtilis; E=7e-51 swissprot:P35538; FLHB_BACSU FLAGELLAR BIOSYNTHETIC PROTEIN FLHB; E=7e-51 pir:D72319; flagellar biosynthetic protein flhB TM0909 - Thermotoga; E=6e-46 COG: BS_flhB; COG1377 Flagellar biosynthesis/type III secretory pathway; E=6e-52 TM1672; COG2257 Uncharacterized BCR homologous to the cytoplasmic; E=9e-10 PFAM: PF01312; FlhB HrpN YscU SpaS Family; E=1.4e-91 flagellar biosynthetic protein FlhB	Flagellar biosynthetic protein FlhB	FLAGELLAR BIOSYNTHETIC PROTEIN FLHB	flagellar biosynthetic protein	Flagellar biosynthetic protein FlhB	Polar flagellar assembly protein FlhB	Putative part of export apparatus for flagellar proteins	
ECOLI01838	Chemotaxis protein cheZ	Chemotaxis protein cheZ	Chemotaxis protein CheZ	Chemotaxis protein CheZ	Chemotaxis protein CheZ	putative chemotaxis protein CheZ	Chemotaxis protein cheZ	Chemotaxis protein CheZ	Chemotaxis protein CheZ	Chemotaxis protein CheZ	Chemotaxis protein CheZ	Chemotaxis protein	Chemotaxis protein CheZ	Chemotaxis protein CheZ	Chemotaxis protein CheZ	Chemotaxis protein CheZ	Chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator	Chemotaxis protein	Residues 11 to 224 of 224 are 99 pct identical to residues 1 to 214 of a 214 aa protein from Escherichia coli K12 ref: NP_416395.1 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator	Chemotaxis protein CheZ	Putative chemotaxis protein CheZ	Chemotaxis protein CheZ	Chemotaxis protein CheZ	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark chemotaxis related protein	chemotactic response; CheY protein phophatase	similar to Salmonella typhi CT18 chemotaxis protein CheZ chemotaxis protein CheZ	Chemotaxis related protein	Chemotaxis protein CheZ	chemotaxis protein CheZ	
ECOLI01839	Chemotaxis protein cheY	Chemotaxis protein	Putative two-component system response regulator	Chemotaxis protein CheYII	Chemotaxis protein cheY	Chemotaxis protein cheY homolog	Chemotaxis protein CheY	Response regulator	Chemotaxis protein cheY	Chemotaxis protein CheY	putative chemotaxis protein CheY	Chemotaxis protein CheY	Chemotaxis protein cheY	Chemotaxis protein CheY	CheY homolog	Chemotaxis protein CheY	Chemotaxis protein CheY	Chemotaxis protein CheY	Chemotaxis protein	Chemotaxis protein CheY	Chemotaxis protein CheY	RESPONSE REGULATOR	Chemotaxis protein cheY homolog	Chemotaxis response regulator CheY	Chemotaxis protein CheY	Chemotaxis protein cheY	Response regulator receiver	Chemotaxis respons regulator	Chemotaxis protein	
ECOLI01840	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	Probable protein-glutamate methylesterase BB_0415	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	predicted by Codon_usage predicted by Homology predicted by FrameD PROTEIN-GLUTAMATE METHYLESTERASE	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	Residues 1 to 349 of 349 are 99 pct identical to residues 1 to 349 of a 349 aa protein from Escherichia coli O157:H7 ref: NP_310620.1 response regulator for chemotaxis CheA sensor	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon	Protein-glutamate methylesterase protein	IPR000673: CheB methylesterase; IPR001789: Response regulator receiver methyl esterase, response regulator for chemotaxis (cheA sensor)	similar to Salmonella typhi CT18 protein-glutamate methylesterase protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	Protein-glutamate methylesterase	Chemotaxis response regulator protein-glutamate methylesterase	Chemotaxis protein CheB	Protein-glutamate methylesterase	cheA sensor; protein methylesterase; Code: NT; COG: COG2201 response regulator for chemotaxis	response regulator for chemotaxis (cheA sensor); Code: NT; COG: COG2201 protein methylesterase	CheB methylesterase	
ECOLI01841	Chemotaxis protein methyltransferase	CheR chemotaxis protein methyltransferase	Chemotaxis protein methyltransferase CheR	Chemotaxis protein methyltransferase 2	Methylase of chemotaxis methyl-accepting protein	Methylase of chemotaxis methyl-accepting proteins	Chemotaxis methyltransferase	Chemotaxis protein methyltransferase	Chemotaxis protein methyltransferase	Chemotaxis protein methyltransferase	Chemotaxis protein methyltransferase	Chemotaxis protein methyltransferase	Chemotaxis protein methyltransferase 3	pseudo	Chemotaxis protein methyltransferase	Chemotaxis protein methyltransferase CheR	Chemotaxis protein methyltransferase	predicted by Codon_usage predicted by Homology predicted by FrameD CHEMOTAXIS PROTEIN METHYLTRANSFERASE	Chemotaxis protein methyltransferase	Chemotaxis protein methyltransferase CheR	Response regulator for chemotaxis; protein glutamate methyltransferase	Methylase of chemotaxis methyl-accepting protein	Chemotaxis protein methyltransferase	Residues 1 to 286 of 286 are 99 pct identical to residues 1 to 286 of a 286 aa protein from Escherichia coli K12 ref: NP_416398.1 response regulator for chemotaxis; protein glutamate methyltransferase	Chemotaxis protein methyltransferase	CheR-type MCP methyl-transferase:Generic methyl- transferase	Probable chemotaxis protein methyltransferase	Chemotaxis protein methyltransferase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark chemotaxis protein methyltransferase	
ECOLI01842	Methyl-accepting chemotaxis protein IV	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	PUTATIVE METHYL-ACCEPTING CHEMOTAXIS PROTEIN	Methyl-accepting chemotaxis protein IV, peptide sensor receptor	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Residues 2 to 534 of 534 are 98 pct identical to residues 1 to 533 of a 533 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288322.1 methyl-accepting chemotaxis protein IV, peptide sensor receptor	pseudo	Methyl-accepting chemotaxis protein IV	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015; match to protein family HMM PF00672 methyl-accepting chemotaxis protein	peptide sensor receptor; Code: NT; COG: COG0840 methyl-accepting chemotaxis protein IV	methyl-accepting chemotaxis sensory transducer	methyl-accepting chemotaxis sensory transducer	Hypothetical protein precursor	methyl-accepting chemotaxis sensory transducer	methyl-accepting chemotaxis sensory transducer PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer KEGG: rfr:Rfer_3119 methyl-accepting chemotaxis sensory transducer	Chemotaxis sensory transducer precursor	Hypothetical protein precursor	Methyl-accepting chemotaxis sensory transducer	hemolysin secretion protein identified by match to protein family HMM PF00015; match to protein family HMM PF00672	methyl-accepting chemotaxis sensory transducer PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer KEGG: sdn:Sden_3066 chemotaxis sensory transducer	Methyl-accepting chemotaxis protein precursor	putative methyl-accepting chemotaxis transducer	putative methyl-accepting chemotaxis transducer Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	methyl-accepting chemotaxis sensory transducer	lambdoid prophage Qin Tail fiber assembly protein-like protein Code: NT; COG: COG0840	
ECOLI01843	Methyl-accepting chemotaxis protein II	Methyl-accepting chemotaxis protein II	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein II	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein II, aspartate sensor receptor	Methyl-accepting chemotaxis protein	Residues 8 to 560 of 560 are 99 pct identical to residues 1 to 553 of a 553 aa protein from Escherichia coli K12 ref: NP_416400.1 methyl-accepting chemotaxis protein II, aspartate sensor receptor	Probable methyl-accepting chemotaxis protein II	IPR003660: Histidine kinase, HAMP region; IPR004089: Bacterial chemotaxis sensory transducer; IPR004090: Methyl-accepting chemotaxis protein;IPR004091: Aspartate chemoreceptor protein methyl accepting chemotaxis protein II, aspartate sensor-receptor	Methyl-accepting chemotaxis protein II	Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer	Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer	aspartate sensor receptor; Code: NT; COG: COG0840 methyl-accepting chemotaxis protein II	identified by match to protein family HMM PF00015; match to protein family HMM PF00672 methyl-accepting chemotaxis protein	Citation: Ward,M.J., Harrison,D.M., Ebner,M.J., Armitage,J.P., (1995) Mol. Microbiol. 18:115-121 Methyl accepting chemotaxis protein, McpB	Methyl-accepting chemotaxis sensory transducer precursor	methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02203	Methyl-accepting chemotaxis protein II	Chemotaxis sensory transducer precursor	Methyl-accepting chemotaxis sensory transducer precursor	Methyl-accepting chemotaxis protein II	methyl-accepting chemotaxis sensory transducer PFAM: ligand binding Tar domain protein; histidine kinase, HAMP region domain protein; chemotaxis sensory transducer KEGG: bur:Bcep18194_B0157 methyl-accepting chemotaxis sensory transducer	methyl-accepting chemotaxis sensory transducer	methyl-accepting chemotaxis sensory transducer PFAM: ligand binding Tar domain protein; histidine kinase, HAMP region domain protein; chemotaxis sensory transducer KEGG: bcn:Bcen_5360 methyl-accepting chemotaxis sensory transducer	methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02203	methyl-accepting chemotaxis sensory transducer PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein KEGG: son:SO0987 methyl-accepting chemotaxis protein	methyl-accepting chemotaxis sensory transducer PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer KEGG: rsp:RSP_2442 methyl accepting chemotaxis protein, McpB	
ECOLI01844	Chemotaxis protein cheW	Probable purine-binding chemotaxis protein	Chemotaxis signal transduction protein	Chemotaxis protein cheW	Chemotaxis protein	Purine binding chemotaxis protein	Chemotaxis protein CheW	Chemotaxis protein cheW	Chemotaxis protein CheW	Chemotaxis protein CheW	Purine-binding chemotaxis protein CheW	Chemotaxis protein	predicted by Codon_usage predicted by Homology predicted by FrameD CHEMOTAXIS PROTEIN	Chemotaxis protein CheW	chemotaxis signal transduction protein	Chemotaxis protein CheW	Chemotaxis protein cheW	Chemotaxis protein CheW	Chemotaxis signal transduction protein	Chemotaxis protein	Residues 1 to 167 of 167 are 100 pct identical to residues 1 to 167 of a 167 aa protein from Escherichia coli O157:H7 ref: NP_310624.1 positive regulator of CheA protein activity	Chemotaxis protein CheW	CheW-like domain	chemotaxis signal transduction protein	Purine binding chemotaxis protein	Purine-binding chemotaxis protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark chemotaxis protein	IPR002545: CheW-like protein purine-binding chemotaxis protein; regulation	similar to Salmonella typhi CT18 purine binding chemotaxis protein purine binding chemotaxis protein	
ECOLI01845	Chemotaxis protein cheA	Chemotaxis protein CheA	Probable two-component sensor	Chemotaxis protein histidine kinase	Chemotaxis protein histidine kinase	Chemotaxis protein CheA	Chemotaxis protein cheA	Chemotaxis protein	Chemotaxis two-component sensor kinase CheA	Chemotaxis protein cheA	identified by similarity to SP:P29072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895 chemotaxis histidine kinase	Chemotaxis protein CheA	Chemotaxis protein CheA	Chemotaxis protein CheA	Chemotaxis protein CheA	Chemotaxis protein	predicted by Codon_usage predicted by Homology predicted by FrameD CHEMOTAXIS PROTEIN (SENSORY TRANSDUCTION HISTIDINE KINASE)	Chemotaxis protein CheA	Chemotaxis protein CheA	Sensory transducer kinase between chemo-signal receptors and CheB and CheY	Chemotaxis protein histidine kinase	Residues 19 to 672 of 672 are 99 pct identical to residues 1 to 654 of a 654 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288325.1 sensory transducer kinase between chemo- signal receptors and CheB and CheY	Chemotaxis protein CheA	Probable chemotaxis sensor histidine kinase transcription regulator protein	Probable chemotaxis sensor histidine kinase transcription regulator protein	Chemotaxis protein cheA	two-component hybrid sensor and regulator	Chemotaxis protein CheA	Chemotaxis two-component sensor histidine kinase protein	
ECOLI01846	Chemotaxis protein motB	Chemotaxis MotB protein	Chemotaxis protein MotB	Motility protein B	Chemotaxis protein MotB	Chemotaxis motB protein	identified by match to PFAM protein family HMM PF00691 chemotaxis motB protein	Chemotaxis MotB protein, putative	Chemotaxis protein MotB	Chemotaxis protein MotB	Chemotaxis motB protein	Chemotaxis protein MotB	CHEMOTAXIS MOTB PROTEIN	Chemotaxis protein motB	Residues 1 to 308 of 308 are 99 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288326.1 enables flagellar motor rotation, linking torque machinery to cell wall	Chemotaxis MotB protein	Bacterial outer membrane protein	MotB protein	Probable chemotaxis (Motility protein b) transmembrane	Chemotaxis protein	similar to flagellar motor protein hypothetical protein	conserved gene chemotaxis (motility protein B) transmembrane	similar to flagellar motor protein hypothetical protein	Chemotaxis motB protein	enables flagellar motor rotation, linking torque machinery to cell wall	similar to Salmonella typhi CT18 motility protein B motility protein B	similar to BRA1144, chemotaxis motB protein MotB, chemotaxis protein	Chemotaxis MotB protein	Chemotaxis MotB protein	
ECOLI01847	Chemotaxis protein motA	Chemotaxis protein	Chemotaxis protein MotA	Chemotaxis protein motA	Motility protein A	Chemotaxis protein MotA	Flagellar motor protein	Chemotaxis motA protein	similar to GP:14023314, and SP:P97215; identified by sequence similarity; putative chemotaxis motA protein	Chemotaxis protein MotA	Chemotaxis protein MotA	Chemotaxis protein	predicted by Codon_usage predicted by Homology predicted by FrameD CHEMOTAXIS (MOTILITY PROTEIN A) TRANSMEMBRANE	Chemotaxis motA protein	Chemotaxis protein MotA	Chemotaxis MotA protein	CHEMOTAXIS MOTA PROTEIN	Proton conductor component of motor; no effect on switching	flagellar motor protein MotA	Residues 1 to 295 of 295 are 98 pct identical to residues 1 to 295 of a 295 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288327.1 proton conductor component of motor; no effect on switching	Chemotaxis MotA protein	Probable chemotaxis (Motility protein A) transmembrane	MotA protein	Chemotaxis protein	Chemotaxis protein	similar to proton conductor component of motor, chemotaxis and motility protein hypothetical protein	conserved gene chemotaxis (motility protein A) transmembrane	similar to proton conductor component of motor, chemotaxis and motility protein hypothetical protein	Chemotaxis motA protein	
ECOLI01848	Flagellar transcriptional activator flhC	Flagellar regulon master regulator subunit FlhC	Flagellar transcriptional activator flhC	Flagellar transcriptional activator FlhC	Flagellar transcriptional activator FlhC	Flagellar transcriptional activator	Flagellar transcriptional activator FlhC	Flagellar transcriptional activator FlhC	Flagellar transcriptional activator flhC	Residues 1 to 192 of 192 are 100 pct identical to residues 1 to 192 of a 192 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288328.1 regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor?	Flagellum biosynthesis transcription activator	Probable flagellar transcriptional activator transcription regulator protein	Probable flagellar transcriptional activator transcription regulator protein	Flagellum biosynthesis transcription activator	IPR007944: Flagellar transcriptional activator FlhC regulator of flagellar biosynthesis, acts on class 2 operons	similar to Salmonella typhi CT18 flagellar transcriptional activator flagellar transcriptional activator	pseudo	Flagellar transcriptional activator flhC	Flagellar transcriptional activator FlhC	acting on class 2 operons; transcription initiation factor regulator of flagellar biosynthesis	regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor FlhC	flagellar transcriptional activator	flagellar regulon master regulator subunit FlhC	Flagellar transcriptional activator FlhC	flagellar transcriptional activator FlhC	flagellar transcriptional activator FlhC	Flagellar transcriptional activator FlhC	transcription initiation factor regulator of flagellar biosynthesis acting on class 2 operons	Flagellar transcriptional activator, FlhC subunit	
ECOLI01849	Transcriptional activator flhD	Flagellar regulon master regulator subunit FlhD	Transcriptional activator flhD	Transcriptional activator flhD	Transcriptional activator flhD	Transcriptional activator flhD	Transcriptional activator flhD	Flagellar transcriptional activator FlhD	Transcriptional activator flhD	pseudo	Transcriptional activator flhD	Transcriptional activator flhD	Transcriptional activator flhD	regulator of flagellar biosynthesis, acts on class 2 operons	similar to Salmonella typhi CT18 flagellar transcriptional activator FlhD flagellar transcriptional activator FlhD	Transcriptional activator flhD	Transcriptional activator flhD	Flagellar transcriptional activator	acting on class 2 operons; transcriptional initiation factor regulator of flagellar biosynthesis	regulator of flagellar biosynthesis, acting on class 2 operons; transcriptional initiation factor FlhD	flagellar transcriptional activator	flagellar transcriptional activator FlhD	Flagellar transcriptional activator	flagellar transcriptional activator FlhD	putative flagellar transcriptional activator transcription regulator protein	transcriptional initiation factor regulator of flagellar biosynthesis, acting on class 2 operons	Flagellar transcriptional activator, FlhD subunit	Transcriptional activator flhD	Hypothetical protein	
ECOLI03313	Insertion element IS1 1/5/6 protein insB	Probable insertion element IS1 1/5/6 protein	identified by match to protein family HMM PF03400 InsB	insertion element IS1 1/5/6 protein InsB	Transposase	IS1 transposase InsAB'	Transposase IS1 orfB	

ECOLI01850	Universal stress protein C	Universal stress protein C	Universal stress protein C	putative universal stress protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Universal stress protein C	Code: T; COG: COG0589 putative regulator	Code: T; COG: COG0589 putative regulator	Code: T; COG: COG0589 putative regulator	Putative uncharacterized protein	Putative uncharacterized protein yecG	Putative universal stress protein	putative regulator Code: T; COG: COG0589	universal stress protein containing UspA domain PFAM: UspA domain protein KEGG: vch:VC0076 universal stress protein A	universal stress protein	UspA domain protein	Putative regulator	Putative uncharacterized protein	Universal stress protein C	UspA domain protein	Universal stress protein	Universal stress protein C	UspA domain protein	Universal stress protein C	Putative uncharacterized protein	UspA domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01851	Alpha,alpha-trehalose-phosphate synthase	alpha,alpha-trehalose-phosphate synthase 56 kDa subunit;	Synthase subunit of trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the storage carbohydrate trehalose; also found in a monomeric form; expression is induced by the stress response and repressed by the Ras-cAMP pathway. [Source:SGD;Acc:S000000330]	sp|O74932 Yarrowia lipolytica Alpha, alpha-trehalose-phosphate synthase [UDP-forming], identified start	OtsA protein	Alpha,alpha-trehalose-phosphate synthase [UDP- forming] [Source:GeneDB_Spombe;Acc:SPAC328.03]	gi|586113|sp|Q07158|TPS1_KLULA Kluyveromyces lactis Alpha, alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase), start by similarity	Glucosylglycerol-phosphate synthase	Trehalose-6-phosphate synthase	ALPHA,ALPHA TREHALOSE-PHOSPHATE SYNTHASE;01_0800, ALPHA,ALPHA TREHALOSE-PHOSPHATE SYNTHASE, TPSA_ASPNG, E. cuniculi gene DNA cross-ref : AJ006825, gene found by Glimmer;	highly similar to uniprot|Q00764 Saccharomyces cerevisiae YBR126c TPS1 alpha alpha-trehalose-phosphate synthase;	Alpha, alpha-trehalose-phosphate synthase	Alpha, alpha-trehalose-phosphate synthase (UDP- forming) related protein	UDP-forming alpha,alpha-trehalose-phosphate synthase	Alpha,alpha-trehalose-phosphate synthase	Trehalose-6-phosphate synthase	Trehalose-phosphate synthase	Alpha,alpha-trehalose-phosphate synthase	trehalose-6-phosphate synthase	go_component: cytoplasm [goid 0005737]; go_component: alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) [goid 0005946]; go_function: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity [goid 0003825]; go_process: carbohydrate metabolism [goid 0005975]; go_process: response to stress [goid 0006950] alpha,alpha-trehalose-phosphate synthase (UDP-forming), putative	glimmer prediction; Very similar to trehalose-6-phosphate synthase (OtsA) of Rhizobium sp.  NGR234 sym plasmid. S. meliloti appears to lack OtsB probable OtsA trehalose-6-phosphate synthase	Putative trehalose-6-phosphate synthase	Alpha,alpha-trehalose-phosphate synthase	Putative glycosyltransferase	Alpha,alpha-trehalose-phosphate synthase	similar to AX063735-1|CAC25109.1| percent identity: 82 in 478 aa putative trehalose-6-phosphate synthase	Putative alpha,alpha-trehalose-phosphate synthase	Trehalose-6-phosphate synthase	Probable alpha,alpha-trehalose-phosphate synthase protein	
ECOLI01852	Trehalose-phosphatase	Trehalose-phosphatase	Trehalose-6-phosphate phosphatase	Trehalose-6-phosphate phophatase related protein	Trehalose-phosphatase	Putative trehalose-6-phosphatase	Trehalose phosphatase	Trehalose-6-phosphatase	Putative trehalose-phosphatase	Trehalose-phosphatase	Trehalose-phosphatase	Putative trehalose-phosphatase	Trehalose-6-phosphate phophatase, biosynthetic	similar to AX064857-1|CAC25668.1| percent identity: 70 in 254 aa putative trehalose-6-phosphate phophatase	trehalose-6-phosphate phosphatase	Putative trehalose-6-phosphate phophatase, biosynthetic	Trehalose-phosphatase protein	SCD95A.21, possible phosphatase, len: 290 aa; similar to TR:O27788 (EMBL:AE000931) Methanobacterium thermoautotrophicum trehalose-6-phosphate phophatase related protein MTH1760, 264 aa; fasta scores: opt: 197 z-score: 223.2 E(): 5.7e-05; 28.3% identity in 258 aa overlap putative phosphatase	Residues 20 to 285 of 285 are 99 pct identical to residues 1 to 266 of a 266 aa protein from Escherichia coli K12 ref: NP_416411.1 trehalose-6-phosphate phophatase, biosynthetic	Probable trehalose-phosphatase protein	Trehalose-phosphatase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark trehalose-6-phosphate phosphatase	Trehalose-6-phosphate phosphatase	trehalose-6-phosphate phophatase, biosynthetic	similar to Salmonella typhi CT18 trehalose phosphatase trehalose phosphatase	Trehalose-6-phosphate phosphatase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme trehalose-6-phosphate phophatase, biosynthetic	Trehalose-phosphate phosphatase	trehalose-6-phosphate phosphatase	
ECOLI01853	L-arabinose transport system permease protein araH	Lmo1390 protein	L-arabinose transport system, permease protein	High-affinity L-arabinose transport system; membrane protein, 1	L-arabinose transport system permease protein	Product confidence : putative Gene name confidence : hypothetical putative sugar ABC transporter permease protein	L-arabinose ABC transporter, permease protein	L-arabinose ABC transporter, permease protein	ABC-type arabinose transport system, permease component	Partial high-affinity L-arabinose transport system; membrane protein, 2	ribose ABC transporter, permease protein	Lin1427 protein	Residues 1 to 329 of 329 are 100 pct identical to residues 1 to 329 of a 329 aa protein from Escherichia coli K12 ref: NP_416412.1 ABC-type arabinose transport system, permease component	L-arabinose transport system permease protein	ABC L-arabinose transporter, permease subunit araH	identified by match to protein family HMM PF02653 ABC transporter, permease protein, putative	Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components AraH protein	identified by match to protein family HMM PF02653 L-arabinose ABC transporter, permease protein	inner-membrane translocator	Code: G; COG: COG1172 ABC-type arabinose transport system, permease component	Code: G; COG: COG1172 ABC-type arabinose transport system, permease component	inner-membrane translocator	ABC sugar transporter, inner-membrane subunit	Code: G; COG: COG1172 ABC-type arabinose transport system, permease component	putative transmembrane component of ABC transporter similarity:fasta; with=UniProt:Q92W57_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative sugar ABC transporter permease protein.; length=317; id 87.500; 312 aa overlap; query 3-314; subject 4-314	Inner-membrane translocator	L-arabinose transport system, permease protein identified by match to protein family HMM PF02653	probable sugar ABC transporter, permease protein similar to SMb20506 [Sinorhizobium meliloti] Similar to swissprot:Q92W57 Putative location:bacterial inner membrane Psort-Score: 0.5946; go_component: membrane [goid 0016020]; go_component: extrachromosomal DNA [goid 0046821]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810]	Probable L-arabinose transmembrane ABC transporter protein	
ECOLI01854	Arabinose import ATP-binding protein araG	Arabinose import ATP-binding protein araG	Arabinose import ATP-binding protein araG	Arabinose import ATP-binding protein araG	Residues 16 to 519 of 519 are 98 pct identical to residues 1 to 504 of a 504 aa protein from Escherichia coli O157:H7 ref: NP_310635.1 ATP-binding component of high-affinity L-arabinose transport system	Arabinose import ATP-binding protein araG	Arabinose import ATP-binding protein araG	Arabinose import ATP-binding protein araG	Code: G; COG: COG1129 ATP-binding component of high-affinity L-arabinose transport system	Code: G; COG: COG1129 ATP-binding component of high-affinity L-arabinose transport system	Code: G; COG: COG1129 ATP-binding component of high-affinity L-arabinose transport system	Arabinose import ATP-binding protein araG	L-arabinose transport ATP-binding protein	Arabinose import ATP-binding protein araG	ABC transporter related	L-arabinose transport ATP-binding protein	L-arabinose ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005	L-arabinose transport ATP-binding protein	ABC-type arabinose transporter, ATP-binding protein	L-arabinose transport ATP-binding protein	L-arabinose transport ATP-binding protein AraG	ABC transporter related	ATP-binding component of high-affinity L- arabinose transport system	L-arabinose ABC transporter, ATP-binding protein	ABC transporter-related protein	ABC transporter related	Subunit of L-arabinose ABC transporter containing ATP-binding components	L-arabinose ABC transporter, ATP-binding protein	L-arabinose ABC transporter, ATP-binding protein	
ECOLI01855	L-arabinose-binding periplasmic protein	L-arabinose-binding periplasmic protein	L-arabinose-binding periplasmic protein	Product confidence : putative Gene name confidence : hypothetical putative ABC transporter periplasmic sugar-binding protein	L-arabinose ABC transporter, periplasmic L- arabinose-binding protein	L-arabinose-binding periplasmic protein	L-arabinose-binding periplasmic protein	L-arabinose-binding protein	similar to Escherichia coli K12 L-arabinose-binding periplasmic protein gi: 1788211 (330 aa). BLAST with identity of 97% in 329 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	L-arabinose-binding periplasmic protein	Probable l-arabinose-binding periplasmic (Pbp) abc transporter protein	ABC transporter, periplasmic L-arabinose-binding protein araF	Periplasmic sugar-binding proteins RbsB protein	identified by match to protein family HMM PF00532 L-arabinose ABC transporter, periplasmic L-arabinose-binding protein	Periplasmic binding protein/LacI transcriptional regulator	Code: G; COG: COG1879 L-arabinose-binding periplasmic protein	periplasmic binding protein/LacI transcriptional regulator	Periplasmic binding protein/LacI transcriptional regulator	Code: G; COG: COG1879 L-arabinose-binding periplasmic protein	putative solute-binding component of ABC transporter similarity:fasta; with=UniProt:Q92W55_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative ABC transporter periplasmic sugar-binding protein.; length=327; id 84.404; 327 aa overlap; query 1-327; subject 1-327	putative sugar ABC transporter, substrate-binding protein similar to SMb20508 [Sinorhizobium meliloti] Similar to swissprot:Q92W55 Putative location:bacterial periplasmic space Psort-Score: 0.9312; go_component: extrachromosomal DNA [goid 0046821]	L-arabinose-binding periplasmic protein	L-arabinose-binding periplasmic protein precursor	L-arabinose-binding periplasmic protein	Periplasmic binding protein/LacI transcriptional regulator precursor	L-arabinose-binding periplasmic protein precursor	ABC sugar(Arabinose) transporter, periplasmic ligand binding protein	L-arabinose ABC transporter, periplasmic L-arabinose-binding protein identified by match to protein family HMM PF00532	L-arabinose-binding periplasmic protein precursor	
ECOLI01856	Ferritin-like protein 2	Ferritin-like protein	Ferritin-like protein 2	Ferritin-like protein 2	Residues 1 to 167 of 167 are 100 pct identical to residues 1 to 167 of a 167 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288337.1 ferritin-like protein	IPR009040: Ferritin-like ferritin-like protein	similar to Salmonella typhi Ty2 ferritin-like protein ferritin-like protein	Ferritin-like protein	Code: P; COG: COG1528 ferritin-like protein	Code: P; COG: COG1528 ferritin-like protein	Code: P; COG: COG1528 ferritin-like protein	Ferritin-like protein 2	Ferritin-like protein	ferritin-like protein Code: P; COG: COG1528	ferritin-like protein	Ferritin, Dps family protein	Ferritin-like protein	Putative uncharacterized protein	Ferritin family protein	Predicted ferritin-like protein	Ferritin family protein	Ferritin Dps family protein	Ferritin family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Ferritin-like protein	Ferritin, Dps family protein	Ferritin, Dps family protein	
ECOLI01857	Uncharacterized protein yecJ	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein	orf hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yecJ	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yecJ	Putative uncharacterized protein yecJ	
ECOLI01858	Uncharacterized protein yecR	Hypothetical protein yecR	Putative uncharacterized protein	Residues 1 to 107 of 107 are 99 pct identical to residues 1 to 107 of a 107 aa protein from Escherichia coli K12 ref: NP_416417.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative outer membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yecR	conserved hypothetical protein	conserved hypothetical protein	Putative lipoprotein precursor	Putative uncharacterized protein	Putative lipoprotein	Predicted protein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Putative lipoprotein	
ECOLI01859	Ferritin-1	Ferritin	Ferritin, putative	Probable ferritin-1	Ferritin like protein	Ferritin A	Ferritin	Ferritin	Putative ferritin homolog	Ferritin	Probable ferritin	RsgA	Ferritin	Ferritin	Ferritin-like protein	Ferritin	Ferritin	Probable ferritin	Ferritin-like protein	Ferritin	Ferritin	Ferritin	putative ferritin	Ferritin-1	identified by match to protein family HMM PF00210 ferritin	Ferritin	Ferritin	Ferritin	Ferritin	
ECOLI01860	Uncharacterized protein yecH	Putative uncharacterized protein yecH	hypothetical protein	Hypothetical protein yecH	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yecH	Residues 1 to 79 of 79 are 98 pct identical to residues 1 to 79 of a 79 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288341.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein yecH	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein KEGG: shm:Shewmr7_2500 hypothetical protein	Hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein KEGG: ecp:ECP_1849 hypothetical protein YecH	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	
ECOLI01861	Tyrosine-specific transport protein	Tyrosine-specific transport protein	Tyrosine-specific transport protein	Probable tyrosine-specific transport protein	putative tyrosine-specific transport protein	Tyrosine-specific transport protein	Tyrosine-specific transport protein	Tyrosine-specific transport protein	Tyrosine-specific transport protein	Tyrosine-specific transport protein	Tyrosine-specific transport system	Tyrosine-specific transport protein	Residues 1 to 403 of 403 are 99 pct identical to residues 1 to 403 of a 403 aa protein from Escherichia coli K12 ref: NP_416420.1 tyrosine-specific transport system	Tyrosine Transport	Tyrosine-specific transport protein	IPR002091: Aromatic amino acid permease; IPR002422: Amino acid/polyamine transporter, family II HAAAP family, tyrosine-specific transport protein	similar to Salmonella typhi CT18 tyrosine-specific transport protein tyrosine-specific transport protein	HAAAP family tyrosine:H+ symporter, tyrP	tyrosine-specific transport protein	Amino acid permeases SdaC protein	HAAAP family tyrosine-specific transport protein	Putative to amino acid permeases	Code: E; COG: COG0814 tyrosine-specific transport system	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter tyrosine-specific transport protein (HAAAP family)	Code: E; COG: COG0814 tyrosine-specific transport system	Amino acid permeases	Code: E; COG: COG0814 tyrosine-specific transport system	Tyrosine-specific transport protein	Aromatic amino acid transporter precursor	
ECOLI01862	Uncharacterized protein yecA	Putative uncharacterized protein	Putative uncharacterized protein STY2146	Hypothetical protein yecA	Putative uncharacterized protein yecA	SEC-C motif	Residues 1 to 221 of 221 are 100 pct identical to residues 1 to 221 of a 221 aa protein from Escherichia coli K12 ref: NP_416421.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative metal-binding protein related to the C-terminal domain of SecA	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Predicted metal-binding protein related to the C-terminal domain of SecA Hypothetical protein	Lipoprotein, putative	Putative metal-binding protein	conserved hypothetical protein	identified by match to protein family HMM TIGR02292 YecA family protein	Best Blastp Hit: gb|AAF41466.1| (AE002457) conserved hypothetical protein [Neisseria meningitidis MC58] conserved hypothetical protein	Code: R; COG: COG3318 conserved hypothetical protein	Code: R; COG: COG3318 conserved hypothetical protein	YgfB and YecA	Code: R; COG: COG3318; orf conserved hypothetical protein	Putative uncharacterized protein	YgfB and YecA	YgfB and YecA	Putative uncharacterized protein yecA	yecA family protein TIGRFAM: yecA family protein PFAM: SEC-C motif domain protein KEGG: xcv:XCVc0036 hypothetical protein	yecA family protein TIGRFAM: yecA family protein PFAM: SEC-C motif domain protein KEGG: rpe:RPE_2282 YecA family protein	conserved hypothetical protein Conserved hypothetical protein. Homology to ct227 of C. tepidum of 32% (trembl|Q8KA93). Pfam: SEC-C motif This motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain. no TMHs	
ECOLI01863	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	Phosphatidylglycerophosphate synthase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol-glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol-glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	similar to GB:M64929, SP:Q00005, SP:Q00007,  and PID:190422; identified by sequence similarity; putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol-glycerol-3-phosphate 3- phosphatidyltransferase	Probable phosphatidylglycerophosphate synthase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	PgsA	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	Phosphatidylglycerophosphate synthase	Phosphatidylglycerophosphate synthase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	Phosphatidylglycerophosphate synthase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	Probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	Lmo1396 protein	Phosphatidylglycerophosphate synthase	CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase	
ECOLI01864	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	Excision nuclease chain C	UvrABC system protein C	similar to GP:1736572; identified by sequence similarity; putative excinuclease ABC, subunit C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	UvrABC system protein C	
ECOLI01865	Response regulator uvrY	Response regulator	Invasion response-regulator	Response regulator uvrY	Transcriptional regulator, LuxR family	Two-component response regulator	Transcriptional regulator, LuxR family	Response regulator uvrY	Response regulator	Residues 1 to 218 of 218 are 99 pct identical to residues 1 to 218 of a 218 aa protein from Escherichia coli K12 ref: NP_416424.1 putative 2-component transcriptional regulator	Response regulator protein	Transcription regulator	IPR000792: Bacterial regulatory protein, LuxR family; IPR001789: Response regulator receiver putative response regulator (LuxR/UhpA familiy)	similar to Salmonella typhi Ty2 invasion response-regulator invasion response-regulator	Response regulator protein	response regulator, GacA	Response regulator, LuxR family (CheY, HTH domains)	Putative LuxR/UhpA family response regulator	identified by match to protein family HMM PF00072; match to protein family HMM PF00196 DNA-binding response regulator	identified by similarity to SP:Q52376; match to protein family HMM PF00072; match to protein family HMM PF00196 response regulator, DNA binding component GacA	regulatory protein, LuxR:Response regulator receiver	Code: TK; COG: COG2197 putative 2-component transcriptional regulator	Evidence 2b : Function of strongly homologous gene; PubMedId : 11022030, 12193630; Product type r : regulator putative regulator in two-component regulatory system with BarA (LuxR/UhpA familiy)	Code: TK; COG: COG2197 putative 2-component transcriptional regulator	transcription regulator	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain COG2197	Code: TK; COG: COG2197 putative 2-component transcriptional regulator	Response regulator receiver	Two component transcriptional regulator, LuxR family	
ECOLI01866	Uncharacterized protein yecF	Hypothetical protein yecF	Putative uncharacterized protein	Putative uncharacterized protein yecF	Residues 1 to 74 of 74 are 100 pct identical to residues 1 to 74 of a 74 aa protein from Escherichia coli K12 ref: NP_416425.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YecF of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein yecF	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yecF	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01867	Regulatory protein sdiA	Cell-division regulatory protein	Regulatory protein sdiA	similar to GP:13508495; identified by sequence similarity; putative transcriptional regulator, LuxR autoinducer regulated family	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR HSL-DEPENDENT PROTEIN	TRANSCRIPTIONAL ACTIVATOR, LUXR FAMILY	Transcriptional regulator of ftsQAZ gene cluster	unknown protein	Residues 5 to 211 of 212 are 96 pct identical to residues 1 to 207 of a 240 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288377.1 transcriptional regulator of ftsQAZ gene cluster	Similar to probable transcription regulator SdiA of Escherichia coli	identified by match to protein family HMM PF00196; match to protein family HMM PF03472 autoinducer-binding transcriptional regulator LuxR	Transcriptional activator, LuxR/UhpA family of regulators	Transcriptional regulator protein	IPR000792: Bacterial regulatory protein, LuxR family; IPR005143: Autoinducer binding domain transcriptional regulator of ftsQAZ gene cluster (LuxR/UhpA family)	similar to Salmonella typhi CT18 cell-division regulatory protein cell-division regulatory protein	similar to BR0190, transcriptional regulator, LuxR autoinducer regulated family transcriptional regulator, LuxR autoinducer regulated family	LuxR, transcriptional regulator	Transcriptional regulator of ftsQAZ gene cluster	identified by match to protein family HMM PF00196; match to protein family HMM PF01851; match to protein family HMM PF03472 autoinducer transcriptional regulator AhlR	identified by match to protein family HMM PF00196; match to protein family HMM PF03472 autoinducer-binding transcriptional regulator, LuxR family	regulatory protein, LuxR:Autoinducer-binding	Transcriptional regulatory protein, LuxR family	Code: K; COG: COG2771 transcriptional regulator of ftsQAZ gene cluster	Bacterial regulatory protein, LuxR family:Autoinducer binding domain	Bacterial regulatory protein (LuxR family) and Autoinducer binding domain, COG2771: DNA-binding HTH domain-containing proteins Citation: Puskas A, Greenberg EP, Kaplan S, Schaefer AL (1997) J Bacteriol.  179(23):7530-7. transcriptional regulator, LuxR family	Code: K; COG: COG2771 transcriptional regulator of ftsQAZ gene cluster	transcriptional regulator, LuxR family	transcriptional regulator, LuxR family	transcriptional regulator, LuxR family	
ECOLI01868	Uncharacterized amino-acid ABC transporter ATP- binding protein yecC	ABC-type polar amino acid transport system, ATPase component	Putative ABC-transport ATP-binding protein	Hypothetical amino-acid ABC transporter ATP- binding protein yecC	Amino acid ABC transporter, ATP-binding protein	Amino acid ABC transporter, ATP-binding protein	Cystine ABC transporter, ATP-binding protein, putative	Amino acid ABC transporter, ATP-binding protein	Putative ATP-binding component of a transport system	ABC-type polar amino acid transport system, ATPase component	ABC-type polar amino acid transport system, ATPase component	Residues 1 to 250 of 250 are 99 pct identical to residues 1 to 250 of a 250 aa protein from Escherichia coli K12 ref: NP_416427.1 putative ATP-binding component of a transport system	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC-type polar amino acid transport system, ATPase component	similar to Salmonella typhi Ty2 putative ABC transport ATP-binding protein putative ABC transport ATP-binding protein	Putative ABC transporter ATP-binding protein - aspartate/glutamate transport	cystine transport ATP-binding protein	ABC-type polar amino acid transport system, ATPase component GlnQ protein	Cysteine ABC transporter, ATP-binding protein, putative	Putative ABC-type polar amino acid transport system	identified by match to protein family HMM PF00005 amino acid ABC transporter, ATP-binding protein	ABC transporter	Code: E; COG: COG1126 putative ATP-binding component of a transport system	Code: E; COG: COG1126 putative ATP-binding component of a transport system	putative ABC transporter ATP-binding component	ABC transporter related	ABC transporter-like	ABC-type polar amino acid transport system, ATPase component COG1126	Code: E; COG: COG1126 putative ATP-binding component of a transport system	ABC transporter related PFAM: ABC transporter related: (9.1e-62) SMART: ATPase: (1.9e-19) KEGG: vch:VC0008 polar amino acid transport system ATP-binding protein, ev=4e-85, 65% identity	
ECOLI01869	Inner membrane amino-acid ABC transporter permease protein yecS	Cystine ABC tranporter, permease protein, putative	Amino acid ABC transporter, permease protein	Putative ABC transporter membrane protein	Inner membrane amino-acid ABC transporter permease protein yecS	Putative amino-acid ABC transporter, permease protein	Putative amino-acid ABC transporter, permease protein	Putative amino-acid transport system permease protein	Cystine ABC tranporter, permease protein, putative	Putative transport system permease protein	amino acid ABC transporter (permease)	Amino acid ABC transporter	Residues 1 to 222 of 222 are 100 pct identical to residues 1 to 222 of a 222 aa protein from Escherichia coli K12 ref: NP_416428.1 putative transport system permease protein (former yecC)	Putative amino-acid ABC transporter	ABC transporter	Amino acid ABC transporter	IPR000515: Binding-protein-dependent transport systems inner membrane component putative ABC-type amino acid transporter, permease component	similar to Salmonella typhi CT18 putative ABC transporter membrane protein putative ABC transporter membrane protein	hypothetical protein, similar to ABC transporter, permease protein	Putative amino-acid ABC transporter	Putative amino acid permease integral membrane protein	hypothetical protein, similar to ABC transporter, permease protein	Similar to: HI1079, YA79_HAEIN probable amino-acid ABC transporter permease protein	ABC-type amino acid transport system, permease component ArtM protein	Cysteine ABC transporter, permease protein, putative	Putative ABC-type amino acid transporter	amino-acid ABC transporter permease protein	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 cystine ABC tranporter, permease protein, putative	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 amino acid ABC transporter, permease protein	
ECOLI01870	D-cysteine desulfhydrase	Putative 1-aminocyclopropane-1-carboxylate deaminase	Putative 1-aminocyclopropane-1-carboxylate deaminase	Putative 1-aminocyclopropane-1-carboxylate deaminase	Putative 1-aminocyclopropane-1-carboxylate deaminase	D-cysteine desulfhydrase	Putative pyridoxal phosphate-dependent deaminase	1-aminocyclopropane-1-carboxylate deaminase	1-aminocyclopropane-1-carboxylate deaminase	Putative 1-aminocyclopropane-1-carboxylate deaminase	D-cysteine desulfhydrase	identified by match to protein family HMM PF00291; match to protein family HMM TIGR01275 pyridoxal phosphate-dependent deaminase, putative	Pyridoxal phosphate-dependent deaminase, putative	D-cysteine desulfhydrase	D-cysteine desulfhydrase	Residues 1 to 360 of 360 are 99 pct identical to residues 1 to 360 of a 360 aa protein from Escherichia coli K12 ref: NP_416429.1 putative 1-aminocyclopropane-1-carboxylate deaminase	D-cysteine desulfhydrase	IPR001926: Pyridoxal-5'-phosphate-dependent enzyme, beta family putative 1-cyclopropane-carboxylate deaminase	similar to Salmonella typhi CT18 putative deaminase putative deaminase	D-cysteine desulfhydrase	D-cysteine desulfhydrase	1-aminocyclopropane-1-carboxylate deaminase	identified by similarity to SP:P76316; match to protein family HMM PF00291; match to protein family HMM TIGR01275 D-cysteine desulfhydrase	identified by match to protein family HMM PF00291; match to protein family HMM TIGR01275 1-aminocyclopropane-1-carboxylate deaminase	Pyridoxal phosphate-dependent deaminase	Pyridoxal phosphate-dependent deaminase	Code: E; COG: COG2515 putative 1-aminocyclopropane-1-carboxylate deaminase	similar to gi|48860785|ref|ZP_00314694.1| [Microbulbifer degradans 2-40], percent identity 41 in 319 aa, BLASTP E(): 3e-54 putative 1-aminocyclopropane-1-carboxylate deaminase	Code: E; COG: COG2515 putative 1-aminocyclopropane-1-carboxylate deaminase	
ECOLI01871	Cystine-binding periplasmic protein	Cystine-binding periplasmic protein	ABC transporter, substrate binding component	Cystine-binding periplasmic protein precursor	Cystine ABC transporter, periplasmic cystine binding protein	Amino acid ABC transporter, periplasmic amino acid-binding protein	Putative periplasmic binding transport protein	similar to AL020958-15|CAA15882.1| percent identity: 40 in 227 aa glutamate periplasmic binding protein	Residues 20 to 285 of 285 are 99 pct identical to residues 1 to 266 of a 266 aa protein from Escherichia coli K12 ref: NP_416430.1 putative periplasmic binding transport protein	Putative cystine-binding periplasmic protein	Amino acid ABC transporter, periplasmic-binding protein	IPR001311: Solute-binding protein/glutamate receptor; IPR001638: Bacterial extracellular solute-binding protein, family 3 putative periplasmic binding transport protein	similar to Salmonella typhi CT18 cystine-binding periplasmic protein precursor cystine-binding periplasmic protein precursor	Putative cystine-binding periplasmic protein	Cysteine ABC transporter, periplasmic cysteine- binding protein, putative	FliY	identified by match to protein family HMM PF00497 cystine ABC transporter, periplasmic cystine binding protein	identified by match to protein family HMM PF00497 cystine ABC transporter, periplasmic cystine binding protein	extracellular solute-binding protein, family 3	extracellular solute-binding protein, family 3	Code: ET; COG: COG0834 putative periplasmic binding transport protein	Code: ET; COG: COG0834 putative periplasmic binding transport protein	extracellular solute-binding protein, family 3	ABC-type amino acid transport/signal transduction systems, periplasmic component/domain COG0834	Code: ET; COG: COG0834 putative periplasmic binding transport protein	Extracellular solute-binding protein, family 3 precursor	ABC transporter, substrate binding component identified by match to protein family HMM PF00497	Putative cystine-binding periplasmic protein precursor	Cystine-binding periplasmic protein	
ECOLI01872	Protein fliZ	FliZ protein	Putative alternative sigma factor regulatory protein	Putative uncharacterized protein fliZ	Residues 1 to 195 of 195 are 98 pct identical to residues 1 to 195 of a 195 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288382.1 orf, conserved hypothetical protein	Putative alternative sigma factor regulatory protein	FliZ protein	IPR000345: Cytochrome c heme-binding site putative regulator of FliA	similar to Salmonella typhi CT18 FliZ protein FliZ protein	Putative alternative sigma factor regulatory protein	Protein fliZ	conserved hypothetical protein	orf conserved hypothetical protein	FliZ protein	Putative alternative sigma factor regulatory protein	FliZ protein	Alternative sigma factor regulatory protein	Putative alternative sigma factor regulatory protein	conserved hypothetical protein	Alternative sigma factor regulatory protein	conserved hypothetical protein FliZ	Phage integrase domain protein SAM domain protein	Putative uncharacterized protein	FliZ protein	Integrase domain protein SAM domain protein	Predicted regulator of FliA activity	Protein FliZ	Integrase domain protein SAM domain protein	FliZ protein	
ECOLI01873	RNA polymerase sigma factor for flagellar operon	RNA polymerase sigma factor	similar to GB:M57464, GB:X15262, GB:X12949, GB:D00617, SP:P07949, PID:337356,  and PID:38275; identified by sequence similarity; putative RNA polymerase sigma factor, sigma-70 family	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor for flagellar operon	RNA polymerase sigma factor	RNA polymerase sigma-28 factor, putative	Polar Flagellar-specific RNA polymerase sigma factor FliA	RNA polymerase sigma factor	RNA polymerase sigma factor for flagellar operon	RNA polymerase sigma factor	RNA polymerase sigma factor	Putative flagellar-specific RNA polymerase sigma factor, FliA	Transcription initiation factor sigmaD protein	RNA polymerase sigma factor	RNA polymerase sigma factor for flagellar operon	RNA polymerase sigma factor, sigma-70 family	RNA polymerase sigma factor	RNA polymerase sigma factor for flagellar operon FliA	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor related to flagellar biosynthesis	PMID: 2507166 PMID: 94259284 best DB hits: BLAST: pir:S29615; whiG protein - Streptoverticillium griseocarneum -----; E=5e-44 gb:AAB41960.1; (U58281) sporulation sigma factor [Streptomyces; E=9e-44 prf:2013252A; RNA polymerase:SUBUNIT=sigma factor [Streptomyces; E=1e-43 COG: TP0709; COG1191 DNA-directed RNA polymerase specialized sigma; E=8e-41 fliA; COG1191 DNA-directed RNA polymerase specialized sigma subunit; E=2e-38 BS_sigD; COG1191 DNA-directed RNA polymerase specialized sigma; E=7e-34 PFAM: PF01399; PCI domain; E=0.026 PF00140; Sigma-70 factor; E=1.3e-59 RNA polymerase sigma factor whiG	RNA polymerase sigma factor	Motility sigma factor FliA	pseudo	
ECOLI01874	Flagellin	putative flagellin A	Flagellin E	Flagellin	CDS_ID OB2727 flagellin	flagelline	conserved gene flagellin	flagelline	identified by match to protein family HMM PF00669; match to protein family HMM PF00700 flagellin protein	identified by similarity to SP:P22252; match to protein family HMM PF00669; match to protein family HMM PF00700 flagellin subunit protein FlaB	InterProMatches:IPR001492, IPR001029; Biological Process: ciliary/flagellar motility (GO:0001539), Molecular Function: structural molecule activity (GO:0005198), Cellular Component: flagellar filament (sensu Bacteria) (GO:0009420), Biological Process: ciliary/flagellar motility (GO:0001539), M flagellin protein Hag	filament structural protein Flagellin	Flagellin B	Code: N; COG: COG1344 flagellin	flagellin-like	Flagellin and related hook-associated protein COG1344	Flagellin-like	flagellin and related hook-associated proteins	Flagellin Laf1	Flagellin and related hook-associated protein	flagellin B identified by match to protein family HMM PF00669; match to protein family HMM PF00700; match to protein family HMM PF07196	flagellin domain protein PFAM: flagellin domain protein; flagellin hook IN repeat protein KEGG: noc:Noc_2367 flagellin	hypothetical protein	flagellin domain protein PFAM: flagellin domain protein KEGG: bcn:Bcen_2866 flagellin-like	flagellin B (Q07910) Flagellin B (Flagellin N) High confidence in function and specificity	flagellin Flagellin. Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.  InterPro: Flagellin N-terminus, Flagellin C-terminus Pfam: Bacterial flagellin N-terminus, bacterial flagellin C-terminus no TMH no signal peptide High confidence in function and specificity	Flagellin domain protein	flagellin domain protein PFAM: flagellin domain protein KEGG: mta:Moth_0760 flagellin-like	flagellin identified by match to protein family HMM PF00669; match to protein family HMM PF00700	
ECOLI01875	Flagellar hook-associated protein 2	Flagellar protein	B-type flagellar hook-associated protein 2	Flagellar hook-associated protein 2	Flagellar hook associated protein 2	Putative flagellar hook-associated FliD	Related to flagellar hook-associated protein 2	Lmo0707 protein	Flagellar hook-associated protein 2	Flagellar hook-associated protein 2	Flagellar hook-associated protein	Flagellar hook associated protein	Flagellar hook-associated protein 2	identified by match to protein family HMM PF02465 flagellar hook-associated FliD, putative	Flagellar hook-associated protein 2, putative	Flagellar hook-associated protein 2	Flagellar hook-associated protein 2	Flagellar hook-associated protein FliD	Flagellar hook-associated protein 2	Flagellar hook-associated protein	Flagellar cap protein fliD	Flagellar hook-associated protein FliD	Flagellar hook-associated protein 2	flagellar hook-associated protein 2 (filament cap protein)	Flagellar hook-associated protein 2	Flagellar hook-associated protein 2	CDS_ID OB2501 flagellar hook-associated protein 2	Possible flagellar hook-associated protein 2	Flagellar hook-associated protein 2	
ECOLI01876	Flagellar protein fliS	B-type flagellar protein fliS	Flagellar protein FliS	Flagellin-specific chaperone FlaJ	Flagellar protein FliS	Flagellar protein FliS	Flagellar protein	putative polar flagellar protein FlaJ	Flagellar protein fliS	Flagellar protein fliS	Flagellar protein FliS	Flagellar protein FliS	Flagellar protein FliS	Flagellar protein	Flagellar protein	Flagellar protein fliS	Flagellar protein FliS	Flagellar protein FliS	flagellar biosynthesis	Flagellar protein FliS	Essential polar flagellar protein	Flagellar biosynthesis; repressor of class 3a and 3b operons	CDS_ID OB2500 flagellar protein	Flagellar protein	Flagellar protein	Flagellin-specific chaperone FlaJ	FliS	Residues 1 to 136 of 136 are 97 pct identical to residues 1 to 136 of a 136 aa protein from Escherichia coli O157:H7 ref: NP_310691.1 flagellar protein FliS	Flagellar protein FliS	
ECOLI01877	Flagellar protein fliT	Flagellar protein fliT	Flagellar protein fliT	Flagellar protein fliT	Residues 1 to 121 of 121 are 97 pct identical to residues 1 to 121 of a 121 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288387.1 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity)	Flagellar protein fliT	Flagellar protein fliT	flagellar biosynthesis; possible export chaperone for FliD	similar to Salmonella typhi CT18 flagellar protein FliT flagellar protein FliT	Flagellar protein fliT	Flagellar protein fliT	has RflA activity flagellar repressor of class 3a and 3b operons	Flagellar protein fliT	FliT	Flagellar protein fliT	FliT	Flagella protein	flagellar protein FliT	FliT	flagellar protein FliT	Flagellar export chaperone precursor	Putative uncharacterized protein	Flagellar protein FliT	Flagellar export chaperone	Predicted chaperone	Flagellar protein FliT	Flagellar protein FliT	Flagellar export chaperone	Flagellar protein FliT	
ECOLI01878	Cytoplasmic alpha-amylase	Alpha-amylase	Alpha-amylase	Cytoplasmic alpha-amylase	Alpha-amylase	Alpha-amylase	Cytoplasmic alpha-amylase	Alpha-amylase	alpha-amylase, putative	Intracellular alpha-amylase	Cytoplasmic alpha-amylase	Residues 1 to 495 of 495 are 98 pct identical to residues 1 to 495 of a 495 aa protein from Escherichia coli K12 ref: NP_416437.1 cytoplasmic alpha-amylase	alpha-amylase	InterProMatches:IPR006589; Molecular Function: alpha-amylase activity (GO:0004556), Biological Process: carbohydrate metabolism (GO:0005975) alpha amylase, Glycoside Hydrolase Family 13	Alpha-amylase	cytoplasmic alpha-amylase	similar to Salmonella typhi CT18 cytoplasmic alpha-amylase cytoplasmic alpha-amylase	Putative uncharacterized protein gbs0681	identified by match to PFAM protein family HMM PF00128 alpha amylase family protein	Alpha-amylase precursor	Similar to Bacillus amyloliquefaciens alpha-amylase precursor SWALL:AMY_BACAM (SWALL:P00692) (514 aa) fasta scores: E(): 2.5e-100, 50.51% id in 483 aa, and to Bacillus megaterium alpha-amylase SWALL:Q9AQ54 (EMBL:AF220440) (533 aa) fasta scores: E(): 5.7e-105, 51.24% id in 484 aa putative alpha-amylase precursor	alpha-amylase	Cytoplasmic alpha-amylase	alpha-amylase (amyE)	Alpha-amylase	identified by match to protein family HMM PF00128 alpha amylase family protein	Code: G; COG: COG0366 cytoplasmic alpha-amylase	Code: G; COG: COG0366 cytoplasmic alpha-amylase	Code: G; COG: COG0366 cytoplasmic alpha-amylase	
ECOLI01879	Uncharacterized lipoprotein yedD	Hypothetical lipoprotein yedD	Putative uncharacterized protein yedD	Residues 2 to 138 of 138 are 99 pct identical to residues 1 to 137 of a 137 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288389.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Uncharacterized lipoprotein yedD	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical lipoprotein YedD	Hypothetical lipoprotein YedD	conserved hypothetical protein	conserved hypothetical protein	Putative outer membrane lipoprotein precursor	Putative uncharacterized protein yedD	Putative uncharacterized protein	Putative lipoprotein	Predicted protein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative outer membrane lipoprotein	Putative lipoprotein	
ECOLI01880	UPF0394 inner membrane protein yedE	Putative uncharacterized protein TVG1016719	Conserved hypothetical membrane protein	Putative uncharacterized protein	Putative integral membrane protein	Putative membrane protein	Hypothetical protein yedE	Putative uncharacterized protein	Putative transport system permease protein	Residues 1 to 391 of 391 are 99 pct identical to residues 11 to 401 of a 401 aa protein from Escherichia coli K12 ref: NP_416439.1 putative transport system permease protein	Putative integral membrane protein	Putative uncharacterized protein	identified by similarity to SP:P31064; match to protein family HMM PF04143 membrane protein, putative	paral putative membrane component of transport system	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Putative integral membrane protein	UPF0394 inner membrane protein yedE	Code: R; COG: COG2391 putative transport system permease protein	identified by similarity to SP:P31064; match to protein family HMM PF04143 putative membrane protein	Code: R; COG: COG2391 putative transport system permease protein	Putative uncharacterized protein	Code: R; COG: COG2391 putative transport system permease protein	Putative uncharacterized protein	Hypothetical protein	Putative integral membrane protein	Putative uncharacterized protein yedE	inner membrane protein YedE identified by match to protein family HMM PF04143	protein of unknown function DUF395, YeeE/YedE PFAM: protein of unknown function DUF395, YeeE/YedE KEGG: neu:NE2034 hypothetical protein	
ECOLI01881	UPF0033 protein yedF	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	UPF0033 protein TM_0983	UPF0033 protein yedF	UPF0033 protein yedF	Putative uncharacterized protein	UPF0033 protein yedF	Predicted Transcriptional regulator	Residues 1 to 77 of 77 are 100 pct identical to residues 1 to 77 of a 77 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288391.1 orf, conserved hypothetical protein	Predicted redox protein, regulator of disulfide bond formation	Uncharacterized protein family UPF0033	identified by similarity to OMNI:SO0109; match to protein family HMM PF01206 conserved hypothetical protein	IPR001455: Protein of unknown function UPF0033 Hypothetical protein yedF	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved protein	UPF0033 protein yedF	Code: O; COG: COG0425 conserved hypothetical protein	identified by similarity to GB:AAP77896.1; match to protein family HMM PF01206 conserved hypothetical protein	Code: O; COG: COG0425 conserved hypothetical protein	SirA-like	Code: O; COG: COG0425; orf conserved hypothetical protein	Putative uncharacterized protein	SirA family protein	Hypothetical protein	Putative uncharacterized protein yedF	
ECOLI01882	Uncharacterized protein yedK	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein	Hypothetical protein yedK	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein yedK	identified by similarity to PIR:AC2205 conserved hypothetical protein	Putative uncharacterized protein	Mb3255c, -, len: 252 aa. Equivalent to Rv3226c, len: 252 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 252 aa overlap). Conserved hypothetical protein, similar to various hypothetical bacterial proteins e.g. Q9CCI2|ML0793 PUTATIVE BACTERIOPHAGE PROTEIN from Mycobacterium leprae (252 aa), FASTA scores: opt: 1183, E(): 3.8e-68, (70.65% identity in 252 aa overlap); BAB54183|MLR7795 HYPOTHETICAL PROTEIN from Rhizobium loti (Mesorhizobium loti) (369 aa), FASTA scores: opt: 417, E(): 2.9e-19, (33.75% identity in 252 aa overlap); O64131 YOQW PROTEIN from Bacteriophage SPBc2 (224 aa), FASTA scores: opt: 413, E(): 3.4e-19, (38.5% identity in 244 aa overlap); O31916 YOQW PROTEIN from Bacillus subtilis (224 aa), FASTA scores: opt: 413, E(): 3.4e-19, (38.5% identity in 244 aa overlap); O34906 YOAM PROTEIN from Bacillus subtilis (227 aa), FASTA scores: opt: 401, E(): 2e-18, (37.7% identity in 244 aa overlap); Q9K4A5|SC7E4.11 HYPOTHETICAL 30.8 KDA PROTEIN from Streptomyces coelicolor (271 aa), FASTA scores: opt: 383, E(): 3.3e-17, (39.6% identity in 283 aa overlap); etc. CONSERVED HYPOTHETICAL PROTEIN	Gifsy-2 prophage YedK	Putative uncharacterized protein	Gifsy-2 prophage protein	conserved hypothetical protein	This gene assignment is based partly on a multiple alignment of the best pairwise matches; identified by similarity to OMNI:NTL01NS3189; match to protein family HMM PF02586 conserved hypothetical protein	hypothetical protein	Putative uncharacterized protein	Code: S; COG: COG2135 conserved hypothetical protein	Putative uncharacterized protein	COG2135.1, COG2135, Conserved, (conservation is not high 33% AA ID at best) amongst wide group of bacteria.  Citation: Entrez protein entry ZP_00066707 conserved hypothetical protein	Code: S; COG: COG2135 conserved hypothetical protein	Protein of unknown function DUF159	Code: S; COG: COG2135; orf conserved hypothetical protein	protein of unknown function DUF159 PFAM: protein of unknown function DUF159: (2e-25) KEGG: rsp:RSP_2605 hypothetical protein, ev=4e-30, 35% identity	Putative uncharacterized protein	Protein of unknown function DUF159	Hypothetical protein	conserved hypothetical protein	
ECOLI01883	Uncharacterized N-acetyltransferase yedL	Acetyltransferase, GNAT family	Histone acetyltransferase HPA2	Acetyltransferase, GNAT family	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ACETYLTRANSFERASE PROTEIN	Putative acetyltransferase	acetyl transferase	Acetyltransferase	Histone acetyltransferase HPA2	acetyltransferase, GNAT family	Probable acetyltransferase	Acetyltransferase protein	acetyltransferase, GNAT family	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	acetyltransferase	putative acetyltransferase, GNAT family	GCN5-related N-acetyltransferase	GCN5-related N-acetyltransferase	Histone acetyltransferase HPA2/related acetyltransferase COG0454	GCN5-related N-acetyltransferase	GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase: (9.9e-16) KEGG: vvu:VV20941 histone acetyltransferase HPA2, ev=4e-25, 44% identity	GCN5-related N-acetyltransferase	GCN5-related N-acetyltransferase	acetyltransferase-like	GCN5-related N-acetyltransferase	Acetyltransferase, GNAT family	GCN5-related N-acetyltransferase	acetyltransferase, GNAT family protein COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	GCN5-related N-acetyltransferase	


ECOLI01886	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body protein FliE	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body complex protein	Putative flagellar hook-basal body protein	FliE protein	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body complex protein FliE	Flagellar hook-basal body complex protein FliE	Flagellar hook-basal body complex protein FliE	Flagellar hook-basal body complex protein FliE	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body complex protein FliE	flagellar hook-basal body protein	Flagellar hook-basal body complex protein FliE, putative	Flagellar hook-basal body complex protein FliE	Flagellar hook-basal body complex protein fliE	CDS_ID OB1554 flagellar hook-basal body protein	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body protein	Flagellar hook-basal body protein	Residues 11 to 114 of 114 are 99 pct identical to residues 1 to 104 of a 104 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288398.1 flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction	Flagellar hook-basal body complex protein fliE	Flagellar hook-basal body complex protein fliE	FliE protein	
ECOLI01887	Flagellar M-ring protein	Flagellar M-ring protein FliF	Flagellar protein	Flagellar M-ring protein	Flagellar M-ring protein	Flagellar M-ring protein	Flagellar M-ring protein	Flagellar M-ring protein	Polar flagellar M-ring protein FliF	Flagellar MS-ring protein	Flagellar basal-body M-ring protein	Related to flagellar M-ring protein	Flagellar M-ring protein fliF	Flagellar M-ring protein	Flagellar M-ring protein	Flagellar M-ring protein	Flagellar M-ring protein	Flagellar M-ring protein	identified by similarity to SP:P23447; match to protein family HMM PF01514 flagellar M-ring protein	Flagellar M-ring protein FliF	Flagellar M-ring protein FliF	Flagellar M-ring protein	Flagellar M-ring protein	Flagellar M-ring protein	Flagellar M-ring protein	Flagellar M-ring protein fliF	Flagellar M-ring protein FliF	pseudo	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF	
ECOLI01888	Flagellar motor switch protein fliG	Flagellar motor switch protein FliG	Flagellar protein	Flagellar motor switch protein fliG	Flagellar motor switch protein fliG	Flagellar motor switch protein fliG	Flagellar motor switch protein	Flagellar motor switch protein fliG	Flagellar motor switch protein FliG	Flagellar motor switch protein FliG	Flagellar motor switch protein fliG	Flagellar motor switch protein FliG	Related to flagellar motor switch protein	Lmo0714 protein	Flagellar motor switch protein fliG	Flagellar motor switch protein fliG	Flagellar motor switch protein	putative polar flagellar motor switch protein	Flagellar motor switch protein fliG	FliG protein	Flagellar motor switch protein fliG	identified by match to protein family HMM PF01706; match to protein family HMM TIGR00207 flagellar motor switch protein FliG	Flagellar motor switch protein FliG	Flagellar motor switch protein fliG	Flagellar motor switch protein FliG	Flagellar motor switch protein FliG	Flagellar motor switch protein FliG	Flagellar motor switch protein	Flagellar motor switch protein	
ECOLI01889	Flagellar assembly protein fliH	Polar flagellar assembly protein FliH	Flagellar assembly protein FliH	Flagellar assembly protein	Hypothetical polar flagellar assembly protein, FliH	Flagellar assembly protein fliH	Flagellar assembly protein FliH, putative	Flagellar assembly protein FliH	Flagellar assembly protein FliH	Flagellar assembly protein	Flagellar assembly protein fliH	Flagellar assembly protein Flih, putative	Flagellar assembly protein FliH	Flagellar assembly protein FliH	Flagellar biosynthesis; export of flagellar proteins	Flagellar assembly protein fliH	Polar flagellar assembly protein	Residues 1 to 235 of 235 are 98 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288401.1 flagellar biosynthesis; export of flagellar proteins?	Flagellar assembly protein FliH	Flagellar assembly protein FliH	FliH protein	Probable flagellar assembly protein flih	Flagellar assembly protein FliH	conserved gene flagellar assembly protein FliH	Polar flagellar assembly protein FliH	IPR000563: Flagellar assembly protein FliH flagellar biosynthesis; possible export of flagellar proteins	similar to Salmonella typhi CT18 flagellar assembly protein FliH flagellar assembly protein FliH	Flagellar assembly protein FliH	flagellar assembly protein FliH	
ECOLI01890	Flagellum-specific ATP synthase	Flagellum-specific ATP synthase FliI	Flagellar protein	Flagellum-specific ATP synthase	Flagellum-specific ATP synthase	Flagellum-specific ATP synthase	Flagellum-specific ATP synthase	Polar flagellum-specific ATP synthase FliI	Flagellum-specific ATP synthase fliI	Flagellum-specific ATP synthase	Putative flagellum-specific ATP synthase	Lmo0716 protein	Flagellum-specific ATP synthase	Flagellum-specific ATP synthase	Flagellum-specific ATP synthase	putative polar flagellum-specific ATP synthase FliI	Flagellum-specific ATP synthase	Flagellum-specific ATP synthase	Flagellum-specific ATP synthase	identified by match to protein family HMM PF00006; match to protein family HMM TIGR01026 flagellum-specific ATP synthase, putative	Flagellum-specific ATP synthase FliI	Flagellum-specific ATP synthase FliI	Flagellum-specific ATP synthase FliI	Flagellum-specific ATP synthase FliI	Flagellum-specific ATP synthase FliI	Flagellum-specific ATP synthase	Flagellum-specific ATP synthase	PMID: 1828465 best DB hits: BLAST: pir:D72404; flagellum-specific ATP synthase - Thermotoga maritima; E=1e-108 ddbj:BAB06174.1; (AP001515) flagellar-specific ATP synthase; E=1e-106 swissprot:P23445; FLII_BACSU FLAGELLUM-SPECIFIC ATP SYNTHASE; E=1e-103 COG: TM0218; COG1157 Flagellar biosynthesis/type III secretory pathway; E=1e-109 atpD; COG0055 F0F1-type ATP synthase beta subunit; E=2e-37 PFAM: PF00005; ABC transporter; E=0.024 PF00006; ATP synthase alpha/beta family,; E=4e-131 flagellum-specific ATP synthase	predicted by Codon_usage predicted by Homology predicted by FrameD FLAGELLUM-SPECIFIC ATP SYNTHASE PROTEIN	
ECOLI01891	Flagellar fliJ protein	Flagellar biosynthesis chaperone FliJ	Flagellar fliJ protein	Flagellar fliJ protein	putative flagellar protein FliJ	Flagellar fliJ protein	Flagellar protein FliJ, putative	Flagellar protein FliJ	Flagellar protein FliJ	Flagellar protein FliJ	Flagellar protein	Flagellar fliJ protein	Flagellar protein FliJ, putative	Flagellar protein FliJ	Flagellar FliJ protein	Polar flagellar assembly protein FliJ	Flagellar fliJ protein	Polar flagellar assembly protein	Residues 2 to 114 of 114 are 100 pct identical to residues 35 to 147 of a 147 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288403.1 flagellar fliJ protein	Flagellar protein FliJ	Flagellar FliJ protein	FliJ protein	Probable flagellar protein	Flagellar protein FliJ	Probable flagellar protein FliJ	IPR000809: Flagellar FliJ protein flagellar fliJ protein	similar to Salmonella typhi CT18 flagellar FliJ protein flagellar FliJ protein	Flagellar protein FliJ	flagellar FliJ protein	
ECOLI01892	Flagellar hook-length control protein	Flagellar hook-length control protein	Flagellar hook-length control protein	Flagellar hook-length control protein FliK	Flagellar hook-length control protein	Flagellar hook-length control protein	Possible flagellar hook length determination protein	Residues 1 to 375 of 375 are 97 pct identical to residues 1 to 375 of a 375 aa protein from Escherichia coli K12 ref: NP_416453.1 flagellar hook-length control protein	Possible flagellar hook-length control protein	IPR001635: Flagellar hook-length control protein flagellar hook-length control protein	similar to Salmonella typhi CT18 flagellar hook-length control protein flagellar hook-length control protein	Flagellar protein	Flagellar hook-length control protein	identified by match to protein family HMM PF02120 flagellar hook-length control protein FliK	identified by match to protein family HMM PF02120 flagellar hook-length control protein FliK	Code: N; COG: COG3144 flagellar hook-length control protein	flagellar hook-length control protein	Flagellar hook-length control protein	Flagellar hook-length control protein COG3144	Flagellar hook-length control protein	Flagellar hook-length control protein	putative flagellar hook-length control protein FliK Flagellar hook-length control protein. Controls the length of the flagellar hook. no TMHs no signal peptide Family membership	flagellar hook-length control protein PFAM: flagellar hook-length control protein KEGG: rpc:RPC_0986 flagellar hook-length control protein	flagellar hook-length control protein Code: N; COG: COG3144	flagellar hook-length control protein	FliK	Flagellar hook-length control protein	Flagellar hook-length control protein	Putative uncharacterized protein	
ECOLI01893	Flagellar fliL protein	Flagellar basal body-associated protein FliL	Flagellar fliL protein	Flagellar protein	Flagellar protein FliL	Flagellar fliL protein	Residues 1 to 154 of 154 are 100 pct identical to residues 1 to 154 of a 154 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288405.1 flagellar biosynthesis	Flagellar protein FliL	Putative flagellar fliL transmembrane protein	Probable flagellar flil transmembrane protein	Flagellar protein FliL	Flagellar fliL transmembrane protein	flagellar biosynthesis	similar to Salmonella typhi CT18 FliL protein FliL protein	Flagellar protein FliL	Flagellar fliL protein	Flagellar basal body-associated protein FliL	Code: N; COG: COG1580 flagellar biosynthesis	Code: N; COG: COG1580 flagellar biosynthesis	probable flagellar transmembrane protein FliL	Flagellar basal body-associated protein FliL	flagellar basal body-associated protein FliL	Flagellar basal body-associated protein FliL	Flagellar basal body-associated protein FliL precursor	Flagellar basal body-associated protein FliL identified by match to protein family HMM PF03748	Flagellar FliL protein	Flagellar protein FliL	flagellar basal body-associated protein FliL	flagellar basal body-associated protein FliL	
ECOLI01894	Flagellar motor switch protein fliM	Flagellar motor switch protein FliM	Flagellar protein	Flagellar motor switch protein fliM	Flagellar motor switch protein	Flagellar motor switch protein FliM	Flagellar motor switch protein FliM	Flagellar motor switch protein fliM	Flagellar motor switch protein FliM	Related to flagellar motor switch protein	Flagellar motor switch protein fliM	Flagellar motor switch protein	Flagellar motor switch protein FliM	Putative flagellar motor switch protein FliM	Flagellar motor switch protein fliM	Flagellar motor switch protein FliM	Flagellar motor switch protein fliM	identified by match to protein family HMM PF01052; match to protein family HMM PF02154 flagellar motor switch protein FliM	Flagellar motor switch protein FliM	Flagellar motor switch protein FliM	Flagellar motor switch protein FliM	Flagellar motor switch protein FliM	Flagellar motor switch protein FliM	Flagellar motor switch protein fliM	Flagellar motor switch protein	Flagellar motor switch protein	PMID: 96345631 PMID: 8755894 best DB hits: BLAST: swissprot:P74927; FLIM_TREPA FLAGELLAR MOTOR SWITCH PROTEIN FLIM; E=7e-47 swissprot:Q57511; FLIM_BORBU FLAGELLAR MOTOR SWITCH PROTEIN FLIM; E=5e-46 ddbj:BAB06165.1; (AP001515) flagellar motor switch protein; E=3e-44 COG: TP0721; COG1868 Flagellar motor switch protein; E=7e-48 PFAM: PF02154; Flagellar motor switch protein FliM; E=1.3e-68 PF01052; Surface presentation of antigens (S; E=0.19 flagellar motor switch protein fliM	Flagellar motor switch protein fliM	Flagellar motor switch protein fliM	
ECOLI01895	Flagellar motor switch protein fliN	Probable flagellar motor switch protein	Probable flagellar motor switch protein	putative flagellar motor switch protein	Flagellar motor switch protein fliN	identified by match to protein family HMM PF01052 flagellar motor switch protein, putative	Flagellar motor switch protein FliN	Flagellar motor switch protein	Flagellar motor switch protein flin	Flagellar motor switch protein	pseudo	Flagellar motor switch protein FliN	Flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction	Residues 1 to 137 of 137 are 99 pct identical to residues 1 to 137 of a 137 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288407.1 flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction	Flagellar motor switch protein FliN	Possible flagellar motor switch FliN	FliN protein	Flagellar motor switch protein FliN	Flagellar motor switch protein	IPR001172: Flagellar motor switch FliN protein flagellar biosynthesis, component of motor switch and energizing	similar to Salmonella typhi CT18 flagellar motor switch protein FliN flagellar motor switch protein FliN	Flagellar motor switch protein FliN	flagellar motor switch protein FliN	Flagellar motor switch protein fliN	Flagellar motor switch protein FliN	identified by similarity to SP:P15070; match to protein family HMM PF01052; match to protein family HMM TIGR02480 flagellar motor switch protein FliN	identified by similarity to SP:P15070; match to protein family HMM PF01052; match to protein family HMM TIGR02480 flagellar motor switch protein FliN	Type III secretion system outer membrane O protein	Type III secretion system outer membrane O protein	
ECOLI01896	Flagellar protein fliO	Flagellar biogenesis protein FliO	Flagellar protein fliO	Flagellar protein fliO	Flagellar protein FliO	Flagellar protein FliO	Flagellar protein FliO	Flagellar protein FliO	Flagellar protein	Flagellar protein FliO	Polar flagellar assembly protein FliO	Flagelar biosynthesis	Polar flagellar assembly protein	Residues 1 to 101 of 101 are 99 pct identical to residues 21 to 121 of a 121 aa protein FLIO_ECOLI sp: P22586 FLAGELLAR PROTEIN FLIO	Flagellar protein FliO	Flagellar FliO protein	Probable Flagellar protein FliO	flagellar biosynthesis	similar to Salmonella typhi CT18 flagellar protein FliO flagellar protein FliO	Possible flagellar protein FliO	flagellar protein FliO	Flagellar protein fliO	identified by similarity to SP:Q51467; match to protein family HMM PF04347 flagellar protein FliO	identified by similarity to SP:Q51467; match to protein family HMM PF04347 flagellar protein FliO	Flagellar biosynthesis protein, FliO	Code: N; COG: COG3190 flagellar biosynthesis	Flagellar biosynthesis protein, FliO	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 8282695, 7622217; Product type s : structural protein putative flagellar protein	Code: N; COG: COG3190 flagellar biosynthesis	
ECOLI01897	Flagellar biosynthetic protein fliP	Flagellar biosynthetic protein FliP	Flagellar biosynthetic protein	Flagellar biosynthetic protein fliP	Flagellar biosynthetic protein fliP	Flagellar biosynthetic protein fliP	Flagellar biosynthesis protein	Flagellar biosynthesis protein FliP	Flagellar biosynthesis pathway, component FliP	Flagellar biosynthesis protein	Flagellar biosynthetic protein FliP	Putative flagellar biosynthetic protein FliP	Probable flagellar biosynthetic protein	Lmo0676 protein	Flagellar biosynthetic protein fliP	Flagellar biosynthetic protein FliP	Flagellar biosynthetic protein	Putative polar flagellar assembly protein, FliP	Flagellar biosynthetic protein fliP	Flagellar protein required for flagellar formation	Flagellar biosynthetic protein fliP	identified by match to protein family HMM PF00813 flagellar biosynthetic protein FliP, putative	identified by match to TIGR protein family HMM TIGR01102 flagellar biosynthetic protein FliP	Flagellar biosynthetic protein fliP	Flagellar biosynthetic protein FliP	Flagellar biosynthetic protein FliP	Flagellar biosynthetic protein FliP	Flagellar biosynthetic protein FliP	Flagellar biosynthetic protein fliP	
ECOLI01898	Flagellar biosynthetic protein fliQ	Flagellar biosynthetic protein FliQ	Flagellar biosynthesis	Flagellar biosynthetic protein fliQ	Flagellar biosynthetic protein fliQ	Flagellar biosynthetic protein	Flagellar biosynthesis protein FliQ	Flagellar biosynthetic protein fliQ	Putative flagellar biosynthetic protein FliQ	Probable flagellar biosynthetic protein	Lmo0677 protein	Flagellar biosynthetic protein fliQ	Flagellar biosynthetic protein FliQ	Flagellar biosynthetic protein	putative flagellar biosynthetic protein	Flagellar biosynthetic protein fliQ	Flagellar biosynthetic protein FliQ	Flagellar biosynthetic protein fliQ	flagellar biosynthetic protein FliQ, putative	similar to GP:15073615, GB:M61872, SP:Q03936, and PID:184442; identified by sequence similarity; putative flagellar biosynthesis protein FliQ	Flagellar biosynthetic protein FliQ	Flagellar biosynthetic protein FliQ	Flagellar biosynthetic protein FliQ	Flagellar biosynthetic protein fliQ	Flagellar biosynthetic protein	Flagellar biosynthetic protein	PMID: 1597417 best DB hits: BLAST: swissprot:P74891; SSAS_SALTY SECRETION SYSTEM APPARATUS PROTEIN; E=3e-04 pir:H81264; flagellar biosynthetic protein Cj1675 [imported] -; E=6e-04 swissprot:P35535; FLIQ_BACSU FLAGELLAR BIOSYNTHETIC PROTEIN FLIQ; E=7e-04 COG: Cj1675; COG1987 Flagellar biosynthesis/type III secretory pathway; E=6e-05 PFAM: PF01313; Bacterial export proteins, famil; E=4.1e-26 probable flagellar biosynthetic protein fliQ	Flagellar biosynthetic protein fliQ	Flagellar biosynthetic protein FliQ	
ECOLI01899	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein FliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein	Flagellar biosynthetic protein fliR	putative polar flagellar assembly protein FliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	identified by match to protein family HMM PF01311 flagellar biosynthetic protein FliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein FliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein	PMID: 9683497 best DB hits: BLAST: gb:AAC32324.1; (AF044580) flagellar protein FliR [Rhodobacter; E=1e-14 pir:B83465; flagellar biosynthetic protein FliR PA1448 [imported] -; E=2e-13 pir:E81323; flagellar biosynthetic protein Cj1179c [imported] -; E=4e-12 COG: PA1448; COG1684 Flagellar biosynthesis/type III secretory pathway; E=2e-14 PFAM: PF01311; Bacterial export proteins, fami; E=7.9e-32 probable flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	Flagellar biosynthetic protein fliR	
ECOLI01900	Colanic acid capsular biosynthesis activation protein A	Colanic acid capsular biosynthesis activation protein A	Colanic acid capsular biosynthesis activation protein A	Residues 1 to 207 of 207 are 99 pct identical to residues 1 to 207 of a 207 aa protein from Escherichia coli pir: A43311 regulator of K30 antigen expression rcsA	IPR000792: Bacterial regulatory protein, LuxR family positive transcriptional regulator of capsular/exo-polysaccharide synthesis (LuxR/UhpA family)	similar to Salmonella typhi CT18 colanic acid capsullar biosynthesis activation protein A colanic acid capsullar biosynthesis activation protein A	Colanic acid capsular biosynthesis activation protein A	positive transcription factor; Code: K; COG: COG2771 positive regulator for ctr capsule biosynthesis	Code: K; COG: COG2771 positive regulator for ctr capsule biosynthesis, positive transcription factor	colanic acid capsular biosynthesis activation protein A	Colanic acid capsular biosynthesis activation protein A	Positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression, subunit of RcsB transcriptional activator	Colanic acid capsular biosynthesis activation protein A Code: K; COG: COG2771	positive regulator for ctr capsule biosynthesis, positive transcription factor	Response regulator receiver protein	Positive regulator for ctr capsule biosynthesis, positive transcription factor	Putative uncharacterized protein	Colanic acid capsular biosynthesis activation protein A	Transcriptional regulator, LuxR family	DNA-binding transcriptional activator, co- regulator with RcsB	Colanic acid capsular biosynthesis activation protein A	Transcriptional regulator, LuxR family	Colanic acid capsular biosynthesis activation protein A	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Colanic acid capsular biosynthesis activation protein A	Colanic acid capsular biosynthesis activation protein A	Colanic acid capsullar biosynthesis activation protein A	
ECOLI01901	Protein dsrB	Protein dsrB	Protein dsrB	Protein dsrB	Residues 21 to 82 of 82 are 98 pct identical to residues 1 to 62 of a 62 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288413.1 orf, conserved hypothetical protein	Protein dsrB	DsrB protein	similar to Salmonella typhi Ty2 DsrB protein DsrB protein	Protein dsrB	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Protein dsrB	Hypothetical protein	Protein dsrB	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Protein dsrB	Putative uncharacterized protein dsrB	Putative uncharacterized protein	Protein dsrB	Putative uncharacterized protein	Predicted protein	Protein dsrB	Protein dsrB	Protein dsrB	
ECOLI01902	Uncharacterized protein yodD	Hypothetical protein yodD	Putative uncharacterized protein	Residues 1 to 80 of 80 are 97 pct identical to residues 1 to 80 of a 80 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288414.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yodD	conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yodD	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yodD	Putative uncharacterized protein	
ECOLI01904	Cellulose synthesis regulatory protein	Cellulose synthesis regulatory protein	Cellulose synthesis regulatory protein	Residues 1 to 494 of 494 are 98 pct identical to residues 71 to 564 of a 564 aa protein from Escherichia coli dbj: BAA15784.1 orf, conserved hypothetical protein	IPR000160: GGDEF putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Cellulose synthesis regulatory protein	GGDEF	Code: T; COG: COG2199 conserved hypothetical protein	Code: T; COG: COG2199; orf conserved hypothetical protein	Putative uncharacterized protein	Cellulose synthesis regulatory protein	conserved hypothetical protein	conserved hypothetical protein	Diguanylate cyclase	Putative uncharacterized protein yedQ	Putative uncharacterized protein	Diguanylate cyclase	Predicted diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase (GGDEF) domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative diguanylate cyclase (GGDEF) domain	Putative uncharacterized protein	Diguanylate cyclase (GGDEF) domain protein	Putative membrane protein	Cellulose synthesis regulatory protein	Cellulose synthesis regulatory protein	
ECOLI01903	Putative mannosyl-3-phosphoglycerate phosphatase	Putative uncharacterized protein	Mannosyl-3-phosphoglycerate phosphatase	Mannosyl-3-phosphoglycerate phosphatase	Putative uncharacterized protein	Mannosyl-3-phosphoglycerate phosphatase	Putative mannosyl-3-phosphoglycerate phosphatase	Putative mannosyl-3-phosphoglycerate phosphatase	Putative uncharacterized protein	Putative mannosyl-3-phosphoglycerate phosphatase	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1788265 (272 aa). BLAST with identity of 96% in 272 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Predicted hydrolase, HAD superfamily	Mannosyl-3-phosphoglycerate phosphatase	IPR000150: Cof protein putative hydrolase of the HAD superfamily	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative mannosyl-3-phosphoglycerate phosphatase	identified by match to protein family HMM TIGR01484; match to protein family HMM TIGR01486 HAD-superfamily hydrolase, subfamily IIB	HAD-superfamily hydrolase subfamily IIB:HAD- superfamily hydrolase YedP	Code: R; COG: COG3769 conserved hypothetical protein	Code: R; COG: COG3769 conserved hypothetical protein	HAD-superfamily hydrolase YedP	mannosyl-3-phosphoglycerate phosphatase family protein	mannosyl-3-phosphoglycerate phosphatase family protein identified by match to protein family HMM TIGR01484; match to protein family HMM TIGR02461; match to protein family HMM TIGR02463	HAD-superfamily hydrolase YedP	HAD-superfamily hydrolase YedP	predicted hydrolase (HAD superfamily) COG3769	Code: R; COG: COG3769; orf conserved hypothetical protein	HAD-superfamily hydrolase YedP TIGRFAM: HAD-superfamily hydrolase subfamily IIB: (1.1e-12) HAD-superfamily hydrolase YedP: (8.4e-36) PFAM: sucrose-6F-phosphate phosphohydrolase: (0.0013) Haloacid dehalogenase-like hydrolase, type 3: (6.1e-05) KEGG: eca:ECA2248 putative mannosyl-3-phosphoglycerate phosphatase, ev=3e-33, 36% identity	Putative mannosyl-3-phosphoglycerate phosphatase	
ECOLI01905	Uncharacterized protein yodC	Hypothetical protein yodC	Uncharacterized protein yodC	Residues 1 to 60 of 60 are 98 pct identical to residues 1 to 60 of a 60 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288417.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	Code: S; COG: COG5475 conserved hypothetical protein	Code: S; COG: COG5475 conserved hypothetical protein	Code: S; COG: COG5475; orf conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yodC	
ECOLI01906	Inner membrane protein yedI	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Putative uncharacterized protein	pseudo	Uncharacterized BCR	Hypothetical protein yedI	similar to GB:Z29635, SP:P46374, PID:455002, GB:Z29635, SP:P46374, and PID:455002; identified by sequence similarity; putative membrane protein, putative	Putative uncharacterized protein	Putative uncharacterized protein	Membrane protein, putative	Hypothetical Membrane Spanning Protein	Putative uncharacterized protein VPA0406	Putative ABC transport system membrane protein	Putative uncharacterized protein yedI	similar to AE004611-11|AAG05246.1| percent identity: 38 in 315 aa conserved hypothetical protein	Putative uncharacterized protein	Residues 1 to 305 of 305 are 99 pct identical to residues 1 to 305 of a 305 aa protein from Escherichia coli O157:H7 ref: NP_310723.1 putative methyl-independent mismatch repair protein	similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	similar to conserved hypothetical protein hypothetical protein	identified by similarity to PIR:H75411; match to protein family HMM PF05661 conserved hypothetical protein	PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN	Mb3119c, -, len: 306 aa. Equivalent to Rv3092c, len: 306 aa, from Mycobacterium tuberculosis strain H37Rv, (99.7% identity in 306 aa overlap). Probable conserved integral membrane protein, highly similar to Q9RUT5|DR1297 CONSERVED HYPOTHETICAL PROTEIN from Deinococcus radiodurans (311 aa), FASTA scores: opt: 941, E(): 9.8e-51, (55.65% identity in 309 aa overlap); Q9A8B8|CC1436 HYPOTHETICAL PROTEIN from Caulobacter crescentus (314 aa), FASTA scores: opt: 791, E(): 1.6e-41, (46.9% identity in 305 aa overlap); and also highly similar to Q9I2N8|PA1857 HYPOTHETICAL PROTEIN from Pseudomonas aeruginosa (307 aa), FASTA scores: opt: 373, E(): 8.1e-16, (40.8% identity in 321 aa overlap); BAB36119|ECS2696 PUTATIVE METHYL-INDEPENDENT MISMATCH REPAIR PROTEIN from Escherichia coli strain O157:H7 (305 aa), FASTA scores: opt: 335, E(): 1.7e-13, (39.75% identity in 307 aa overlap). PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	similar to Salmonella typhimurium putative inner membrane protein putative inner membrane protein	similar to BRA0455, membrane protein, hypothetical hypothetical membrane protein	Putative uncharacterized protein	
ECOLI01908	Very short patch repair protein	Patch repair protein	Patch repair protein	Putative very-short-patch-repair endonuclease	Very short patch repair protein	DNA mismatch endonuclease Vsr, putative	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DNA MISMATCH ENDONUCLEASE, PATCH REPAIR PROTEIN	DNA mismatch endonuclease, patch repair protein	CDS_ID OB3341 very-short-patch-repair endonuclease	Putative patch repair protein	Residues 1 to 156 of 156 are 98 pct identical to residues 1 to 156 of a 156 aa protein from Escherichia coli K12 ref: NP_416469.1 DNA mismatch endonuclease, patch repair protein	Probable patch repair protein	Very short patch repair protein	Similar to very-short-patch-repair endonuclease vsr hypothetical protein	Similar to DNA mismatch repair endonuclease hypothetical protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark XorII very-short-patch-repair endonuclease	IPR004603: DNA mismatch endonuclease vsr DNA mismatch endonuclease, patch repair protein	similar to Salmonella typhi CT18 patch repair protein patch repair protein	Patch repair protein	Putative DNA mismatch endonuclease Vsr	DNA mismatch endonuclease, patch repair protein	DNA mismatch endonuclease	very short patch repair protein (DNA mismatch endonuclease)	Best Blastp Hit: pir||H81959 patch repair protein (EC 3.1.-.-) NMA0429 [imported] - Neisseria meningitidis (group A strain Z2491) >gi|7379179|emb|CAB83728.1| (AL162753) patch repair protein [Neisseria meningitidis] putative DNA mismatch endonuclease, patch repair protein	patch repair protein; Code: L; COG: COG3727 DNA mismatch endonuclease	patch repair protein	patch repair protein; Code: L; COG: COG3727 DNA mismatch endonuclease	DNA mismatch endonuclease vsr	DNA mismatch endonuclease	
ECOLI01907	Uncharacterized inner membrane transporter yedA	Integral membrane protein	Vng1626c	identified by match to PFAM protein family HMM PF03379 hypothetical protein	Putative membrane protein	Putative uncharacterized protein PF0486	Putative uncharacterized protein	Putative membrane protein	Inner membrane transport protein yedA	Putative uncharacterized protein VPA1215	Uncharacterized inner membrane transporter yedA	Putative uncharacterized protein	Residues 1 to 306 of 306 are 99 pct identical to residues 1 to 306 of a 306 aa protein from Escherichia coli O157:H7 ref: NP_310724.1 putative transmembrane subunit	Putative uncharacterized protein	permease, drug/metabolite transporter (DMT) superfamily	Probable transmembrane protein	Permease protein	putative permease	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Integral membrane protein	Transporter, putative	Putative permease	integral membrane protein	Protein of unknown function DUF6, transmembrane	Code: GER; COG: COG0697 putative transmembrane subunit	Protein of unknown function DUF6, transmembrane	Code: GER; COG: COG0697 putative transmembrane subunit	protein of unknown function DUF6, transmembrane PFAM: protein of unknown function DUF6, transmembrane: (5.4e-16) KEGG: ppu:PP4767 transporter, putative, ev=8e-79, 54% identity	Putative uncharacterized protein	
ECOLI01909	DNA-cytosine methyltransferase	DNA-cytosine methyltransferase	Cytosine-specific methyltransferase	Cytosine-specific methyltransferase	Cytosine-specific methyltransferase	DNA-cytosine methyltransferase	Cytosine-specific methyltransferase	DNA-cytosine methyltransferase	Cytosine-specific methyltransferase	Residues 1 to 472 of 472 are 99 pct identical to residues 1 to 472 of a 472 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288421.1 DNA cytosine methylase	Similar to cytosine-specific DNA methylase hypothetical protein	Type II restriction-modification system methylation subunit	hypothetical protein	IPR001525: C-5 cytosine-specific DNA methylase DNA cytosine methylase	similar to Salmonella typhi CT18 DNA-cytosine methyltransferase DNA-cytosine methyltransferase	Putative modification methylase	DNA cytosine methylase	Cytosine-specific methyltransferase	putative DNA restriction-modification system, DNA methylase	Code: L; COG: COG0270 DNA cytosine methylase	Code: L; COG: COG0270 DNA cytosine methylase	Cytosine-specific methyltransferase	Code: L; COG: COG0270 DNA cytosine methylase	Cytosine-specific methyltransferase	DNA-cytosine methyltransferase	DNA-cytosine methyltransferase	Cytosine-specific methyltransferase	DNA-cytosine methyltransferase KEGG: lpf:lpl0145 DNA (cytosine-5-)-methyltransferase TIGRFAM: DNA-cytosine methyltransferase PFAM: C-5 cytosine-specific DNA methylase	DNA-methyltransferase MKpn2kI Orthologue of Kpn2	
ECOLI01910	Uncharacterized protein yedJ	Predicted HD superfamily hydrolase	Putative uncharacterized protein PH1934	Hydrolase, containing HD domain, putative	Putative uncharacterized protein PF0224	HD domain protein	Putative uncharacterized protein	Putative uncharacterized protein STY2201	HD domain protein	Lmo1777 protein	Metal-dependent phosphohydrolase	Hydrolase, HD family	conserved hypothetical protein	Putative hydrolase	Hypothetical protein yedJ	identified by match to protein family HMM PF01966 HD domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	HD domain protein	Putative uncharacterized protein	Putative uncharacterized protein VPA1245	Putative uncharacterized protein yedJ	CDS_ID OB1742 hypothetical protein	HD domain protein	Putative uncharacterized protein	BH2835 protein	Lin1889 protein	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1788273 (232 aa). BLAST with identity of 96% in 180 aa. This CDS contains deletion. The sequence has been checked and is believed to be correct. pseudo	
ECOLI01911	Inner membrane protein yedR	Hypothetical protein yedR	Putative uncharacterized protein	putative inner membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Outer membrane protein N precursor	Putative membrane protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	pseudo	Outer membrane protein N	Outer membrane protein N	Outer membrane protein N	Putative membrane protein	Putative uncharacterized protein	Outer membrane protein N	Outer membrane protein N	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein yedR	Putative uncharacterized protein yedR	


ECOLI02145	Outer membrane protein C	Outer membrane protein C	Outer membrane protein C precursor	Outer membrane protein C	Residues 1 to 373 of 373 are 96 pct identical to residues 1 to 367 of a 367 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288795.1 outer membrane protein 1b (Ib;c)	Outer membrane protein C, porin	IPR000504: RNA-binding region RNP-1 (RNA recognition motif); IPR001702: Porin, Gram-negative type; IPR001897: Porin, bacterial type outer membrane protein 1b (ib;c), porin	similar to Salmonella typhi CT18 outer membrane protein C outer membrane protein C	Outer membrane protein C, porin	Outer membrane protein C	Code: M; COG: COG3203 outer membrane protein 1b (Ib;c)	Code: M; COG: COG3203 outer membrane protein 1b (Ib;c)	Ib;c; Code: M; COG: COG3203 outer membrane protein 1b	Outer membrane protein C	Outer membrane protein C, porin precursor	Outer membrane protein 1b	Outer membrane protein C, porin precursor	Outer membrane protein C, porin precursor	outer membrane protein 1b Code: M; COG: COG3203	Outer membrane protein C, porin precursor	outer membrane porin protein C OmpC	outer membrane porin, putative KEGG: son:SO1821 outer membrane porin, putative	Porin, Gram-negative type precursor	KEGG: sbl:Sbal_1631 porin, gram-negative type porin, gram-negative type	Outer membrane pore protein 1b	Putative uncharacterized protein	Outer membrane protein C	Porin Gram-negative type precursor	Outer membrane porin protein C	
ECOLI01913	Chaperone protein hchA	ThiJ/pfpI family protein	ThiJ/PfpI family protein	ThiJ/PfpI family protein	Chaperone protein hchA	go_component: soluble fraction [goid 0005625]; go_function: chaperone activity [goid 0003754]; go_function: cysteine-type peptidase activity [goid 0008234] conserved hypothetical protein	Chaperone protein hchA	Residues 1 to 282 of 283 are 98 pct identical to residues 1 to 282 of a 283 aa protein from Escherichia coli K12 ref: NP_416476.1 orf, conserved hypothetical protein	Chaperone protein hchA	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0556 ThiJ/PfpI family protein	conserved hypothetical protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative intracellular protease/amidase	Similar to Escherichia coli protein hypothetical protein YedU SW:YEDU_ECOLI (P31658) (282 aa) fasta scores: E(): 4.8e-62, 55.674% id in 282 aa, and to Pseudomonas aeruginosa hypothetical protein PA1135 TR:Q9I4K0 (EMBL:AE004543) (291 aa) fasta scores: E(): 6.6e-66, 59.929% id in 282 aa ThiJ/PfpI family protein	Code: R; COG: COG0693 conserved hypothetical protein	identified by similarity to GP:9947055; match to protein family HMM PF01965 conserved hypothetical protein	Hypothetical protein	DJ-1/PfpI family protein identified by match to protein family HMM PF01965	chaperone protein Hsp31	ThiJ/PfpI	putative intracellular protease/amidase-like	ThiJ/PfpI	Chaperone protein hchA	conserved hypothetical protein	Chaperone protein hchA	ThiJ/PfpI KEGG: bcn:Bcen_5029 ThiJ/PfpI	chaperone protein HchA identified by match to protein family HMM PF01965	conserved hypothetical protein	conserved hypothetical protein Evidence 4 : Homologs of previously reported genes of unknown function	
ECOLI01914	Putative sensor-like histidine kinase yedV	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	two-component sensor kinase	Residues 1 to 452 of 452 are 97 pct identical to residues 1 to 452 of a 452 aa protein from Escherichia coli O157:H7 ref: NP_310733.1 putative 2-component sensor protein	Sensor protein	Two component system histidine kinase	IPR003660: Histidine kinase, HAMP region; IPR005467: Histidine kinase Copper resistance; histidine kinase	similar to Salmonella typhi CT18 histidine kinase histidine kinase	Sensor protein	identified by match to PFAM protein family HMM PF00512 sensor histidine kinase	Sensor protein	best blastp match gb|AAK34698.1| (AE006624) putative histidine kinase [Streptococcus pyogenes M1 GAS] putative histidine kinase	two component sensor kinase	Sensor protein	Heavy metal sensor kinase	identified by match to protein family HMM PF00512; match to protein family HMM PF02518 sensor histidine kinase	two component system histidine kinase	Code: T; COG: COG0642 putative 2-component sensor protein	
ECOLI01915	Probable transcriptional regulatory protein yedW	Probable transcriptional Regulatory protein yedW	Two-component response regulator	Two-component response regulator	Putative 2-component transcriptional regulator	Residues 1 to 260 of 260 are 98 pct identical to residues 1 to 260 of a 260 aa protein from Escherichia coli dbj: BAA15796.1 Transcriptional activator protein CopR.	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal Copper resistance; transcriptional regulatory protein	similar to Salmonella typhi CT18 response regulator response regulator	Copper resistance transcriptional regulatory protein	Code: TK; COG: COG0745 putative 2-component transcriptional regulator	Code: TK; COG: COG0745 putative 2-component transcriptional regulator	two component heavy metal response transcriptional regulator, winged helix family	Code: TK; COG: COG0745 putative 2-component transcriptional regulator	Probable transcriptional regulatory protein YedW	two component heavy metal response transcriptional regulator, winged helix family	Putative 2-component transcriptional regulator yedW	Two component heavy metal response transcriptional regulator, winged helix family	putative 2-component transcriptional regulator Code: TK; COG: COG0745	putative 2-component transcriptional regulator	Heavy metal response regulator	Putative uncharacterized protein	Heavy metal response regulator	Predicted DNA-binding response regulator in two- component system with YedV	Heavy metal response regulator	Two component heavy metal response transcriptional regulator, winged helix family precursor	Heavy metal response regulator	Putative uncharacterized protein	Putative uncharacterized protein	Two component heavy metal response transcriptional regulator, winged helix family	
ECOLI01916	Transthyretin-like protein	similar to CA1311|IPF14233 Candida albicans IPF14233 and DEHA-IPF10476.1 Debaryomyces hansenii, start by similarity	Probable 5-hydroxyisourate hydrolase [Source:GeneDB_Spombe;Acc:SPCC285.04]	similar to ca|CA1311|IPF14233 Candida albicans Putative transthyretin precursor (by homology), start by similarity	DEHA2D03630p;similar to CA1311|IPF14233 Candida albicans;	Transthyretin	5-hydroxyisourate hydrolase	Transthyretin-like protein	conserved hypothetical protein	Putative uncharacterized protein	5-hydroxyisourate hydrolase	Residues 1 to 137 of 137 are 99 pct identical to residues 1 to 137 of a 137 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288429.1 orf, conserved hypothetical protein	identified by match to protein family HMM PF00576 transthyretin-like protein	IPR000895: Transthyretin putative periplasmic or exported protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type ph : phenotype putative transthyretin-like protein	5-hydroxyisourate hydrolase	identified by similarity to SP:P76341; match to protein family HMM PF00576 conserved hypothetical protein	identified by match to protein family HMM PF00576 transthyretin family protein	Transthyretin	Code: R; COG: COG2351 conserved hypothetical protein	transthyretin-like exported protein	Transthyretin	Transthyretin	Transthyretin-like protein COG2351	Code: R; COG: COG2351; orf conserved hypothetical protein	5-hydroxyisourate hydrolase	5-hydroxyisourate hydrolase	
ECOLI01917	UPF0190 protein yedY	UPF0190 protein XCC1588	UPF0190 protein CC_2748	UPF0190 protein PM0537	UPF0190 protein PA4692	UPF0190 protein Cj0379c	UPF0190 protein DR_2536	UPF0190 protein Atu1919	UPF0190 protein yedY	Sulfoxide reductase catalytic subunit yedY	putative reductase	UPF0190 protein yedY	similar to GP:15157038, and GP:15074316; identified by sequence similarity; putative oxidoreductase, molybdopterin-binding	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Sulfoxide reductase catalytic subunit yedY	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Sulfoxide reductase catalytic subunit yedY	Putative uncharacterized protein	Sulfoxide reductase catalytic subunit yedY	UPF0190 protein BMA2758 precursor	UPF0190 protein BMEII0305 precursor	Sulfoxide reductase catalytic subunit yedY	similar to Escherichia coli K12 putative reductase gi: 1788282 (335 aa). BLAST with identity of 97% in 335 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	UPF0190 protein YPO3662/y0205/YP_3884	Sulfoxide reductase catalytic subunit yedY	identified by match to protein family HMM PF00174; match to protein family HMM TIGR01409 oxidoreductase, molybdopterin-binding	Sulfoxide reductase catalytic subunit yedY	
ECOLI01918	UPF0191 membrane protein yedZ	UPF0191 membrane protein CC_2747	UPF0191 membrane protein PM0538	UPF0191 membrane protein PA4691	UPF0191 membrane protein DR_2537	UPF0191 membrane protein Atu1920	UPF0191 membrane protein yedZ	Putative membrane protein	hypothetical inner membrane protein	UPF0191 membrane protein yedZ	similar to GP:15074315, and GP:15074315; identified by sequence similarity; putative membrane protein, putative	Sulfoxide reductase heme-binding subunit yedZ	Sulfoxide reductase heme-binding subunit yedZ	Putative uncharacterized protein	Sulfoxide reductase heme-binding subunit yedZ	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Sulfoxide reductase heme-binding subunit yedZ	Sulfoxide reductase heme-binding subunit yedZ	MEMBRANE PROTEIN	Membrane protein, putative	UPF0191 membrane protein BMEII0304	Sulfoxide reductase heme-binding subunit yedZ	Residues 1 to 211 of 211 are 97 pct identical to residues 1 to 211 of a 211 aa protein from Escherichia coli K12 ref: NP_416481.1 orf, conserved hypothetical protein	UPF0191 membrane protein YPO3661/y0206/YP_3885	Sulfoxide reductase heme-binding subunit yedZ	identified by similarity to SP:Q8YD73; match to protein family HMM PF05252 membrane protein, putative	Putative uncharacterized protein	Conserved hypothetical membrane protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	
ECOLI01919	Metal-binding protein yodA	Putative uncharacterized protein	Putative zinc-binding lipoprotein AdcA	PXO1-130 like-protein; C-terminal of zinc-binding protein AdcA	Hypothetical protein yodA	Putative uncharacterized protein	Residues 1 to 216 of 216 are 97 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli K12 ref: NP_416482.1 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative periplasmic protein	Code: R; COG: COG3443 conserved hypothetical protein	similar to COG3443, Predicted periplasmic or secreted protein [General function prediction only] conserved throughout bacteria. Conserved hypothetical protein	Code: R; COG: COG3443 conserved hypothetical protein	hypothetical protein	Code: R; COG: COG3443; orf conserved hypothetical protein	conserved hypothetical protein KEGG: ret:RHE_PF00158 hypothetical protein, ev=2e-72, 59% identity	hypothetical conserved protein Similar to AGR_C_1935p [Agrobacterium tumefaciens].  C-terminal similar to C-terminal of zinc-binding proteinadcA precursor (sp|Q9A0L9|ADCA_STRPY) [Streptococcuspyogenes] Similar to swissprot:Q8UGI8 Putative location:bacterial outer membrane Psort-Score: 0.5801	Putative uncharacterized protein	Putative uncharacterized protein yodA	Putative exported protein precursor	conserved hypothetical protein KEGG: rsp:RSP_3117 hypothetical protein	conserved hypothetical protein Code: R; COG: COG3443	Putative zinc , manganese transport system substrate-binding protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Metal-binding protein	Conserved metal-binding protein	Metal-binding protein	Ribulose-phosphate 3-epimerase precursor	
ECOLI01920	Cytochrome b561 homolog 1	Putative cytochrome	Putative cytochrome b561	Putative cytochrome	Putative B-type cytochrome	putative inner membrane protein	similar to Salmonella typhi CT18 putative cytochrome putative cytochrome	Putative B-type cytochrome	Putative inner membrane protein	identified by similarity to SP:P08732; match to protein family HMM PF01292 cytochrome b561	Cytochrome B561, bacterial	Code: C; COG: COG3038 putative cytochrome	Cytochrome B561	Cytochrome B561	Cytochrome B651	Putative B-type cytochrome	B-type cytochrome	Cytochrome B561	cytochrome B561 PFAM: cytochrome B561 KEGG: bcn:Bcen_4454 cytochrome b561	cytochrome b561 identified by match to protein family HMM PF01292	Putative B-type cytochrome precursor	Cytochrome b561	Cytochrome b561	Cytochrome b561	B-type cytochrome	B-type cytochrome	Putative B-type cytochrome subunit	Cytochrome B561 precursor	Cytochrome B561	
ECOLI01921	Protein mtfA	Uncharacterized protein slr2042	Putative uncharacterized protein	Putative uncharacterized protein	Protein mtfA	All4231 protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein yeeI	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein mtfA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein mtfA	Residues 1 to 278 of 278 are 98 pct identical to residues 1 to 278 of a 278 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288486.1 orf, conserved hypothetical protein	Protein mtfA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR006025: Neutral zinc metallopeptidases, zinc-binding site putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Protein mtfA	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01922	Uncharacterized protein yeeJ	Putative adhesin	Uncharacterized protein yeeJ	Putative invasin	Serine-rich adhesin for platelets	Streptococcal hemagglutinin protein	hypothetical protein, similar to streptococcal hemagglutinin protein	Similar to internal region of Streptococcus gordonii platelet binding protein GspB SWALL:Q939N5 (EMBL:AY028381) (3072 aa) fasta scores: E(): 3.4e-130, 42.3% id in 2234 aa, and to Lactobacillus plantarum cell surface SD repeat protein precursor Sdr or lp_1303.1 or lp_1303A SWALL:Q88XB6 (EMBL:AL935255) (3360 aa) fasta scores: E(): 8e-119, 42.16% id in 2196 aa putative cell wall-anchored protein	hypothetical protein, similar to streptococcal hemagglutinin protein	proteophosphoglycan ppg1	identified by match to protein family HMM PF00746; match to protein family HMM PF05345; match to protein family HMM TIGR01167 LPXTG cell wall surface anchor family protein	putative adhesin start codon not provided	LPXTG-motif cell wall surface anchor family protein identified by match to protein family HMM PF00746; match to protein family HMM PF05345; match to protein family HMM TIGR01167	truncated methicillin resistance-related surface protein	outer membrane autotransporter barrel	Haemagluttinin motif protein	Putative invasin precursor	conserved hypothetical protein	EntS/YbdA MFS transporter	outer membrane autotransporter barrel domain TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein PFAM: Autotransporter beta- domain protein KEGG: bur:Bcep18194_B0758 outer membrane autotransporter barrel	Autotransporter adhesin	outer membrane autotransporter barrel domain TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein PFAM: Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein KEGG: bur:Bcep18194_B0758 outer membrane autotransporter barrel	outer membrane protein, putative identified by match to protein family HMM PF05658; match to protein family HMM PF05662	Putative adhesin	Hypothetical protein	Putative cell surface protein	Subtilisin-like serine protease	190-kDa cell surface antigen	Streptococcal hemagglutinin	
ECOLI01923	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	ADP-heptose:LPS heptosyltransferase-like protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Predicted ADP-heptose: LPS heptosyltransferase	Putative uncharacterized protein	Predicted protein	
ECOLI01924	Shikimate transporter	Shikimate transporter	Putative transport protein, shikimate	sugar transporter	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter shikimate and dehydroshikimate transport protein (MFS superfamily)	Citrate-proton symport	Code: GEPR; COG: COG0477 putative transport protein, shikimate	Metabolite	Shikimate transporter	major facilitator superfamily MFS_1 PFAM: General substrate transporter major facilitator superfamily MFS_1 KEGG: bja:bll0889 putative transport protein	Shikimate transporter	metabolite/H+ symporter, major facilitator superfamily (MFS) TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS) PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: bur:Bcep18194_B1626 citrate-proton symport	metabolite/H+ symporter, major facilitator superfamily (MFS) TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS) PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: bcn:Bcen_3973 metabolite	Major facilitator superfamily (MFS)citrate/H+symporter	metabolite-proton symporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00883	Major facilitator superfamily protein	permease of the major facilitator superfamily	Shikimate transporter, MFS superfamily protein	Metabolite/H+ symporter, major facilitator superfamily	Metabolite/H+ symporter, major facilitator superfamily	Shikimate and dehydroshikimate transport protein	Shikimate transporter	Shikimate transporter	Shikimate transporter	Metabolite/H+ symporter, major facilitator superfamily	Shikimate transporter	Putative uncharacterized protein	Metabolite/H+ symporter, major facilitator superfamily	Metabolite/H+ symporter, major facilitator superfamily	
ECOLI01925	AMP nucleosidase	AMP nucleosidase	AMP nucleosidase	AMP nucleosidase	AMP nucleosidase	Nucleoside phosphorylase	AMP nucleosidase	AMP nucleosidase	identified by match to PFAM protein family HMM PF01048 AMP nucleosidase	Putative nucleosidase	Putative nucleosidase	AMP nucleosidase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE AMP NUCLEOSIDASE PROTEIN	AMP nucleosidase	Putative nucleosidase	AMP nucleosidase	AMP NUCLEOSIDASE	AMP nucleosidase	similar to AX064767-1|CAC25623.1| percent identity: 81 in 469 aa putative AMP nucleosidase	AMP nucleosidase	Residues 36 to 519 of 519 are 99 pct identical to residues 1 to 484 of a 484 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288491.1 AMP nucleosidase	Putative AMP nucleosidase	Probable amp nucleosidase protein	identified by similarity to SP:P15272; match to protein family HMM PF01048; match to protein family HMM TIGR01717 AMP nucleosidase	AMP nucleosidase	AMP nucleosidase	similar to Salmonella typhi CT18 AMP nucleosidase AMP nucleosidase	similar to BR0623, AMP nucleosidase Amn, AMP nucleosidase	Putative AMP nucleosidase	
ECOLI01926	UPF0082 protein yeeN	UPF0082 protein C8D2.12c [Source:GeneDB_Spombe;Acc:SPBC8D2.12c]	UPF0082 protein EF_2866	UPF0082 protein VVA0010	UPF0082 protein yeeN	UPF0082 protein BA_0541/GBAA_0541/BAS0510	UPF0082 protein lmo0369	UPF0082 protein BC_0539	UPF0082 protein BT9727_0453	conserved hypothetical protein	UPF0082 protein yeeN	UPF0082 protein SP_1922	identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033 conserved hypothetical protein TIGR01033	UPF0082 protein VC_A0006	UPF0082 protein SO_3401	UPF0082 protein HP_0162	UPF0082 protein SpyM3_0231/SPs1628	UPF0082 protein SMU_1789c	UPF0082 protein VPA0011	UPF0082 protein yeeN	UPF0082 protein BH3259	UPF0082 protein Mfl546	UPF0082 protein VV2_1184	UPF0082 protein lin0388	Residues 1 to 238 of 238 are 99 pct identical to residues 1 to 238 of a 238 aa protein from Escherichia coli K12 ref: NP_416490.1 orf, conserved hypothetical protein	UPF0082 protein SAV0669	identified by similarity to OMNI:SA0727; match to protein family HMM PF01709; match to protein family HMM TIGR01033 conserved hypothetical protein TIGR01033	Hypothetical cytosolic protein	conserved hypothetical protein	
ECOLI01927	Uncharacterized transporter yeeO	MATE efflux family protein	Putative inner membrane protein	Hypothetical protein yeeO	Putative efflux protein	Putative uncharacterized protein	Probable cation efflux pump	Putative sugar transporter	putative MATE family transport protein	Putative MATE family multidrug efflux pump	Putative MATE family transport protein	Code: V; COG: COG0534 conserved hypothetical protein	Putative uncharacterized protein	Putative sugar transporter	Putative uncharacterized protein yeeO	Sugar transporter	Putative sugar transporter	MATE efflux family protein	Sugar transporter	conserved hypothetical protein	MATE efflux family protein	MATE efflux family protein	Putative transport protein	Putative uncharacterized protein	MATE efflux family protein	MATE efflux family protein	Multi antimicrobial extrusion protein MatE	Predicted multidrug efflux system	MATE efflux family protein	
ECOLI01928	HTH-type transcriptional regulator cbl	Transcriptional regulator cbl	Putative LysR-family transcriptional regulator	LysR-family transcriptional regulator	Putative LysR-family transcriptional regulator	Cys regulon transcriptional activator	Transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM	Transcriptional regulator, LysR family	Residues 1 to 316 of 316 are 96 pct identical to residues 1 to 316 of a 316 aa protein from Escherichia coli K12 ref: NP_416492.1 transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM	Bacterial regulatory protein, LysR family	Putative cys regulon transcriptional activator transcription regulator protein	Transcriptional regulator	Putative uncharacterized protein cpsY	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator transcriptional regulator cysteine biosynthesis (LysR family)	regulatory protein, LysR:LysR, substrate-binding	regulatory protein, LysR:LysR, substrate-binding	identified by similarity to GB:CAB36977.1; match to protein family HMM PF00126 transcriptional regulator CpsY	Code: K; COG: COG0583 transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM	transcriptional regulator, LysR family	transcriptional regulator, LysR family	transcriptional regulator, LysR family	accessory regulatory circuit affecting cysM; Code: K; COG: COG0583 transcriptional regulator cys regulon	Transcriptional regulator, LysR family	cys regulon transcriptional activator identified by match to protein family HMM PF00126; match to protein family HMM PF03466	Transcriptional regulator cbl	transcriptional regulator, LysR family	Transcriptional activator cbl	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bur:Bcep18194_A4743 transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: rme:Rmet_1379 transcriptional regulator, LysR family	
ECOLI01929	Nitrogen assimilation regulatory protein nac	Transcriptional regulator, LysR family	Nitrogen assimilation Regulatory protein nac	LysR family regulatory protein	Nitrogen assimilation regulatory protein	Nitrogen assimilation regulatory protein Nac, putative	LysR family regulatory protein	Putative transcriptional regulator	Nitrogen assimilation control protein	nitrogen assimilation control protein	Residues 11 to 315 of 315 are 99 pct identical to residues 1 to 305 of a 305 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288496.1 nitrogen assimilation control protein	Probable nitrogen assimilation regulatory transcription regulator protein	Transcriptional regulator protein	identified by similarity to SP:Q08597; match to protein family HMM PF00126; match to protein family HMM PF03466 nitrogen assimilation regulatory protein Nac, putative	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	regulatory protein, LysR:LysR, substrate-binding	regulatory protein, LysR:LysR, substrate-binding	Code: K; COG: COG0583 nitrogen assimilation control protein	transcriptional regulator, LysR family	Code: K; COG: COG0583 nitrogen assimilation control protein	Transcriptional regulator, LysR family	probable transcriptional regulator protein, LysR family Similar to nitrogen assimilation regulator nac (AGR_L_1169p) [Agrobacterium tumefaciens] Similar to swissprot:Q8U820 Putative location:bacterial cytoplasm Psort-Score: 0.0245; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	Nitrogen assimilation regulatory protein Nac	Transcriptional regulator, LysR family	Nitrogen assimilation regulatory protein nac	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bpa:BPP0348 LysR family regulatory protein	Transcriptional regulator	Transcriptional regulator	Transcriptional regulator, LysR family	
ECOLI01930	Protein erfK/srfK	Putative exported protein	Protein erfK/srfK	Putative uncharacterized protein erfK	Residues 2 to 311 of 311 are 98 pct identical to residues 1 to 310 of a 310 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288497.1 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	LysM domain protein	Protein erfK/srfK	Code: S; COG: COG1376 conserved hypothetical protein	Code: S; COG: COG1376; orf conserved hypothetical protein	Protein ErfK/SrfK	Putative uncharacterized protein erfK	conserved hypothetical protein Code: S; COG: COG1376	conserved protein with NAD(P)-binding Rossmann-fold domain	Putative uncharacterized protein erfK	Putative uncharacterized protein	ErfK/YbiS/YcfS/YnhG family protein	Conserved protein with NAD(P)-binding Rossmann- fold domain	ErfK/YbiS/YcfS/YnhG family protein	ErfK/YbiS/YcfS/YnhG family protein precursor	ErfK/YbiS/YcfS/YnhG family protein	Putative uncharacterized protein	ErfK/YbiS/YcfS/YnhG family protein precursor	Putative uncharacterized protein	ErfK/YbiS/YcfS/YnhG family protein	Putative exported protein	Protein ErfK/srfK	Protein ErfK/srfK	
ECOLI01931	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Putative nicotinate-nucleotide-- dimethylbenzimidazole phosphoribosyltransferase	hypothetical nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	similar to GP:15074818, GB:M65217, SP:Q03933, and PID:184405; identified by sequence similarity; putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Product confidence : probable Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE NICOTINATE-NUCLEOTIDE--DIMETHYLBENZIMIDAZOLE PHOSPHORIBOSYLTRANSFERASE PROTEIN	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	
ECOLI01932	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase 2	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Putative cobalamin (5'-phosphate) synthase	Cobalamin-5-phosphate synthase CobS	Cobalamin synthase	Cobalamin (5'-phosphate) synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin-5-phosphate synthase CobS	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin synthase	Cobalamin [5'-phosphate] synthase	Cobalamin biosynthesis protein	Cobalamin synthase	Cobalamin synthase	Related to cobalamin synthase	
ECOLI01933	Bifunctional adenosylcobalamin biosynthesis protein cobU	Cobinamide kinase	Bifunctional cobalamin biosynthesis protein CobU	Cobinamide kinase/cobinamide phosphate guanylyltransferase	Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase	Cobalamin biosynthesis protein CobP	Putative cobinamide kinase	Putative cobinamide kinase	Bifunctional adenosylcobalamin biosynthesis protein cobP	Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase	Cobinamide kinase/cobinamide phosphate guanylyltransferase	Cobinamide kinase	Bifunctional adenosylcobalamin biosynthesis protein cobP	Cobinamide kinase and guanylyltransferase	Cobinamide kinase	Related to bifunctional cobalamin biosynthesis protein	Lmo1147 protein	Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase	Cobinamide kinase	Putative bifunctional cobalamin biosynthesis protein	putative cobinamide kinase	Cobalamin biosynthesis protein cobU	similar to GP:15074981, and SP:P29931; identified by sequence similarity; putative cobinamide kinase/cobinamide phosphate guanylyltransferase	Cobinamide kinase/cobinamide phosphate guanylyltransferase	Cobinamide kinase/cobinamide phosphate guanylyltransferase	Cobinamide kinase/cobinamide phosphate guanylyltransferase	Cobinamide kinase and guanylyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE BIFUNCTIONAL COBALAMIN BIOSYNTHESIS PROTEIN (INCLUDES: COBINAMIDE KINASE AND COBINAMIDE PHOSPHATE GUANYLYLTRANSFERASE)	Cobinamide kinase	
ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	

ECOLI01533	pseudo	Code: L; COG: COG2801 IS2 ORF2	
ECOLI01533	pseudo	Code: L; COG: COG2801 IS2 ORF2	


ECOLI01937	Putative uncharacterized protein yeeP	Putative histone	Residues 1 to 290 of 290 are 100 pct identical to residues 1 to 290 of a 290 aa protein from Shigella flexneri 2a gb: AAK00473.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative GTPase	Putative GTPase	Putative GTPase	Putative GTP-binding protein	Putative uncharacterized protein	Putative uncharacterized protein	

ECOLI01938	Antigen 43	Autotransporter	Putative autotransporter	PE-PGRS FAMILY PROTEIN	Mb0285c, PE_PGRS3a, len: 868 aa. Similar to 5' end of Rv0278c, len: 957 aa, from Mycobacterium tuberculosis strain H37Rv, (80.7% identity in 888 aa overlap). Member of the Mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins, similar to many e.g.  Z95890|MTCY28_25|Rv1759c from Mycobacterium tuberculosis (914 aa), FASTA scores: opt: 3849, E(): 0, (67.8% identity in 903 aa overlap). Contains PS00583 pfkB family of carbohydrate kinases signature 1.  REMARK-M.bovis-M.tuberculosis: In Mycobacterium tuberculosis strain H37Rv, PE_PGRS3 exists as a single gene. In Mycobacterium bovis, a 2780 bp insertion leads to an extra copy of PE_PGRS3. Also, a frameshift due to single base deletion (t-*), splits this extra copy of PE_PGRS3 into 2 parts, PE_PGRS3a and PE_PGRS3b. PE-PGRS FAMILY PROTEIN [FIRST PART]	identified by match to protein family HMM PF03212; match to protein family HMM PF03797; match to protein family HMM TIGR01414 outer membrane autotransporter	Outer membrane autotransporter barrel	Outer membrane autotransporter barrel	Putative autotransporter	YadA C-terminal domain protein PFAM: YadA C-terminal domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein	outer membrane autotransporter barrel domain TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein PFAM: Autotransporter beta- domain protein KEGG: bcn:Bcen_4985 outer membrane autotransporter barrel	outer membrane autotransporter barrel domain TIGRFAM: outer membrane autotransporter barrel domain autotransporter-associated beta strand repeat protein PFAM: Autotransporter beta-domain KEGG: bms:BRA1148 outer membrane autotransporter	Putative outer membrane protein	PE-PGRS family protein	Autotransporter	ustilago_maydis hypothetical protein	Outer membrane autotransporter barrel domain protein precursor	Outer membrane autotransporter barrel domain precursor	Outer membrane autotransporter barrel domain	Putative uncharacterized protein	Collagen triple helix repeat PFAM: Collagen triple helix repeat	CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter	Antigen 43	Outer membrane autotransporter barrel domain protein	Putative autoporter protein, type V secretion system	Collagen triple helix repeat	Outer membrane autotransporter barrel domain protein	status:Predicted	putative autotransporter protein Similar to the C-terminal region of Bordetella parapertussis autotransporter SWALL:Q7WC79 (EMBL:BX640424) (1616 aa) fasta scores: E(): 7.3e-42, 33.64% id in 1165 aa	
ECOLI01939	Inner membrane protein yeeR	CP4-44 prophage; predicted membrane protein	
ECOLI01940	Putative radC-like protein yeeS	DNA repair protein RadC homolog	DEAD/DEAH box helicase-like	DNA repair protein RadC	DNA repair protein	DNA repair protein RadC	DNA repair protein RadC	Putative uncharacterized protein	DNA repair protein RadC	DNA repair protein, RadC family	DNA repair protein	CP4-44 prophage; predicted DNA repair protein	Hypothetical DNA repair proteins	DNA repair protein, RadC family	DNA repair protein, RadC family	Predicted protein	CP4-44 prophage; predicted DNA repair protein	Putative DNA repair protein	
ECOLI01941	Uncharacterized protein yeeT	Putative uncharacterized protein	CP4-44 prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yeeT	Predicted protein	CP4-44 prophage; predicted protein	Putative uncharacterized protein	
ECOLI01942	Uncharacterized protein yeeU	Putative structural protein	Residues 1 to 125 of 125 are 100 pct identical to residues 2 to 126 of a 126 aa protein from Shigella flexneri 2a gb: AAK00481.1 orf, conserved hypothetical protein	putative structural protein	antitoxin of the YeeV-YeeU toxin-antitoxin system	Putative uncharacterized protein	CP4-44 prophage; antitoxin of the YeeV-YeeU toxin -antitoxin system	YagBYeeUYfjZ family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	YagB/YeeU/YfjZ family protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	Antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage	Antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage	Antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage	CP4-44 prophage; antitoxin of the YeeV-YeeU toxin -antitoxin system	CP4-44 prophage; antitoxin of the YeeV-YeeU toxin -antitoxin system	hypothetical protein	
ECOLI01943	Uncharacterized protein yeeV	Putative uncharacterized protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yeeV1	CP4-44 prophage; toxin of the YeeV-YeeU toxin- antitoxin system	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Toxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage	Predicted protein	CP4-44 prophage; toxin of the YeeV-YeeU toxin- antitoxin system	
ECOLI01944	Putative uncharacterized protein yeeW	Uncharacterized protein yeeW	Putative uncharacterized protein	Putative uncharacterized protein yeeW1	CP4-44 prophage; predicted protein	Conserved domain protein	Conserved domain protein	Conserved domain protein	Putative uncharacterized protein yeeW	Putative uncharacterized protein yeeW	Putative uncharacterized protein yeeW	CP4-44 prophage; predicted protein	hypothetical protein	
ECOLI01946	UPF0265 protein yeeX	UPF0265 protein HI1168	UPF0265 protein PM0836	UPF0265 protein VVA1227	UPF0265 protein yeeX	putative alpha helix protein	UPF0265 protein yeeX	UPF0265 protein VC_A0741	UPF0265 protein ECA2560	UPF0265 protein BUsg_538	UPF0265 protein VPA1226	UPF0265 protein yeeX	UPF0265 protein BU556	UPF0265 protein VV2_0759	Residues 1 to 131 of 131 are 100 pct identical to residues 1 to 131 of a 131 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288512.1 putative alpha helix protein	UPF0265 protein YPO1560/y2607/YP_1448	UPF0265 protein plu2843	UPF0265 protein Bfl460	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0265 protein YPTB1571	hypothetical protein	Similar to: HI1168, YB68_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	UPF0265 protein yeeX	conserved hypothetical protein	ortholog to Escherichia coli bnum: b2007 conserved hypothetical protein	Code: S; COG: COG2926 putative alpha helix protein	Code: S; COG: COG2926 putative alpha helix protein	
ECOLI01947	Inner membrane protein yeeA	Putative membrane protein	Hypothetical membrane protein	Putative membrane protein	Hypothetical protein yeeA	Membrane protein, putative	Putative membrane protein	Putative uncharacterized protein yeeA	Hypothetical membrane spanning protein	Probable transmembrane protein	Putative uncharacterized protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative integral membrane protein	Similar to Q83C03 Conserved domain protein from Coxiella burnetii (377 aa). FASTA: opt: 359 Z-score: 409.9 E(): 6.1e-15 Smith-Waterman score: 380; 27.350 identity in 351 aa overlap ORF ftt0443 conserved hypothetical membrane protein	Putative inner membrane protein	membrane protein, putative	membrane protein, putative	probable transmembrane protein	membrane protein, putative	Best Blastp Hit: gb|AAF40645.1| (AE002376) conserved hypothetical protein [Neisseria meningitidis MC58] conserved hypothetical protein	Code: S; COG: COG1289 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	membrane protein, putative	membrane protein	Code: S; COG: COG1289; orf conserved hypothetical protein	Membrane protein	putative membrane protein	
ECOLI01948	DNA gyrase inhibitory protein	Related to DNA gyrase inhibitory protein	DNA gyrase inhibitory protein	SbmC protein	DNA gyrase inhibitor	similar to Salmonella typhi CT18 putative DNA gyrase inhibitory protein putative DNA gyrase inhibitory protein	DNA gyrase inhibitory protein homolog	Code: L; COG: COG3449 SbmC protein	DNA gyrase inhibitory protein	DNA gyrase inhibitory protein	DNA gyrase inhibitory protein	DNA gyrase inhibitor	Transcription activator, effector binding	DNA gyrase inhibitor	Putative uncharacterized protein	DNA gyrase inhibitory protein	Transcription activator effector binding	DNA gyrase inhibitor	DNA gyrase inhibitory protein	Transcription activator effector binding	DNA gyrase inhibitory protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	DNA gyrase inhibitory protein	Putative DNA gyrase inhibitory protein	DNA gyrase inhibitory protein	DNA gyrase inhibitory protein	DNA gyrase inhibitory protein	
ECOLI01949	D-alanyl-D-alanine carboxypeptidase dacD	Putative D-alanyl-D-alanine carboxypeptidase	Serine-type D-Ala-D-Ala carboxypeptidase	Penicillin-binding protein dacF	pseudo	putative D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein 6B	D-alanyl-D-alanine carboxypeptidase	PENICILLIN-BINDING PROTEIN	D-alanyl-D-alanine carboxypeptidase	Penicillin binding protein 6b	SC4G1.16c, probable D-alanyl-D-alanine carboxypeptidase, len: 413 aa; similar to TR:CAB89066 (EMBL:AL353872) Streptomyces coelicolor putative D-alanyl-D-alanine carboxypeptidase SC5G8.15c, 424 aa; fasta scores: opt: 704 z-score: 719.2 E(): 1.4e-32; 47.7% identity in 390 aa overlap and to SW:DACF_BACSU (EMBL:M85047) Bacillus subtilis penicillin-binding protein DacF precursor, 389 aa; fasta scores: opt: 330 z-score: 341.5 E(): 1.5e-11; 27.1% identity in 262 aa overlap.  Contains Pfam match to entry PF00768 Peptidase_S11, D-alanyl-D-alanine carboxypeptidase putative D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein	Penicillin binding protein 4	IPR001967: Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 DD-carboxypeptidase, penicillin-binding protein 6b	Penicillin-binding protein	penicillin binding protein 4	Similar to rp||dacF; Ortholog to ERGA_CDS_08610 Penicillin-binding protein dacF precursor	D-alanyl-D-alanine carboxypeptidase dacD	peptidase S11, D-alanyl-D-alanine carboxypeptidase 1	Code: M; COG: COG1686 penicillin binding protein 6b	identified by match to protein family HMM PF00144; match to protein family HMM PF00768 penicillin-binding protein 4	penicillin-binding protein 4 identified by match to protein family HMM PF00144; match to protein family HMM PF00768	Code: M; COG: COG1686 penicillin binding protein 6b	putative penicillin-binding protein precursor similarity:fasta; with=UniProt:DACC_ECOLI (EMBL:ECD722); Escherichia coli.; dacC; Penicillin-binding protein 6 precursor (D-alanyl-D-alanine carboxypeptidase fraction C) (EC 3.4.16.4) (DD-peptidase) (DD- carboxypeptidase) (PBP-6).; length=400; id 35.161; 310 aa overlap; query 3-298; subject 5-314 similarity:fasta; with=UniProt:Q92MD7_RHIME (EMBL:SME591791); Rhizobium meliloti (Sinorhizobium meliloti).; PUTATIVE PENICILLIN-BINDING PROTEIN.; length=360; id 61.281; 359 aa overlap; query 18-375; subject 2-359	Serine-type D-Ala-D-Ala carboxypeptidase	Penicillin-binding protein 6B	D-alanyl-D-alanine carboxypeptidase identified by similarity to SP:P38422; match to protein family HMM PF00768; match to protein family HMM PF07943	Serine-type D-Ala-D-Ala carboxypeptidase precursor	
ECOLI01950	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	SbcB	Exodeoxyribonuclease I	Exonuclease I	Exodeoxyribonuclease I	putative exonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exonuclease I, 3'--] 5' specific; deoxyribophosphodiesterase	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exonuclease I	Residues 1 to 474 of 474 are 97 pct identical to residues 2 to 475 of a 475 aa protein from Escherichia coli K12 ref: NP_416515.1 exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Putative exodeoxyribonucleaseIprotein	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	Exodeoxyribonuclease I	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark exodeoxyribonuclease I	
ECOLI01951	UPF0033 protein yeeD	Putative uncharacterized protein	Putative uncharacterized protein yeeD	Residues 1 to 75 of 75 are 100 pct identical to residues 1 to 75 of a 75 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288517.1 orf, conserved hypothetical protein	Putative uncharacterized protein	identified by similarity to OMNI:NTL01SA1924; match to protein family HMM PF01206 conserved hypothetical protein	transcription regulator, putative	Hypothetical protein SE1645	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2131 conserved hypothetical protein	conserved hypothetical protein	transcriptional regulator, putative	similar to unknown protein	Similar to Escherichia coli hypothetical protein YeeD SW:YEED_ECOLI (P33014) (75 aa) fasta scores: E(): 3.3e-17, 63.01% id in 73 aa, and to Escherichia coli, hypothetical protein YedF SW:YEDF_ECOLI (P31065) (77 aa) fasta scores: E(): 0.00059, 32.39% id in 71 aa conserved hypothetical protein	Code: O; COG: COG0425 conserved hypothetical protein	identified by match to protein family HMM PF01206 conserved hypothetical protein	similar to gi|27468563|ref|NP_765200.1| [Staphylococcus epidermidis ATCC 12228], percent identity 91 in 74 aa, BLASTP E(): 2e-34 conserved hypothetical protein	Code: O; COG: COG0425 conserved hypothetical protein	conserved hypothetical protein identified by match to protein family HMM PF01206	conserved hypothetical protein	conserved hypothetical protein	Code: O; COG: COG0425; orf conserved hypothetical protein	conserved hypothetical protein	Predicted redox protein, regulator of disulfide bond formation	conserved hypothetical protein Code: O; COG: COG0425	Conserved domain protein	Putative uncharacterized protein	Putative uncharacterized protein	SirA family protein PFAM: SirA family protein KEGG: sav:SAV2044 hypothetical protein	
ECOLI01952	UPF0394 inner membrane protein yeeE	Membrane protein, putative	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein CPE0735	Putative uncharacterized protein	Putative membrane protein	Putative permease	Putative membrane protein	Putative transport system permease protein	CDS_ID OB3144 hypothetical protein	similar to AP003135-294|BAB43132.1| percent identity: 41 in 341 aa conserved hypothetical protein	Predicted transporter components	Residues 1 to 352 of 352 are 98 pct identical to residues 1 to 352 of a 352 aa protein from Escherichia coli O157:H7 ref: NP_310842.1 putative transport system permease protein	Probable transport system permease protein	permease, putative	Hypothetical protein SE1646	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2132 putative membrane protein	conserved hypothetical protein	Predicted transporter components Hypothetical protein	Conserved hypothetical, predicted membrane protein (TMS9)	putative transport system permease protein	putative membrane protein	hypothetical protein, similar to transporter permease protein	YeeE/YedE	Similar to Escherichia coli hypothetical protein YeeE SW:YEEE_ECOLI (P33015) (352 aa) fasta scores: E(): 1.2e-78, 58.62% id in 348 aa, and to Thermotoga maritima conserved hypothetical protein YM0982 TR:Q9X077 (EMBL:AE001760) (332 aa) fasta scores: E(): 3.3e-28, 35.65% id in 345 aa putative membrane protein	Code: R; COG: COG2391 putative transport system permease protein	
ECOLI01953	Inner membrane transport protein yeeF	Putative amino acid transporter protein	Hypothetical transport protein yeeF	Putative amino acid permease	Inner membrane transport protein yeeF	Amino acid permease	Residues 1 to 452 of 452 are 99 pct identical to residues 3 to 454 of a 454 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288519.1 putative amino acid-amine transport protein	Similar to putative amino acid/amine transport protein YeeF of Escherichia coli	IPR002293: Amino acid/polyamine transporter, family I; IPR004841: Amino acid permease-associated region putative APC family, amino acid transport protein	similar to Salmonella typhi CT18 putative amino acid transporter protein putative amino acid transporter protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative amino acid transport protein (APC family)	Putative APC family amino acid transport protein	Code: E; COG: COG0531 putative amino acid/amine transport protein	Code: E; COG: COG0531 putative amino acid/amine transport protein	Code: E; COG: COG0531 putative amino acid/amine transport protein	Hypothetical transport protein YeeF	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: ppu:PP2802 amino acid permease family protein	Putative amino acid transport protein	putative amino acid/amine transport protein Code: E; COG: COG0531	predicted amino acid transporter	Amino acid transporter, APC family protein	hypothetical protein	Amino acid permease-associated region	Putative amino acid transport protein	Putative uncharacterized protein	Amino acid permease	Predicted amino-acid transporter	Amino acid permease	Amino acid permease-associated region	
ECOLI01954	Uncharacterized HTH-type transcriptional regulator yeeY	Putative transcriptional regulator	Hypothetical transcriptional regulator yeeY	Transcriptional regulator, LysR family	Putative transcriptional regulator LYSR-type	Residues 1 to 316 of 334 are 99 pct identical to residues 1 to 316 of a 316 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288520.1 putative transcriptional regulator LYSR-type	putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Putative LysR family transcriptional regulator	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Putative transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family protein	Transcriptional regulator, LysR family	Hypothetical transcriptional regulator YeeY	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: son:SO3318 transcriptional regulator, LysR family	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: she:Shewmr4_1222 transcriptional regulator, LysR family	Transcriptional regulator, LysR family	predicted DNA-binding transcriptional regulator	Putative transcriptional regulator with periplasmic binding protein domain	transcriptional regulator, LysR family KEGG: son:SO3318 transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	PFAM: regulatory protein LysR; LysR substrate-binding KEGG: shn:Shewana3_1223 transcriptional regulator, LysR family transcriptional regulator, LysR family	
ECOLI01955	Protein yeeZ	Vng0267h	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Nucleoside-diphosphate-sugar epimerase	Putative uncharacterized protein	Putative uncharacterized protein STY2279	Alr0480 protein	Hypothetical enzyme of sugar metabolism	Putative enzyme of sugar metabolism	Protein yeeZ	similar to GP:15073254; identified by sequence similarity; putative conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Nucleoside-diphosphate-sugar epimerases	Putative uncharacterized protein VP1153	Protein yeeZ	Putative uncharacterized protein	Nucleoside-diphosphate-sugar epimerase	Residues 1 to 274 of 274 are 99 pct identical to residues 1 to 274 of a 274 aa protein from Escherichia coli O157:H7 ref: NP_310845.1 putative enzyme of sugar metabolism	Putative exported protein	Similar to putative enzyme of sugar metabolism YeeZ of Escherichia coli	
ECOLI01956	Toxin yoeB	Putative uncharacterized protein VV1793	Putative uncharacterized protein	conserved hypothetical protein	Toxin yoeB	Addiction module toxin, Txe/YoeB family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1820	RelE	SCBAC17D6.03, conserved hypothetical protein, len: 84 aa; identical to previously sequenced TR:Q9Z4V8 (EMBL:Y17736) Streptomyces coelicolor hypothetical 10.0 kDa protein, 84 aa and similar to SW:YOEB_ECOLI (EMBL:AE000293) Escherichia coli hypothetical 10.2 kDa protein in sbcB-hisL intergenic region, 84 aa; fasta scores: opt: 354 Z-score: 476.5 bits: 92.5 E(): 5.9e-19; 53.571% identity in 84 aa overlap conserved hypothetical protein	Residues 1 to 84 of 84 are 98 pct identical to residues 1 to 84 of a 84 aa protein YOEB_ECOLI sp: P56605 orf, conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Uncharacterized protein Rv3358/MT3466	Mb3393, -, len: 85 aa. Equivalent to Rv3358, len: 85 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 85 aa overlap). Conserved hypohetical protein, highly similar to other hypohetical proteins e.g.  Q9Z4V8|SCBAC17D6.03 from Streptomyces coelicolor (84 aa), FASTA scores: opt: 393, E(): 1.1e-21, (59.75% identity in 82 aa overlap); P56605|YOEB_ECOLI from Escherichia coli (84 aa), FASTA scores: opt: 305, E(): 2.2e-15, (49.35% identity in 77 aa overlap); Q9Z5W7 PUTATIVE DOC PROTEIN from Francisella novicida (68 aa), FASTA scores: opt: 253, E(): 9.6e-12, (51.6% identity in 62 aa overlap); BAB58569|SAV2407 from Staphylococcus aureus subsp. aureus Mu50 (88 aa), FASTA scores: opt: 250, E(): 2e-11, (40.5% identity in 84 aa overlap); etc. CONSERVED HYPOTHETICAL PROTEIN	conserved hypothetical protein	identified by Glimmer2; putative conserved hypothetical protein	Putative uncharacterized protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2497 conserved hypothetical protein	conserved hypothetical protein	Conserved hypothetical protein	Putative uncharacterized protein	probable translational repressor of toxin-antitoxin stability system RelE-like protein	conserved hypothetical protein	identified by similarity to GB:AAO52832.1; match to protein family HMM PF06769; match to protein family HMM TIGR02116 addiction module toxin Txe	Similar to Escherichia coli hypothetical protein YoeB SW:YOEB_ECOLI (P56605) (84 aa) fasta scores: E(): 6.8e-14, 52.94% id in 85 aa, and to Streptomyces coelicolor hypothetical protein SCBAC17D6.03 TR:Q9Z4V8 (EMBL:Y17736) (84 aa) fasta scores: E(): 1.1e-11, 47.05% id in 85 aa conserved hypothetical protein	Probable toxin of toxin-antitoxin system	Code: S; COG: COG4115 conserved hypothetical protein	
ECOLI01957	Antitoxin yefM	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Antitoxin yefM	Prevent-host-death family protein	Putative uncharacterized protein	Prevent-host-death family protein	Putative YefM protein	RelB	SCBAC17D6.02, conserved hypothetical protein, len: 87 aa; identical to previously sequenced SW:YU1E_STRCO (EMBL:Y17736) Streptomyces coelicolor hypothetical 9.7 kDa protein (ORFU1E), 87 aa and similar to SW:YEFM_ECOLI (EMBL:AE000293) Escherichia coli hypothetical 9.3 kDa protein in sbcB-hisL intergenic region, 83 aa; fasta scores: opt: 250 Z-score: 348.4 bits: 68.9 E(): 8e-12; 51.852% identity in 81 aa overlap. Contains Pfam match to entry PF02604 DUF172, Uncharacterized ACR, COG2161 conserved hypothetical protein	Residues 1 to 83 of 90 are 100 pct identical to residues 1 to 83 of a 83 aa protein YEFM_ECOLI sp: P46147 orf, conserved hypothetical protein	DUF172	Putative uncharacterized protein	Uncharacterized protein Rv3357/MT3465	Mb3392, -, len: 91 aa. Equivalent to Rv3357, len: 91 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 91 aa overlap). Conserved hypothetical protein, highly similar to other hypothetical proteins e.g. Q9Z4V7|YU1E_STRCO (alias CAC37261|SCBAC17D6.02) ORFU1E (BELONGS TO THE PHD/YEFM FAMILY) from Streptomyces coelicolor (87 aa), FASTA scores: opt: 344, E(): 1.9e-17, (62.05% identity in 87 aa overlap); P46147|YEFM_ECOLI|B2017 from Escherichia coli strain K12 (83 aa), FASTA scores: opt: 215, E(): 1.6e-08, (50.0% identity in 72 aa overlap); BAB58570|SAV2408 from Staphylococcus aureus subsp. aureus Mu50 (83 aa), FASTA scores: opt: 161, E(): 8.8e-05, (39.95% identity in 77 aa overlap); Q9Z5W8 PUTATIVE PHD PROTEIN from Francisella novicid (85 aa), FASTA scores: opt: 143, E(): 0.0016, (28.9% identity in 83 aa overlap); etc. Also similar to Rv1247c|MTV006.19c (89 aa) (36.9% identity in 84 aa overlap). SEEMS TO BELONG TO THE PHD/YEFM FAMILY. CONSERVED HYPOTHETICAL PROTEIN	conserved hypothetical protein	Putative uncharacterized protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2498 conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	identified by match to protein family HMM PF02604; match to protein family HMM TIGR01552 prevent-host-death family protein	Similar to Escherichia coli hypothetical protein YefM SW:YEFM_ECOLI (P46147) (83 aa) fasta scores: E(): 3.7e-07, 44.15% id in 77 aa, and to Streptomyces coelicolor hypothetical protein SCBAC17D6.02 SW:YU1E_STRCO (Q9Z4V7) (87 aa) fasta scores: E(): 1.4e-05, 42.66% id in 75 aa conserved hypothetical protein	Code: D; COG: COG2161 conserved hypothetical protein	identified by match to protein family HMM PF02604; match to protein family HMM TIGR01552 addiction module antitoxin, Axe family	similar to gi|49484624|ref|YP_041848.1| [Staphylococcus aureus subsp. aureus MRSA252], percent identity 56 in 83 aa, BLASTP E(): 3e-22 conserved hypothetical protein	Code: D; COG: COG2161 conserved hypothetical protein	Prevent-host-death protein	conserved hypothetical protein identified by match to protein family HMM PF02604; match to protein family HMM TIGR01552	
ECOLI01959	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase;	ATP phosphoribosyltransferase, a hexameric enzyme, catalyzes the first step in histidine biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts; transcription is regulated by general amino acid control. [Source:SGD;Acc:S000000857]	sp|Q99145 Yarrowia lipolytica ATP phosphoribosyltransferase (EC 2.4.2.17), identified start	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase [Source:GeneDB_Spombe;Acc:SPAC25G10.05c]	highly similar to sp|P00498 Saccharomyces cerevisiae YER055c HIS1 ATP phosphoribosyltransferase singleton, start by similarity	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase 1	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	highly similar to uniprot|P00498 Saccharomyces cerevisiae YER055c HIS1;	ATP phosphoribosyltransferase	DEHA2D13772p;similar to uniprot|P00498 Saccharomyces cerevisiae YER055C HIS1 ATP phosphoribosyltransferase;	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	hypothetical ATP phosphoribosyltransferase	ATP phosphoribosyltransferase	
ECOLI01960	Histidinol dehydrogenase	Histidinol dehydrogenase [Source:GeneDB_Spombe;Acc:SPBC1711.13]	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	hypothetical histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	Histidinol dehydrogenase	
ECOLI01961	Histidinol-phosphate aminotransferase	histidinol-phosphate aminotransferase;	Histidinol-phosphate aminotransferase, catalyzes the seventh step in histidine biosynthesis; responsive to general control of amino acid biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts. [Source:SGD;Acc:S000001378]	similar to sp|P36605 Schizosaccharomyces pombe SPBC11B10.02C HIS3 Histidinol-phosphate aminotransferase, hypothetical start	similar to sp|P07172 Saccharomyces cerevisiae YIL116w HIS5 histidinol-phosphate aminotransferase singleton, start by similarity	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase 1	highly similar to uniprot|P07172 Saccharomyces cerevisiae YIL116w HIS5;	DEHA2F05742p;similar to uniprot|P07172 Saccharomyces cerevisiae YIL116W HIS5 Histidinol-phosphate aminotransferase catalyzes the seventh step in histidine biosynthesis;	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase 1	Aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase 2	putative histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	go_component: cell [goid 0005623]; go_function: histidinol-phosphate transaminase activity [goid 0004400]; go_process: histidine biosynthesis [goid 0000105] histidinol-phosphate transaminase, putative	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	Histidinol-phosphate aminotransferase	
ECOLI01962	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	putative imidazoleglycerol-phosphatedehydratase/histidinol- phosphatase	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	Residues 1 to 356 of 356 are 98 pct identical to residues 1 to 356 of a 356 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288527.1 imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase	Histidine biosynthesis bifunctional protein hisB	Histidine biosynthesis bifunctional protein hisB	histidinol-phosphatase/imisazoleglycerol-phosphat e dehydratase	conserved gene histidinol phosphatase and imidazoleglycerol-phosphate dehydratase = bifunctional protein HisB	histidinol-phosphatase/imisazoleglycerol-phosphat e dehydratase	Histidine biosynthesis bifunctional protein hisB	identified by similarity to SP:P06987; match to protein family HMM PF00475; match to protein family HMM TIGR01261; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662 imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase	Histidine biosynthesis bifunctional protein hisB	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark imidazoleglycerolphosphate dehydratase/histidinol-phosphate phosphatase bifunctional enzyme	
ECOLI01963	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH 1	Imidazole glycerol phosphate synthase subunit hisH 2	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH 2	Imidazole glycerol phosphate synthase subunit hisH 2	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH 1	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	Imidazole glycerol phosphate synthase subunit hisH	putative glutamine amidotransferase	Imidazole glycerol phosphate synthase subunit hisH	imidazole glycerol phosphate synthase subunit HisH	
ECOLI01964	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidaz ole-4-carboxamideisomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase	
ECOLI01965	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF1	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	hypothetical hisF protein	Histidine biosynthesis protein HisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF1	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF1	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	Imidazole glycerol phosphate synthase subunit hisF	
ECOLI01966	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Phosphoribosyl-AMP cyclohydrolase/phosphoribosyl- ATP pyrophosphohydrolase	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Phosphoribosyl-ATP pyrophosphohydrolase	putative phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein [includes: phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase	Histidine biosynthesis bifunctional protein	Histidine biosynthesis bifunctional protein hisIE	Histidine biosynthesis bifunctional protein hisIE	phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase	
ECOLI01967	Chain length determinant protein	Polysaccharide chain length regulator	Chain length determinant protein	Regulator of length of O-antigen component of lipopolysaccharide chains	Residues 1 to 337 of 337 are 98 pct identical to residues 1 to 337 of a 337 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288532.1 regulator of length of O-antigen component of lipopolysaccharide chains	regulator of length of O-antigen component of lipopolysaccharide chains	similar to Salmonella typhi Ty2 polysaccharide chain length regulator polysaccharide chain length regulator	Hypothetical protein	Chain length determinant protein	Code: M; COG: COG3765 regulator of length of O-antigen component of lipopolysaccharide chains	Code: M; COG: COG3765 regulator of length of O-antigen component of lipopolysaccharide chains	Code: M; COG: COG3765 regulator of length of O-antigen component of lipopolysaccharide chains	Chain length determinant protein	Regulator of length of O-antigen component of lipopolysaccharide chains	O-antigen chain length regulator protein (Wzz) Evidence 2b : Function of strongly homologous gene; PubMedId : 12057956; Product type r : regulator	regulator of length of O-antigen component of lipopolysaccharide chains Code: M; COG: COG3765	regulator of length of O-antigen component of lipopolysaccharide chains	Lipopolysaccharide biosynthesis protein	Putative uncharacterized protein	Chain length determinant protein	Wzz	Lipopolysaccharide biosynthesis protein precursor	Regulator of length of O-antigen component of lipopolysaccharide chains	Lipopolysaccharide biosynthesis protein	Chain length determinant protein	Putative uncharacterized protein	Wzz-like protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI01968	UDP-glucose 6-dehydrogenase	Putative uncharacterized protein	UDP-glucose 6-dehydrogenase	Predicted UDP-glucose 6-dehydrogenase	UDP-glucose 6-dehydrogenase	Predicted UDP-glucose 6-dehydrogenase	UDP-glucose 6-dehydrogenase	UDP-glucose 6-dehydrogenase	UDP-glucose 6-dehydrogenase	UDP-glucose 6-dehydrogenase	Nucleotide sugar dehydrogenase	UDP-glucose 6-dehydrogenase	Nucleotide sugar dehydrogenase	Predicted UDP-glucose 6-dehydrogenase	similar to Escherichia coli K12 UDP-glucose 6-dehydrogenase gi: 1788340 (389 aa). BLAST with identity of 96% in 373 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	UDP-glucose/GDP-mannose dehydrogenase family	UDP-glucose/GDP-mannose dehydrogenase	similar to Salmonella typhi Ty2 UDP-glucose 6-dehydrogenase UDP-glucose 6-dehydrogenase	UDP-glucose dehydrogenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme UDP-glucose 6-dehydrogenase	The type 2 capsule locus of Streptococcus pneumoniae	hypothetical protein	UDP-glucose 6-dehydrogenase	UDP-glucose 6-dehydrogenase	identified by similarity to SP:P76373; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721 UDP-glucose 6-dehydrogenase	Code: M; COG: COG1004 UDP-glucose 6-dehydrogenase	similar to gi|45533027|ref|ZP_00184022.1| [Exiguobacterium sp. 255-15], percent identity 62 in 330 aa, BLASTP E(): e-116 putative UDP-glucose 6-dehydrogenase	Evidence 2b : Function of strongly homologous gene; PubMedId : 9383197; Product type e : enzyme UDP-glucose 6-dehydrogenase	Code: M; COG: COG1004 UDP-glucose 6-dehydrogenase	
ECOLI01969	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase;	highly similar to sp|P38720 Saccharomyces cerevisiae YHR183w GND1 6-phosphogluconate dehydrogenase P2.360.f2.1 or sp|P53319 Saccharomyces cerevisiae YGR256w GND2 phosphogluconate dehydrogenase P2.360.f2.1, hypothetical start	6-phosphogluconate dehydrogenase, decarboxylating [Source:GeneDB_Spombe;Acc:SPBC660.16]	gi|28565046|gb|AAO32606.1 Kluyveromyces lactis GND1, start by similarity	6-phosphogluconate dehydrogenase, decarboxylating, putative	6-phosphogluconate dehydrogenase, decarboxylating	6-PHOSPHOGLUCONATE DEHYDROGENASE;05_0860, 6-PHOSPHOGLUCONATE DEHYDROGENASE, 6PGD_SALTY, gene found by Glimmer;	6-phosphogluconate dehydrogenase, decarboxylating	highly similar to uniprot|P38720 Saccharomyces cerevisiae YHR183w GND1 6-phosphogluconate dehydrogenase;	DEHA2D06160p;highly similar to uniprot|P38720 Saccharomyces cerevisiae YHR183W GND1 6-phosphogluconate dehydrogenase or uniprot|P53319 Saccharomyces cerevisiae YGR256W GND2 6- phosphogluconate dehydrogenase,;	similar to SP:P29716, SP:P37074,  and GB:X63355; identified by sequence similarity; putative 6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	6-phosphogluconate dehydrogenase, decarboxylating	

ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	

ECOLI01970	Uncharacterized protein yefI	hypothetical protein, similar to glucose transferase/glycosyltransferase	glycosyl transferase, group 1	Putative uncharacterized protein	Lipopolysaccharide biosynthesis protein	Glycosyl transferase group 1	Putative glycosyl transferase	Glycosyl transferase group 1	Lipopolysaccharide biosynthesis protein	Exopolysacharide protein glycosyl transferase WelG	Glycosyl transferase group 1	
ECOLI01971	Putative lipopolysaccharide biosynthesis O-acetyl transferase wbbJ	Putative galactoside acetyltransferase	exopolysaccharide biosynthesis protein, acetyltransferase	Putative uncharacterized protein	Transferase	Similar to previously sequenced Bacteroides fragilis putative acetyl transferase WcfD SWALL:Q9XDK0 (EMBL:AF048749) (218 aa) fasta scores: E(): 2.5e-87, 100% id in 218 aa, and to Aeromonas hydrophila acetyl transferase SWALL:Q8KXE9 (EMBL:AF343089) (199 aa) fasta scores: E(): 5.1e-21, 45.34% id in 161 aa, and to Aeromonas hydrophila O-acetyl transferase SWALL:Q8KNM6 (EMBL:AF148126) (199 aa) fasta scores: E(): 6e-21, 45.34% id in 161 aa putative acetyltransferase	similar to galactoside O-acetyltransferase	transferase hexapeptide repeat	transferase hexapeptide protein	Acetyltransferase (isoleucine patch superfamily)-like	transferase hexapeptide repeat containing protein PFAM: transferase hexapeptide repeat containing protein KEGG: pfl:PFL_5101 O-acetyltransferase, putative	Transferase hexapeptide repeat containing protein	Putative acetyltransferase	Transferase hexapeptide repeat containing protein	Putative uncharacterized protein	Transferase hexapeptide repeat containing protein	Acetyltransferase (Isoleucine patch superfamily)- like protein	Predicted acyl transferase	Transferase hexapeptide repeat containing protein	Acetyltransferase (Isoleucine patch superfamily)- like protein	Transferase hexapeptide repeat containing protein	Nodulation protein L, putative	Putative lipopolysaccharide biosynthesis O-acetyl transferase	Transferase hexapeptide repeat containing protein	Acetyltransferase, CysE/LacA/LpxA/NodL family	Bacterial transferase, hexapeptide repeat family	Putative acyl transferase	Acetyltransferase (Isoleucine patch superfamily)- like protein	Predicted acyl transferase	
ECOLI01972	Uncharacterized protein yefG	identified by Glimmer2; putative conserved hypothetical protein	identified by similarity to PIR:B95206 conserved hypothetical protein	Galactofuranosyltransferase	Glycosyltransferase	Glycosyltransferase	Glycosyltransferase	Putative galactofuranose transferase	Nucleotide sugar synthetase-like protein, putative	Glycosyltransferase	Galactofuranosyltransferase	Nucleotide sugar synthetase-like protein	conserved hypothetical protein	Conserved protein	Glycosyltransferase	Glycosyltransferase	Nss	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Glycosyl transferase,galactofuranosyltransferase	
ECOLI01973	O-antigen polymerase	hypothetical protein	O-antigen polymerase	Putative uncharacterized protein	O-antigen polymerase	
ECOLI01974	UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	Probable UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	Putative UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	Putative UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	similar to AX065129-1|CAC25804.1| percent identity: 85 in 401 aa putative UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	UDP-galactopyranose mutase	Glf	UDP-galactopyranose mutase	UDP-GALACTOPYRANOSE MUTASE GLF	Mb3839c, glf, len: 399 aa. Equivalent to Rv3809c, len: 399 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 399 aa overlap). glf (alternate gene name: ceoA), UDP-galactopyranose mutase (EC 5.4.99.9) (see citations below), identical to previously sequenced gene, and equivalent to Q9CDB8|GLF|ML0092 PUTATIVE UDP-GALACTOPYRANOSE MUTASE from Mycobacterium leprae (413 aa), FASTA scores: opt: 2347, E(): 1.3e-140, (86.6% identity in 396 aa overlap). Also highly similar to others e.g. AAK61905|EPSJ UDP-GALACTOPYRANOSE MUTASE (PROTEIN INVOLVED IN EXOPOLYSACCHARIDES BIOSYNTHESIS) from Streptococcus thermophilus (365 aa), FASTA scores: opt: 972, E(): 5.9e-54, (45.85% identity in 375 aa overlap); P37747|GLF_ECOLI|B2036 UDP-GALACTOPYRANOSE MUTASE from Escherichia coli strain K12 (367 aa), FASTA scores: opt: 958, E(): 4.5e-53, (43.55% identity in 379 aa overlap); O86897|CAP33FN from Streptococcus pneumoniae (369 aa) FASTA scores: opt: 954, E(): 8.1e-53, (44.8% identity in 375 aa overlap); etc. COFACTOR: FAD (BY SIMILARITY).  N-TERMINAL SHOWS SIMILARITY TO FAD OR NAD CONTAINING PROTEINS. UDP-GALACTOPYRANOSE MUTASE GLF (UDP-GALP MUTASE) (NAD+-FLAVIN ADENINE DINUCLEOTIDE-REQUIRING ENZYME)	UDP-galactopyranose mutase	similar to Salmonella typhi CT18 UDP-galactopyranose mutase UDP-galactopyranose mutase	UDP-galactopyranose mutase	
ECOLI01975	Putative O-antigen transporter	O-antigen transporter RfbX, putative	Alr2857 protein	Polysaccharide synthase family protein	Putative flippase	Putative polysaccharide biosynthesis protein	Hypothetical protein	Flippase Wzx	Transporter	O-antigen transporter	Polysaccharide biosynthesis family protein	Putative uncharacterized protein	pseudo	Repeat unit transporter	oligosaccharide repeat unit transporter	Putative O-antigen transporter	Putative uncharacterized protein gbs1482	identified by match to PFAM protein family HMM PF01943 polysaccharide biosynthesis protein	flippase oligosaccharide translocase	Membrane protein involved in the export of O-antigen and teichoic acid RfbX protein	identified by similarity to SP:P37746; match to protein family HMM PF01943 polysaccharide biosynthesis protein	identified by match to protein family HMM PF01943 polysaccharide biosynthesis protein	Putative teichoic acid/polysaccharide export protein	O-antigen flippase	predicted polysaccharide biosynthesis protein pfam01943	Polysaccharide biosynthesis protein	Code: R; COG: COG2244 putative O-antigen transporter	polysaccharide biosynthesis protein PFAM: polysaccharide biosynthesis protein: (9.1e-22) KEGG: ava:Ava_1044 polysaccharide biosynthesis protein, ev=5e-17, 24% identity	Polysaccharide biosynthesis protein	
ECOLI01976	dTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	dTDP-4-dehydrorhamnose 3,5-epimerase	dTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	188aa long hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase	NDP-sugar epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	RfbC dTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	dTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase	dTDP-4-dehydrorhamnose 3,5-epimerase	Putative dTDP-4-dehydrorhamnose 3,5-epimerase	DTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase	DTDP-4-dehydrorhamnose 3,5-epimerase	dTDP-rhamnose-3,5-epimerase	dTDP-4-dehydrorhamnose 3,5-epimerase	dTDP-4-dehydrorhamnose 3,5-epimerase	Probable dTDP-4-keto-6-deoxy-D-glucose-3,5- epimerase	Lmo1082 protein	dTDP-4-dehydrorhamnose 3,5-epimerase	dTDP-4-dehydrorhamnose 3,5-epimerase	dTDP-4-dehydrorhamnose 3,5-epimerase	
ECOLI01977	Glucose-1-phosphate thymidylyltransferase 1	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Product confidence : putative putative glucose-1-phosphate thymidyltransferase protein	Glucose-1-phosphate thymidylyltransferase	Putative glucose-1-phosphate thymidyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Residues 1 to 292 of 292 are 100 pct identical to residues 1 to 292 of a 292 aa protein from Shigella flexneri (strain 2a) pir: D55213 rfbA protein	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	glucose 1-phosphate thymidyltransferase	Glucose-1-phosphate thymidylyltransferase	similar to Salmonella typhi CT18 TDP-glucose pyrophosphorylase TDP-glucose pyrophosphorylase	Glucose-1-phosphate thymidylyltransferase	identified by match to PFAM protein family HMM PF00483 glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	
ECOLI01978	dTDP-4-dehydrorhamnose reductase	DTDP-4-dehydrorhamnose reductase	dTDP-4-dehydrorhamnose reductase	DTDP-4-dehydrorhamnose reductase	dTDP-6-deoxy-L-mannose-dehydrogenase	dTDP-4-dehydrorhamnose reductase	DTDP-4-dehydrorhamnose reductase	290aa long hypothetical dTDP-4-dehydrorhamnose reductase	dTDP-4-dehydrorhamnose reductase	Putative dTDP-4-dehydrorhamnose reductase	DTDP 4-dehydrorhamnose reductase	DTDP-4-dehydrorhamnose reductase	DTDP-4-dehydrorhamnose reductase	dTDP-4-dehydrorhamnose reductase	Putative dTDP-L-rhamnose synthase	dTDP-4-dehydrorhamnose reductase	DTDP-4-dehydrorhamnose reductase	dTDP-4-dehydrorhamnose reductase	dTDP-4-dehydrorhamnose reductase	dTDP-6-deoxy-L-mannose-dehydrogenase	dTDP-4-dehydrorhamnose reductase	Probable dTDP-4-rhamnose reductase	Lmo1084 protein	Putative dTDP-4-dehydrorhamnose reductase	DTDP-4-dehydrorhamnose reductase	DTDP-4-dehydrorhamnose reductase	dTDP-4-dehydrorhamnose reductase	identified by match to protein family HMM PF04321; match to protein family HMM TIGR01214 dTDP-4-dehydrorhamnose reductase	dTDP-4-dehydrorhamnose reductase	
ECOLI01979	dTDP-glucose 4,6-dehydratase	DTDP-glucose 4,6-dehydratase	DTDP-glucose 4,6-dehydratase	DTDP-glucose 4,6-dehydratase	336aa long hypothetical dTDP-glucose 4,6- dehydratase	DTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	RfbB dTDP-glucose 4,6-dehydratase	hypothetical dTDP-glucose 4,6-dehydratase	DTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	identified by match to protein family HMM PF01370; match to protein family HMM TIGR01181 dTDP-glucose 4,6-dehydratase	DTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	Residues 1 to 361 of 361 are 99 pct identical to residues 1 to 361 of a 361 aa protein RFBB_SHIFL sp: P37777 DTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	
ECOLI01980	UTP--glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridylyltransferase	Glucose-1-phosphate thymidylyltransferase, putative	UTP--glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	identified by similarity to SP:Q05852; match to protein family HMM PF00483; match to protein family HMM TIGR01099 UTP-glucose-1-phosphate uridylyltransferase	Putative UTP--glucose-1-phosphate uridylyltransferase	Putative UTP--glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UDPglucose pyrophosphorylase protein	Putative UTP--glucose-1-phosphate uridylyltransferase	mannose-1-phosphate guanylyltransferase	UTP-glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UDP-glucose pyrophosphorylase	Residues 5 to 301 of 301 are 99 pct identical to residues 1 to 297 of a 297 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288547.1 homolog of Salmonella UTP--glucose-1-P uridyltransferase, probably a UDP-gal transferase	ADP-glucose pyrophosphorylase	UTP--glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridylyltransferase protein	UTP-glucose-1-phosphate uridylyltransferase	putative glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase), non-catalytic subunit	UTP-glucose-1-phosphate uridylyltransferase	UTP-glucose-1-phosphate uridyltransferase	UTP--glucose-1-phosphate uridylyltransferase	UDP-glucose pyrophosphorylase EpsT	
ECOLI01981	Colanic acid biosynthesis protein wcaM	Colanic acid biosynthesis protein wcaM	Putative uncharacterized protein wcaM	Residues 1 to 464 of 464 are 96 pct identical to residues 1 to 464 of a 464 aa protein from Escherichia coli O157:H7 ref: NP_310875.1 orf, conserved hypothetical protein	putative colanic acid biosynthesis protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Colanic acid biosynthesis protein wcaM	conserved hypothetical protein	Colanic acid biosynthesis protein WcaM	Putative colanic acid biosynthetic protein WcaM	putative colanic acid biosynthesis protein	Putative colanic acid biosynthesis protein precursor	Colanic acid biosynthesis protein WcaM	Predicted colanic acid biosynthesis protein	Putative uncharacterized protein precursor	Colanic acid biosynthesis protein WcaM	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Colanic acid biosynthesis protein WcaM	Putative exported protein	Colanic acid biosynthesis protein WcaM	Colanic acid biosynthesis protein WcaM	Colanic acid biosynthesis protein WcaM	Putative exported protein	Colanic acid biosynthesis protein WcaM	Colanic acid biosynthesis protein WcaM	Colanic acid biosynthesis protein WcaM	Putative exported protein	
ECOLI01982	Putative colanic acid biosynthesis glycosyltransferase wcaL	Putative glycosyltransferase	Putative uncharacterized protein	Putative glycosyltransferase	Hypothetical protein	Putative colanic acid biosynthesis glycosyl transferase wcaL	Polysaccharide biosynthesis protein, putative	Product confidence : putative putative glycosyltransferase protein	probable glycosyltransferase	Putative glycosyl transferase	Putative colanic acid biosynthesis glycosyl transferase	CDS_ID OB2890 galacturonosyl transferase	similar to AL355913-5|CAB91117.1| percent identity: 48 in 375 aa putative glycosyl transferase	glycosyltransferase, RedB [Sinorhizobium meliloti] megaplasmid 2	Residues 1 to 379 of 379 are 97 pct identical to residues 28 to 406 of a 406 aa protein from Escherichia coli K12 ref: NP_416548.1 putative colanic acid biosynthesis glycosyl transferase	Complete genome; segment 12/17	COG0438 Glycosyltransferase galactosyltransferase	putative glycosyl transferase in colanic acid gene cluster	similar to Salmonella typhimurium putative glycosyl transferase in colanic acid gene cluster putative glycosyl transferase in colanic acid gene cluster	Glycosyl transferase, group 1	Putative colanic acid biosynthesis glycosyl transferase	Glycosyl transferase, group 1 family protein	Putative colanic acid biosynthesis glycosyltransferase wcaL	Code: M; COG: COG0438 putative colanic acid biosynthesis glycosyl transferase	glycosyl transferase, group 1	Glycosyl transferase, group 1	glycosyl transferase, group 1 family protein, putative identified by match to protein family HMM PF00534	amylovoran biosynthesis glycosyl transferase AmsK	
ECOLI01983	Colanic acid biosynthesis protein wcaK	Putative galactokinase	Residues 1 to 426 of 426 are 98 pct identical to residues 1 to 426 of a 426 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288551.1 putative galactokinase	putative galactokinase in colanic acid gene cluster	Putative galactokinase	Code: S; COG: COG2327 putative galactokinase	amylovoran biosynthesis protein AmsJ	Colanic acid biosynthesis protein WcaK	polysaccharide pyruvyl transferase	Putative galactokinase	polysaccharide pyruvyl transferase PFAM: polysaccharide pyruvyl transferase KEGG: mth:MTH340 hypothetical protein	Hypothetical protein	putative galactokinase Code: S; COG: COG2327	Putative pyruvyl-transferase	colanic acid biosynthesis protein	Polysaccharide pyruvyl transferase	Polysaccharide pyruvyl transferase	Polysaccharide pyruvyl transferase	Colanic acid biosynthesis protein WcaK	Predicted pyruvyl transferase	Polysaccharide pyruvyl transferase	Colanic acid biosynthesis protein WcaK	Putative uncharacterized protein	Putative uncharacterized protein	Polysaccharide pyruvyl transferase	Putative uncharacterized protein	Polysaccharide pyruvyl transferase	Putative uncharacterized protein	Putative polysaccharide pyruvyl transferase	
ECOLI01984	Lipopolysaccharide biosynthesis protein wzxC	GumJ protein	GumJ protein	Polysaccharide biosynthesis protein	Putative transmembrane transport protein	Membrane protein involved in the export of O- antigen and teichoic acid	Lipopolysaccharide biosynthesis protein wzxC	probable export protein	Polysaccharide export protein, putative	Polysaccharide biosynthesis domain protein	Polysaccharide biosynthesis protein	Product confidence : probable Gene name confidence : putative putative PST type surface saccharide translocase, similar to ExoT protein	Probable export protein	probable succinoglycan transport protein	Possible polysaccharide export protein	Residues 1 to 492 of 492 are 98 pct identical to residues 1 to 492 of a 492 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288552.1 probable export protein	Polysaccharide biosynthesis protein	GumJ protein	InterProMatches:IPR002797; biosynthesis of teichuronic acid, Biological Process: polysaccharide biosynthesis (GO:0000271), Cellular Component: membrane (GO:0016020) TuaB	hypothetical protein	Polysaccharide biosynthesis export protein	putative export protein in colanic acid gene cluster	similar to Salmonella typhi CT18 putative transmembrane transport protein putative transmembrane transport protein	GumJ protein	Putative export protein	GumJ protein	Code: R; COG: COG2244 probable export protein	Polysaccharide biosynthesis protein	conserved hypothetical membrane protein	
ECOLI01985	Putative colanic biosynthesis UDP-glucose lipid carrier transferase	GumD protein	Glycosyltransferase	Putative colanic biosynthesis UDP-glucose lipid carrier transferase	Polysaccharide biosynthesis glycosyltransferase	Putative extracellular polysaccharide biosynthesis protein	Glycosyltransferase	Putative sugar transferase	Putative colanic biosynthesis UDP-glucose lipid carrier transferase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE SUGAR TRANSFERASE PROTEIN	Capsular polysaccharide biosynthesis protein	probable glycosyl transferase	Polysaccharide biosynthesis glycosyltransferase, putative	Putative colanic acid biosynthsis UDP-glucose lipid carrier transferase	probable glycosyl transferase	SCF62.07, possible glycosyl transferase, len: 491 aa. Similar to many other glycosyl transferases e.g.  Erwinia amylovora SW: AMSG_ERWAM (EMBL; X77921) UDP-galactose-lipid carrier transferase (EC 2.-.-.-) (477 aa), fasta scores opt: 599 z-score: 695.6 E(): 2.2e-31 33.0% identity in 403 aa overlap. Contains multiple possible membrane spanning hydrophobic domains putative glycosyl transferase	UDP-glucosyltransferase	Residues 1 to 464 of 464 are 99 pct identical to residues 1 to 464 of a 464 aa protein from Escherichia coli K12 ref: NP_416551.1 putative colanic acid biosynthsis UDP-glucose lipid carrier transferase	probable glycosyltransferase	Putative uncharacterized protein	Glycosyltransferase protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark GumD	putative UDP-glucose lipid carrier transferase/glucose-1-phosphate transferase in colanic acid gene cluster	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative UDP-glucose lipid carrier transferase/glucose-1-phosphate transferase in colanic acid gene cluster (WcaJ)	Similar to Vibrio parahaemolyticus CpsA SWALL:AAO61842 (EMBL:AY217749) (466 aa) fasta scores: E(): 1e-49, 38.94% id in 380 aa, and to Escherichia coli putative colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ or B2047 SWALL:WCAJ_ECOLI (SWALL:P71241) (464 aa) fasta scores: E(): 5.6e-46, 35.01% id in 457 aa putative EPS related membrane protein	Putative UDP-glucose lipid carrier transferase	colanic biosynthesis UDP-glucose lipid carrier transferase	GumD protein	identified by match to protein family HMM PF02397 capsular polysaccharide biosynthesis protein	
ECOLI01986	Phosphomannomutase	Phosphoglucomutase	Phosphohexose mutases	Putative phosphomannomutase	Phosphomannomutase	Probable phosphomannomutase	Phosphomannomutase	Putative phosphomannomutase	Phosphomannomutase	Phosphomannomutase	Putative phosphomannomutase	Putative phosphomannomutase	similar to AX064911-1|CAC25695.1| percent identity: 84 in 458 aa putative phosphomannomutase	Phosphoglucomutase	SCE34.09c, manB, phosphomannomutase, len: 454 aa; similar to SW:XANA_XANCP (EMBL:M83231) Xanthomonas campestris phosphoglucomutase/phosphomannomutase [includes: phosphoglucomutase(EC 5.4.2.2) (glucose phosphomutase) (PGM); phosphomannomutase (EC 5.4.2.8) (PMM)] XanA, 448 aa; fasta scores: opt: 1096 z-score: 1203.0 E(): 0; 42.0% identity in 443 aa overlap. Contains Pfam match to entry PF00408 PGM_PMM, Phosphoglucomutase/phosphomannomutase phosphomannomutase	Phosphomannomutase	Residues 17 to 472 of 472 are 99 pct identical to residues 1 to 456 of a 456 aa protein from Escherichia coli K12 ref: NP_416552.1 phosphomannomutase	Phosphomannomutase	Phosphoglucomutase/phosphomannomutase	PmmA	PROBABLE PHOSPHOMANNOMUTASE PMMA	Mb3285c, manB, len: 465 aa. Equivalent to Rv3257c, len: 465 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 465 aa overlap). Probable manB, phosphomannomutase (EC 5.4.2.8) (see citation below), equivalent to Q9CCJ7|PMMA|ML0763 from Mycobacterium leprae (468 aa), FASTA scores: opt: 2533, E(): 2e-145, (83.1% identity in 468 aa overlap). Also similar to many e.g.  Q9KZL6|MANB from Streptomyces coelicolor (454 aa), FASTA scores: opt: 1820, E(): 2e-102, (63.2% identity in 459 aa overlap); Q9PGN8|XF0260 from Xylella fastidiosa (500 aa), FASTA scores: opt: 1085, E(): 4.7e-58, (40.7% identity in 462 aa overlap); Q9EY19|MANB from Salmonella enterica subsp. arizonae (456 aa), FASTA scores: opt: 988, E(): 3.1e-52, (38.65% identity in 445 aa overlap); etc. BELONGS TO THE PHOSPHOHEXOSE MUTASES FAMILY. Note that previously known as pmmA. PROBABLE PHOSPHOMANNOMUTASE MANB (PMM) (PHOSPHOMANNOSE MUTASE)	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark phosphoglucomutase; phosphomannomutase	IPR005841: Phosphoglucomutase/phosphomannomutase phosphomannomutase in colanic acid gene cluster	similar to Salmonella typhi Ty2 phosphomannomutase phosphomannomutase	Phosphoglucomutase	Phosphomannomutase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme bifunctional protein [Includes: phosphomannomutase (Pmm); putative phosphoglucomutase (Glucose phosphomutase) (Pgm)]	Phosphomannomutase CpsG protein	
ECOLI01987	Mannose-1-phosphate guanylyltransferase	Xanthan biosynthesis protein xanB	Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase	Mannose-6-phosphate isomerase/mannose-1-phosphate guanyl transferase	GDP-mannose pyrophosphorylase	GDP-mannose pyrophosphorylase	Mannose-1-phosphate guanylyltransferase	Alginate biosynthesis protein algA	Mannose-1-phosphate guanylyltransferase	Mannose-1-phosphate guanylyltransferase	Mannose-1-phosphate guanylyltransferase	Mannose-1-phosphate guanylyltransferase	GDP-mannose pyrophosphorylase	Probable mannose-1-phosphate guanylyltransferase	Putative GDP-mannose pyrophosphorylase	Putative mannose-6-phosphate isomerase	Mannose-1-phosphate guanylyltransferase	mannose-1-phosphate guanylyltransferase	similar to SP:P06187, GB:K03551, GB:X52093, PID:154137, PID:47739, SP:P06187, GB:K03551, GB:X52093, PID:154137, and PID:47739; identified by sequence similarity; putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	Putative mannose-1-phosphate guanylyltransferase	Mannose-1-phosphate guanylyltransferase	mannose-6-phosphate isomerase (phosphomannose isomerase) ; mannose-1-phosphate guanylyl transferase (GDP-mannose pyrophosphorylase)	Putative GDP-mannose pyrophosphorylase ManC	Mannose-1-phosphate guanylyltransferase	MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE	Mannose-1-phosphate guanylyltransferase 1	Putative mannose-1-phosphate guanylyltransferase	Mannose-1-phosphate guanylyltransferase	Mannose-1-phosphate guanylyltransferase	
ECOLI01988	Putative colanic acid biosynthesis glycosyl transferase wcaI	Putative glycosyltransferase	Glycosyltransferase, group 1 family	Putative colanic acid biosynthesis glycosyl transferase wcaI	glycosyltransferase	Putative glycosyltransferase	Putative colanic biosynthesis glycosyl transferase	Residues 1 to 407 of 407 are 99 pct identical to residues 1 to 407 of a 407 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288556.1 putative colanic biosynthesis glycosyl transferase	Probable glycosyltransferase	putative glycosyl transferase in colanic acid biosynthesis	similar to Salmonella typhi CT18 putative glycosyltransferase putative glycosyltransferase	Putative glycosyl transferase	Glycosyltransferase	glycosyl transferase, group 1	Code: M; COG: COG0438 putative colanic biosynthesis glycosyl transferase	Glycosyl transferase, group 1	glycosyl transferase, group 1	Putative colanic acid biosynthesis glycosyl transferase WcaI	hypothetical protein similarity to COG0438 Predicted glycosyltransferases(Evalue: 6E-46)	Glycosyl transferase, group 1	glycosyl transferase, group 1	Putative colanic biosynthesis glycosyl transferase	glycosyltransferase	putative glycosyl transferase in colanic acid biosynthesis COG0438 Glycosyltransferase	a-glycosyltransferase-related protein, glycosyltransferase family 4 protein	glycosyl transferase, group 1 PFAM: glycosyl transferase, group 1 KEGG: ava:Ava_0736 glycosyl transferase, group 1	Putative glycosyl transferase	putative colanic biosynthesis glycosyl transferase Code: M; COG: COG0438	Glycosyl transferase, group 1	
ECOLI01989	GDP-mannose mannosyl hydrolase	Putative GDP-mannose mannosylhydrolase	GDP-mannose mannosyl hydrolase	GDP-mannose mannosyl hydrolase	GDP-mannose mannosyl hydrolase	GDP-mannose mannosyl hydrolase	Residues 1 to 160 of 160 are 100 pct identical to residues 1 to 160 of a 160 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288557.1 GDP-mannose mannosyl hydrolase	putative glycosyl transferase in colanic acid biosynthesis	similar to Salmonella typhi CT18 putative O-antigen biosynthesis protein putative O-antigen biosynthesis protein	GDP-mannose mannosyl hydrolase	Code: LR; COG: COG0494 GDP-mannose mannosyl hydrolase	GDP-mannose mannosyl hydrolase	Code: LR; COG: COG0494 GDP-mannose mannosyl hydrolase	GDP-mannose mannosyl hydrolase	Mannose-1-phosphate guanylyltransferase	Hypothetical protein COG1051 ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NUDIX hydrolase	GDP-mannose mannosyl hydrolase identified by match to protein family HMM PF00293	GDP-mannose mannosyl hydrolase Code: LR; COG: COG0494	GDP-mannose mannosyl hydrolase PFAM: NUDIX hydrolase KEGG: ecp:ECP_2091 GDP-mannose mannosyl hydrolase	GDP-mannose mannosyl hydrolase	NUDIX hydrolase	NUDIX hydrolase	Putative uncharacterized protein	GDP-mannose mannosyl hydrolase	GDP-mannose mannosyl hydrolase	NUDIX hydrolase	GDP-mannose mannosyl hydrolase	Putative uncharacterized protein	
ECOLI01990	GDP-L-fucose synthetase	GDP-fucose synthetase	GDP-fucose synthetase	GDP-fucose synthase, putative	Sll1213 protein	GDP-fucose synthetase	Putative fucose synthetase	GDP-L-fucose synthetase	Putative nucleotide di-P-sugar epimerase or dehydratase	GDP-fucose synthetase	GDP-fucose synthetase	dTDP-glucose dehydratase	Probable GDP-L-fucose synthetase	GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4- reductase	GDP-fucose synthetase	GDP-fucose synthetase	PMID: 9862812 best DB hits: BLAST: pdb:1BWS; A Chain A, Crystal Structure Of; E=8e-90 gb:AAG57112.1; AE005431_4 (AE005431) putative nucleotide; E=2e-89 pir:D55239; cpsB 5'-region hypothetical protein 2 - Escherichia coli; E=2e-89 COG: wcaG; COG0451 Nucleoside-diphosphate-sugar epimerases; E=2e-90 Cj1131c; COG1087 UDP-glucose 4-epimerase; E=2e-11 slr0583; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-11 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=0.071 GDP-fucose synthetase	Nodulation protein	GDP-fucose synthetase	similar to GDP-fucose synthetase	Putative nucleotide di-P-sugar epimerase or dehydratase	GDP-L-fucose synthetase(Nodulation protein NolK)	GDP-L-fucose synthase	Nucleoside-diphosphate-sugar epimerase	Gdp-l-fucose synthetase	Residues 1 to 321 of 322 are 98 pct identical to residues 1 to 321 of a 321 aa protein from Escherichia coli K12 ref: NP_416556.1 putative nucleotide di-P-sugar epimerase or dehydratase	GDP-fucose synthetase NAD dependent epimerase/dehydratase	NAD dependent epimerase/dehydratase	identified by similarity to SP:P32055 GDP-L-fucose synthetase	
ECOLI01991	GDP-mannose 4,6-dehydratase	GDP-mannose 4,6-dehydratase, putative	GDP-D-mannose dehydratase	GDP-D-mannose dehydratase	GDP-mannose 4,6-dehydratase	GDP-D-mannose dehydratase	GDP-D-mannose 4, 6-dehydratase	GDPmannose 4,6-dehydratase	GDP-mannose-4,6-dehydratase	Probable GDP-mannose 4,6 dehydratase	GDP-mannose 4,6-dehydratase	GDP-D-mannose dehydratase	Probable GDP-mannose-4,6-dehydratase	GDP-mannose 4,6-dehydratase	GDP-mannose 4,6-dehydratase	Probable GDP-mannose 4,6-dehydratase	PMID: 10718197 best DB hits: BLAST: gb:AAD10232.1; (U72147) putative GDP-D-mannose dehydratase; E=1e-112 pir:S74433; GDP-D-mannose dehydratase 1 - Synechocystis sp. (strain; E=1e-111 gb:AAD43839.1; AF076290_9 (AF076290) putative GDP-D-mannose; E=1e-102 COG: sll1212; COG1089 GDP-D-mannose dehydratase; E=1e-112 Cj1319; COG0451 Nucleoside-diphosphate-sugar epimerases; E=9e-14 Rv0112; COG1089 GDP-D-mannose dehydratase; E=1e-13 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=1.3e-14 GDP-mannose 4,6 dehydratase	GDP-mannose 4,6-dehydratase	GDP-D-mannose dehydratase	GDP-mannose 4,6-dehydratase	GDP-D-mannose dehydratase	GDP-mannose 4,6-dehydratase	Residues 1 to 373 of 373 are 100 pct identical to residues 1 to 373 of a 373 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288559.1 GDP-D-mannose dehydratase	GDP-D-mannose dehydratase	GmdA	GDP-D-mannose dehydratase gmdA	IPR002198: Short-chain dehydrogenase/reductase SDR GDP-D-mannose dehydratase in colanic acid gene cluster	similar to Salmonella typhi CT18 GDP-mannose 4,6-dehydratase GDP-mannose 4,6-dehydratase	GDP-D-mannose dehydratase	
ECOLI01992	Putative colanic acid biosynthesis acetyltransferase wcaF	Slr1084 protein	Acetyltransferase	Putative acetyltransferase	Alr3178 protein	Putative colanic acid biosynthesis acetyltransferase wcaF	similar to GP:5478235; identified by sequence similarity; putative acetyltransferase, CysE/LacA/LpxA/NodL family	Acetyltransferase, CysE/LacA/LpxA/NodL family	PMID: 8759852 best DB hits: BLAST: gb:AAG24812.1; (AF285085) putative acetyl transferase [Salmonella; E=2e-29 gb:AAG57114.1; AE005431_6 (AE005431) putative transferase; E=4e-29 swissprot:P71240; WCAF_ECOLI PUTATIVE COLANIC ACID BIOSYNTHESIS; E=1e-28 COG: wcaF; COG0110 Acetyltransferases (the isoleucine patch superfamily); E=1e-29 slr1084; COG0110 Acetyltransferases (the isoleucine patch; E=2e-17 ylaD; COG0110 Acetyltransferases (the isoleucine patch superfamily); E=1e-08 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.049 putative colanic acid biosynthesis acetyltransferase	PUTATIVE COLANIC ACID BIOSYNTHESIS ACETYLTRANSFERASE WCAF	Putative transferase	Residues 1 to 182 of 182 are 100 pct identical to residues 1 to 182 of a 182 aa protein from Escherichia coli K12 ref: NP_416558.1 putative transferase	IPR001451: Bacterial transferase hexapeptide repeat putative acyltransferase in colanic acid biosynthesis	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative acyltransferase.	Putative acyltransferase	Code: R; COG: COG0110 putative transferase	COG0110 Acetyltransferase (isoleucine patch superfamily)	Code: R; COG: COG0110 putative transferase	transferase hexapeptide repeat	acetyltransferase probably involved in cell wall biosynthesis; COG0110	Acetyltransferase (isoleucine patch superfamily)-like	Acetyltransferase COG0110 [R] Acetyltransferase (isoleucine patch superfamily)	putative O-acetyl transferase putative acetyltransferase similarity:fasta; with=UniProt:Q7WYR6 (EMBL:RLE571701); Rhizobium leguminosarum bv. viciae 3841.; Putative acetyltransferase.; length=197; id 99.492; 197 aa overlap; query 1-197; subject 1-197 similarity:fasta; with=UniProt:Q8KNM6 (EMBL:AF148126); Aeromonas hydrophila.; O-acetyl transferase.; length=199; id 35.526; 152 aa overlap; query 40-184; subject 40-184	Putative colanic acid biosynthesis acetyltransferase WcaF	transferase hexapeptide repeat	Putative colanic acid biosynthesis acetyltransferase wcaF	hypothetical protein COG0110 acetyltransferase (isoleucine patch superfamily)	maltose transacetylase identified by match to protein family HMM PF00132	
ECOLI01993	Putative colanic acid biosynthesis glycosyl transferase wcaE	Putative colanic acid biosynthesis glycosyltransferase	Putative glycosyltransferase	Putative glycosyltransferase	Putative colanic acid biosynthesis glycosyl transferase wcaE	Putative colanic acid biosynthesis glycosyl transferase	Probable glycosyltransferase	IPR001173: Glycosyl transferase, family 2 putative transferase in colanic acid biosynthesis	similar to Salmonella typhi CT18 putative glycosyltransferase putative glycosyltransferase	Probable glycosyltransferase	Similar to Methanosarcina mazei glycosyltransferase involved in cell wall biogenesis MM0653 SWALL:Q8PZ41 (EMBL:AE013290) (248 aa) fasta scores: E(): 1.6e-22, 32.52% id in 246 aa, and to Bacteroides thetaiotaomicron putative glycosyltransferase BT2947 SWALL:AAO78053 (EMBL:AE016938) (251 aa) fasta scores: E(): 8.1e-83, 81.14% id in 244 aa, and to Helicobacter pylori J99 putative jhp0094 SWALL:Q9ZMX1 (EMBL:AE001448) (260 aa) fasta scores: E(): 7.5e-22, 37.03% id in 216 aa. CDS overlapping 20 amino acids with the downstream CDS putative glycosyltransferase	Putative transferase	Code: M; COG: COG0463 putative colanic acid biosynthesis glycosyl transferase	Code: M; COG: COG0463 putative colanic acid biosynthesis glycosyl transferase	Putative colanic acid biosynthesis glycosyl transferase WcaE	Glycosyltransferase	HAD-superfamily hydrolase subfamily IA	Putative colanic acid biosynthesis glycosyl transferase	glycosyl transferase, group 2 family protein COG0463 Glycosyltransferases involved in cell wall biogenesis	glycosyl transferase, family 2 PFAM: glycosyl transferase, family 2 KEGG: hpj:jhp0094 hypothetical protein	Glycosyltransferase	putative colanic acid biosynthesis glycosyl transferase Code: M; COG: COG0463	Glycosyltransferase	Putative colanic acid biosynthesis glycosyl transferase	Putative glycosyltransferase	Glycosyl transferase, family 2	Putative uncharacterized protein	Colanic acid biosynthesis glycosyl transferase WcaE	Predicted glycosyl transferase	
ECOLI01994	Putative colanic acid polymerase	Putative colanic acid polymerase	similar to Escherichia coli K12 putative colanic acid polymerase  ref: NP_416560.1 (405 aa). BLAST with identity of 96% in 324 aa. This CDS has been truncated.  The sequence has been checked and is believed to be correct. pseudo	putative colanic acid polymerase	similar to Salmonella typhimurium putative colanic acid polymerase putative colanic acid polymerase	Putative colanic acid polymerase	putative colanic acid polymerase	putative colanic acid polymerase	Putative colanic acid polymerase	Putative colanic acid polymerase	putative colanic acid polymerase	putative colanic acid polymerase	Wzy1 protein	Putative colanic acid polymerase	Putative uncharacterized protein	Colanic acid polymerase WcaD	Predicted colanic acid polymerase	Putative colanic acid polymerase	Colanic acid polymerase WcaD	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Colanic acid polymerase WcaD	Putative colanic acid polymerase	Putative colanic acid polymerase	Putative colanic acid polymerase	Putative colanic acid polymerase	Colanic acid polymerase	Putative colanic acid polymerase	
ECOLI01995	Putative colanic acid biosynthesis glycosyl transferase wcaC	Putative glycosyl transferase	Putative colanic acid biosynthesis glycosyl transferase wcaC	Glycosyl transferase, group 1 family protein	Glycosyl transferase, group 1 family protein	probable glucosyltransferase	Putative glycosyl transferase	Residues 1 to 405 of 405 are 99 pct identical to residues 1 to 405 of a 405 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288563.1 putative glycosyl transferase	putative glycosyl transferase in colanic acid biosynthesis	similar to Salmonella typhi CT18 putative glycosyltransferase putative glycosyltransferase	Similar to previously sequenced Bacteroides fragilis putative glycosyl transferase WcfI SWALL:Q9XDJ4 (EMBL:AF048749) (407 aa) fasta scores: E(): 3.2e-164, 99.5% id in 407 aa, and to Vibrio cholerae O37 glysosyl-transferase SWALL:Q8L354 (EMBL:AF390573) (409 aa) fasta scores: E(): 4.7e-22, 27.07% id in 325 aa, and to Rickettsia prowazekii hypothetical protein Rp336 rp336 SWALL:Q9ZDJ2 (EMBL:AJ235271) (407 aa) fasta scores: E(): 7.6e-20, 27.81% id in 338 aa putative glycosyltransferase	Putative glycosyl transferase	Code: M; COG: COG0438 putative glycosyl transferase	Code: M; COG: COG0438 putative glycosyl transferase	Glycosyl transferase, group 1	probable glucosyltransferase	Putative colanic acid biosynthesis glycosyl transferase WcaC	Glycosyl transferase, group 1	Putative glycosyltransferase	glycosyl transferase, group 1 family protein	Glycosyl transferase, group 1 precursor	putative glycosyl transferase Code: M; COG: COG0438	putative glycosyltransferase	Glycosyltransferase family 4	Putative glycosyltransferase	Glycosyl transferase	Glycosyl transferase group 1	Glycosyl transferase, group 1	Putative uncharacterized protein	
ECOLI01996	Putative colanic acid biosynthesis acetyltransferase wcaB	Putative acetyltransferase	Serine acetyltransferase	Putative colanic acid biosynthesis acetyltransferase	CysE protein	Putative colanic acid biosynthesis acetyltransferase wcaB	Putative capsular polysacharide biosynthesis transferase	probable serine acetyltransferase	Serine acetyltransferase	Putative colanic acid biosynthesis acetyltransferase wcaB	Serine O-acetyltransferase	Residues 1 to 146 of 146 are 100 pct identical to residues 17 to 162 of a 162 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288564.1 putative transferase	IPR001451: Bacterial transferase hexapeptide repeat putative acyl transferase in colanic acid biosynthesis	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	Putative serine acetyltransferase CysE	Serine O-acetyltransferase, putative	exopolysaccharide biosynthesis protein	Putative acyl transferase	Code: E; COG: COG1045 putative transferase	Code: E; COG: COG1045 putative transferase	transferase, hexapeptide repeat	Serine O-acetyltransferase KEGG: syf:Synpcc7942_2420 serine O-acetyltransferase, ev=7e-29, 45% identity	serine O-acetyltransferase identified by match to protein family HMM PF00132	Putative colanic acid biosynthesis acetyltransferase WcaB	serine O-acetyltransferase identified by similarity to SP:Q06750; match to protein family HMM PF00132; match to protein family HMM TIGR01172	serine O-acetyltransferase identified by similarity to SP:Q06750; match to protein family HMM PF00132; match to protein family HMM TIGR01172	Putative transferase	serine O-acetyltransferase KEGG: pen:PSEEN2446 serine O-acetyltransferase	serine acetyltransferase identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172	
ECOLI01997	Putative colanic acid biosynthesis glycosyl transferase wcaA	Glycosyl transferase, group 2 family protein	Uncharacterized glycosyltransferase HI1696	Putative glycosyltransferase	Glycosyl transferase	Glycosyltransferases involved in cell wall biogenesis	Putative colanic acid biosynthesis glycosyl transferase wcaA	Glycosyl transferase	Putative regulator	SCAC2.02c, probable glycosyl transferase, len: 257 aa; similar to TR:BAB07380 (EMBL:AP001519) Bacillus halodurans teichuronic acid biosynthesis TuaG, 257 aa; fasta scores: opt: 624 z-score: 745.5 E(): 0; 41.3% identity in 252 aa overlap. Contains Pfam match to entry PF00535 Glycos_transf_2, Glycosyl transferases putative glycosyl transferase	similar to Escherichia coli K12 putative regulator gi: 1788372 (280 aa). BLAST with identity of 96% in 279 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Cell wall biogenesis glycosyltransferase	IPR001173: Glycosyl transferase, family 2 putative glycosyl transferase in colanic acid biosynthesis	similar to Salmonella typhi Ty2 hypothetical protein hypothetical protein	Similar to: HI1696, YG96_HAEIN putative UDP-galactose--lipooligosaccharide galactosyltransferase	Similar to Shigella dysenteriae O-antigen related RfpA SWALL:Q53451 (EMBL:S73325) (269 aa) fasta scores: E(): 2e-19, 35.29% id in 255 aa, and to Corynebacterium efficiens conserved hypothetical protein ce0379 SWALL:Q8FSL1 (EMBL:AP005215) (336 aa) fasta scores: E(): 1.1e-24, 41.37% id in 232 aa, and to Escherichia coli putative glycosyltransferase WbgP SWALL:Q8VQ42 (EMBL:AF461121) (251 aa) fasta scores: E(): 1.2e-20, 33.75% id in 237 aa putative glycosyltransferase O-antigen related protein	Glycosyltransferases involved in cell wall biogenesis WcaA protein	Glycosyltransferase	Putative glycosyl transferase	Code: M; COG: COG0463 putative regulator	Code: M; COG: COG0463 putative regulator	Glycosyltransferase involved in cell wall biogenesis COG0463	Putative colanic acid biosynthesis glycosyl transferase WcaA	Glycosyltransferase	Putative colanic acid biosynthesis glycosyltransferase wcaA	Glycosyltransferase cytoplasmic protein	Glycosyltransferase cytoplasmic protein	Glycosyl transferase, family 2	glycosyl transferase, family 2 PFAM: glycosyl transferase, family 2 KEGG: ana:alr3073 probable glycosyl transferase	
ECOLI01998	Tyrosine-protein kinase wzc	Tyrosine-protein kinase wzc	Tyrosine-protein kinase	Tyrosine-protein kinase wzc	Tyrosine-protein kinase	Capsular polysaccharide transport protein, putative	Tyrosine-protein kinase wzc	hypothetical protein	Residues 1 to 732 of 732 are 98 pct identical to residues 1 to 732 of a 732 aa protein from Escherichia coli K12 ref: NP_416564.1 orf, conserved hypothetical protein	putative tyrosine-protein kinase in colanic acid export	similar to Salmonella typhi CT18 putative tyrosine-protein kinase putative tyrosine-protein kinase	Similar to Porphyromonas gingivalis W83 capsular polysaccharide transport protein, putative PG0436 SWALL:AAQ65636 (EMBL:AE017173) (822 aa) fasta scores: E(): 1.8e-72, 32.6% id in 773 aa, and to Acinetobacter johnsonii tyrosine-protein kinase Ptk SWALL:PTK_ACIJO (SWALL:O52788) (733 aa) fasta scores: E(): 9.1e-24, 22.7% id in 806 aa putative EPS related membrane protein	Tyrosine-protein kinase wzc	Code: M; COG: COG3206 conserved hypothetical protein	putative tyrosine-protein kinase	protein-tyrosine kinase	putative transmembrane polysaccaride biosynthesis protein similarity:fasta; SWALL:EXOP_RHIME (SWALL:P33698); Rhizobium meliloti; succinoglycan biosynthesis transport protein exop; exop or rb1086 or smb20961; length 786 aa; 790 aa overlap; query 10-732 aa; subject 10-775 aa similarity:fasta; SWALL:Q8RR84 (EMBL:AB059427); Acetobacter xylinus; putative ATP-binding protein; aceD; length 736 aa; 714 aa overlap; query 40-719 aa; subject 31-721 aa	Tyrosine-protein kinase wzc	Lipopolysaccharide biosynthesis	Chain length determinant family protein	Probable ATPase	conserved hypothetical protein Code: M; COG: COG3206	protein-tyrosine kinase	Capsular polysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein	Non-specific protein-tyrosine kinase	Putative uncharacterized protein	Tyrosine-protein kinase wzc	Non-specific protein-tyrosine kinase	
ECOLI01999	Low molecular weight protein-tyrosine-phosphatase wzb	Low molecular weight protein-tyrosine-phosphatase wzb	Low molecular weight protein-tyrosine-phosphatase	Low molecular weight protein-tyrosine-phosphatase	Low molecular weight protein-tyrosine-phosphatase wzb	CDS_ID OB0873 protein-tyrosine-phosphatase	Lin2684 protein	Residues 1 to 147 of 147 are 97 pct identical to residues 1 to 147 of a 147 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288567.1 probable protein-tyrosine-phosphatase	IPR000106: Low molecular weight phosphotyrosine protein phosphatase putative protein-tyrosine-phosphatase in colanic acid export	similar to Salmonella typhi CT18 putative protein-tyrosine phosphatase putative protein-tyrosine phosphatase	identified by match to protein family HMM PF01451 low molecular weight phosphotyrosine protein phosphatase family protein	Low molecular weight protein-tyrosine-phosphatase wzb	Code: T; COG: COG0394 probable protein-tyrosine-phosphatase	Code: T; COG: COG0394 probable protein-tyrosine-phosphatase	putative tyrosine-phosphatase	Low molecular weight protein-tyrosine-phosphatase wzb	Tyrosine phosphatase	low molecular weight protein-tyrosine-phosphatase	Complete genome	probable protein-tyrosine-phosphatase Code: T; COG: COG0394	Protein-tyrosine phosphatase	tyrosine phosphatase	Protein tyrosine phosphatase precursor	Protein tyrosine phosphatase	phosphotyrosine protein phosphatase	Protein tyrosine phosphatase	Protein tyrosine phosphatase	Putative uncharacterized protein	Low molecular weight protein-tyrosine-phosphatase wzb	
ECOLI02000	Putative polysaccharide export protein wza	Putative polysaccharide export protein wza	Putative polysaccharide export protein	Putative polysaccharide export protein wza	Residues 1 to 379 of 379 are 99 pct identical to residues 1 to 379 of a 379 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288568.1 putative polysaccharide export protein	IPR003715: Polysaccharide export protein putative polysaccharide export protein, outer membrane	similar to Salmonella typhi CT18 putative polysaccharide export protein putative polysaccharide export protein	Putative capsular polysaccharide export protein	Putative polysaccharide export protein wza	Code: M; COG: COG1596 putative polysaccharide export protein	Code: M; COG: COG1596 putative polysaccharide export protein	amylovoran export outer membrane protein AmsH	Polysaccharide export protein	Polysaccharide export protein precursor	Putative polysaccharide export protein wza	Putative polysaccharide export protein	polysaccharide export protein PFAM: polysaccharide export protein KEGG: bur:Bcep18194_B2273 polysaccharide export protein	polysaccharide export protein PFAM: polysaccharide export protein KEGG: bcn:Bcen_4540 polysaccharide export protein	polysaccharide export protein PFAM: polysaccharide export protein KEGG: neu:NE2279 polysaccharide export protein	Capsular polysaccharide biosynthesis protein	putative polysaccharide export protein Code: M; COG: COG1596	putative polysaccharide export protein	Polysaccharide export protein precursor	Polysaccharide export protein precursor	Putative uncharacterized protein	Polysaccharide biosynthesis/export protein	Lipoprotein required for capsular polysaccharide translocation through the outer membrane	Polysaccharide export protein precursor	Polysaccharide biosynthesis/export protein	
ECOLI02001	UPF0053 protein yegH	Putative membrane protein	Hypothetical protein yegH	pseudo	Putative membrane protein	Putative membrane protein	Putative membrane protein	CBS domain protein	Putative membrane protein	Putative transport protein	Hemolysin containing CBS domains	Residues 1 to 510 of 510 are 99 pct identical to residues 18 to 527 of a 527 aa protein YEGH_ECOLI sp: P76389 orf, conserved hypothetical protein	Putative membrane protein	Similar to putative transport protein YegH Escherichia coli	Probable transport membrane protein	IPR000644: CBS domain putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Possible CorC/HlyC family of Mg+2/Co+2/heavy metal efflux pumps	Putative inner membrane protein	identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741 membrane protein, TerC family	CBS:Transporter-associated region:Integral membrane protein TerC	Code: R; COG: COG1253 putative transport protein	Code: R; COG: COG1253 putative transport protein	Code: R; COG: COG1253 putative transport protein	Putative membrane protein	Putative membrane protein	Putative transport protein	protein of unknown function DUF21 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region KEGG: aba:Acid345_3532 protein of unknown function DUF21	Membrane protein	
ECOLI02002	Protein asmA	Putative uncharacterized protein	Putative AsmA protein	Putative outer membrane assembly protein	Related to periplasmic protein	Hypothetical AsmA protein	Protein asmA	AsmA family protein	AsmA protein	AsmA protein	Putative outer membrane assembly protein	Product confidence : putative Gene name confidence : hypothetical putative protein, similar to protein involved in assembly of outer membrane proteins	Putative uncharacterized protein	AsmA protein	Suppressor of ompF assembly mutants	ASMA	Residues 1 to 617 of 617 are 99 pct identical to residues 1 to 617 of a 617 aa protein from Escherichia coli K12 ref: NP_416568.1 suppressor of ompF assembly mutants	Putative exported protein	Protein AsmA	identified by match to protein family HMM PF05170 AsmA family protein	suppressor of ompF assembly mutants	similar to Salmonella typhi CT18 putative outer membrane assembly protein putative outer membrane assembly protein	Putative exported protein	AsmA	Putative uncharacterized protein	Suppressor of ompF assembly mutants	identified by match to protein family HMM PF05170 AsmA family superfamily	identified by match to protein family HMM PF05170 AsmA family superfamily	AsmA	
ECOLI02003	Deoxycytidine triphosphate deaminase	Probable deoxycytidine triphosphate deaminase	Probable deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Probable deoxycytidine triphosphate deaminase	Probable deoxycytidine triphosphate deaminase	Probable deoxycytidine triphosphate deaminase	Probable deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	hypothetical protein	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	(DCTP deaminase), deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	similar to AL078610-8|CAB44381.1| percent identity: 68 in 190 aa putative dCTP deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	Deoxycytidine triphosphate deaminase	
ECOLI02004	Uridine kinase	Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; weak similarity with uridine kinases and with phosphoribokinases.  [Source:SGD;Acc:S000002427]	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	DEHA2D04070p;similar to uniprot|Q12084 Saccharomyces cerevisiae YDR020c;	Uridine kinase	Possible phosphoribulokinase/uridine kinase family protein	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Putative uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	Uridine kinase	identified by match to protein family HMM PF00485; match to protein family HMM TIGR00235 uridine kinase	Uridine kinase	Uridine kinase	
ECOLI02005	Uncharacterized protein yegE	Putative membrane protein	Hypothetical protein yegE	Sensory box protein	glimmer prediction; similar to HYPOTHETICAL 91.8 KD PROTEIN Y4LL [Rhizobium sp. NGR234] ACCESSION P55552, has putative PAC motif, PAS domain conserved hypothetical protein	Sensory box/GGDEF domain/EAL domain protein	Partial putative sensor kinase	Diguanylate cyclase/phosphodiesterase domain 2	Probable signal transduction eal-ggdef domains transmembrane protein	two-component response regulator	Putative uncharacterized protein	IPR000014: PAS domain; IPR000160: GGDEF; IPR000700: PAS-associated, C-terminal;IPR001610: PAC motif;IPR001633: EAL domain;IPR007895: MASE1 putative PAS/PAC domain; Diguanylate cyclase/phosphodiesterase domain 1, Diguanylate cyclase/phosphodiesterase domain 2,	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Sensory box protein	Putative PAS/PAC domain protein	PAS:GGDEF	PAS:GGDEF	PAS:GGDEF	Code: T; COG: COG2202 putative sensor-type protein	COG2200, Rtn, FOG: EAL domain [Signal transduction mechanisms]; pfam00563, EAL, EAL domain; COG2199, FOG:GGDEF domain; pfam00990, GGDEF, GGDEF domain; COG2202, AtoS, FOG: PAS/PAC domain PAS sensor diguanylatecyclase/phosphodiesterase	Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	putative GGDEF/EAL transmembrane sensory box protein similarity:fasta; with=UniProt:Q98JA6 (EMBL:BA000012); Rhizobium loti (Mesorhizobium loti).; Mlr2027 protein.; length=867; id 39.210; 1038 aa overlap; query 15-1046; subject 15-867	Hypothetical transmembrane protein YegE	diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) KEGG: syn:slr0359 hypothetical protein TIGRFAM: GGDEF domain PFAM: GGDEF EAL GAF PAS fold-3 PAS fold-4 PAS fold SMART: PAS PAC motif	GGDEF domain	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)	Conserved hypothetical signal transduction protein	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)	
ECOLI02006	DNA-3-methyladenine glycosylase 2	DNA-3-methyladenine glycosidase II	Putative DNA-3-methyladenine glycosylase II	DNA-3-methyladenine glycosylase II	DNA-3-methyladenine glycosylase	DNA-3-methyladenine glycosylase 1	DNA-3-methyladenine glycosidase II	DNA-3-methyladenine glycosylase II	3-methyl-adenine DNA glycosylase II, inducible	Residues 1 to 282 of 282 are 97 pct identical to residues 1 to 282 of a 282 aa protein from Escherichia coli K12 ref: NP_416572.1 3-methyl-adenine DNA glycosylase II, inducible	Putative glycosidase	Mb1350c, alkAb, len: 416 aa. Equivalent to the 3' end of Rv1317c, len: 496 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 416 aa overlap). Putative alkA (alternate gene name: ada), regulatory protein (EC 2.1.1.63), similar to 3MG2_ECOLI|P04395 dna-3-methyladenine glycosidase II from Escherichia coli (282 aa), FASTA scores, opt: 437, E(): 8.6e-22, (32.8% identity in 293 aa overlap), also similar to other ada proteins e.g. ADA_SALTY|P26189 Salmonella typhimurium (352 aa), FASTA scores: E(): 5.3e-08, (35.9% identity in 156 aa overlap). Contains PS00041 Bacterial regulatory proteins, araC family signature.  REMARK-M.bovis-M.tuberculosis: In Mycobacterium tuberculosis strain H37Rv, alkA exists as a single gene.  In Mycobacterium bovis, a single base transition (g-a) introduces a premature stop codon that splits alkA into 2 parts, alkAa and alkAb. PUTATIVE ADA REGULATORY PROTEIN ALKAb [SECOND PART] (Regulatory protein of adaptative response) : Methylated-DNA--protein-cysteine methyltransferase (O-6-methylguanine-DNA alkyltransferase)	IPR000035: Alkylbase DNA glycosidase 3-methyl-adenine DNA glycosylase II, inducible	similar to Salmonella typhi CT18 DNA-3-methyladenine glycosidase II DNA-3-methyladenine glycosidase II	Putative DNA-3-methyladenine glycosidase	3-methyl-adenine DNA glycosylase II	identified by similarity to SP:P04395; match to protein family HMM PF00730; match to protein family HMM PF06029 DNA-3-methyladenine glycosylase II	HhH-GPD	Code: L; COG: COG0122 3-methyl-adenine DNA glycosylase II, inducible	Code: L; COG: COG0122 3-methyl-adenine DNA glycosylase II, inducible	HhH-GPD	3-methyladenine DNA glycosylase/8-oxoguanineDNA glycosylase	Code: L; COG: COG0122 3-methyl-adenine DNA glycosylase II, inducible	DNA-3-methyladenine glycosylase II	DNA-3-methyladenine glycosylase II identified by match to protein family HMM PF00730; match to protein family HMM PF06029	DNA-3-methyladenine glycosylase II	Hypothetical protein	Putative glycosidase	DNA-3-methyladenine glycosylase II	
ECOLI02007	Uncharacterized chaperone protein yegD	Heat shock protein	Putative uncharacterized protein	Probable heat-shock protein	Molecular chaperone	Molecular chaperone, Hsp70 family	Putative uncharacterized protein STY2338	Putative chaperone protein	putative heat shock protein 70 family protein	Hypothetical chaperone protein yegD	similar to SP:P04475; identified by sequence similarity; putative heat shock protein, Hsp70 family	Heat shock protein 70 family protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE HEAT SHOCK PROTEIN	Heat shock protein YegD	Chaperone protein, putative	DNAK PROTEIN	Heat shock protein 70 family protein	Putative heat shock protein	dnaK-type molecular chaperone dnaK	Molecular chaperone	similar to Escherichia coli K12 putative heat shock protein gi: 1788384 (472 aa). BLAST with identity of 98% in 472 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Putative heat shock protein	Probable heat shock protein	identified by similarity to SP:P36928 heat shock protein, Hsp70 family	Probable heat-shock protein Hsp 70	Molecular chaperone heat shock protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark heat shock protein	
ECOLI02008	Uncharacterized protein yegI	Hypothetical protein yegI	Uncharacterized protein yegI	Residues 4 to 510 of 510 are 95 pct identical to residues 1 to 507 of a 646 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288578.1 putative chaperonin	Code: R; COG: COG4248 putative chaperonin	Code: R; COG: COG4248 putative chaperonin	Code: R; COG: COG4248 putative chaperonin	Putative uncharacterized protein	Putative uncharacterized protein yegI	putative chaperonin Code: R; COG: COG4248	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative chaperonin	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	DNA topoisomerase type IA zn finger domain protein	Putative chaperone	Putative uncharacterized protein	Putative uncharacterized protein yegI	Putative uncharacterized protein	Putative uncharacterized protein yegI	Putative uncharacterized protein yegI	Putative uncharacterized protein yegI	Putative uncharacterized protein yegI	
ECOLI02009	Uncharacterized protein yegJ	hypothetical conserved protein similar to mlr2620 [Mesorhizobium loti] Similar to swissprot:Q98I10 Putative location:bacterial cytoplasm Psort-Score: 0.1669	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical conserved protein	Putative uncharacterized protein	Putative uncharacterized protein yegJ	Putative uncharacterized protein	Putative uncharacterized protein yegJ	Putative uncharacterized protein	Predicted protein	
ECOLI02010	Uncharacterized protein yegK	Hypothetical protein yegK	Putative uncharacterized protein	Residues 1 to 253 of 253 are 96 pct identical to residues 1 to 253 of a 253 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288579.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein yegK	conserved hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Serine/threonine phosphoprotein phosphatase	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yegK	
ECOLI02011	Uncharacterized protein yegL	Hypothetical protein yegL	von Willebrand factor type A domain protein	Putative uncharacterized protein	Residues 1 to 188 of 188 are 97 pct identical to residues 32 to 219 of a 219 aa protein from Escherichia coli K12 ref: NP_416577.1 orf, conserved hypothetical protein	Code: R; COG: COG4245 conserved hypothetical protein	COG4245, TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain. conserved hypothetical protein containing Von Willebrand factor, type A domain	Code: R; COG: COG4245 conserved hypothetical protein	von Willebrand factor, type A	uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain COG4245	Code: R; COG: COG4245; orf conserved hypothetical protein	Putative uncharacterized protein	von Willebrand factor, type A	Putative uncharacterized protein yegL	Von Willebrand factor, type A	von Willebrand factor, type A PFAM: von Willebrand factor, type A KEGG: tel:tlr0974 hypothetical protein	von Willebrand factor, type A PFAM: von Willebrand factor, type A KEGG: sfx:S2262 hypothetical protein	conserved hypothetical protein Code: R; COG: COG4245	Von Willebrand factor, type A	conserved hypothetical protein	von Willebrand factor type A domain protein	Putative uncharacterized protein	von Willebrand factor, type A	Putative uncharacterized protein	Conserved protein	von Willebrand factor type A domain protein	von Willebrand factor type A	von Willebrand factor type A domain protein	Putative uncharacterized protein	
ECOLI02012	Multidrug resistance protein mdtA	Multidrug resistance protein mdtA	Putative transport system, membrane protein	Multidrug resistance protein mdtA precursor	HlyD family secretion protein	HlyD family secretion protein	Multidrug resistance protein mdtA	HlyD family secretion protein	HlyD family secretion protein	Multidrug resistance protein mdtA	Possible membrane protein, permease	Residues 9 to 350 of 350 are 99 pct identical to residues 74 to 415 of a 415 aa protein YEGM_ECOLI sp: P76397 orf, conserved hypothetical protein	Multidrug resistance protein mdtA	Putative membrane fusion protein	Multidrug resistance protein mdtA	Secretion protein HlyD	putative HlyD family secretion protein	Multidrug resistance protein mdtA	RND transporter, membrane fusion protein	Multidrug resistance protein mdtA	identified by similarity to GB:BAC06607.1; match to protein family HMM PF00529; match to protein family HMM TIGR01730 multidrug RND efflux transporter, membrane fusion protein MdtA	identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 RND efflux transporter, multidrug transport membrane fusion protein MdtA	Secretion protein HlyD	Secretion protein HlyD	Code: M; COG: COG0845 putative membrane protein	Code: M; COG: COG0845 putative membrane protein	secretion protein HlyD	secretion protein HlyD	Secretion protein HlyD	
ECOLI02013	Multidrug resistance protein mdtB	Multidrug resistance protein mdtB	Putative transport system, membrane protein	Multidrug resistance protein mdtB	AcrB/AcrD/AcrF family protein	AcrB/AcrD/AcrF family protein	Multidrug resistance protein mdtB	AcrB/AcrD/AcrF family protein	Multidrug resistance protein mdtB	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1788390 (1041 aa). BLAST with identity of 98% in 1041 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Multidrug resistance protein mdtB	Probable drug efflux pump transmembrane protein	Multidrug resistance protein mdtB	Probable drug efflux pump transmembrane protein	IPR001036: Acriflavin resistance protein paral putative outer membrane receptor	similar to Salmonella typhi CT18 putative RND-family transporter protein putative RND-family transporter protein	Multidrug resistance protein mdtB	Evidence 2b : Function of strongly homologous gene; Product type t : transporter multidrug transport protein (RND family)	COG0841 cation/multidrug efflux pump	Multidrug resistance protein mdtB	Acriflavin resistance protein D	identified by similarity to GB:BAC06608.1; match to protein family HMM PF00873 multidrug RND efflux transporter, permease protein MdtB	identified by similarity to GB:BAC06608.1; match to protein family HMM PF00873 multidrug RND efflux transporter, permease protein MdtB	Acriflavin resistance protein	Acriflavin resistance protein	Code: V; COG: COG0841 conserved hypothetical protein	Code: V; COG: COG0841 conserved hypothetical protein	multidrug efflux system transmembrane protein start codon not provided	acriflavin resistance protein	
ECOLI02014	Multidrug resistance protein mdtC	Multidrug resistance protein mdtC	Putative transport system, membrane protein	Multidrug resistance protein mdtC	AcrB/AcrD/AcrF family protein	AcrB/AcrD/AcrF family protein	Multidrug resistance protein mdtC	AcrB/AcrD/AcrF family protein	AcrB/AcrD/AcrF family protein	Multidrug resistance protein mdtC	Residues 1 to 1021 of 1021 are 98 pct identical to residues 1 to 1025 of a 1025 aa protein from Escherichia coli K12 ref: NP_416580.1 orf, conserved hypothetical protein	Multidrug resistance protein mdtC	Probable drug efflux transmembrane protein	Multidrug resistance protein mdtC	Probable drug efflux pump transmembrane protein	IPR001036: Acriflavin resistance protein putative resistance protein (efflux transporter), outer membrane	similar to Salmonella typhi CT18 putative RND-family transporter protein putative RND-family transporter protein	Multidrug resistance protein mdtC	Evidence 2b : Function of strongly homologous gene; Product type t : transporter multidrug transport protein, outer membrane (RND family)	COG0841 cation/multidrug efflux pump	RND efflux transporter, permease protein	Multidrug resistance protein mdtC	Acriflavin resistance protein	Acriflavin resistance protein	Code: V; COG: COG0841 conserved hypothetical protein	Code: V; COG: COG0841 conserved hypothetical protein	multidrug efflux system transmembrane protein	acriflavin resistance protein	Acriflavin resistance protein	
ECOLI02015	Putative multidrug resistance protein mdtD	Putative multidrug resistance protein mdtD	Putative multidrug resistance protein mdtD	Putative multidrug resistance protein mdtD	Putative multidrug resistance protein mdtD	Residues 1 to 471 of 471 are 99 pct identical to residues 1 to 471 of a 471 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288585.1 putative transport protein	Putative multidrug resistance protein mdtD	similar to Salmonella typhi CT18 putative transporter protein putative transporter protein	Putative multidrug resistance protein mdtD	Putative multidrug resistance protein mdtD	Putative uncharacterized protein	Drug resistance transporter EmrB/QacA subfamily	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Putative multidrug resistance protein mdtD	Putative membrane protein	Putative multidrug resistance protein mdtD	Membrane protein	Putative membrane protein	putative transport protein Code: GEPR; COG: COG0477	Membrane protein	putative transport protein	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: rso:RS05323 probable transporter transmembrane protein	hypothetical protein	Major facilitator superfamily MFS_1	Putative multidrug resistance protein mdtD	Multidrug transport protein	Putative multidrug resistance protein mdtD	Major facilitator superfamily MFS_1	
ECOLI02016	Signal transduction histidine-protein kinase baeS	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein baeS	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor histidine kinase	Sensor protein	Sensor protein	two-component sensor histidine kinase	two-component sensor histidine kinase	Sensor protein	Sensor protein	similar to AP003597-134|BAB76425.1| percent identity: 31 in 359 aa putative sensor kinase	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Residues 1 to 467 of 467 are 100 pct identical to residues 1 to 467 of a 467 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288586.1 sensor protein (for BaeR)	pseudo	Sensor protein	Sensor protein	Sensor protein	two-component sensor histidine kinase	
ECOLI02017	Transcriptional regulatory protein baeR	Putative two-component system response regulator	Transcriptional regulatory protein baeR	Two-component system response regulator	Transcriptional response regulatory protein	Residues 1 to 240 of 240 are 99 pct identical to residues 1 to 240 of a 240 aa protein from Escherichia coli O157:H7 ref: NP_310914.1 transcriptional response regulatory protein	Two-component system response regulator	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response regulator in two-component regulatory system with BaeS (OmpR family)	similar to Salmonella typhi CT18 putative two-component system response regulator putative two-component system response regulator	Two-component system response regulator	Response regulator in two-component regulatory system with BaeS	identified by similarity to SP:P30846; match to protein family HMM PF00072; match to protein family HMM PF00486 DNA-binding response regulator BaeS	Response regulator receiver:Transcriptional regulatory protein, C-terminal	sensor BaeS; Code: TK; COG: COG0745 transcriptional response regulatory protein	Two component signal transduction response regulator	sensor BaeS; Code: TK; COG: COG0745 transcriptional response regulatory protein	sensor BaeS; Code: TK; COG: COG0745 transcriptional response regulatory protein	Transcriptional regulatory protein BaeR	Two-component system response regulator	response regulator receiver domain protein (CheY-like)	two component transcriptional regulator, winged helix family	response regulator receiver domain protein (CheY-like)	Two component transcriptional regulator, winged helix family	Transcriptional response regulatory protein BaeR	two component transcriptional regulator, winged helix family PFAM: response regulator receiver; transcriptional regulator domain protein KEGG: sfv:SFV_2140 transcriptional response regulatory protein	putative response regulator	Two-component system response regulator	Two-component system response regulator	transcriptional response regulatory protein Code: TK; COG: COG0745	
ECOLI02017	Transcriptional regulatory protein baeR	Putative two-component system response regulator	Transcriptional regulatory protein baeR	Two-component system response regulator	Transcriptional response regulatory protein	Residues 1 to 240 of 240 are 99 pct identical to residues 1 to 240 of a 240 aa protein from Escherichia coli O157:H7 ref: NP_310914.1 transcriptional response regulatory protein	Two-component system response regulator	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response regulator in two-component regulatory system with BaeS (OmpR family)	similar to Salmonella typhi CT18 putative two-component system response regulator putative two-component system response regulator	Two-component system response regulator	Response regulator in two-component regulatory system with BaeS	identified by similarity to SP:P30846; match to protein family HMM PF00072; match to protein family HMM PF00486 DNA-binding response regulator BaeS	Response regulator receiver:Transcriptional regulatory protein, C-terminal	sensor BaeS; Code: TK; COG: COG0745 transcriptional response regulatory protein	Two component signal transduction response regulator	sensor BaeS; Code: TK; COG: COG0745 transcriptional response regulatory protein	sensor BaeS; Code: TK; COG: COG0745 transcriptional response regulatory protein	Transcriptional regulatory protein BaeR	Two-component system response regulator	response regulator receiver domain protein (CheY-like)	two component transcriptional regulator, winged helix family	response regulator receiver domain protein (CheY-like)	Two component transcriptional regulator, winged helix family	Transcriptional response regulatory protein BaeR	two component transcriptional regulator, winged helix family PFAM: response regulator receiver; transcriptional regulator domain protein KEGG: sfv:SFV_2140 transcriptional response regulatory protein	putative response regulator	Two-component system response regulator	Two-component system response regulator	transcriptional response regulatory protein Code: TK; COG: COG0745	
ECOLI02018	UPF0339 protein yegP	UPF0339 protein PA0329	UPF0339 protein yegP	UPF0339 protein BP0521	UPF0339 protein BB0445	UPF0339 protein SO_3888	UPF0339 protein BPP0444	UPF0339 protein yegP	Residues 1 to 123 of 123 are 98 pct identical to residues 1 to 123 of a 123 aa protein from Escherichia coli K12 ref: NP_416584.1 orf, conserved hypothetical protein	UPF0339 protein yegP	UPF0339 protein plu2779	Putative uncharacterized protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	identified by match to protein family HMM PF07411 conserved hypothetical protein	Code: S; COG: COG3422 conserved hypothetical protein	Code: S; COG: COG3422 conserved hypothetical protein	Protein of unknown function DUF1508	Protein of unknown function DUF1508	Putative uncharacterized protein	protein of unknown function DUF1508 PFAM: protein of unknown function DUF1508: (4.9e-23) KEGG: nmu:Nmul_A2168 protein of unknown function DUF1508, ev=1e-36, 67% identity	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yegP	protein of unknown function DUF1508	protein of unknown function DUF1508 PFAM: protein of unknown function DUF1508 KEGG: nmu:Nmul_A2168 protein of unknown function DUF1508	conserved hypothetical protein	protein of unknown function DUF1508	protein of unknown function DUF1508 PFAM: protein of unknown function DUF1508 KEGG: pfl:PFL_1392 hypothetical protein	
ECOLI02019	Uncharacterized protease yegQ	Uncharacterized protease MJ0090	Putative uncharacterized protein	Peptidase, U32 family	Uncharacterized protease HI0419	Collagenase	Collagenase	Peptidase U32	Probable protease	Peptidase, U32 family	Putative protease	Putative uncharacterized protein	Probable peptidase	Putative protease	Collagenase	Putative protease	Lmo0961 protein	putative protease	Protease	Putative protease yegQ	Peptidase, U32 family	Protease, putative	Peptidase, U32 family	Putative protease	Protease	PUTATIVE PROTEASE	Uncharacterized protease HP_0169	protease	Putative protease	
ECOLI02020	Prophage P2 OGR protein	Phage regulatory protein	Putative regulatory protein	similar to Salmonella typhi CT18 putative positive regulator of late gene transcription putative positive regulator of late gene transcription	putative phage late gene regulator	Ogr Phage transcriptional activator	Phage transcriptional activator, Ogr/delta	Phage transcriptional activator, Ogr/Delta	Transcriptional activator Ogr/delta	DNA-binding transcriptional regulator, prophage P2 remnant	Phage transcriptional activator, Ogr/Delta	Phage transcriptional activator, Ogr/Delta	Putative uncharacterized protein	Transcriptional activator Ogr/delta	Putative transcriptional regulator	Putative positive regulator of late gene transcription	Putative positive regulator of phage late gene transcription	Phage transcriptional activator, Ogr/Delta	Putative phage zinc-binding transcriptional activator	DNA-binding transcriptional regulator; prophage P2 remnant	DNA-binding transcriptional regulator; prophage P2 remnant	Predicted DNA-binding transcriptional regulator	Transcriptional activator Ogr/delta	Putative uncharacterized protein	Transcriptional activator Ogr/delta	Transcriptional activator Ogr/delta	DNA-binding transcriptional regulator prophage P2 remnant	Transcriptional activator Ogr/delta	
ECOLI02022	Uncharacterized protein yegR	Putative uncharacterized protein	Residues 1 to 125 of 125 are 98 pct identical to residues 1 to 125 of a 125 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288590.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative lipoprotein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yegR	Putative uncharacterized protein yegR	Putative uncharacterized protein yegR	Putative uncharacterized protein yegR	Putative uncharacterized protein yegR	Predicted protein	Putative uncharacterized protein yegR	YegR protein	Predicted protein	Predicted protein	conserved predicted protein	
ECOLI02023	Lipid kinase yegS	Diacylglycerol kinase-like, catalytic region	Putative uncharacterized protein CPE1328	Probable lipid kinase yegS-like	pseudo	All1876 protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein yegS	unknown	identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147 conserved hypothetical protein TIGR00147	Probable lipid kinase yegS-like	best DB hits: BLAST: pir:D83268; conserved hypothetical protein PA3023 [imported] -; E=6e-20 swissprot:P76407; YEGS_ECOLI HYPOTHETICAL 32.0 KDA PROTEIN IN; E=9e-14 gb:AAG57146.1; AE005435_4 (AE005435) orf, hypothetical protein; E=3e-13 COG: PA3023; COG1597 Uncharacterized ACR; E=6e-21 PFAM: PF00781; Diacylglycerol kinase catalyti; E=0.0004 conserved hypothetical protein	BmrU protein	Probable lipid kinase yegS-like	Putative uncharacterized protein	hypothetical protein	hypothetical conserved protein	Putative uncharacterized protein	Probable lipid kinase yegS-like	Probable lipid kinase yegS	CDS_ID OB0767 hypothetical protein	Diacylglycerol kinase related protein	Unsharacterized protein, BmrU family	Putative uncharacterized protein BmrU	Residues 1 to 299 of 299 are 99 pct identical to residues 1 to 299 of a 299 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288591.1 orf, conserved hypothetical protein	Probable lipid kinase yegS-like	


ECOLI00287	Putative HTH-type transcriptional regulator ykgA	Hypothetical transcriptional regulator ykgA	Putative AraC-like transcriptional regulator	IPR000005: Helix-turn-helix, AraC type putative bacterial regulatory helix-turn-helix proteins, araC family	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Putative bacterial regulatory helix-turn-helix protein, araC family	Putative bacterial regulatory helix-turn-helix proteins, AraC family	Hypothetical transcriptional regulator YkgA	putative transcriptional regulator	Transcriptional regulator, AraC family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Putative uncharacterized protein	Putative HTH-type transcriptional regulator YkgA	Putative transcriptional regulator	Putative regulatory protein	Putative regulatory protein	Putative transcriptional regulator	Putative regulatory protein	Transcriptional regulator, AraC family	Putative regulatory protein	Putative transcriptional regulator	Putative transcription regulator	Putatve transcriptional regulator ykgA	Putatve transcriptional regulator ykgA	Putatve transcriptional regulator ykgA	Putatve transcriptional regulator ykgA	

ECOLI02024	Galactitol-1-phosphate 5-dehydrogenase	Lmo2664 protein	Galactitol-1-phosphate 5-dehydrogenase	Product confidence : putative Gene name confidence : hypothetical putative sugar-alcohol dehydrogenase, probably galactitol-1-phosphate 5-dehydrogenase protein	Galactitol-1-phosphate 5-dehydrogenase	Lin2813 protein	Residues 1 to 346 of 346 are 99 pct identical to residues 1 to 346 of a 346 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288593.1 galactitol-1-phosphate dehydrogenase	Putative uncharacterized protein	IPR000205: NAD-binding site; IPR002085: Zinc-containing alcohol dehydrogenase superfamily; IPR002328: Zinc-containing alcohol dehydrogenase galactitol-1-phosphate dehydrogenase	similar to Salmonella typhi CT18 galactitol-1-phosphate dehydrogenase galactitol-1-phosphate dehydrogenase	identified by match to protein family HMM PF00107 alcohol dehydrogenase, zinc-dependent	Galactitol-1-phosphate dehydrogenase	Code: ER; COG: COG1063 galactitol-1-phosphate dehydrogenase	Code: ER; COG: COG1063 galactitol-1-phosphate dehydrogenase	Code: ER; COG: COG1063 galactitol-1-phosphate dehydrogenase	Galactitol-1-phosphate 5-dehydrogenase	Galactitol-1-phosphate dehydrogenase	Galactitol-1-phosphate dehydrogenase	Alcohol dehydrogenase GroES domain protein	Complete genome	Zinc-binding dehydrogenase	Oxidoreductase, zinc-binding dehydrogenase family protein	galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding	transcript_id=ENSOPRT00000008176	Galactitol-1-phosphate dehydrogenase	Galactitol-1-phosphate 5-dehydrogenase	Alcohol dehydrogenase, zinc-binding domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: mav:MAV_4173 oxidoreductase, zinc-binding dehydrogenase family protein	Galactitol-1-phosphate dehydrogenase, Zn- dependent and NAD(P)-binding	Galactitol-1-phosphate 5-dehydrogenase	
ECOLI02025	Galactitol permease IIC component	PTS system, galactitol-specific IIC component	Galactitol permease IIC component	Residues 1 to 451 of 451 are 98 pct identical to residues 1 to 451 of a 451 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288594.1 PTS system galactitol-specific enzyme IIC	PTS system, galactitol-specific enzyme II, C component	IPR001865: Ribosomal protein S2; IPR004703: PTS system Galactitol-specific IIC component PTS family galactitol-specific enzyme IIC	similar to Salmonella typhi CT18 PTS system, galactitol-specific IIC component PTS system, galactitol-specific IIC component	PTS family galactitol-specific enzyme IIC	Code: G; COG: COG3775 PTS system galactitol-specific enzyme IIC	Code: G; COG: COG3775 PTS system galactitol-specific enzyme IIC	PTS system, galactitol-specific IIC component	PTS system, galactitol-specific IIC component	PTS system, galactitol-specific IIC component	galacitol PTS, EIIC	PTS system galactitol-specific enzyme IIC Code: G; COG: COG3775	galactitol-specific enzyme IIC component of PTS	PTS family enzyme IIC, galactitol-specific	PTS system, galactitol-specific IIC component	Galactitol-specific enzyme IIC component of PTS	PTS system, galactitol-specific IIC component	PTS system, galactitol-specific IIC subunit	PTS system, galactitol-specific IIC component	PTS system, galactitol-specific IIC subunit	Putative uncharacterized protein	PTS system Galactitol-specific IIC component	PTS system, galactitol-specific IIC component	PTS system, galactitol-specific IIC component	PTS family galactitol-specific enzyme IIC	PTS family galactitol-specific enzyme IIC	
ECOLI02026	Galactitol-specific phosphotransferase enzyme IIB component	Galactitol-specific phosphotransferase enzyme IIB component	PTS system, galactitol-specific IIB component	Galactitol-specific phosphotransferase enzyme IIB component	Residues 1 to 94 of 94 are 100 pct identical to residues 1 to 94 of a 94 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288595.1 galactitol-specific enzyme IIB of phosphotransferase system	Galactitol PTS, EIIB	PTS system, galactitol-specific enzyme II, B component	IPR003501: Phosphotransferase system, lactose/cellobiose-specific IIB subunit PTS family galactitol-specific enzyme IIB	similar to Salmonella typhi CT18 PTS system, galactitol-specific IIB component PTS system, galactitol-specific IIB component	PTS family galactitol-specific enzyme IIB	Code: G; COG: COG3414 galactitol-specific enzyme IIB of phosphotransferase system	Code: G; COG: COG3414 galactitol-specific enzyme IIB of phosphotransferase system	Code: G; COG: COG3414 galactitol-specific enzyme IIB of phosphotransferase system	PTS system, galactitol-specific IIB component	Galactitol-specific enzyme IIB of phosphotransferase system	PTS system, galactitol-specific IIB component	galactitol-specific enzyme IIB of phosphotransferase system Code: G; COG: COG3414	galactitol-specific enzyme IIB component of PTS	PTS family enzyme IIB, galactitol-specific	PTS system, galactitol-specific IIB component	Galactitol-specific enzyme IIB component of PTS	PTS system, galactitol-specific IIB component	Phosphotransferase system lactose/cellobiose- specific IIB subunit precursor	PTS system, galactitol-specific IIB component	Phosphotransferase system lactose/cellobiose- specific IIB subunit precursor	Putative uncharacterized protein	PTS system, galactitol-specific IIB component	PTS system, galactitol-specific IIB component	Galactitol-specific phosphotransferase enzyme iib component	
ECOLI02027	Galactitol-specific phosphotransferase enzyme IIA component	Galactitol-specific phosphotransferase enzyme IIA component	Putative PTS system	Galactitol-specific phosphotransferase enzyme IIA component	Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable galactitol specific	PTS system, galactitol-specific enzyme II, A component	Phosphotransferase system mannitol/fructose- specific IIA domain	Residues 1 to 150 of 150 are 99 pct identical to residues 1 to 150 of a 150 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288596.1 galactitol-specific enzyme IIA of phosphotransferase system	PTS system, galactitol-specific enzyme II, A component	IPR002178: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Sugar specific-family of transport protein, galactitol-specific enzyme IIA of phosphotransferase system	similar to Salmonella typhi CT18 PTS system, galactitol-specific IIA component PTS system, galactitol-specific IIA component	Galactitol-specific enzyme IIA of phosphotransferase system	Code: GT; COG: COG1762 galactitol-specific enzyme IIA of phosphotransferase system	putative PTS system galactitol-specific IIA component	PTS system, galactitol-specific IIA component	Galactitol-specific enzyme IIA of phosphotransferase system	PTS system, galactitol-specific IIA component	Phosphotransferase system galacitol-specific IIA domain (Ntr-type)	galactitol-specific enzyme IIA of phosphotransferase system	PTS family enzyme IIA, galactitol-specific	PTS system, galactitol-specific IIB component	Galactitol-specific enzyme IIA component of PTS	PTS system, galactitol-specific IIB component	Putative PTS IIA-like nitrogen-regulatory protein PtsN	PTS system, galactitol-specific IIB component	Putative PTS IIA-like nitrogen-regulatory protein PtsN	Putative uncharacterized protein	Putative PTS IIA-like nitrogen-regulatory protein PtsN	Putative PTS IIA-like nitrogen-regulatory protein PtsN	
ECOLI02028	D-tagatose-1,6-bisphosphate aldolase subunit gatZ	pseudo	putative tagatose 6-phosphate kinase	Putative tagatose 6-phosphate kinase gatZ	D-tagatose-1,6-bisphosphate aldolase subunit gatZ	Residues 1 to 420 of 420 are 98 pct identical to residues 1 to 420 of a 420 aa protein from Escherichia coli O157:H7 ref: NP_310925.1 putative tagatose 6-phosphate kinase 1	Putative tagatose 6-phosphate kinase agaZ	putative tagatose 6-phosphate kinase 1	similar to Salmonella typhimurium putative tagatose 6-phosphate kinase 1 putative tagatose 6-phosphate kinase 1	D-tagatose-1,6-bisphosphate aldolase subunit gatZ	D-tagatose-1,6-bisphosphate aldolase subunit gatZ	D-tagatose-1,6-bisphosphate aldolase subunit gatZ	Tagatose 6-phosphate kinase	Tagatose-6-phosphate kinase precursor	putative tagatose 6-phosphate kinase 1 Code: G; COG: COG4573	putative tagatose 6-phosphate kinase GatZ	Putative tagatose 6-phosphate kinase 1	D-tagatose-bisphosphate aldolase, class II, non- catalytic subunit	Putative tagatose-6-phosphate kinase	D-tagatose-bisphosphate aldolase, class II, non- catalytic subunit	Putative tagatose-6-phosphate kinase	Tagatose-6-phosphate kinase	Putative uncharacterized protein	Putative tagatose-6-phosphate kinase	Putative tagatose 6-phosphate kinase 1	D-tagatose-bisphosphate aldolase, class II, non- catalytic subunit	D-tagatose-bisphosphate aldolase, class II, non- catalytic subunit	D-tagatose-bisphosphate aldolase, class II, non- catalytic subunit	Putative sugar kinase	
ECOLI02029	D-tagatose-1,6-bisphosphate aldolase subunit gatY	Tagatose-bisphosphate aldolase gatY	identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167 tagatose-bisphosphate aldolase	D-tagatose-1,6-bisphosphate aldolase subunit gatY	Tagatose-bisphosphate aldolase	Residues 1 to 286 of 286 are 98 pct identical to residues 1 to 286 of a 286 aa protein from Escherichia coli K12 ref: NP_416599.1 tagatose-bisphosphate aldolase 1	IPR000771: Ketose-bisphosphate aldolase, class-II tagatose-bisphosphate aldolase	tagatose-bisphosphate aldolase, fructose-bisphosphate aldolase, class II	Code: G; COG: COG0191 tagatose-bisphosphate aldolase 1	identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859 fructose-1,6-bisphosphate aldolase, class II	Code: G; COG: COG0191 tagatose-bisphosphate aldolase 1	Code: G; COG: COG0191 tagatose-bisphosphate aldolase 1	D-tagatose-1,6-bisphosphate aldolase subunit gatY	putative tagatose-1,6-bisphosphate aldolase identified by similarity to SP:P37192; match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01858	D-tagatose-1,6-bisphosphate aldolase subunit gatY	class II aldolase, tagatose bisphosphate family identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01858	tagatose-bisphosphate aldolase 1 Code: G; COG: COG0191	tagatose-bisphosphate aldolase GatY	Class II aldolase, tagatose bisphosphate family	Fructose-bisphosphate aldolase	D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit	Class II aldolase, tagatose bisphosphate family	Class II aldolase, tagatose bisphosphate family	Class II aldolase, tagatose bisphosphate family	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	Class II aldolase, tagatose bisphosphate family	D-tagatose-1,6-bisphosphate aldolase subunit gatY	D-tagatose-1,6-bisphosphate aldolase subunit gatY	
ECOLI02030	Fructose-bisphosphate aldolase class 1	Putative aldolase Vng0683c	similar to SP:P32411; identified by sequence similarity; putative fructose-bisphosphate aldolase, class I	Putative uncharacterized protein	Fructose-bisphosphate aldolase class I	Fructose-bisphosphate aldolase class I	Fructose-bisphosphate aldolase class I	Probable fructose-1,6-bisphosphate aldolase	Fructose-bisphosphate aldolase class I	Fructose-bisphosphate aldolase, putative	Probable fructose-bisphosphate aldolase class 1	FBP aldolase, class I	Fructose-bisphosphate aldolase class 1	Fructose-bisphosphate aldolase class I	PMID: 9531482 best DB hits: BLAST: pir:H64976; hypothetical protein b2097 - Escherichia coli (strain; E=1e-119 swissprot:P71295; ALF1_ECOLI FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS; E=1e-119 gb:AAB18249.1; (U73760) dehydrin [Escherichia coli]; E=1e-117 COG: fbaB; COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and; E=1e-120 fructose-bisphosphate aldolase class I	fructose-bisphosphate aldolase class I	Putative uncharacterized protein	Probable fructose-bisphosphate aldolase class I	Fructose-bisphosphate aldolase	Residues 1 to 350 of 350 are 99 pct identical to residues 25 to 374 of a 374 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288599.1 orf, conserved hypothetical protein	Probable fructose-bisphosphate aldolase class 1	Fructose-biphosphate aldolase class I	3-oxoacyl-[acyl-carrier-protein] synthase I	DhnA-type fructose-1,6-bisphosphate aldolase	similar to Salmonella typhi CT18 fructose-bisphosphate aldolase class I fructose-bisphosphate aldolase class I	Similar to Escherichia coli, and Escherichia coli O6 fructose-bisphosphate aldolase class I FbaB or DhnA SWALL:ALF1_ECOLI (SWALL:P71295) (349 aa) fasta scores: E(): 1.3e-88, 61.6% id in 349 aa, and to Salmonella typhi, and Salmonella typhimurium fructose-bisphosphate aldolase class I FbaB or t0715 or stm2141 or sty2370 SWALL:Q8XFP7 (EMBL:AE016836) (350 aa) fasta scores: E(): 2.1e-89, 62% id in 350 aa fructose-bisphosphate aldolase class I	Similar to sp|Q9PKH8|ALF1_CHLMU sp|O84217|ALF1_CHLTR sp|P71295|ALF1_ECOLI sp|Q9Z8Q7|ALF1_CHLPN; Ortholog to ERGA_CDS_00560 Probable fructose-bisphosphate aldolase class I	COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase similar to NP_288599.1 fructose-bisphosphate aldolase	COG1830 fructose-bisphosphate aldolase	
ECOLI02031	Putative nucleoside transporter yegT	Putative nucleoside permease	Putative nucleoside transporter yegT	Putative nucleoside permease protein	IPR007114: Major facilitator superfamily putative MFS family transport protein	similar to Salmonella typhi CT18 putative nucleoside permease putative nucleoside permease	Putative MFS family transport protein	Code: GEPR; COG: COG0477 putative nucleoside permease protein	Code: GEPR; COG: COG0477 putative nucleoside permease protein	Nucleoside:H+ symporter	nucleoside:H+ symporter	Code: GEPR; COG: COG0477 putative nucleoside permease protein	Putative nucleoside transporter YegT	Putative nucleoside transporter YegT	nucleoside:proton symporter	nucleoside:H+ symporter PFAM: nucleoside:H+ symporter; major facilitator superfamily MFS_1 KEGG: csa:Csal_0765 nucleoside:H+ symporter	putative nucleoside permease protein Code: GEPR; COG: COG0477	putative nucleoside transporter	Nucleoside transporter	Predicted nucleoside transporter	Nucleoside transporter	Nucleoside transporter	Nucleoside transporter	Putative uncharacterized protein	Permease	Permease, MFS superfamily; putative membrane protein	Putative uncharacterized protein	Nucleoside transporter	Putative nucleoside permease protein	
ECOLI02032	Uncharacterized protein yegU	ADP-ribosylglycohydrolase	ADP-ribosylglycohydrolase	Uncharacterized protein AF_1724	Putative uncharacterized protein	ADP-ribosylglycohydrolase (DraG) homolog	Putative hydrolase	BvrC protein	Hypothetical protein yegU	similar to ADP-ribosylglycohydrolase	Putative uncharacterized protein	hypothetical protein	identified by match to protein family HMM PF03747 ADP-ribosylglycohydrolase, putative	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark dinitrogenase reductase activationg glycohydrolase	IPR005502: ADP-ribosylglycohydrolase putative glycohydrolase	similar to Salmonella typhi CT18 putative hydrolase putative hydrolase	Putative glycohydrolase	identified by match to protein family HMM PF03747 ADP-ribosylglycohydrolase family protein	ADP-ribosylglycohydrolase	Code: O; COG: COG1397 conserved hypothetical protein	dinitrogenase reductase activating glycohydrolase ADP-ribosylglycohydrolase	Code: O; COG: COG1397 conserved hypothetical protein	ADP-ribosylhydrolase like 2 [Source:HGNC Symbol;Acc:21304]	ADP-ribosylglycohydrolase, putative identified by match to protein family HMM PF03747	ADP-ribosylation/Crystallin J1	ADP-ribosylglycohydrolase COG1397	Code: O; COG: COG1397; orf conserved hypothetical protein	transcript_id=ENSETET00000007645	transcript_id=ENSGACT00000016826	
ECOLI02034	Uncharacterized HTH-type transcriptional regulator yegW	GntR family transcriptional regulator	Putative HTH-type transcriptional regulator yegW	Transcriptional regulator, GntR family	Uncharacterized HTH-type transcriptional regulator yegW	transcription regulator	Lin2112 protein	IPR000524: Bacterial regulatory protein, GntR family putative regulatory protein, gntR family	similar to Salmonella typhi Ty2 putative GntR-family transcriptional regulator putative GntR-family transcriptional regulator	Putative gntR family regulatory protein	identified by similarity to SP:P76420; match to protein family HMM PF00392; match to protein family HMM PF07702 transcriptional regulator, GntR family	Code: K; COG: COG2188 putative transcriptional regulator	Code: K; COG: COG2188 putative transcriptional regulator	Code: K; COG: COG2188 putative transcriptional regulator	Transcriptional regulator, GntR family	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH: (6.1e-19) UbiC transcription regulator-associated: (3.3e-15) KEGG: atc:AGR_L_3074 transcription regulator, GntR family, ev=2e-64, 55% identity	GntR family transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07702	Hypothetical transcriptional regulator YegW	Putative transcriptional regulator	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein KEGG: bur:Bcep18194_A5864 transcriptional regulator, GntR family	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein KEGG: bcn:Bcen_1920 transcriptional regulator, GntR family	Transcriptional regulator, GntR family	transcriptional regulator, GntR family identified by match to protein family HMM PF00392; match to protein family HMM PF07702	putative transcriptional regulator	GntR-family protein transcriptional regulator	putative transcriptional regulator	Transcriptional regulator, GntR family	UbiC transcription regulator-associated domain protein	Transcriptional regulator, GntR family	
ECOLI02033	Uncharacterized sugar kinase yegV	Putative sugar kinase	Hypothetical sugar kinase yegV	Putative kinase	ribokinase	Residues 1 to 321 of 321 are 97 pct identical to residues 1 to 321 of a 321 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288602.1 putative kinase	Similar to sugar kinase	identified by match to protein family HMM PF00294 ribokinase, putative	IPR002139: Ribokinase; IPR002173: Carbohydrate kinase, PfkB putative sugar kinase	similar to Salmonella typhi CT18 putative sugar kinase putative sugar kinase	Putative sugar kinase	identified by match to protein family HMM PF00294 carbohydrate kinase, PfkB family	Carbohydrate kinase, PfkB	Code: G; COG: COG0524 putative kinase	Code: G; COG: COG0524 putative kinase	PfkB	Code: G; COG: COG0524 putative kinase	Hypothetical sugar kinase YegV	Hypothetical sugar kinase YegV	Sugar kinase, ribokinase family	Sugar kinase, ribokinase family	putative kinase Code: G; COG: COG0524	putative sugar kinase	putative sugar kinase	Kinase, PfkB family	Sugar kinase	Predicted kinase	Kinase, PfkB family	Kinase, PfkB family	
ECOLI02035	Uncharacterized protein yegX	Putative lysozyme	Putative glycosylhydrolase	Lysozyme M1	Putative uncharacterized protein	Hypothetical protein yegX	Glycosyl hydrolase, family 25	Putative glycosyl hydrolase	Lysozyme M1	Uncharacterized protein yegX	SCCB12.10c, probable secreted hydrolase, len: 275 aa; similar to SW:LYCM_STRGL (EMBL:M30645) Streptomyces globisporus lysozyme M1 precursor (EC 3.2.1.17) Acm, 294 aa; fasta scores: opt: 828 z-score: 944.2 E(): 0; 45.7% identity in 291 aa overlap and to TR:Q9RJP9 (EMBL:AL132991) Streptomyces coelicolor putative lysozyme precursor SCF55.15, 279 aa; fasta scores: opt: 1425 z-score: 1618.9 E(): 0; 75.2% identity in 270 aa overlap.  Contains Pfam match to entry PF01183 Glyco_hydro_25, Glycosyl hydrolases family 25 and 2x matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible N-terminal region signal peptide sequence (possibly cleavable) putative secreted hydrolase	Residues 1 to 273 of 276 are 94 pct identical to residues 1 to 273 of a 275 aa protein from Escherichia coli K12 ref: NP_416605.1 orf, conserved hypothetical protein	identified by match to protein family HMM PF01183 glycosyl hydrolase, family 25	Autolytic lysozyme	Cell-wall lytic enzyme	Putative uncharacterized protein	similar to BR1447, glycosyl hydrolase, family 25 glycosyl hydrolase, family 25	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative lysozyme	Similar to Escherichia coli hypothetical protein YegX or B2102 SWALL:YEGX_ECOLI (SWALL:P76421) (272 aa) fasta scores: E(): 8.5e-35, 41.05% id in 246 aa, and to Shigella flexneri hypothetical protein YegX or S2289 SWALL:AAP17521 (EMBL:AE016985) (273 aa) fasta scores: E(): 1.8e-34, 40.4% id in 250 aa putative hydrolase	N,O-diacetyl muramidase, putative	Code: M; COG: COG3757 conserved hypothetical protein	Glycoside hydrolase, family 25	Code: M; COG: COG3757 conserved hypothetical protein	Putative uncharacterized protein	Glycosyl hydrolase, family 25	Putative uncharacterized protein yegX	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	glycoside hydrolase, family 25 PFAM: glycoside hydrolase, family 25 KEGG: sil:SPO3258 glycosyl hydrolase, family 25	
ECOLI02036	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Hydroxymethylpyrimidine phosphate kinase	Phosphomethylpyrimidine kinase	Transcriptional regulator	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Putative phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Probable phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	ThiD	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase	Phosphomethylpyrimidine kinase	Phosphomethylpyrimidine kinase	
ECOLI02037	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase family	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Probable hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	putative hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase 1	identified by match to protein family HMM PF02110; match to protein family HMM TIGR00694 hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase	
ECOLI02038	Transcriptional repressor rcnR	Putative uncharacterized protein	Transcriptional repressor rcnR homolog	All2756 protein	Hypothetical protein yohL	hypothetical protein	Transcriptional repressor rcnR	Residues 1 to 90 of 90 are 100 pct identical to residues 1 to 90 of a 90 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288611.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	identified by similarity to OMNI:SA2078; match to protein family HMM PF02583 conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein SE1686	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR003735: Protein of unknown function DUF156 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2175 conserved hypothetical protein	conserved hypothetical protein	Transcriptional repressor rcnR	conserved hypothetical protein	Code: S; COG: COG1937 conserved hypothetical protein	identified by match to protein family HMM PF02583 conserved hypothetical protein	No putative conserved domains have been detected and there is little conservation to putative proteins in other genomes. hypothetical protein	Protein of unknown function DUF156	conserved domain protein identified by similarity to PIR:AE2150; match to protein family HMM PF02583	conserved hypothetical protein identified by match to protein family HMM PF02583	
ECOLI02039	Nickel/cobalt efflux system rcnA	Putative nickel/cobalt efflux system MJ1092	pseudo	Nickel/cobalt efflux system rcnA	Putative membrane protein	Putative membrane protein	PMID: 8688087 best DB hits: BLAST: swissprot:Q58492; YA92_METJA HYPOTHETICAL PROTEIN MJ1092 -----; E=5e-07 swissprot:P76425; YOHM_ECOLI HYPOTHETICAL 30.4 KDA PROTEIN IN; E=0.003 gb:AAG57167.1; AE005437_2 (AE005437) orf, hypothetical protein; E=0.019 COG: MJ1092; COG2215 Predicted membrane protein; E=5e-08 conserved hypothetical protein	Membrane protein, putative	Putative membrane protein	hypothetical protein	Nickel/cobalt efflux system rcnA	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1788423 (275 aa). BLAST with identity of 98% in 277 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Putative efflux nickel/cobalt transmembrane protein	identified by match to protein family HMM PF03824 membrane protein, putative	Putative uncharacterized protein	Nickel ABC transporter	similar to Salmonella typhimurium putative inner membrane protein putative inner membrane protein	Membrane protein, putative	Nickel/cobalt efflux system rcnA	identified by match to protein family HMM PF03824 high-affinity nickel-transport protein	High-affinity nickel-transporter	Code: R; COG: COG2215 conserved hypothetical protein	high-affinity nickel-transporter	putative high-affinity nickel-transport protein	Code: R; COG: COG2215; orf conserved hypothetical protein	high-affinity nickel-transporter	Nickel/cobalt efflux system rcnA	Nickel/cobalt efflux system rcnA	high-affinity nickel-transporter	
ECOLI02040	Uncharacterized protein yohN	Hypothetical protein yohN precursor	Putative uncharacterized protein	Residues 1 to 112 of 112 are 99 pct identical to residues 1 to 112 of a 112 aa protein YOHN_ECOLI sp: P76426 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative periplasmic protein	Code: S; COG: COG5455 conserved hypothetical protein	Code: S; COG: COG5455; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yohN	conserved hypothetical protein Code: S; COG: COG5455	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein yohN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02041	Uncharacterized protein yehA	Hypothetical protein yehA	Residues 1 to 270 of 271 are 96 pct identical to residues 1 to 270 of a 344 aa protein from Escherichia coli K12 ref: NP_416611.1 putative type-1 fimbrial protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative outer membrane lipoprotein	putative type-1 fimbrial protein	Putative uncharacterized protein	Putative Yeh fimbiral adhesin YehA	putative type-1 fimbrial protein	fimbrial-like adhesin protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative type-1 fimbrial protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative fimbrial protein	Putative exported protein	Putative uncharacterized protein	Putative outer membrane lipoprotein	Putative exported protein	Putative fimbrial protein	Putative exported fimbrial-like adhesin protein	Putative exported fimbrial-like adhesin protein	Putative exported fimbrial-like adhesin protein	
ECOLI02042	Uncharacterized outer membrane usher protein yehB	Putative outer membrane usher protein	Hypothetical outer membrane usher protein yehB	Putative outer membrane protein	Residues 6 to 831 of 831 are 97 pct identical to residues 1 to 826 of a 826 aa protein from Escherichia coli K12 ref: NP_416612.1 putative outer membrane protein	Similar to outer membrane usher protein	IPR000015: Fimbrial biogenesis outer membrane usher protein paral putative outer membrane protein	similar to Salmonella typhi CT18 putative outer membrane usher protein putative outer membrane usher protein	Putative outer membrane protein	Code: NU; COG: COG3188 putative outer membrane protein	Hypothetical outer membrane usher protein YehB	Putative outer membrane usher protein YehB	putative outer membrane protein Code: NU; COG: COG3188	putative outer membrane usher protein YehB precursor	Putative uncharacterized protein	Fimbrial usher protein	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial biogenesis outer membrane usher protein	Predicted outer membrane protein	Fimbrial usher protein	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial usher protein	Fimbrial usher protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative outer membrane usher protein	Fimbrial usher protein	Fimbrial usher protein	Fimbrial usher protein	
ECOLI02043	Uncharacterized fimbrial chaperone yehC	Hypothetical fimbrial chaperone yehC	Putative chaperone protein	Putative fimbrial chaperone	Similar to putative chaperone	IPR001829: Bacterial pili assembly chaperone putative periplasmic chaperone protein	similar to Salmonella typhi CT18 putative fimbrial chaperone protein putative fimbrial chaperone protein	Putative periplasmic chaperone protein	Code: NU; COG: COG3121 putative chaperone	Hypothetical fimbrial chaperone YehC	Putative fimbrial chaperone precursor	Putative periplasmic chaperone YehC	putative chaperone Code: NU; COG: COG3121	Fimbrial chaperone precursor	putative fimbrial chaperone YehC precursor	Putative uncharacterized protein	Gram-negative pilus assembly chaperone	Predicted periplasmic pilin chaperone	Gram-negative pilus assembly chaperone	Pili assembly chaperone precursor	P pilus assembly protein, chaperone PapD	Putative pilin chaperone	Putative uncharacterized protein	Putative uncharacterized protein	Gram-negative pili assembly chaperone	Putative fimbrial chaperone protein	Gram-negative pilus assembly chaperone	Gram-negative pilus assembly chaperone	Gram-negative pilus assembly chaperone	
ECOLI02044	Uncharacterized protein yehD	Hypothetical protein yehD	Putative fimbrial-like protein	Residues 1 to 174 of 174 are 96 pct identical to residues 1 to 180 of a 180 aa protein from Escherichia coli K12 ref: NP_416614.1 putative fimbrial-like protein	IPR000504: RNA-binding region RNP-1 (RNA recognition motif) paral putative fimbrial-like protein	similar to Salmonella typhi CT18 putative fimbrial subunit protein putative fimbrial subunit protein	Putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Putative uncharacterized protein	Putative Yeh fimbriae subunit YehD	putative fimbrial-like protein Code: NU; COG: COG3539	Putative uncharacterized protein	Fimbrial protein	Predicted fimbrial-like adhesin protein	Fimbrial protein	Fimbrial protein precursor	Fimbrial protein	Putative uncharacterized protein	Putative uncharacterized protein	Fimbrial protein	Putative fimbrial subunit protein	Putative fimbrial subunit protein	Fimbrial protein	Putative fimbrial subunit protein	Putative fimbrial subunit protein	Putative fimbrial subunit protein	Fimbrial protein	Putative fimbrial subunit protein	Putative fimbrial subunit protein	
ECOLI02045	Uncharacterized protein yehE	Hypothetical protein yehE	Putative uncharacterized protein yehE	putative outer membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative outer membrane protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yehE	putative fimbrial-like adhesin protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yehE	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yehE	Putative uncharacterized protein	Putative uncharacterized protein yehE	
ECOLI02046	Protein mrp	similar to tr|Q8TB37 Homo sapiens Hypothetical protein, hypothetical start	Mrp protein	MRP-family nucleotide-binding protein	ParA family protein	Polysaccharide export protein	Protein mrp homolog	Putative uncharacterized protein	Protein mrp homolog	Mrp protein homolog	DEHA2D18524p;similar to uniprot|P40558 Saccharomyces cerevisiae YIL003W CFD1 Highly conserved putative P-loop ATPase localized in the cytoplasm;	Nucleotide-binding protein	ATP-binding protein, Mrp/Nbp35 family	Putative ATP-binding protein	Putative uncharacterized protein mrp	Protein mrp homolog	MRP protein homolog	Nucleotide-binding protein	MRP protein homolog	GTP-binding protein, Mrp/Nbp345 family	Mrp/NBP35 family protein	Mrp	Putative uncharacterized protein	Putative ATP/GTP-binding protein	Putative uncharacterized protein	Mrp protein	Protein mrp homolog	Mrp protein-like protein	Mrp protein	
ECOLI02047	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	tRNA ligase, putative	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	Methionyl-tRNA synthetase	putative methionyl-tRNA synthetase	



ECOLI02049	Uncharacterized protein yehI	Putative regulator	similar to Escherichia coli K12 putative regulator ref: NP_416621.1 (1210 aa). BLAST with identity of 81% in 1215 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	putative regulator	Putative uncharacterized protein	Putative uncharacterized protein yehI	conserved hypothetical protein	Conserved protein	Molybdate metabolism regulator MolR homolog	Putative regulator	Molybdate metabolism regulator MolR homolog	Molybdate metabolism regulator MolR homolog	Putative regulator	Putative uncharacterized protein yehI	Putative uncharacterized protein yehI	Putative uncharacterized protein yehI	Putative uncharacterized protein yehI	Predicted protein	Putative uncharacterized protein yehI	YehI protein	Conserved protein	Conserved protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI02050	Uncharacterized protein yehK	Residues 1 to 105 of 135 are 92 pct identical to residues 1 to 105 of a 105 aa protein from Escherichia coli K12 ref: NP_416622.1 Uncharacterized conserved protein	Uncharacterized conserved protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yehK	Putative uncharacterized protein yehK	Putative uncharacterized protein yehK	Putative uncharacterized protein yehK	YehK protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI02051	Uncharacterized protein yehL	Hypothetical protein yehL	PMID: 97000351 best DB hits: BLAST: embl:CAB61595.1; (AL133210) hypothetical protein SCG11A.14; E=3e-96 gb:AAG57184.1; AE005439_3 (AE005439) orf, hypothetical protein; E=1e-69 swissprot:P33348; YEHL_ECOLI HYPOTHETICAL 42.4 KD PROTEIN IN; E=3e-69 COG: yehL; COG0714 MoxR-like ATPases; E=3e-70 conserved hypothetical protein	Putative uncharacterized protein yehL	Putative uncharacterized protein	Residues 1 to 362 of 362 are 100 pct identical to residues 23 to 384 of a 384 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288629.1 orf, conserved hypothetical protein	Code: R; COG: COG0714 conserved hypothetical protein	ATPase AAA_5 associated with various cellular activities	MoxR-like ATPase COG0714	Putative uncharacterized protein	Putative uncharacterized protein yehL	MoxR-like ATPase cytoplasmic protein	MoxR-like ATPase cytoplasmic protein	ATPase associated with various cellular activities, AAA_5 PFAM: ATPase associated with various cellular activities, AAA_5 KEGG: lic:LIC12902 hypothetical protein	putative ATPase	ATPase associated with various cellular activities, AAA_5	ATPase associated with various cellular activities, AAA_5	ATPase, AAA family	ATPase associated with various cellular activities, AAA_5	Predicted transporter subunit: ATP-binding component of ABC superfamily	ATPase, AAA family	ATPase associated with various cellular activities AAA_5	ATPase, AAA family	ATPase associated with various cellular activities AAA_5	Putative ATPase	ATPase, AAA family	Putative uncharacterized protein	Putative ABC superfamily protein	Putative ABC superfamily protein	
ECOLI02052	Uncharacterized protein yehM	Hypothetical protein yehM	Putative uncharacterized protein	Putative uncharacterized protein	Residues 26 to 784 of 784 are 96 pct identical to residues 1 to 759 of a 759 aa protein from Escherichia coli K12 ref: NP_416624.1 orf, conserved hypothetical protein	conserved hypothetical protein	hypothetical protein	4-aminobutyrate aminotransferase and related aminotransferase COG0160	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yehM	Putative uncharacterized protein yehM	Putative uncharacterized protein yehM	Putative uncharacterized protein yehM	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein yehM	YehM protein	
ECOLI02053	Uncharacterized protein yehP	Hypothetical protein yehP	Putative uncharacterized protein yehP	Putative uncharacterized protein	Residues 22 to 399 of 399 are 98 pct identical to residues 1 to 378 of a 378 aa protein from Escherichia coli K12 ref: NP_416625.1 orf, conserved hypothetical protein	conserved hypothetical protein	VWA containing CoxE-like protein	VWA_CoxE family protein	Putative uncharacterized protein	Putative uncharacterized protein yehP	conserved hypothetical protein	VWA containing CoxE family protein	von Willebrand factor type A domain protein	VWA containing CoxE family protein	Conserved protein	von Willebrand factor type A domain protein	von Willebrand factor type A domain protein	VWA containing CoxE family protein	Putative uncharacterized protein	von Willebrand factor type A domain protein	Putative uncharacterized protein	Putative uncharacterized protein yehP	Putative uncharacterized protein yehP	Putative uncharacterized protein yehP	Putative uncharacterized protein yehP	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein yehP	
ECOLI02054	Putative uncharacterized protein yehQ	Hypothetical protein yehQ	Putative uncharacterized protein yehQ	Putative uncharacterized protein	Residues 9 to 675 of 675 are 96 pct identical to residues 1 to 667 of a 745 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288633.1 yehQ gene product	Code: L; COG: COG2801 conserved hypothetical protein	Code: L; COG: COG2801 conserved hypothetical protein	conserved hypothetical protein	Transposase and inactivated derivatives COG2801	Putative uncharacterized protein	Putative uncharacterized protein yehQ	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Zinc finger SWIM domain protein	Putative uncharacterized protein	Zinc finger SWIM domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yehQ	Putative uncharacterized protein yehQ	Putative uncharacterized protein yehQ	Putative uncharacterized protein yehQ	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein yehQ	YehQ protein	

ECOLI02055	Uncharacterized lipoprotein yehR	Putative lipoprotein	Uncharacterized lipoprotein Lmo0207	Hypothetical lipoprotein yehR	Putative uncharacterized protein	Putative uncharacterized protein yehR	CDS_ID OB3246 hypothetical protein	Uncharacterized lipoprotein Lin0239	Residues 1 to 157 of 157 are 99 pct identical to residues 1 to 157 of a 157 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288636.1 orf, conserved hypothetical protein	Putative uncharacterized protein	lipoprotein, putative	Hypothetical protein SE2029	putative lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2546 putative lipoprotein	conserved hypothetical protein	lipoprotein, putative	Putative lipoprotein	similar to unknown protein	Similar to Listeria monocytogenes hypothetical lipoprotein precursor SW:YORZ_LISMO (P33385) (153 aa) fasta scores: E(): 7.9e-12, 40.39% id in 151 aa, and to Escherichia coli hypothetical lipoprotein precursor YehR SW:YEHR_ECOLI (P33354) (153 aa) fasta scores: E(): 1.8e-08, 34.89% id in 149 aa putative lipoprotein	Code: S; COG: COG4808 conserved hypothetical protein	identified by match to protein family HMM PF06998 lipoprotein, putative	Code: S; COG: COG4808 conserved hypothetical protein	putative lipoprotein identified by match to protein family HMM PF06998	probable lipoprotein	Code: S; COG: COG4808; orf conserved hypothetical protein	Hypothetical lipoprotein YehR	conserved hypothetical protein	
ECOLI02056	Uncharacterized protein yehS	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Putative uncharacterized protein STY2387	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical Cytosolic Protein	Putative uncharacterized protein	conserved hypothetical protein	Hypothetical protein yehS	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yehS	Uncharacterized protein conserved in bacteria	Residues 20 to 127 of 130 are 96 pct identical to residues 1 to 108 of a 156 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288637.1 orf, conserved hypothetical protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	
ECOLI02057	Uncharacterized response regulatory protein yehT	Sensory transduction protein lytT	Response regulator	Uncharacterized response regulatory protein yehT	putative response regulator	Hypothetical response regulatory protein yehT	DNA-binding response regulator LytR	Uncharacterized response regulatory protein VC_0693	Uncharacterized response regulatory protein SO_2823	Putative two-component system response regulator	Uncharacterized response regulatory protein VP0538	Uncharacterized response regulatory protein yehT	DNA-binding response regulator	Uncharacterized response regulatory protein VV1_0503	Residues 1 to 244 of 244 are 99 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288638.1 orf, conserved hypothetical protein	Uncharacterized response regulatory protein YPO3287/y0902/YP_0397	Sensory transduction protein lytR	Probable two-component response regulator transcription regulator protein	Similar to unknown protein YehT of Escherichia coli	Probable transcriptional regulator protein	IPR001789: Response regulator receiver putative regulator	similar to Salmonella typhi CT18 putative two-component system response regulator putative two-component system response regulator	Putative two-component system response regulator	two-component response regulator	two-component response regulator	Response regulator of the LytR/AlgR family	Uncharacterized response regulatory protein yehT	Response regulator receiver:LytTr DNA-binding region	response regulator receiver	
ECOLI02058	Inner membrane protein yehU	Putative regulator of cell autolysis	Putative two-component system sensor kinase	hypothetical LytS, regulator of cell autolysis	Inner membrane protein yehU precursor	Putative uncharacterized protein	Two-component sensor histidine kinase	Putative uncharacterized protein VP0539	Putative 2-component sensor protein	Putative regulator of cell autolysis	Residues 6 to 566 of 566 are 100 pct identical to residues 1 to 561 of a 561 aa protein from Escherichia coli K12 ref: NP_416630.1 putative 2-component sensor protein	Probable two-component system sensor kinase	InterProMatches:IPR002358; involved in controlling the rate of autolysis,Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: protein biosynthesis (GO:0006412) two-component sensor histidine kinase	paral putative sensor/kinase in regulatory system	similar to Salmonella typhi CT18 putative two-component system sensor kinase putative two-component system sensor kinase	hypothetical protein	Putative sensor/kinase in regulatory system	GAF:ATP-binding region, ATPase-like:Histidine kinase internal region:5TM Receptors of the LytS-YhcK type, transmembrane region	Code: T; COG: COG3275 putative 2-component sensor protein	identified by similarity to SP:P33357; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF06580; match to protein family HMM PF07694 sensor histidine kinase	Code: T; COG: COG3275 putative 2-component sensor protein	Histidine kinase internal region	histidine kinase internal region	Code: T; COG: COG3275 putative 2-component sensor protein	Signal Transduction Histidine Kinase (STHK), LytS	Putative uncharacterized protein	Signal transduction histidine kinase, LytS	Putative 2-component sensor protein	histidine kinase internal protein	
ECOLI02059	HTH-type transcriptional regulator mlrA	Putative transcriptional regulator	MerR-like regulator A	pseudo	IPR000551: Bacterial regulatory protein, MerR family putative transcriptional repressor (MerR family)	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	HTH-type transcriptional regulator mlrA	identified by match to protein family HMM PF00376 transcriptional regulator, MerR family	Code: K; COG: COG0789 putative transcriptional regulator	Code: K; COG: COG0789 putative transcriptional regulator	Code: K; COG: COG0789 putative transcriptional regulator	MerR-like regulator A	Putative transcriptional regulator	Transcriptional regulator, MerR family	MerR-like regulator A	Putative transcriptional regulator, MerR family	Putative uncharacterized protein	Transcriptional regulator MlrA	DNA-binding transcriptional regulator	Transcriptional regulator, MerR family	Transcriptional regulator MlrA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	HTH-type transcriptional regulator MlrA	Putative transcriptional regulator	Transcriptional regulator, MerR family protein	Transcriptional regulator, MerR family protein	Transcriptional regulator, MerR family protein	
ECOLI02061	Putative osmoprotectant uptake system permease protein yehW	Putative permease transmembrane component	Putative ABC transport system, membrane protein	Hypothetical ABC transporter permease protein yehW	identified by match to PFAM protein family HMM PF03631 ABC transporter, permease protein	Product confidence : putative Gene name confidence : hypothetical putative choline uptake ABC transporter permease protein	Putative ABC transporter permease	ABC transporter, permease protein	GLYCINE BETAINE/L-PROLINE TRANSPORT SYSTEM PERMEASE PROTEIN PROW	Putative transport system permease protein	ABC transporter, permease protein	Residues 1 to 243 of 243 are 98 pct identical to residues 1 to 243 of a 243 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288705.1 putative transport system permease protein	Putative ABC transport integral membrane subunit	Probable ABC transporter system, amino acid permease	Proline/glycine betaine ABC transporter	putative ABC-type proline/glycine betaine transport systems, permease component	similar to Salmonella typhi CT18 putative permease transmembrane component putative permease transmembrane component	similar to BR0222, ABC transporter, permease protein ABC transporter, permease protein	ABC type choline/glycine/betaine transporter, permease subunit	Putative ABC-type proline/glycine betaine transport system, permease component	Code: E; COG: COG1174 putative transport system permease protein	Binding-protein-dependent transport systems inner membrane component:Basic helix-loop-helix dimerization domain bHLH:Pollen a...	Code: E; COG: COG1174 putative transport system permease protein	binding-protein-dependent transport systems inner membrane component	binding-protein-dependent transport systems inner membrane component	ABC proline/glycine betaine transporter, inner membrane subunit	ABC-type proline/glycine betaine transport system, permease component COG1174	Code: E; COG: COG1174 putative transport system permease protein	putative component of ABC transporter similarity:fasta; with=UniProt:Q92V96 (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative choline uptake ABC transporter permease protein.; length=245; id 60.338; 237 aa overlap; query 7-243; subject 6-242	
ECOLI02062	Putative osmoprotectant uptake system ATP-binding protein yehX	Osmoprotection protein	Probable glycine betaine/carnitine/choline ABC transporter	Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein	Amino acid ABC transporter, ATP-binding protein	ABC transporter, nucleotide binding/ATPase protein	ABC transporter ATP-binding protein	Glycine betaine transport ATP-binding protein	Putative ABC transport system, ATP-binding protein	Hypothetical ABC transporter ATP-binding protein yehX	Glycine betaine/carnitine/choline ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Putative osmoprotectant amino acid ABC transporter, ATP-binding protein	Putative ATP-binding component of a transport system	similar to AL022121-107|CAA18080.1| percent identity: 52 in 272 aa putative transport system ATP-binding protein	ABC-type glycine betaine transport, ATP-binding protein	Residues 1 to 308 of 308 are 98 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli K12 ref: NP_416633.1 putative ATP-binding component of a transport system	Putative ABC transport ATP-binding subunit	Probable ABC transporter ATP-binding protein	Proline/glycine betaine ABC transporter	POSSIBLE OSMOPROTECTANT (GLYCINE BETAINE/CARNITINE/CHOLINE/L-PROLINE) TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER PROV	Mb3784c, proV, len: 376 aa. Equivalent to Rv3758c, len: 376 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 376 aa overlap). Possible proV, osmoprotectant transport ATP-binding protein ABC transporter (see citation below), highly similar to osmoprotection proteins (proV) involved in glycine betaine/L-proline/choline transport, e.g.  BAB58610|Q99RI3|OPUCA|SA2237|SAV2448 GLYCINE BETAINE/CARNITINE/CHOLINE ABC TRANSPORTER (ATP-BINDING) from Staphylococcus aureus (410 aa), FASTA scores: opt: 816, E(): 8.4e-39, (39.5% identity in 362 aa overlap); O34992|OPCA_BACSU|OPUCA GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN from Bacillus subtilis (380 aa), FASTA scores: opt: 807, E(): 2.5e-38, (40.55% identity in 333 aa overlap); Q45460|OPBA_BACSU|OPUBA|PROV CHOLINE TRANSPORT ATP-BINDING PROTEIN from Bacillus subtilis (381 aa), FASTA scores: opt: 801, E(): 5.6e-38, (40.65% identity in 337 aa overlap); etc. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporter family signature. BELONGS TO THE ATP-BINDING TRANSPORT PROTEIN FAMILY (ABC TRANSPORTERS). POSSIBLE OSMOPROTECTANT (GLYCINE BETAINE/CARNITINE/CHOLINE/L-PROLINE) TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER PROV	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC-type proline/glycine betaine transport system, ATPase component	similar to Salmonella typhi CT18 ABC transporter ATP-binding protein ABC transporter ATP-binding protein	Putative uncharacterized protein gbs0235	identified by match to PFAM protein family HMM PF00005 amino acid ABC transporter, ATP-binding protein	ABC type choline/glycine/betaine transporter, ATP -binding subunit	Putative ABC-type proline/glycine betaine transport system, ATPase component	hypothetical protein, similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein)	
ECOLI02063	Putative osmoprotectant uptake system permease protein yehY	ABC transporter, membrane spanning protein	Putative permease transmembrane component	Putative ABC transport system, membrane protein	Hypothetical ABC transporter permease protein yehY	similar to SP:P33361; identified by sequence similarity; putative ABC transporter, permease protein	Product confidence : putative Gene name confidence : hypothetical putative choline uptake ABC transporter permease protein	ABC transporter, permease protein	GLYCINE BETAINE/L-PROLINE TRANSPORT SYSTEM PERMEASE PROTEIN PROW	Putative transport system permease protein	ABC transporter, permease protein	Residues 1 to 335 of 335 are 98 pct identical to residues 51 to 385 of a 385 aa protein from Escherichia coli O157:H7 ref: NP_311044.1 putative transport system permease protein	Putative ABC transport integral membrane subunit	Probable ABC transporter, permease protein	Proline/glycine betaine ABC transporter	IPR000515: Binding-protein-dependent transport systems inner membrane component putative ABC-type proline/glycine betaine transport systems, permease component	similar to Salmonella typhi CT18 putative permease transmembrane component putative permease transmembrane component	similar to BR0224, ABC transporter, permease protein ABC transporter, permease protein	ABC type choline/glycine/betaine transporter, permease subunit	Putative ABC-type proline/glycine betaine transport system, permease component	Code: E; COG: COG1174 putative transport system permease protein	Binding-protein-dependent transport systems inner membrane component	Code: E; COG: COG1174 putative transport system permease protein	binding-protein-dependent transport systems inner membrane component	ABC proline/glycine betaine transporter, inner membrane subunit	ABC-type proline/glycine betaine transport system, permease component COG1174	putative transmembrane component of ABC transporter similarity:fasta; with=UniProt:Q983A6 (EMBL:BA000012); Rhizobium loti (Mesorhizobium loti).; ABC transporter,permease protein. ABC transporter, permease protein.; length=387; id 55.496; 373 aa overlap; query 9-381; subject 4-376	binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component: (4.5e-20) KEGG: ssn:SSO_2187 putative transport system permease protein, ev=2e-58, 41% identity	Binding-protein-dependent transport systems inner membrane component	
ECOLI02064	Putative osmoprotectant uptake system substrate- binding protein osmF	ABC transporter, periplasmic substrate-binding protein, putative	ABC transporter, substrate binding protein	Putative periplasmic protein	Putative ABC transport system, exported protein	Hypothetical protein yehZ	similar to GP:15155085, and GP:17983752; identified by sequence similarity; putative ABC transporter, periplasmic substrate-binding protein, putative	Product confidence : putative Gene name confidence : hypothetical putative choline uptake ABC transporter periplasmic solute-binding protein precursor	ABC transporter, periplasmic glycine/betaine- binding protein, putative	GLYCINE BETAINE-BINDING PROTEIN	Putative transport system permease protein	ABC transporter, periplasmic substrate-binding protein	Residues 1 to 305 of 305 are 97 pct identical to residues 1 to 305 of a 305 aa protein from Escherichia coli K12 ref: NP_416635.1 putative transport system permease protein	pseudo	Glycine betaine/carnitine/choline ABC transporter	identified by similarity to EGAD:109208; match to protein family HMM PF04069 amino acid ABC transporter, amino acid-binding protein	Probable ABC transporter	Glycine betaine/carnitine/choline ABC transporter (Osmoprotec) opuCC	Glycine betaine ABC transporter	putative ABC superfamily (bind_prot) transport protein (possibly glycine betaine choline transport for osmoprotection)	similar to Salmonella typhi CT18 putative periplasmic protein putative periplasmic protein	similar to BR0225, ABC transporter, periplasmic substrate-binding protein hypothetical ABC transporter, periplasmic substrate-binding protein, hypothetical	glycine betaine/carnitine/choline ABC transporter opuCC (osmoprotec)	ABC type periplasmic choline/glycine/betaine binding protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2536 putative glycine betaine/carnitine/choline-binding lipoprotein precursor	glycine betaine/carnitine/choline ABC transporter opuCC	Putative ABC superfamily transport protein	glycine betaine/carnitine/choline ABC transporter opuCC	Similar to Bacillus subtilis glycine betaine/carnitine/choline-binding protein precursor OpuCC SW:OPCC_BACSU (O32243) (303 aa) fasta scores: E(): 3e-65, 56.2% id in 306 aa, and to Listeria monocytogenes substrate binding protein OpuCC TR:Q9KHT7 (EMBL:AF249729) (308 aa) fasta scores: E(): 1e-70, 60.51% id in 309 aa putative glycine betaine/carnitine/choline-binding lipoprotein precursor	
ECOLI02065	Periplasmic beta-glucosidase	Glycosyl hydrolase, family 3	Periplasmic beta-glucosidase	Periplasmic beta-glucosidase	Periplasmic beta-glucosidase	Periplasmic beta-glucosidase	Periplasmic beta-glucosidase	Beta-glucosidase	Beta-D-glucoside glucohydrolase, periplasmic	Residues 1 to 765 of 765 are 99 pct identical to residues 1 to 765 of a 765 aa protein from Escherichia coli K12 ref: NP_416636.1 beta-D-glucoside glucohydrolase, periplasmic	Putative glycosyl hydrolase	IPR001764: Glycoside hydrolase, family 3, N-terminal; IPR002772: Glycoside hydrolase, family 3, C-terminal beta-D-glucoside glucohydrolase, periplasmic	similar to Salmonella typhi CT18 periplasmic beta-glucosidase precursor periplasmic beta-glucosidase precursor	Putative glycosyl hydrolase	Periplasmic beta-glucosidase	Periplasmic beta-glucosidase	identified by similarity to SP:P33363; match to protein family HMM PF00933; match to protein family HMM PF01915 beta-glucosidase	identified by similarity to SP:P33363; match to protein family HMM PF00933; match to protein family HMM PF01915 periplasmic beta-glucosidase	Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal	Code: G; COG: COG1472 beta-D-glucoside glucohydrolase, periplasmic	Code: G; COG: COG1472 beta-D-glucoside glucohydrolase, periplasmic	glycoside hydrolase, family 3-like	Glycoside hydrolase, family 3-like	Code: G; COG: COG1472 beta-D-glucoside glucohydrolase, periplasmic	glycoside hydrolase, family 3-like	Periplasmic beta-glucosidase	Glycoside hydrolase, family 3 domain protein	Putative glycosyl hydrolase	glycoside hydrolase, family 3-like protein	

ECOLI02066	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	FAD/FMN-containing dehydrogenases	putative D-lactate dehydrogenase, FAD protein, NADH independent	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase, FAD protein, NADH independent	D-lactate dehydrogenase, FAD protein, NADH independent	Residues 1 to 571 of 571 are 99 pct identical to residues 1 to 571 of a 571 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288710.1 D-lactate dehydrogenase, FAD protein, NADH independent	D-lactate dehydrogenase	D-lactate dehydrogenase	D-lactate dehydrogenase, NADH independent	IPR003006: Immunoglobulin/major histocompatibility complex D-lactate dehydrogenase, NADH independent	similar to Salmonella typhi CT18 D-lactate dehydrogenase D-lactate dehydrogenase	D-lactate dehydrogenase	Putative D-lactate dehydrogenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme D-lactate dehydrogenase, NADH independent, FAD-binding domain	lactate dehydrogenase; COG0277 FAD/FMN-containing dehydrogenase	Similar to: HI1649, LDHD_HAEIN D-lactate dehydrogenase	NADH independent D-lactate dehydrogenase	D-Lactate dehydrogenase (NAD dependent)	Best Blastp Hit: pir||D81134 D-lactate dehydrogenase NMB0997 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7226237|gb|AAF41400.1| (AE002450) D-lactate dehydrogenase [Neisseria meningitidis MC58] COG0277 FAD/FMN-containing dehydrogenases putative D-lactate dehydrogenase	FAD protein; NADH independent; Code: C; COG: COG0277 D-lactate dehydrogenase	FAD protein; NADH independent; Code: C; COG: COG0277 D-lactate dehydrogenase	Code: C; COG: COG0277 D-lactate dehydrogenase, FAD protein	D-lactate dehydrogenase	
ECOLI02067	D-alanyl-D-alanine endopeptidase	Penicillin-binding protein 4	D-alanyl-D-alanine endopeptidase	pseudo	Serine-type D-Ala-D-Ala carboxypeptidase	Family S11 unassigned peptidase	Hypothetical D-alanyl-D-alanine endopeptidase	Penicillin-binding protein 7	D-alanyl-D-alanine carboxypeptidase	identified by match to protein family HMM PF00768 D-alanyl-D-alanine carboxypeptidase family protein	D-alanyl-D-alanine endopeptidase	Probable D-alanyl-D-alanine carboxypeptidase	Probable D-alanyl-D-alanine carboxypeptidase	D-alanyl-D-alanine endopeptidase	Penicillin-binding protein	D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein 7	Probable D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein 7	D-alanyl-D-alanine carboxypeptidase	Residues 1 to 310 of 310 are 100 pct identical to residues 4 to 313 of a 313 aa protein from Escherichia coli K12 ref: NP_416638.1 penicillin-binding protein 7	Penicillin-binding protein 7	Putative d-alanyl-d-alanine-endopeptidase	D-alanyl-D-alanine-endopeptidase	IPR001967: Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 D-alanyl-D-alanine endopeptidase; penicillin-binding protein 7 and penicillin-binding protein 8	similar to Escherichia coli K12 penicillin-binding protein 7 penicillin-binding protein 7	Penicillin-binding protein 7	Putative D-alanyl-D-alanine-endopeptidase	Evidence 2b : Function of strongly homologous gene; Product type e : enzyme D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and penicillin-binding protein 8	
ECOLI02068	Inner membrane protein yohC	Putative membrane protein	conserved hypothetical protein	Inner membrane protein yohC	Putative uncharacterized protein	Putative uncharacterized protein yohC	Residues 1 to 203 of 203 are 99 pct identical to residues 1 to 203 of a 203 aa protein from Escherichia coli K12 ref: NP_416639.1 orf, conserved hypothetical protein	Putative membrane protein	paral putative transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative uncharacterized protein	tRNA-(ms[2]io[6]A)-hydroxylase	Putative transport protein	putative membrane protein	identified by match to protein family HMM PF06930 conserved hypothetical protein	conserved hypothetical protein	Evidence 5 : No homology to any previously reported sequences putative orphan protein ; putative inner membrane protein	conserved hypothetical protein	protein of unknown function DUF1282	Protein of unknown function DUF1282	Amino acid transporters COG0531	orf conserved hypothetical protein	Putative membrane protein	Hypothetical protein	Hypothetical protein	Putative membrane protein	Rod shape-determining protein MreC, subtype	Hypothetical protein	
ECOLI02069	Inner membrane protein yohD	Putative uncharacterized protein	Putative integral membrane protein	Putative integral membrane protein	Putative membrane protein	All4799 protein	Hypothetical protein yohD	DedA family protein	Putative uncharacterized protein yohD	hypothetical protein	Alkaline phosphatase	SC3A7.25c, putative membrane protein, len: 228 aa; similar to many hypothetical proteins beloning to the DedA family e.g. DEDA_ECOLI DedA protein (DSG-1 protein) (219 aa), fasta scores; opt: 354 z-score: 391.7 E(): 1.4e-14, 34.2% identity in 199 aa overlap. Contains Pfam match to entry PF00597 DedA, DedA family, score 75.40, E-value 1.2e-18. Contains possible hydrophobic membrane spanning regions putative membrane protein	Putative uncharacterized protein	Residues 1 to 204 of 204 are 99 pct identical to residues 1 to 204 of a 204 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288713.1 orf, conserved hypothetical protein	identified by match to protein family HMM PF00597 DedA family protein	Putative uncharacterized protein	putative DedA family, membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	DedA family protein	Putative DedA family, membrane protein	identified by match to protein family HMM PF00597 DedA family protein	DedA	Code: S; COG: COG0586 conserved hypothetical protein	putative DedA family, membrane protein	Code: S; COG: COG0586 conserved hypothetical protein	DedA	DedA-family membrane protein	Integral membrane protein	
ECOLI02070	Uncharacterized oxidoreductase yohF	similar to Escherichia coli K12 putative oxidoreductase gi: 1788459 (254 aa). BLAST with identity of 95% in 253 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Code: IQR; COG: COG1028 putative oxidoreductase	Code: IQR; COG: COG1028 putative oxidoreductase	Code: IQR; COG: COG1028 putative oxidoreductase	Hypothetical oxidoreductase YohF	Putative oxidoreductase	putative oxidoreductase	Probable short-chain dehydrogenase/reductase	Short-chain dehydrogenase/reductase SDR	Putative 3-oxoacyl-[acyl-carrier-protein] reductase	Predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative 3-oxoacyl-[acyl-carrier-protein] reductase	Short-chain dehydrogenase/reductase SDR	Putative 3-oxoacyl-[acyl-carrier-protein] reductase	Putative uncharacterized protein	Putative 3-oxoacyl-[acyl-carrier-protein] reductase	Oxidoreductase, short chain dehydrogenase/reductase family	Putative 3-oxoacyl-[acyl-carrier-protein] reductase	Putative oxidoreductase	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative uncharacterized protein	Predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	YohF protein	


ECOLI02072	tRNA-dihydrouridine synthase C	tRNA-dihydrouridine synthase C	tRNA-dihydrouridine synthase C	tRNA-dihydrouridine synthase C	Putative regulator protein	tRNA-dihydrouridine synthase C	Putative uncharacterized protein	Putative nifR3 family TIM-barrel enzyme	putative regulator protein	tRNA-dihydrouridine synthase C	tRNA-dihydrouridine synthase C	tRNA-dihydrouridine synthase C	Putative dihydrouridine synthase	tRNA-dihydrouridine synthase C	tRNA-dihydrouridine synthase C	CDS_ID OB0783 hypothetical protein	Predicted TIM-barrel enzyme, nifR3 family	tRNA-dihydrouridine synthase C	Residues 23 to 337 of 337 are 99 pct identical to residues 1 to 315 of a 315 aa protein from Escherichia coli K12 ref: NP_416645.1 putative regulator protein	tRNA-dihydrouridine synthase C	Similar to putative regulator protein YohI of Escherichia coli	identified by similarity to OMNI:NTL01SA0092; match to protein family HMM PF01207 conserved hypothetical protein	Putative uncharacterized protein	Probable tRNA-dihydrouridine synthase	IPR001269: Protein of unknown function UPF0034; IPR003009: FMN/related compound-binding core putative nitrogen regulation protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	
ECOLI02073	UPF0299 membrane protein yohJ	Putative uncharacterized protein	Putative uncharacterized protein	UPF0299 membrane protein HI1297	Putative uncharacterized protein PH1801	Putative uncharacterized protein	Putative effector of murein hydrolase LrgA	Putative uncharacterized protein PF1844	Putative uncharacterized protein CPE1980	Putative uncharacterized protein	UPF0299 membrane protein PM0880	Putative uncharacterized protein	UPF0299 membrane protein VV1471	UPF0299 membrane protein yohJ	Putative membrane protein	Putative effector of murein hydrolase LrgA	Putative uncharacterized protein	UPF0299 membrane protein yohJ	UPF0299 membrane protein VC_1233	Conserved protein, putative murein hydrolase exporter	Putative membrane protein	UPF0299 membrane protein VP1300	UPF0299 membrane protein yohJ	Predicted membrane protein YohJ family	BH3269 protein	Residues 13 to 144 of 144 are 100 pct identical to residues 1 to 132 of a 132 aa protein from Escherichia coli K12 ref: NP_416646.1 orf, conserved hypothetical protein	putative effector of murein hydrolase	Putative effector of murein hydrolase transmembrane protein	conserved hypothetical protein	
ECOLI02074	Inner membrane protein yohK	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein HI1298	Putative uncharacterized protein PH1802	Putative membrane protein	Putative effector of murein hydrolase	Murein hydrolase	Putative uncharacterized protein CPE1981	LrgB family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative effector of murein hydrolase LrgB	Putative uncharacterized protein	Puatative membrane protein	Putative membrane protein	Putative yohK (seritonin transporter)	Putative murein hydrolase	Hypothetical protein yohK	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Murein hydrolase export regulator	Membrane protein, putative	Putative uncharacterized protein	Putative uncharacterized protein VP1299	Putative seritonin transporter	CDS_ID OB3131 hypothetical protein	
ECOLI02075	Cytidine deaminase	Cytidine deaminase	Cytidine deaminase	Cytidine deaminase	Cytidine deaminase	putative cytidine deaminase	Cytidine deaminase	Cytidine deaminase	Cytidine deaminase	Cytidine deaminase	Cytidine deaminase	Cytidine deaminase	Cytidine deaminase	Residues 1 to 294 of 294 are 100 pct identical to residues 1 to 294 of a 294 aa protein from Escherichia coli K12 ref: NP_416648.1 cytidine-deoxycytidine deaminase	Cytidine deaminase	Cytidine deaminase	IPR002125: Cytidine/deoxycytidylate deaminase, zinc-binding region cytidine/deoxycytidine deaminase	similar to Salmonella typhi CT18 cytidine deaminase cytidine deaminase	Cytidine deaminase	cytidine deaminase	cytidine aminohydrolase; CDA; Similar to: HI1350, CDD_HAEIN cytidine deaminase	Cytidine deaminase Cdd protein	Cytidine deaminase	cytidine deaminase	Code: F; COG: COG0295 cytidine/deoxycytidine deaminase	Evidence 2b : Function of strongly homologous gene; PubMedId : 1567863, 10217788; Product type e : enzyme putative cytidine/deoxycytidine deaminase	Code: F; COG: COG0295 cytidine/deoxycytidine deaminase	cytidine deaminase	Code: F; COG: COG0295 cytidine/deoxycytidine deaminase	
ECOLI02076	Protein sanA	SanA protein	Vancomycin resistance protein	Putative SanA protein	Protein sanA	SanA protein	Putative vancomycin resistance protein	SanA protein	Protein sanA	Residues 1 to 213 of 213 are 100 pct identical to residues 27 to 239 of a 239 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288727.1 vancomycin sensitivity	Putative exported protein	SanA protein	vancomycin sensitivity	similar to Salmonella typhi CT18 vancomycin resistance protein vancomycin resistance protein	Putative exported protein	SanA protein	Uncharacterized membrane protein SanA protein	Vancomycin sensitivity protein	SanA protein	Code: S; COG: COG2949 vancomycin sensitivity	Code: S; COG: COG2949 vancomycin sensitivity	vancomycin resistance protein	Code: S; COG: COG2949 vancomycin sensitivity	Vancomycin resistance SanA protein	Hypothetical protein precursor	SanA protein	SanA protein	Hypothetical protein precursor	Putative exported protein precursor	
ECOLI02077	Uncharacterized protein yeiS	Hypothetical protein yeiS	Uncharacterized protein yeiS	Residues 1 to 79 of 79 are 100 pct identical to residues 1 to 79 of a 79 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288728.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative membrane protein	Putative inner membrane protein	Putative uncharacterized protein	
ECOLI02078	Uncharacterized oxidoreductase yeiT	Glutamate synthase small subunit	Probable oxidoreductase	Glutamate synthase, beta subunit	Uncharacterized oxidoreductase yeiT	hypothetical NADPH-dependent glutamate synthase	Hypothetical oxidoreductase yeiT	similar to GB:V00336, SP:P30863, PID:1552777, and PID:1786400; identified by sequence similarity; putative pyridine nucleotide-disulphide oxidoreductase family protein	Putative NADPH-dependent glutamate synthase beta chain	GLUTAMATE SYNTHASE (NADPH) SMALL CHAIN	Uncharacterized oxidoreductase yeiT	Residues 1 to 412 of 412 are 98 pct identical to residues 1 to 412 of a 412 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288729.1 putative oxidoreductase	identified by match to protein family HMM PF00070 pyridine nucleotide-disulphide oxidoreductase family protein	NADPH-dependent glutamate synthase small chain protein	IPR000103: Pyridine nucleotide-disulphide oxidoreductase, class-II; IPR000205: NAD-binding site; IPR000345: Cytochrome c heme-binding site;IPR000759: Adrenodoxin reductase;IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I;IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase putative NADPH-dependent glutamate synthase beta chain or related oxidoreductase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	similar to BR0283, pyridine nucleotide-disulphide oxidoreductase family protein pyridine nucleotide-disulphide oxidoreductase family protein	hypothetical protein	Glutamate synthase, small subunit, putative	Uncharacterized oxidoreductase yeiT	identified by match to protein family HMM PF00070; match to protein family HMM PF07992 pyridine nucleotide-disulphide oxidoreductase family protein	Pyridine nucleotide-disulphide oxidoreductase, class-II:NAD binding site:Adrenodoxin reductase:Pyridine nucleotide-disulphide...	NAD binding site:Cytochrome c heme-binding site:FAD-dependent pyridine nucleotide-disulphide oxidoreductase:Haem peroxidase Citation: Lu T, Wu YQ, Song HY. Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai).  1997:294-302. NADPH-dependent glutamate synthase beta chain and related oxidoreductase	Code: ER; COG: COG0493 putative oxidoreductase	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	4Fe-4S ferredoxin, iron-sulfur binding	Code: ER; COG: COG0493 putative oxidoreductase	putative glutamate synthase small subunit protein similarity:fasta; with=UniProt:Q846U7_9BACL (EMBL:AY236960); Brevibacillus agri.; gltB; Glutamate synthase small subunit protein.; length=448; id 42.177; 441 aa overlap; query 15-442; subject 4-441 similarity:fasta; with=UniProt:Q92N00_RHIME (EMBL:SME591790); Rhizobium meliloti (Sinorhizobium meliloti).; PROBABLE GLUTAMATE SYNTHASE SMALL CHAIN PROTEIN (EC 1.4.1.13).; length=453; id 79.029; 453 aa overlap; query 1-453; subject 1-453	FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase: (0.0022) KEGG: sil:SPO1776 pyridine nucleotide-disulphide oxidoreductase family protein, ev=0.0, 78% identity	
ECOLI02079	Uncharacterized protein yeiA	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	Dihydroorotate dehydrogenase	hypothetical dihydroorotate dehydrogenase	Probable oxidoreductase	Hypothetical protein yeiA	similar to GP:15075471; identified by sequence similarity; putative dihydroorotate dehydrogenase family protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE OXIDOREDUCTASE IRON-SULFUR PROTEIN	Oxidoreductase iron-sulfur protein	dihydropyrimidine dehydrogenase	DIHYDROPYRIMIDINE DEHYDROGENASE	Putative oxidoreductase	probable oxidoreductase	dihydroorotate dehydrogenase	identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037 dihydroorotate dehydrogenase family protein	Dihydroorotate oxidase protein	dihydropyrimidine dehydrogenase	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain; IPR003009: FMN/related compound-binding core putative dihydropyrimidine dehydrogenase	similar to Salmonella typhimurium putative dihydropyrimidine dehydrogenase putative dihydropyrimidine dehydrogenase	similar to BR0282, dihydroorotate dehydrogenase family protein dihydroorotate dehydrogenase family protein	Dihydroorotate dehydrogenase family protein	Putative dihydropyrimidine dehydrogenase	Dihydroorotate dehydrogenase fused to Fe-S- cluster domain	Dihydroorotate dehydrogenase	identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037 dihydroorotate dehydrogenase family protein	Code: F; COG: COG0167 putative oxidoreductase	
ECOLI02080	Galactoside transport system permease protein mglC	Galactoside transport system permease protein mglC	Probable galactoside ABC transporter	MglC	Galactoside ABC transporter, permease protein	Galactoside transport system permease protein MglC	putative galactoside ABC transporter, permease protein	Galactoside transport system permease protein mglC	Galactoside ABC transporter, permease protein	Galactoside transport system permease protein mglC	Methyl-galactoside transport and galactose taxis	ABC-type glucose/galactose transport system, permease component	Residues 1 to 336 of 336 are 99 pct identical to residues 1 to 336 of a 336 aa protein from Escherichia coli K12 ref: NP_416653.1 methyl-galactoside transport and galactose taxis	Galactoside permease	IPR001851: Bacterial inner-membrane translocator ABC superfamily (membrane), methyl-galactoside transport protein	similar to Salmonella typhi CT18 galactoside transport system permease protein MglC galactoside transport system permease protein MglC	ABC galactoside transporter, permease subunit mglC	Similar to: HI0824, MGLC_HAEIN galactoside transport system permease protein MglC	Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components AraH protein	Galactoside transport system permease protein mglC	Code: G; COG: COG4211 methyl-galactoside transport and galactose taxis	Code: G; COG: COG4211 methyl-galactoside transport and galactose taxis	galactoside ABC transporter permease component	Code: G; COG: COG4211 methyl-galactoside transport and galactose taxis	Galactoside transport system permease protein MglC	Galactoside permease	MglC identified by match to protein family HMM PF02653	galactoside ABC transporter, permease protein identified by similarity to SP:Q56036; match to protein family HMM PF02653	Galactoside transport system permease protein mglC	
ECOLI02081	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	putative galactoside ABC transporter, ATP-binding protein	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Residues 1 to 506 of 506 are 100 pct identical to residues 1 to 506 of a 506 aa protein from Escherichia coli K12 ref: NP_416654.1 ATP-binding component of methyl-galactoside transport and galactose taxis	Galactose/methyl galactoside import ATP-binding protein mglA	Galactose/methyl galactoside import ATP-binding protein mglA	Similar to: HI0823, MGLA_HAEIN galactoside transport ATP-binding protein MglA	ABC-type sugar (aldose) transport system, ATPase component MglA protein	Galactose/methyl galactoside import ATP-binding protein mglA	Code: G; COG: COG1129 ATP-binding component of methyl-galactoside transport and galactose taxis	Code: G; COG: COG1129 ATP-binding component of methyl-galactoside transport and galactose taxis	galactoside ABC transporter ATP-binding component	Galactose/methyl galactoside import ATP-binding protein mglA	Galactoside transport ATP-binding protein	Galactoside transport ATP-binding protein mglA identified by match to protein family HMM PF00005	galactoside ABC transporter, ATP-binding protein identified by similarity to SP:P23199; match to protein family HMM PF00005	Galactose/methyl galactoside import ATP-binding protein mglA	Galactoside transport ATP-binding protein	galactoside ABC transporter, ATP-binding protein identified by similarity to SP:P0AAG9; match to protein family HMM PF00005	
ECOLI02082	D-galactose-binding periplasmic protein	D-galactose-binding periplasmic protein	Probable galactoside ABC transporter	MglB	ABC-type sugar transport system, periplasmic component	D-galactose-binding periplasmic protein	putative galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein	D-galactose-binding periplasmic protein precursor	Galactoside ABC transporter, periplasmic D- galactose/D-glucose-binding protein	Methylgalactoside ABC transporter, periplasmic galactose-binding protein	D-galactose-binding periplasmic protein	Galactose-binding transport protein; receptor for galactose taxis	ABC-type sugar transport system, periplasmic component	Residues 1 to 332 of 332 are 100 pct identical to residues 1 to 332 of a 332 aa protein from Escherichia coli K12 ref: NP_416655.1 galactose-binding transport protein; receptor for galactose taxis	Galactose-binding protein	ABC superfamily (peri_perm), galactose transport protein	similar to Salmonella typhi CT18 D-galactose-binding periplasmic protein precursor D-galactose-binding periplasmic protein precursor	ABC transporter, perplasmic galactose-binding protein	GBP; D-galactose/ D-glucose binding protein; GGBP; Similar to: HI0822, DGAL_HAEIN D-galactose-binding periplasmic protein precursor	Periplasmic sugar-binding proteins RbsB protein	D-galactose-binding periplasmic protein	receptor for galactose taxis; Code: G; COG: COG1879 galactose-binding transport protein	receptor for galactose taxis; Code: G; COG: COG1879 galactose-binding transport protein	galactoside ABC transporter periplasmic component	receptor for galactose taxis; Code: G; COG: COG1879 galactose-binding transport protein	D-galactose-binding periplasmic protein	Galactose-binding protein precursor	d-galactose-binding periplasmic protein precursor identified by match to protein family HMM PF00532	putative galactoside ABC transporter, galactoside-binding protein identified by similarity to SP:P23905; match to protein family HMM PF00532	
ECOLI02083	HTH-type transcriptional regulator galS	Mgl repressor and galactose ultrainduction factor	Mgl repressor, galactose operon inducer	Residues 3 to 348 of 348 are 99 pct identical to residues 1 to 346 of a 346 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288734.1 mgl repressor, galactose operon inducer	IPR000843: Bacterial regulatory protein LacI, HTH motif; IPR001254: Peptidase S1, chymotrypsin family transcriptional repressor of mgl operon (GalR/LacI family)	similar to Salmonella typhi CT18 mgl repressor and galactose ultrainduction factor mgl repressor and galactose ultrainduction factor	HTH-type transcriptional regulator galS	galactose operon inducer; Code: K; COG: COG1609 mgl repressor	galactose operon inducer; Code: K; COG: COG1609 mgl repressor	mgl repressor and galactose operon inducer	galactose operon inducer; Code: K; COG: COG1609 mgl repressor	Mgl repressor and galactose ultrainduction factor	GalS transcriptional repressor	Mgl repressor and galactose ultrainduction factor	mgl repressor, galactose operon inducer Code: K; COG: COG1609	Mgl repressor and galactose ultrainduction factor	Transcriptional regulator, LacI family	Mgl repressor, galactose operon inducer	Putative uncharacterized protein	Transcriptional regulator GalS	Transcriptional regulator, LacI family	DNA-binding transcriptional repressor	Transcriptional regulator GalS	Transcriptional regulator, LacI family	Transcriptional regulator GalS	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Mgl repressor, galactose operon inducer	
ECOLI02084	Uncharacterized protein yeiB	Putative membrane protein	Hypothetical Membrane Spanning Protein	Hypothetical protein yeiB	Putative uncharacterized protein	CDS_ID OB1183 hypothetical protein	similar to Z99124-102|CAB16034.1| percent identity: 23 in 405 aa conserved hypothetical protein	Residues 1 to 358 of 358 are 92 pct identical to residues 1 to 385 of a 385 aa protein from Escherichia coli K12 ref: NP_416657.1 orf, conserved hypothetical protein	Putative exported protein	Similar to putative exported protein YeiB of Escherichia coli	conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative exported protein	Putative inner membrane protein	identified by match to protein family HMM PF04171; match to protein family HMM PF04235 membrane protein, putative	conserved hypothetical protein	Code: S; COG: COG2311 conserved hypothetical protein	similar to gi|53795307|ref|ZP_00356394.1| [Chloroflexus aurantiacus], percent identity 29 in 388 aa, BLASTP E(): 1e-39 hypothetical protein	Code: S; COG: COG2311 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG2311; orf conserved hypothetical protein	Putative membrane protein	Hypothetical protein	Hypothetical protein precursor	Putative membrane protein	Putative uncharacterized protein	protein of unknown function DUF418 PFAM: protein of unknown function DUF405; protein of unknown function DUF418 KEGG: bsu:BG11110 similar to unknown proteins	Hypothetical protein precursor	
ECOLI02085	GTP cyclohydrolase 1	GTP cyclohydrolase I;	GTP-cyclohydrolase I, catalyzes the first step in the folic acid biosynthetic pathway.  [Source:SGD;Acc:S000003499]	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	DEHA2G20306p;similar to uniprot|P51601 Saccharomyces cerevisiae YGR267C FOL2 GTP-cyclohydrolase;	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	hypothetical GTP cyclohydrolase	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase I	GTP cyclohydrolase I	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	GTP cyclohydrolase 1	
ECOLI02086	S-formylglutathione hydrolase yeiG	Probable esterase	Putative esterase	Hypothetical protein yeiG	Putative esterase	Product confidence : putative Gene name confidence : hypothetical putative S-formylglutathione hydrolase protein	Esterase, putative	Putative esterase	S-formylglutathione hydrolase yeiG	similar to Escherichia coli K12 putative esterase (EC 3.1.1.-). gi: 1788477 (279 aa). BLAST with identity of 98% in 280 aa. This CDS ontains frameshift. The sequence has been checked and is believed to be correct. pseudo	Putative esterase	putative esterase	identified by similarity to GB:AAC44554.1; match to protein family HMM PF00756 S-formylglutathione hydrolase, putative	Probable esterase	similar to Salmonella typhi CT18 putative esterase putative esterase	Putative esterase	S-formylglutathione hydrolase	Esterase, putative	Putative esterase	putative esterase/lipase/thioesterase	identified by match to protein family HMM PF00756 putative esterase	identified by match to protein family HMM PF00756 esterase, putative	identified by match to protein family HMM PF00756 esterase, putative	Carboxylesterase	Code: R; COG: COG0627 putative esterase	Carboxylesterase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative esterase	Citation: Harms,N.et al., J. Bacteriol. 178 (21), 6296-6299 (1996) S-formylglutathione hydrolase	Code: R; COG: COG0627 putative esterase	
ECOLI02087	Colicin I receptor	Ferric enterobactin receptor	Colicin I receptor	Putative TonB-dependent outer membrane receptor protein	Colicin I receptor	TonB-dependent siderophore receptor protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE IRON/HEME TRANSPORT PROTEIN	TonB-dependent receptor HmuR	hypothetical protein	Outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product	similar to Escherichia coli K12 outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product gi: 1788478 (664 aa). BLAST with identity of 99% in 663 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Ferric enterobactin receptor	IPR000531: TonB-dependent receptor protein outer membrane porin, receptor for colicin I, requires TonB	similar to Salmonella typhi CT18 colicin I receptor precursor colicin I receptor precursor	Similar to Porphyromonas gingivalis hypothetical TonB-linked outer membrane receptor PG35 SWALL:Q9KIB2 (EMBL:AF237556) (833 aa) fasta scores: E(): 5.1e-14, 23.77% id in 778 aa, and to Leptospira interrogans hemin receptor LA3149 SWALL:Q8F1I6 (EMBL:AE011477) (777 aa) fasta scores: E(): 9.5e-11, 21.1% id in 796 aa putative TonB-related exported protein	Outer membrane porin	identified by match to protein family HMM PF00593; match to protein family HMM PF07715 TonB-dependent receptor	identified by match to protein family HMM PF00593; match to protein family HMM PF07715 iron-regulated outer membrane virulence protein	TonB-dependent receptor	porin; requires tonB gene product; Code: P; COG: COG4771 outer membrane receptor for iron-regulated colicin I receptor	TonB-dependent receptor	Probable TonB-dependent receptor	Colicin I receptor	TonB-dependent receptor, plug precursor	TonB-dependent receptor, plug precursor	Colicin I receptor	TonB-dependent outer membrane receptor	TonB-dependent receptor, plug	TonB-dependent receptor, plug PFAM: TonB-dependent receptor; TonB-dependent receptor, plug KEGG: csa:Csal_2678 TonB-dependent siderophore receptor	
ECOLI02088	Lysine-specific permease	Probable amino-acid permease PB1C11.02 [Source:GeneDB_Spombe;Acc:SPCPB1C11.02]	similar to uniprot|P32487 Saccharomyces cerevisiae YNL268w LYP1 or uniprot|P04817 Saccharomyces cerevisiae YEL063c CAN1;	DEHA2G14608p;similar to uniprot|P32487 Saccharomyces cerevisiae YNL268W LYP1 Lysine permease;	Lysine specific permease	Lysine-specific permease	Lysine-specific permease	Lysine-specific permease	Lmo0798 protein	Lysine-specific permease	Lysine specific permease	Lysine-specific permease	Lysine-specific permease	identified by match to protein family HMM PF00324 lysine-specific permease	Lysine-specific permease	Lysine-specific permease	Lysine-specific permease	Lysine-specific permease	Lysine-specific permease	Lysine-specific permease	Lin0791 protein	Residues 1 to 489 of 489 are 99 pct identical to residues 1 to 489 of a 489 aa protein from Escherichia coli K12 ref: NP_416661.1 lysine-specific permease	Putative lysine-specific permease	Putative amino-acid permease	Probable lysine-specific permease transmembrane protein	Lysine-specific permease	Lysine transport protein	identified by match to protein family HMM PF00324 amino acid permease family protein	Lysine-specific permease	

ECOLI02089	Uncharacterized HTH-type transcriptional regulator yeiE	Transcriptional regulator	Putative LysR-family transcriptional regulator	Transcriptional regulator	Transcriptional regulator, LysR family	Probable transcriptional regulator	Putative transcriptional regulator	Transcriptional regulator, LysR family	Putative transcriptional regulator	Lmo2146 protein	Putative HTH-type transcriptional regulator yeiE	LysR-family transciptional regulator	Transcriptional regulator, LysR family	Uncharacterized HTH-type transcriptional regulator yeiE	CDS_ID OB3407; LysR family transcriptional regulator	Lin2250 protein	Residues 1 to 260 of 260 are 99 pct identical to residues 34 to 293 of a 293 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288740.1 putative transcriptional regulator LYSR-type	Putative LysR-family transcriptional regulatory protein	Probable transcriptional regulatory dna-binding transcription regulator protein	Similar to putative transcriptional regulator LysR-type YeiE of Escherichia coli	Probable transcriptional regulator, LysR family	identified by similarity to GP:29898768; match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark unknown protein	LysR family transcriptional regulator	IPR000792: Bacterial regulatory protein, LuxR family; IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Putative LysR-family transcriptional regulatory protein	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	Similar to Q87XZ5 Transcriptional regulator, LysR family, from Pseudomonas syringae (308 aa). FASTA: opt: 591 Z-score: 726.5 E(): 1.4e-32 Smith-Waterman score: 591; 34.948 identity in 289 aa overlap. ORF ftt0864c transcriptional regulator, LysR family	
ECOLI02090	UPF0324 inner membrane protein yeiH	UPF0324 membrane protein AF_1621	UPF0324 membrane protein HI1643	UPF0324 membrane protein BL1094	UPF0324 membrane protein CPE0129	UPF0324 membrane protein NMB1979	UPF0324 membrane protein PM1461	UPF0324 membrane protein PA5383	UPF0324 membrane protein Cj0999c	UPF0324 inner membrane protein yeiH	UPF0324 membrane protein BA_5405/GBAA_5405/BAS5024	UPF0324 membrane protein lmo2147	UPF0324 membrane protein Cgl0015/cg0018	Putative uncharacterized protein	UPF0324 membrane protein BC_5174	Putative uncharacterized protein	Putative membrane protein	UPF0324 inner membrane protein yeiH	identified by match to protein family HMM PF03601 membrane protein, putative	UPF0324 membrane protein BP2808	UPF0324 membrane protein BB4178	Putative membrane protein	PMID: 11549181 best DB hits: BLAST: gb:AAF82075.1; AF232751_3 (AF232751) unknown protein; E=1e-22 gb:AAB89642.1; (AE000991) conserved hypothetical protein; E=1e-10 gb:AAB89643.1; (AE000991) A. fulgidus predicted coding region; E=8e-05 COG: yeiH; COG2855 Uncharacterized membrane protein; E=2e-04 PFAM: PF00065; Neurotransmitter-gated ion-channel; E=0.36 conserved hypothetical protein	UPF0324 membrane protein BPP3732	UPF0324 membrane protein WS2204	hypothetical conserved protein	Membrane protein, putative	UPF0324 inner membrane protein yeiH	CDS_ID OB3406 hypothetical protein	
ECOLI02091	Endonuclease 4	DNA-(apurinic or apyrimidinic site) lyase 1;	Major apurinic/apyrimidinic endonuclease, 3'-repair diesterase involved in repair of DNA damage by oxidation and alkylating agents; also functions as a 3'-5' exonuclease to repair 7,8-dihydro-8-oxodeoxyguanosine.  [Source:SGD;Acc:S000001597]	similar to sp|P22936 Saccharomyces cerevisiae YKL114c APN1 AP endonuclease, hypothetical start	DNA-(apurinic or apyrimidinic site) lyase 1 [Source:GeneDB_Spombe;Acc:SPCC622.17]	similar to sp|P22936 Saccharomyces cerevisiae YKL114c APN1 AP endonuclease singleton, start by similarity	Probable endonuclease 4	DNA LYASE/ENDONUCLEASE 4;11_1550i, DNA LYASE/ENDONUCLEASE 4, APN1_CAEEL, END4_BUCAI, gene found by Glimmer, modified ATG by annotation;	Probable endonuclease 4	Probable endonuclease 4	highly similar to uniprot|P22936 Saccharomyces cerevisiae YKL114c APN1 AP endonuclease;	Probable endonuclease IV	DEHA2F13838p;similar to uniprot|P22936 Saccharomyces cerevisiae YKL114C APN1 Major apurinic/apyrimidinic endonuclease;	Probable endonuclease 4	similar to GB:J04965,  and GB:S42643; identified by sequence similarity; putative endonuclease IV	Probable endonuclease 4	Probable endonuclease 4	Probable endonuclease 4	Probable endonuclease 4	Probable endonuclease 4	Probable endonuclease 4	Endonuclease IV	Probable endonuclease 4	Probable endonuclease 4	Probable endonuclease 4	Probable endonuclease 4	Probable endonuclease 4	Probable endonuclease 4	Probable endonuclease 4	
ECOLI02092	Uncharacterized sugar kinase yeiI	Hypothetical sugar kinase yeiI	Putative kinase	Sugar kinases, ribokinase family	Residues 1 to 362 of 362 are 98 pct identical to residues 1 to 362 of a 362 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288743.1 putative kinase	identified by match to protein family HMM PF00294 kinase, pfkB family	Code: G; COG: COG0524 putative kinase	Code: G; COG: COG0524 putative kinase	Code: G; COG: COG0524 putative kinase	Hypothetical sugar kinase YeiI	Hypothetical protein	Hypothetical sugar kinase YeiI	Complete genome	putative kinase Code: G; COG: COG0524	putative sugar kinase YeiI	PfkB domain protein	Predicted kinase	Kinase, pfkB family	PfkB domain protein	Kinase, pfkB family	Putative uncharacterized protein	Sugar kinase, ribokinase family	Sugar kinase, ribokinase family	Kinase, pfkB family	Kinase, pfkB family	Putative kinase	Putative kinase	Carbohydrate kinase, PfkB family	Putative kinase	
ECOLI02093	Nucleoside permease nupX	Putative transport system permease protein	Residues 1 to 416 of 416 are 99 pct identical to residues 1 to 416 of a 416 aa protein from Escherichia coli K12 ref: NP_416666.1 putative transport system permease protein	Molecular Function: nucleoside:sodium symporter activity (GO:0005415), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) putative nucleoside uptake transporter YutK	Code: F; COG: COG1972 putative transport system permease protein	Code: F; COG: COG1972 putative transport system permease protein	Code: F; COG: COG1972 putative transport system permease protein	transcript_id=ENSETET00000014246	Putative Na+ dependent nucleoside transporter- family protein	pyrimidine nucleoside transport protein	Na+ dependent nucleoside transporter	nucleoside permease COG1972 Nucleoside permease	putative transport system permease protein Code: F; COG: COG1972	Lodderomyces elongisporus (LELG_00989.1) hypothetical protein similar to H+/nucleoside cotransporter (translation)	Nucleoside transporter, NupC family	Predicted nucleoside transporter	Nucleoside transporter, NupC family	Nucleoside transporter, NupC family	Nucleoside transporter, NupC family	Nucleoside transporter, NupC family	Putative transport protein	Putative sodium/proton nucleoside transporter	Putative sodium/proton nucleoside transporter	Putative sodium/proton nucleoside transporter	Predicted nucleoside transporter	Putative sodium/proton nucleoside transporter	YeiJ protein	Putative transport system permease protein	Predicted nucleoside transporter	
ECOLI02094	Pyrimidine-specific ribonucleoside hydrolase rihB	Inosine-uridine preferring nucleoside hydrolase	IunH	Inosine-uridine preferring nucleoside hydrolase	Inosine-uridine nucleoside N-ribohydrolase	Pyrimidine-specific ribonucleoside hydrolase rihB	Inosine-uridine preferring nucleoside hydrolase	Pyrimidine-specific ribonucleoside hydrolase rihB	similar to AX064775-1|CAC25627.1| percent identity: 90 in 312 aa putative nucleoside hydrolase	inosine-uridine preferring nucleoside hydrolase	Residues 1 to 313 of 313 are 98 pct identical to residues 1 to 313 of a 313 aa protein from Escherichia coli K12 ref: NP_416667.1 orf, conserved hypothetical protein	Inosine-uridine preferring nucleoside hydrolase	, predicted protein, len = 315 aa, nonspecific nucleoside hydrolase; predicted pI = 6.1767; very high similarity to Q8WQX2, nonspecific nucleoside hydrolase in Leishmania donovani; contains a inosine-uridine preferring nucleoside hydrolase domain nonspecific nucleoside hydrolase	inosine-uridine preferring nucleoside hydrolase	Inosine-uridine nucleoside N-ribohydrolase	Code: F; COG: COG1957 conserved hypothetical protein	Inosine-uridine preferring nucleoside hydrolase	Code: F; COG: COG1957 conserved hypothetical protein	Code: F; COG: COG1957; orf conserved hypothetical protein	Pyrimidine-specific ribonucleoside hydrolase rihB	Inosine/uridine-preferring nucleoside hydrolase PFAM: Inosine/uridine-preferring nucleoside hydrolase KEGG: sso:SSO2243 purine nucleosidase, putative (IunH-2)	Pyrimidine-specific ribonucleoside hydrolase rihB	Inosine-uridine nucleoside N-ribohydrolase	possible inosine-uridine preferring nucleoside hydrolase COG family: inosine-uridine nucleosideN-ribohydrolase Orthologue of BL0102 PFAM_ID: IU_nuc_hydro	Purine nucleosidase PFAM: Inosine/uridine-preferring nucleoside hydrolase KEGG: pmu:PM1767 inosine-uridine preferring nucleoside hydrolase	nonspecific nucleoside hydrolase	Hypothetical protein	conserved hypothetical protein Code: F; COG: COG1957	Putative nucleoside hydrolase	
ECOLI02095	Regulatory protein nsr	Cyclic nucleotide-binding domain protein	Catabolite gene activator	Cyclic nucleotide-binding domain protein	Regulatory protein nsr	identified by match to protein family HMM PF00027 cyclic nucleotide-binding domain protein	Catabolite gene activator	Putative transcriptional regulator	Regulatory protein nsr	Residues 14 to 203 of 205 are 98 pct identical to residues 1 to 190 of a 219 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288746.1 putative transcriptional regulator	transcriptional regulator, putative	Putative uncharacterized protein gbs1882	identified by match to PFAM protein family HMM PF00027 cyclic nucleotide-binding domain protein	transcriptional regulator, putative	cyclic nucleotide-binding domain protein	identified by match to protein family HMM PF00027 cyclic nucleotide-binding domain protein	Code: T; COG: COG0664 putative transcriptional regulator	Code: T; COG: COG0664 putative transcriptional regulator	Putative uncharacterized protein	Regulatory protein YeiL	Crp-like transcriptional regulator	Crp-like transcriptional regulator	Cyclic nucleotide-binding domain protein	putative transcriptional regulator Code: T; COG: COG0664	ribonucleoside hydrolase 2	cyclic nucleotide-binding domain protein	Putative uncharacterized protein	Regulatory protein Nsr	Putative Catabolite gene activator	
ECOLI02096	Inner membrane transport protein yeiM	Hypothetical transport protein yeiM	Putative transport system permease protein	Residues 1 to 416 of 416 are 99 pct identical to residues 1 to 416 of a 416 aa protein from Escherichia coli K12 ref: NP_416669.1 putative transport system permease protein	putative nucleoside transporter	Code: F; COG: COG1972 putative transport system permease protein	Na+ dependent nucleoside transporter-like protein	Putative Na+ dependent nucleoside transporter- family protein	nucleoside transporter identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Hypothetical transport protein YeiM	Transport system permease	putative transport system permease protein Code: F; COG: COG1972	putative nucleoside transporter	Nucleoside transporter, NupC family	Nucleoside transporter precursor	Predicted nucleoside transporter	Nucleoside transporter precursor	Nucleoside transporter, NupC family	Nucleoside transporter precursor	Putative uncharacterized protein	Nucleoside permease NupC	Pyrimidine nucleoside transport protein	Nucleoside transporter, NupC family	Nucleoside transporter	Nucleoside transporter, NupC family	Putative transport protein	Putative sodium/proton nucleoside transporter	Putative sodium/proton nucleoside transporter	Putative sodium/proton nucleoside transporter	
ECOLI02097	UPF0724 protein yeiN	DEHA2F00880p;similar to CA3205|IPF3448 Candida albicans IPF3448 Unknown function;	Putative pigment biosynthetic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Lmo2340 protein	Pseudouridine-5'-phosphate glycosidase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	hypothetical conserved protein	Putative uncharacterized protein yeiN	hypothetical protein	SC3C9.06, conserved hypothetical protein, len: 301 aa; similar to TR:BAB36480 (EMBL:AP002560) Escherichia coli O157:H7 hypothetical 32.9 kDa protein ECS3057, 312 aa; fasta scores: opt: 837 Z-score: 923.0 bits: 178.9 E(): 8.4e-44; 48.495% identity in 299 aa overlap conserved hypothetical protein	Pseudouridine-5'-phosphate glycosidase	Lin2434 protein	Residues 1 to 312 of 312 are 97 pct identical to residues 1 to 312 of a 312 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288748.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Pseudouridine-5'-phosphate glycosidase 2	Similar to conserved hypothetical protein hypothetical protein	conserved gene indigoidine synthase A-like protein, uncharacterized enzyme involved in pigment biosynthesis	Similar to conserved hypothetical protein hypothetical protein	identified by match to protein family HMM PF04227 indigoidine synthase A family protein	Putative uncharacterized protein	Indigoidine synthase A like protein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0309 putative membrane protein	conserved hypothetical protein	identified by match to protein family HMM PF04227 indigoidine synthase A-like protein	
ECOLI02098	Uncharacterized sugar kinase yeiC	Hypothetical sugar kinase yeiC	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology PUTATIVE CARBOHYDRATE KINASE PROTEIN	Putative kinase	carbohydrate kinase	Residues 1 to 313 of 313 are 98 pct identical to residues 1 to 313 of a 313 aa protein from Escherichia coli K12 ref: NP_416671.1 putative kinase	Similar to putative kinase YeiC protein of Escherichia coli	Carbohydrate kinase protein	Code: G; COG: COG0524 putative kinase	PfkB PFAM: PfkB: (3.5e-09) KEGG: sil:SPO2060 kinase, PfkB family, ev=1e-125, 77% identity	probable carbohydrate kinase protein similar to SMc00473 [Sinorhizobium meliloti] and AGR_C_3442p [Agrobacterium tumefaciens] Similar to swissprot:Q92PG1 Putative location:bacterial cytoplasm Psort-Score: 0.0827; go_function: transferase activity [goid 0016740]	Hypothetical sugar kinase YeiC	probable kinase yeiC, putative identified by match to protein family HMM PF00294	kinase, pfkB family identified by match to protein family HMM PF00294	Hypothetical sugar kinase YeiC	PfkB domain protein PFAM: PfkB domain protein KEGG: sil:SPO2060 kinase, PfkB family	kinase, pfkB family identified by match to protein family HMM PF00294	putative kinase Code: G; COG: COG0524	PfkB PFAM: PfkB KEGG: mlo:mll0029 carbohydrate kinase	putative sugar kinase	Putative sugar kinase	Kinase, pfkB family protein	Kinase, PfkB family	PfkB domain protein	Predicted kinase	Kinase, PfkB family	Kinase, pfkB family protein	PfkB domain protein	Kinase, pfkB family protein	
ECOLI02099	PTS system fructose-specific EIIBC component	PTS system fructose-specific EIIABC component	PTS system fructose-specific EIIBC component	Putative fructose-specific permease	PTS system	Phosphotransferase system transporter fructose- specific IIBC component, FruA	Phosphotransferase system, fructose-specific IIC component	PTS system, fructose-specific IIBC component	PTS system, fructose-specific IIBC component	Lmo0358 protein	Phosphotransferase system, fructose-specific IIC component	PTS system, fructose-specific IIABC component	PTS system, fructose-specific IIBC component	PTS system, fructose-specific IIBC component	Pts system, fructose-specific IIbc component	PTS system fructose-specific IIBC component	Phosphotransferase system, fructose-specific IIBC component	PTS system, fructose-specific enzyme II, BC component	Putative PTS fructose-specific enzyme IIABC	Phosphotransferase system	PTS system fructose-specific enzyme IIABC component	PTS system, fructose-specific IIBC component	pseudo	PTS system, fructose-specific transport protein	similar to AL355832-13|CAB90980.1| percent identity: 45 in 688 aa putative PTS fructose-specific enzyme IIABC component	PTS system, fructoso-specific IIBC component	PTS system, fructose-specific permease, transmembrane protein	PTS system, fructose-specific enzyme II, BC component	Fructose-specific PTS system IIABC component	
ECOLI02100	1-phosphofructokinase	Putative 1-phosphofructokinase	Putative 1-phosphofructokinase	1-phosphofructokinase	Fructose-1-phosphate kinase	1-phosphofructokinase	FruK	1-phosphofructokinase	Fructose-1-phosphate kinase	1-phosphofructokinase	1-phosphofructokinase	Fructose-1-phosphate kinase and related fructose- 6-phosphate kinase	1-phosphofructokinase	1-phosphofructokinase	Putative 1-phosphofructokinase	1-phosphofructokinase	1-phosphofructokinase	1-phosphofructokinase	Putative 1-phosphofructokinase	identified by match to protein family HMM PF00294 1-phosphofructokinase	1-phosphofructokinase	1-phosphofructokinase	1-phosphofructokinase	fructose-1-phosphate kinase	Putative fructose-1-phosphate kinase	Putative phosphofructokinase	1-phosphofructokinase	1-phosphofructokinase	Putative phosphofructokinase	
ECOLI02101	Multiphosphoryl transfer protein	FruB	PTS system, fructose-specific IIA/FPR component	Multiphosphoryl transfer protein	Putative PTS system, fructose-specific IIA/FPR component	PTS system, fructose-specific IIA/FPr component	PTS system, fructose-specific IIA/FPR component	PTS system, fructose-specific IIa/Fpr component	PTS system, fructose-specific IIA/FPR component	Multiphosphoryl transfer protein	Phosphotransferase system	Residues 1 to 376 of 376 are 99 pct identical to residues 1 to 376 of a 376 aa protein from Escherichia coli O157:H7 ref: NP_311088.1 fructose-specific PTS system IIA component	Fpr protein	PTS system, fructose-specific IIA/FPr component	IPR000032: Phosphocarrier HPr protein; IPR001020: HPr histidine phosphorylation site; IPR002114: HPr serine phosphorylation site;IPR002178: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	similar to Salmonella typhi Ty2 fructose-specific IIA/FPR component of PTS system fructose-specific IIA/FPR component of PTS system	PTS system, fructose-specific II component , phosphocarrier p...	PTS system, fructose-specific IIA/FPr component	EIIA-Fru; fructose-permease IIA/FPr component; phosphotransferase enzyme II, A/FPr component; phosphotransferase FPr protein; Pseudo-HPr; EIII-Fru; fructose PTS diphosphoryl transfer protein; Similar to: HI0448, PTFA_HAEIN PTS system, fructose-specific IIA/FPr component	Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) PtsN protein	Multiphosphoryl transfer protein	Code: G; COG: COG4668 PTS system, fructose-specific IIA/fpr component	Code: G; COG: COG4668 PTS system fructose-specific IIA/fpr component	Code: G; COG: COG4668 PTS system, fructose-specific IIA/fpr component	PTS system, fructose-specific IIA/FPr component	Hypothetical protein	Fructose-specific PTS system IIA component	Hypothetical protein	multiphosphoryl transfer protein (MTP) (Phosphotransferase FPrprotein) (Pseudo-HPr) identified by match to protein family HMM PF00359; match to protein family HMM PF00381; match to protein family HMM TIGR01003	
ECOLI02103	UPF0153 protein yeiW	UPF0153 protein PA1578.1	Putative uncharacterized protein VV2403	Putative uncharacterized protein	putative proteinase inhibitor	UPF0153 protein yeiW	UPF0153 protein VC_1057	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2171	Predicted Fe-S-cluster oxidoreductase	Putative uncharacterized protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark proteinase inhibitor	Proteinase inhibitor	Putative uncharacterized protein	Putative uncharacterized protein	Na(+)/H(+) antiporter NhaC	Putative uncharacterized protein	Fe-S-cluster domain	conserved hypothetical protein	proteinase inhibitor	identified by match to protein family HMM PF03692 proteinase inhibitor	identified by similarity to SP:P58040; match to protein family HMM PF03692 conserved hypothetical protein	
ECOLI02102	Sugar efflux transporter B	MFS transporter family protein	Permease	Sugar efflux transporter	Sugar efflux transporter B	Sugar efflux transporter	Putative transport	Major Facilitator Superfamily (MFS) transporter	Residues 1 to 388 of 392 are 98 pct identical to residues 1 to 388 of a 393 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288753.1 putative transport	Putative membrane protein	IPR007114: Major facilitator superfamily proton efflux pump	similar to Salmonella typhi Ty2 sugar efflux transporter sugar efflux transporter	Sugar efflux transporter B	Code: GEPR; COG: COG0477 putative transport	major facilitator family transporter	identified by match to protein family HMM PF07690 putative transporter	Code: GEPR; COG: COG0477 putative transport	Major facilitator superfamily MFS_1	Code: GEPR; COG: COG0477 putative transport	Sugar efflux transporter B	major facilitator superfamily MFS_1	YeiO MFS transporter	putative transport Code: GEPR; COG: COG0477	Permease of the major facilitator superfamily protein	sugar efflux transporter B	Sugar efflux transporter precursor	Lactose/glucose:proton efflux pump	Putative uncharacterized protein	Sugar efflux transporter B	
ECOLI02103	UPF0153 protein yeiW	UPF0153 protein PA1578.1	Putative uncharacterized protein VV2403	Putative uncharacterized protein	putative proteinase inhibitor	UPF0153 protein yeiW	UPF0153 protein VC_1057	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2171	Predicted Fe-S-cluster oxidoreductase	Putative uncharacterized protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark proteinase inhibitor	Proteinase inhibitor	Putative uncharacterized protein	Putative uncharacterized protein	Na(+)/H(+) antiporter NhaC	Putative uncharacterized protein	Fe-S-cluster domain	conserved hypothetical protein	proteinase inhibitor	identified by match to protein family HMM PF03692 proteinase inhibitor	identified by similarity to SP:P58040; match to protein family HMM PF03692 conserved hypothetical protein	
ECOLI02104	Elongation factor P-like protein	Elongation factor P-like protein	Elongation factor P-like protein	similar to GB:M24538, GB:M24539, GB:M24540, GB:M24541, GB:M21219, GB:M21220, GB:M21221, SP:P01225, PID:182762, PID:182767, PID:511854, GB:M24538, GB:M24539, GB:M24540, GB:M24541, GB:M21219, GB:M21220, GB:M21221, SP:P01225, PID:182762, PID:182767, PID:511854, GB:M24538, GB:M24539, GB:M24540, GB:M24541, GB:M21219, GB:M21220, GB:M21221, SP:P01225, PID:182762, PID:182767,  and PID:511854; identified by sequence similarity; putative translation elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P-like protein	Elongation factor P-like protein	putative elongation factor P family protein	Elongation factor P-like protein	Elongation factor P-like protein	Elongation factor P	Elongation factor P-like protein	translation elongation factor EF-P	Elongation factor P-like protein	Elongation factor P-like protein	Elongation factor P 1	Elongation factor P 1	Elongation factor P-like protein	Elongation factor P	Residues 1 to 271 of 271 are 99 pct identical to residues 5 to 275 of a 275 aa protein from Escherichia coli K12 ref: NP_416676.1 putative elongation factor	Elongation factor P 1	Elongation factor P-like protein	Elongation factor P-like protein	Elongation factor P-like protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark elongation factor P	IPR001059: Elongation factor P (EF-P) putative elongation factor	similar to Salmonella typhimurium putative elongation factor putative elongation factor	Elongation factor P	
ECOLI02105	Uncharacterized oxidoreductase yeiQ	Hypothetical oxidoreductase yeiQ	Putative D-mannonate oxidoreductase	Putative oxidoreductase	Residues 4 to 491 of 491 are 97 pct identical to residues 1 to 488 of a 488 aa protein from Escherichia coli K12 ref: NP_416677.1 putative oxidoreductase	Putative D-mannonate oxidoreductase	Putative D-mannonate oxidoreductase	Code: G; COG: COG0246 putative oxidoreductase	Code: G; COG: COG0246 putative oxidoreductase	Code: G; COG: COG0246 putative oxidoreductase	Hypothetical oxidoreductase YeiQ	Putative D-mannonate oxidoreductase	Hypothetical oxidoreductase YeiQ	D-mannonate oxidoreductase	putative oxidoreductase Code: G; COG: COG0246	D-mannonate oxidoreductase	putative dehydrogenase, NAD-dependent	Fructuronate reductase	Putative mannitol dehydrogenase	Mannitol dehydrogenase family protein	Mannitol dehydrogenase domain	Predicted dehydrogenase, NAD-dependent	Mannitol dehydrogenase family protein	Mannitol dehydrogenase family protein	Mannitol dehydrogenase domain	Mannitol dehydrogenase family protein	Putative uncharacterized protein	Putative uncharacterized protein	Mannitol dehydrogenase domain protein	
ECOLI02106	Uncharacterized protein yeiR	Putative uncharacterized protein STY2448	putative cobalamin synthesis protein	Hypothetical protein yeiR	Putative uncharacterized protein	Cobalamin synthesis protein/P47K family protein	Putative uncharacterized protein	PMID: 1655697 best DB hits: BLAST: swissprot:P33030; YEIR_ECOLI HYPOTHETICAL 36.1 KD PROTEIN IN; E=1e-47 gb:AAG57311.1; AE005450_1 (AE005450) orf, hypothetical protein; E=8e-47 ddbj:BAA15982.1; (D90849) ORF_ID:o369#5; similar to [SwissProt; E=1e-44 COG: yeiR; COG0523 Putative GTPases (G3E family); E=1e-48 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.025 PF02492; Cobalamin synthesis protein/P; E=2.3e-13 conserved hypothetical protein-putative cobalamin synthesis protein CobW	Putative cobalamin synthesis protein	Putative uncharacterized protein yeiR	BH1519 protein	Putative GTPase	Residues 1 to 328 of 328 are 99 pct identical to residues 1 to 328 of a 328 aa protein from Escherichia coli K12 ref: NP_416678.1 orf, conserved hypothetical protein	Putative cobalamin synthesis protein	CobW/P47K family protein	putative cobalamin synthesis protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cobalamin synthesis protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative cobalamin synthesis protein	low-affinity zinc transport protein	Putative cobalamin synthesis protein	identified by similarity to OMNI:SO1502; match to protein family HMM PF02492 cobalamin synthesis protein/P47K family protein	hypothetical protein, similar to cobalamin synthesis related protein	identified by match to protein family HMM PF02492 cobalamin synthesis protein/P47K family protein	Similar to Bacillus halodurans hypothetical protein BH0366 TR:Q9KFV5 (EMBL:AP001508) (311 aa) fasta scores: E(): 4.7e-27, 31.190% id in 311 aa, and to Aquifex aeolicus cobalamin synthesis related protein CobW TR:O66539 (EMBL:AE000675) (292 aa) fasta scores: E(): 1.6e-16, 29.682% id in 283 aa putative cobalamin synthesis protein	Code: R; COG: COG0523 conserved hypothetical protein	Code: R; COG: COG0523 conserved hypothetical protein	conserved hypothetical protein	cobalamin synthesis protein, P47K	
ECOLI02107	Inner membrane protein yeiU	Putative membrane protein	Hypothetical protein yeiU	Putative membrane-bound phosphatase	Putative uncharacterized protein	Residues 1 to 249 of 249 are 98 pct identical to residues 1 to 249 of a 249 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288757.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to putative membrane protein YeiU of Escherichia coli	IPR000326: PA-phosphatase related phosphoesterase putative permease	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative permease	membrane protein, putative	Code: I; COG: COG0671 conserved hypothetical protein	Code: I; COG: COG0671 conserved hypothetical protein	conserved hypothetical protein	phosphoesterase, PA-phosphatase related	conserved hypothetical protein	Code: I; COG: COG0671; orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Membrane protein	PAP2 family protein identified by match to protein family HMM PF01569	Putative membrane protein precursor	Conserved membrane protein	Hypothetical protein	conserved hypothetical protein	
ECOLI02108	Lipoprotein spr	Putative lipoprotein	Lipoprotein spr precursor	Lipoprotein, NLP/P60 family	Lipoprotein	Lipoprotein spr	Residues 1 to 188 of 188 are 100 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288758.1 putative lipoprotein	Putative lipoprotein	Putative cell wall-associated hydrolase transmembrane protein	Lipoprotein spr	putative lipoprotein, suppresses thermosensitivity of prc mutants at low osmolality	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	Putative lipoprotein	NLP/P60	Code: M; COG: COG0791 putative lipoprotein	Code: M; COG: COG0791 putative lipoprotein	NLP/P60	putative lipoprotein	NLP/P60	Code: M; COG: COG0791 putative lipoprotein	Putative lipoprotein, suppresses thermosensitivity of prc mutants at low osmolality	NLP/P60 protein precursor	Putative lipoprotein precursor	Putative lipoprotein	NlpC/P60 family protein identified by match to protein family HMM PF00877	Lipoprotein precursor	Putative lipoprotein precursor	NLP/P60 protein PFAM: NLP/P60 protein KEGG: son:SO0061 lipoprotein, NLP/P60 family	
ECOLI02109	Protein rtn	Rtn protein	Putative uncharacterized protein rtn	Residues 1 to 518 of 518 are 99 pct identical to residues 1 to 518 of a 518 aa protein from Escherichia coli K12 ref: NP_416681.1 orf, conserved hypothetical protein	Putative membrane protein	IPR001633: EAL domain putative membrane protein involved in resistance to lambda and N4 phages	similar to Salmonella typhi CT18 rtn protein rtn protein	Putative membrane protein	Putative membrane protein involved in resistance to lambda and N4 phages	Code: T; COG: COG2200 conserved hypothetical protein	Code: T; COG: COG2200 conserved hypothetical protein	Code: T; COG: COG2200; orf conserved hypothetical protein	Rtn protein	Putative membrane protein	Putative uncharacterized protein rtn	Membrane protein	Putative membrane protein precursor	EAL domain protein PFAM: EAL domain protein KEGG: son:SO3821 rtn protein	conserved hypothetical protein	diguanylate phosphodiesterase PFAM: EAL domain protein KEGG: son:SO3821 rtn protein	Membrane protein	conserved hypothetical protein	Diguanylate phosphodiesterase precursor	EAL domain protein precursor	Diguanylate phosphodiesterase precursor	PFAM: EAL domain protein KEGG: spc:Sputcn32_0814 EAL domain protein diguanylate phosphodiesterase	Putative membrane protein involved in resistance to lambda and N4 phages	Putative uncharacterized protein	Putative cyclic diguanylate phosphodiesterase	
ECOLI02110	Uncharacterized protein yejA	Probable solute-binding protein	Peptide ABC transporter, periplasmic peptide- binding protein	ABC transporter, substrate binding protein	Putative transport system periplasmic binding protein	putative binding protein component ofABC transporter	Hypothetical protein yejA	identified by match to PFAM protein family HMM PF00496 ABC transporter, periplasmic substrate-binding protein, putative	Peptide ABC transporter, periplasmic peptide- binding protein, putative	Putative ABC transporter, periplasmic binding protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PERIPLASMIC BINDING PROTEIN	ABC transporter, periplasmic substrate-binding protein	Putative uncharacterized protein	PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN	Putative uncharacterized protein yejA	peptide ABC transporter, periplasmic peptide-binding protein	OppA	Residues 1 to 606 of 606 are 98 pct identical to residues 1 to 606 of a 606 aa protein from Escherichia coli O157:H7 ref: NP_311096.1 orf, conserved hypothetical protein	Putative substrate-binding transport protein	identified by match to protein family HMM PF00496 oligopeptide/dipeptide uptake family ABC transporter, periplasmic substrate-binding protein	Peptide ABC transporter	IPR000914: Bacterial extracellular solute-binding protein, family 5 putative ABC transporter periplasmic binding protein	similar to Salmonella typhi CT18 putative transport system periplasmic binding protein putative transport system periplasmic binding protein	Periplasmic binding component of ABC-type transport system	similar to BR0010, ABC transporter, periplasmic substrate-binding protein, hypothetical ABC transporter, periplasmic substrate-binding protein, hypothetical	Putative ABC transporter, oligo-dipeptide/nickel binding protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative oligopeptide transport protein (ABC superfamily, peri_bind)	oligopeptide-binding protein OppA	Putative ABC transporter periplasmic binding protein	
ECOLI02111	Inner membrane ABC transporter permease protein yejB	Probable permease of ABC transporter	ABC-type transport system, permease component	ABC transporter, membrane spanning protein	Putative binding-protein-dependent transporter	Putative ABC transport system, membrane protein	putative transmembrane ABC transporterprotein	Hypothetical ABC transporter permease protein yejB	identified by match to PFAM protein family HMM PF03594 ABC transporter, permease protein	ABC transporter, permease protein	Peptide ABC transporter, permease protein, putative	Putative binding-protein-dependent transporter	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN	PUTATIVE PERMEASE OF ABC TRANSPORTER	Oligopeptide ABC transporter, permease protein	OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN OPPB	Putative transmembrane ABC transporter protein	Inner membrane ABC transporter permease protein yejB	peptide ABC transporter, permease protein	Peptide ABC transporter, permease protein	ABC-type transport system, permease component	Peptide ABC transporter, permease protein	Residues 1 to 364 of 364 are 99 pct identical to residues 1 to 364 of a 364 aa protein from Escherichia coli O157:H7 ref: NP_311097.1 putative transport system permease protein	Putative ABC transporter integral membrane subunit	Probable transmembrane abc transporter protein	identified by match to protein family HMM PF00528 oligopeptide/dipeptide uptake family ABC transporter, permease protein	Peptide ABC transporter	putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component	similar to Salmonella typhi CT18 putative binding-protein-dependent transporter putative binding-protein-dependent transporter	
ECOLI02112	Inner membrane ABC transporter permease protein yejE	Dipeptide transport system permease protein dppC	ABC transporter, membrane spanning protein	Putative binding-protein-dependent transporter	Oligopeptide ABC transporter, permease protein	Putative ABBC transport system, membrane protein	Hypothetical ABC transporter permease protein yejE	identified by match to protein family HMM PF00528 oligopeptide ABC transporter, permease protein	similar to GP:15155074, and GP:17983985; identified by sequence similarity; putative ABC transporter, permease protein	Peptide ABC transporter, permease protein, putative	Putative ABC transporter , permease protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN	ABC transporter, permease protein	PUTATIVE PERMEASE OF ABC TRANSPORTER	Oligopeptide ABC transporter, permease protein	ABC transporter, permease protein	OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN OPPC	Putative peptide ABC transporter, permease protein	Putative transport system permease protein	peptide ABC transporter, permease protein	Peptide ABC transporter, permease protein	Oligopeptide ABC transporter	Peptide ABC transporter, permease protein	Dipeptide ABC transport system permease protein	Residues 1 to 341 of 341 are 99 pct identical to residues 1 to 341 of a 341 aa protein from Escherichia coli O157:H7 ref: NP_311098.1 putative transport system permease protein	Putative ABC transporter integral membrane subunit	Probable transmembrane abc transporter protein	identified by similarity to SP:P33915; match to protein family HMM PF00528 oligopeptide/dipeptide uptake family ABC transporter, permease protein	Peptide ABC transporter	
ECOLI02113	Uncharacterized ABC transporter ATP-binding protein yejF	Probable ATP-binding component of ABC transporter	ABC transporter, nucleotide binding/ATPase protein	Putative ABC-transporter ATP-binding protein	Hypothetical ABC transporter ATP-binding protein yejF	identified by match to PFAM protein family HMM PF02492 ABC transporter, ATP-binding protein	Putative ABC-transporter, ATP-binding protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN	ATP-BINDING COMPONENT OF ABC TRANSPORTER	OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD	Putative ATP-binding component of a transport system	peptide ABC transporter, ATP-binding protein	Peptide ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Residues 17 to 545 of 545 are 98 pct identical to residues 1 to 529 of a 529 aa protein from Escherichia coli K12 ref: NP_416685.1 putative ATP-binding component of a transport system	Putative ABC transporter ATP-binding subunit	identified by similarity to SP:P33916; match to protein family HMM PF00005 oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein	Peptide ABC transporter	dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ATPase component of ABC-type transport system, contain duplicated ATPase domain	similar to Salmonella typhi CT18 putative ABC-transporter ATP-binding protein putative ABC-transporter ATP-binding protein	similar to BR0006, ABC transporter, ATP-binding protein ABC transporter, ATP-binding protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative oligopeptide transport protein (ABC superfamily, atp_bind)	duplicated ATPase; COG1123 ABC-type uncharacterized transport system	Peptide ABC transporter, ATP-binding protein	Putative ATPase component of ABC-type transport system	identified by match to protein family HMM PF00005 ABC transporter, ATP-binding protein	ABC transporter related	ABC transporter, ATPase subunit	
ECOLI02114	Uncharacterized protein yejG	Hypothetical protein yejG	Putative uncharacterized protein	Putative uncharacterized protein yejG	Residues 1 to 114 of 114 are 99 pct identical to residues 1 to 114 of a 114 aa protein from Escherichia coli K12 ref: NP_416686.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein yejG of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yejG	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yejG	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	
ECOLI02115	Bicyclomycin resistance protein	Bicyclomycin resistance protein homolog	similar to uniprot|P38124 Saccharomyces cerevisiae YBR008c FLR1;	Putative uncharacterized protein PH0718	Bcr	Bicyclomycin resistance protein	putative multidrug resistance protein	Bicyclomycin resistance protein	Multidrug resistance protein	go_component: vacuolar membrane [goid 0005774]; go_component: plasma membrane [goid 0005886]; go_function: spermine transporter activity [goid 0000297]; go_process: polyamine transport [goid 0015846] hypothetical protein	Bicyclomycin resistance protein	BICYCLOMYCIN RESISTANCE PROTEIN	Multidrug resistance protein	Bicyclomycin resistance protein; transmembrane protein	Residues 1 to 396 of 396 are 98 pct identical to residues 1 to 396 of a 396 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288765.1 bicyclomycin resistance protein; transmembrane protein	Probable drug resistance translocator protein	Bicyclonycin resistance protein	IPR007114: Major facilitator superfamily MFS family multidrug transport protein, bicyclomycin resistance protein	Permease of the major facilitator superfamily	similar to Salmonella typhi CT18 bicyclomycin resistance protein bicyclomycin resistance protein	MFS family, drug (Bicyclomycin) efflux pump	bicyclomycin resistance protein	Similar to: HI1242, BCR_HAEIN bicyclomycin resistance protein	Permeases of the major facilitator superfamily ProP protein	Similar to Q9CKS3 Bcr from Pasteurella multocida (399 aa). FASTA: opt: 568 Z-score: 616.5 E(): 1.9e-26 Smith-Waterman score: 568; 30.518 identity in 367 aa overlap. Contains a frameshift after aa 85 Putative drug transport protein. pseudo major facilitator superfamily (MFS) transport protein, pseudogene	Bicyclomycin resistance protein	Drug resistance transporter Bcr/CflA subfamily:General substrate transporter:Major facilitator superfamily (MFS)	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 15155219; Product type t : transporter putative efflux pump	bicyclomycin resistance protein	
ECOLI02116	Ribosomal small subunit pseudouridine synthase A	Pseudouridine synthase	Ribosomal small subunit pseudouridine synthase A	Uncharacterized RNA pseudouridine synthase aq_554	Pseudouridine synthase	Pseudouridine synthase	Ribosomal small subunit pseudouridine synthase A	Pseudouridine synthase	Pseudouridine synthase	Ribosomal small subunit pseudouridine synthase A	Pseudouridine synthase	Pseudouridine synthase	hypothetical 16S rRNA uridine-516 pseudouridylate synthase	Ribosomal small subunit pseudouridine synthase A	Ribosomal small subunit pseudouridine synthase A	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Ribosomal small subunit pseudouridine synthase A	Ribosomal small subunit pseudouridine synthase A	CDS_ID OB2299 16S pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Ribosomal small subunit pseudouridine synthase A	Pseudouridine synthase	Residues 1 to 231 of 231 are 100 pct identical to residues 1 to 231 of a 231 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288766.1 16S pseudouridylate 516 synthase	Ribosomal small subunit pseudouridine synthase A	Pseudouridine synthase	Pseudouridine synthase	
ECOLI02117	Uncharacterized protein yejH	DNA repair helicase	DNA or RNA helicase	Putative helicase	putative ATP-dependent helicase	Putative ATP-dependent helicase	Hypothetical protein yejH	Helicase-related protein	Helicase	Putative helicase	Helicase-related protein	Putative ATP-dependent helicase	Residues 1 to 586 of 586 are 99 pct identical to residues 1 to 586 of a 586 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288767.1 putative ATP-dependent helicase	Putative DEAD box helicase family protein	Similar to putative ATP-dependent helicase YejH of Escherichia coli	putative helicase	IPR001410: DEAD/DEAH box helicase; IPR001650: Helicase, C-terminal putative ATP-dependent helicase	similar to Salmonella typhi CT18 putative helicase putative helicase	Putative DEAD box helicase family protein	hypothetical protein	Putative ATP-dependent helicase	Code: KL; COG: COG1061 putative ATP-dependent helicase	Evidence 2b : Function of strongly homologous gene; Product type e : enzyme putative ATP-dependent helicase with nucleoside triP hydrolase domain	Code: KL; COG: COG1061 putative ATP-dependent helicase	type III restriction enzyme, res subunit	Code: KL; COG: COG1061 putative ATP-dependent helicase	Putative uncharacterized protein	Type III restriction enzyme, res subunit	Type III restriction enzyme, res subunit	
ECOLI02118	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	putative ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	Residues 33 to 126 of 126 are 100 pct identical to residues 1 to 94 of a 94 aa protein from Escherichia coli K12 ref: NP_416690.1 50S ribosomal subunit protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	IPR001021: Ribosomal protein L25 50S ribosomal subunit protein L25	similar to Salmonella typhi CT18 50s ribosomal protein L25 50s ribosomal protein L25	50S ribosomal protein L25	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type s : structure 50S ribosomal protein L25	LSU ribosomal protein L25P	Similar to: HI1630, RL25_HAEIN 50S ribosomal protein L25	Ribosomal protein L25 (general stress protein Ctc) RplY protein	Similar to RL25_HAEIN (P45281) 50S ribosomal protein L25 from Haemophilus influenzae (95 aa). FASTA: opt: 317 Z-score: 443.4 E(): 8.3e-17 Smith-Waterman score: 317; 48.913 identity in 92 aa overlap. 50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	50S ribosomal protein L25	
ECOLI02119	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA 1	Nucleoid-associated protein ndpA	putative nucleoid-associated bacterial protein	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	Residues 1 to 335 of 335 are 99 pct identical to residues 1 to 335 of a 335 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288769.1 orf, conserved hypothetical protein	Nucleoid-associated protein ndpA	Nucleoid-associated protein ndpA	nucleotide associated protein, present in spermidine nucleoids	similar to Salmonella typhi CT18 nucleoid-asociated protein nucleoid-asociated protein	Nucleoid-associated protein ndpA	37 kDa nucleoid-associated protein	Similar to: HI0839, NDPA_HAEIN nucleoid-associated protein NdpA	Nucleoid-associated protein Hypothetical protein	Nucleoid-associated protein ndpA	Nucleoid-associated protein	Nucleoid-associated protein ndpA	identified by similarity to SP:P33920; match to protein family HMM PF04245 37-kD nucleoid-associated bacterial protein	identified by similarity to SP:P33920; match to protein family HMM PF04245 nucleoid-associated protein NdpA	37kDa nucleoid-associated bacterial protein	
ECOLI02120	UPF0352 protein yejL	UPF0352 protein PM1884	UPF0352 protein VV1166	UPF0352 protein yejL	conserved hypothetical protein	UPF0352 protein yejL	UPF0352 protein VC_2040	UPF0352 protein SO_2176	UPF0352 protein ECA2748	UPF0352 protein VP2129	UPF0352 protein yejL	UPF0352 protein VV1_3121	Residues 1 to 75 of 75 are 97 pct identical to residues 1 to 75 of a 75 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288770.1 orf, conserved hypothetical protein	UPF0352 protein YPO1261/y2923/YP_0880	UPF0352 protein plu2871	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0352 protein YPTB1297	hypothetical protein	Similar to: HI0840, YEJL_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	UPF0352 protein yejL	identified by similarity to OMNI:NTL01SF2126; match to protein family HMM PF07208 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3082 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3082 conserved hypothetical protein	Code: S; COG: COG3082; orf conserved hypothetical protein	UPF0352 protein yejL	
ECOLI02121	Inner membrane protein yejM	Putative uncharacterized protein	Predicted hydrolase	Inner membrane protein yejM	hypothetical hydrolase of alkaline phosphatase superfamily	Inner membrane protein yejM	Putative uncharacterized protein	Putative uncharacterized protein	Putative sulphatase	Putative uncharacterized protein VP2130	Inner membrane protein yejM	Phosphoglycerol transferase MdoB and related protein-like protein, alkaline phosphatase superfamily	Predicted hydrolase of alkaline phosphatase superfamily	Residues 1 to 586 of 586 are 99 pct identical to residues 1 to 586 of a 586 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288771.1 putative sulfatase	Putative membrane protein	Similar unknown protein YejM of Escherichia coli	IPR000531: TonB-dependent receptor protein putative hydrolase of alkaline phosphatase superfamily	similar to Salmonella typhi CT18 putative sulphatase putative sulphatase	Putative membrane protein	phosphoglycerol transferase MdoB and related proteins, alkaline phosphatase superfamily	Similar to: HI0841, YEJM_HAEIN predicted hydrolase of alkaline phosphatase superfamily	Predicted hydrolase of alkaline phosphatase superfamily Hypothetical protein	Membrane-associated hydrolase of alkaline phosphatase superfamily	Inner membrane protein yejM	identified by similarity to OMNI:NTL01YP1193 putative membrane protein	putative sulphatase	Code: R; COG: COG3083 putative sulfatase	Code: R; COG: COG3083 putative sulfatase	conserved hypothetical protein	

ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	
ECOLI02122	Nitrate/nitrite response regulator protein narP	Response regulator	Nitrate/nitrite response regulator protein NarP	putative nitrate/nitrite response regulator protein	Nitrate/nitrite response regulator protein narP	Nitrate/nitrite response regulator	Nitrate/nitrite response regulator	Response regulator	Residues 1 to 225 of 225 are 98 pct identical to residues 1 to 225 of a 225 aa protein from Escherichia coli gb: AAA16411.1 narP	Nitrate/nitrite response regulator protein NarP	Nitrate/nitrite response regulator protein NarP	IPR000792: Bacterial regulatory protein, LuxR family; IPR001789: Response regulator receiver response regulator in two-component regulatory system with NarQ (or NarX)	similar to Salmonella typhi CT18 nitrate/nitrite response regulator protein NarP nitrate/nitrite response regulator protein NarP	Nitrate/nitrite response regulator protein NarP	nitrate/nitrite response regulator protein NarP	Similar to: HI0726, NARP_HAEIN nitrate/nitrite response regulator protein	Response regulator in two-component regulatory system with NarQ	sensor NarQ; Code: TK; COG: COG2197 nitrate/nitrite response regulator	sensor NarQ; Code: TK; COG: COG2197 nitrate/nitrite response regulator	sensor NarQ; Code: TK; COG: COG2197 nitrate/nitrite response regulator	Nitrate/nitrite response regulator protein NarP	Nitrate/nitrite response regulator protein NarP	Nitrate/nitrite response regulator protein NarP	Nitrate/nitrite response regulator protein	Nitrate/nitrite response regulator protein NarP	DNA-binding response regulator, LuxR family identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545	Nitrate/nitrite response regulator protein NarP	Two-component system nitrate/nitrite response regulator NarP	nitrate/nitrite response regulator Code: TK; COG: COG2197	
ECOLI02123	Cytochrome c-type biogenesis protein ccmH	CcmH	Cytochrome c-type biogenesis protein H1	Cytochrome c-type biogenesis protein ccmH	Possible subunit of heme lyase	Residues 1 to 350 of 350 are 100 pct identical to residues 1 to 350 of a 350 aa protein from Escherichia coli K12 ref: NP_416698.1 possible subunit of heme lyase	IPR001440: TPR repeat; IPR005616: Cytochrome C biogenesis protein putative heme lyase subunit, cytochrome c-type biogenesis	similar to Salmonella typhi Ty2 cytochrome c-type biogenesis protein H1 cytochrome c-type biogenesis protein H1	Similar to: HI0934, NRFF_HAEIN formate-dependent nitrite reductase complex nrfFG subunit	Code: O; COG: COG4235 possible subunit of heme lyase	Code: O; COG: COG4235 possible subunit of heme lyase	Code: O; COG: COG4235 possible subunit of heme lyase	Cytochrome c-type biogenesis protein CcmH	cytochrome C biogenesis protein	Cytochrome c-type biogenesis protein CcmH	TPR repeat protein	possible subunit of heme lyase Code: O; COG: COG4235	heme lyase, CcmH subunit	TPR-repeat-containing protein	Cytochrome C-type biogenesis protein	Possible subunit of heme lyase	Cytochrome c-type biogenesis family protein	Heme lyase, CcmH subunit	Cytochrome c-type biogenesis family protein	Cytochrome C biogenesis protein precursor	Cytochrome c-type biogenesis family protein	Putative uncharacterized protein	Putative uncharacterized protein	Cytochrome c-type biogenesis family protein	
ECOLI02124	Thiol:disulfide interchange protein dsbE	Thioredoxin family protein	Thiol:disulfide interchange protein dsbE	Thiol:disulfide interchange protein dsbE	Thiol:disulfide interchange protein CycY	Thiol:disulfide interchange protein dsbE	Thiol:disulfide interchange protein dsbE	Thiol-disulfide interchange protein CcmG	Cytochrome c biogenesis protein, thiol:disulfide interchange protein	CcmG protein	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein dsbE	Thiol:disulfide interchange protein tlpA	Thioredoxin family protein	putative thiol:disulfide interchange protein DsbE	Thiol:disulfide interchange protein dsbE	thioredoxin family protein	similar to GP:14024409; identified by sequence similarity; putative thiol:disulfide interchange protein, thioredoxin family	Thiol:disulfide interchange protein dsbE	Thiol:disulfide interchange protein DsbE	Thiol:disulfide interchange protein	Thiol-disulfide isomerase and thioredoxins	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE THIOL:DISULFIDE INTERCHANGE PROTEIN (CYTOCHROME C BIOGENESIS PROTEIN)	Thiol:disulfide interchange protein DsbE	THIOL:DISULFIDE INTERCHANGE PROTEIN CYCY	Thiol:disulfide interchange protein DsbE	Thiol:disulfide interchange protein dsbE	cytochrome c biogenesis protein CycX	Putative cytochrome c biogenesis protein, thiol:disulfide interchange protein	
ECOLI02125	Cytochrome c-type biogenesis protein ccmF	C-type cytochrome biogenesis membrane protein	Cytochrome c-type biogenesis protein ccmF	Cytochrome c-type biogenesis protein CycK	CcmF	Cytochrome c-type biogenesis protein ccmF	Cytochrome c-type biogenesis protein CcmF	Cytochrome C-type biogenesis protein ccmF	Cytochrome c-type synthesis protein	Cytochrome c-type biogenesis protein F1	Putative cytochrome c-type biogenesis protein CcmF	Cytochrome c-type biogenesis protein ccmF	cytochrome c-type biogenesis protein CcmF	identified by match to PFAM protein family HMM PF03600 cytochrome c-type biogenesis protein CcmF	Cytochrome c-type biogenesis protein CcmF	Cytochrome c-type biogenesis protein CcmF	Cytochrome C-type biogenesis protein	Cytochrome c-type biogenesis protein CcmF	Cytochrome C-type biogenesis protein	predicted by Codon_usage predicted by Homology predicted by FrameD CYTOCHROME C-TYPE BIOGENESIS TRANSMEMBRANE PROTEIN	Cytochrome c-type biogenesis protein CcmF	Cytochrome C-type biogenesis protein	CYTOCHROME C-TYPE BIOGENESIS PROTEIN CYCK	Cytochrome c-type biogenesis protein CcmF	Cytochrome c-type biogenesis protein	cytochrome c-type synthesis protein cycK	CycK cytochrome c-type synthesis protein	Cytochrome c-type biogenesis protein CcmF	Residues 1 to 647 of 647 are 99 pct identical to residues 1 to 647 of a 647 aa protein from Escherichia coli O157:H7 ref: NP_311112.1 cytochrome c-type biogenesis protein	
ECOLI02126	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	putative cytochrome c-type biogenesis proteinCcmE	Cytochrome c-type biogenesis protein ccmE	similar to GB:L04510, SP:P36406, and PID:292070; identified by sequence similarity; putative cytochrome c-type biogenesis protein CcmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	predicted by Codon_usage predicted by Homology predicted by FrameD CYTOCHROME C-TYPE BIOGENESIS TRANSMEMBRANE PROTEIN	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	cytochrome-c biosynthesis heme-carrier protein cycJ	Cytochrome c-type biogenesis protein ccmE	Cytochrome c-type biogenesis protein ccmE	
ECOLI02127	Heme exporter protein D	CcmD	Heme exporter protein D	Heme exporter protein D1	Heme exporter protein D	Heme exporter protein D	Heme exporter protein CcmD	Heme exporter protein D	Heme exporter protein D	Heme exporter protein D	Residues 1 to 69 of 69 are 100 pct identical to residues 1 to 69 of a 69 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288778.1 heme exporter protein C	Putative heme exporter protein D	heme exporter protein C, cytochrome c-type biogenesis protein	similar to Salmonella typhi Ty2 heme exporter protein D1 heme exporter protein D1	cytochrome c-type biogenesis protein CcmD; Similar to: HI1092, CCMD_HAEIN heme exporter protein D	Heme exporter protein D CcmD protein	Heme exporter protein C	identified by similarity to SP:P36770; match to protein family HMM PF04995 heme exporter protein CcmD	Code: U; COG: COG3114 heme exporter protein C	Evidence 2b : Function of strongly homologous gene; PubMedId : 7635817, 10998170; Product type m : membrane component heme exporter protein D (Cytochrome c-type biogenesis protein ccmD)	Code: U; COG: COG3114 heme exporter protein C	heme exporter protein D	Code: U; COG: COG3114 heme exporter protein C	Cytochrome c-type biogenesis protein CcmD	Heme exporter protein D	Heme exporter protein D (CcmD) precursor	Putative heme exporter protein D precursor	Heme exporter protein D (CcmD) precursor	Heme exporter protein D (CcmD) precursor	
ECOLI02128	Heme exporter protein C	Heme exporter protein C/cytochrome C-type biogenesis protein	Heme exporter protein C	Heme exporter protein C	Heme exporter protein C	CcmC	Heme exporter protein C	Heme exporter protein C	Cytochrome c-type biogenesis protein, heme exporter protein C	Heme exporter protein C	ABC transporter, membrane spanning protein	Heme exporter protein C2	Heme exporter protein CcmC	Putative heme exporter protein C	Heme exporter protein C	similar to SP:P30962; identified by sequence similarity; putative heme exporter protein CcmC	Cytochrome c-type biogenesis protein CcmC	Heme exporter protein C	Heme exporter protein C	Putative heme export protein	Heme exporter protein CcmC	Heme exporter protein C	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE HEME EXPORTER C (CYTOCHROME C-TYPE BIOGENESIS PROTEIN) TRANSMEMBRANE	Heme exporter protein CcmC	Putative heme export protein	HEME EXPORTER PROTEIN C	Heme exporter protein C	Heme exporter protein C	heme exporter protein C	
ECOLI02129	Heme exporter protein B	Heme exporter, protein B	Heme ABC transporter membrane protein	Heme exporter protein B	ABC transporter heme permease	Heme exporter protein B	Heme exporter protein B	CcmB	Heme exporter protein B	Heme exporter protein B	Cytochrome c-type biogenesis protein, heme exporter protein B	Heme exporter protein B	ABC transporter, membrane spanning protein	Heme exporter protein B1	Heme exporter protein CcmB	putative heme exporter protein B	Heme exporter protein B	identified by match to PFAM protein family HMM PF03379 heme exporter protein CcmB	Cytochrome c-type biogenesis protein CcmB	Heme exporter protein B	Heme exporter protein B	Heme exporter protein CcmB	Heme exporter protein B	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE HEME EXPORTER B (CYTOCHROME C-TYPE BIOGENESIS PROTEIN) TRANSMEMBRANE	Heme exporter protein CcmB	Heme exporter protein B	HEME EXPORTER PROTEIN B	Heme exporter protein B	Heme exporter protein B	
ECOLI02130	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Putative heme exporter protein A	Cytochrome c biogenesis ATP-binding export protein ccmA	identified by match to TIGR protein family HMM TIGR01187 heme exporter protein CcmA	ABC transporter, ATP-binding protein	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE HEME EXPORTER A (CYTOCHROME C-TYPE BIOGENESIS ATP-BINDING PROTEIN) ABC TRANSPORTER	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	Cytochrome c biogenesis ATP-binding export protein ccmA	cytochrome c biogenesis protein CycV, ATP-BINDING PROTEIN	Cytochrome c biogenesis ATP-binding export protein ccmA	
ECOLI02131	Cytochrome c-type protein napC	NapC	Putative periplasmic cytochrome C	Periplasmic nitrate reductase, cytochrome c-type protein	Cytochrome c-type protein NapC	Cytochrome c-type protein napC	Cytochrome C-type protein	Periplasmic nitrate reductase, cytochrome c-type protein	Cytochrome c-type protein napC	Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit	Residues 1 to 200 of 200 are 99 pct identical to residues 1 to 200 of a 200 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288782.1 cytochrome c-type protein	Cytochrome C-type protein NapC	Probable tetraheme cytochrome c-type	identified by similarity to SP:Q9S1E6; match to protein family HMM PF03264 cytochrome c-type protein nrfH	IPR000345: Cytochrome c heme-binding site; IPR005126: NapC/NirT cytochrome c, N-terminal periplasmic nitrate reductase, cytochrome c-type protein	similar to Salmonella typhi CT18 cytochrome c-type protein NapC cytochrome c-type protein NapC	Putative uncharacterized protein	Cytochrome C-type protein NapC	cytochrome c-type protein NapC	Similar to: HI0348, NAPC_HAEIN cytochrome C-type protein NapC	Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit TorC protein	Periplasmic nitrate reductase	cytochrome c-type protein	Code: C; COG: COG3005 cytochrome c-type protein	NapC/NirT cytochrome c-like	Code: C; COG: COG3005 cytochrome c-type protein	NapC/NirT cytochrome c-like	Code: C; COG: COG3005 cytochrome c-type protein	Cytochrome c-type protein NapC	
ECOLI02132	Diheme cytochrome c napB	Cytochrome c-type protein NapB	Diheme cytochrome c napB	Diheme cytochrome C protein	Cytochrome c-type protein	Nitrate reductase cytochrome c-type subunit	Residues 1 to 156 of 156 are 100 pct identical to residues 1 to 156 of a 156 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288783.1 cytochrome c-type protein	Cytochrome C-type protein NapB	IPR000345: Cytochrome c heme-binding site periplasmic nitrate reductase, small subunit, cytochrome C550, in complex with NapA	similar to Salmonella typhi CT18 cytochrome c-type protein NapB precursor cytochrome c-type protein NapB precursor	Cytochrome C-type protein NapB	Periplasmic small subunit nitrate reductase of cytochrome C550	Nitrate reductase cytochrome c-type subunit (NapB)	Code: C; COG: COG3043 cytochrome c-type protein	Code: C; COG: COG3043 cytochrome c-type protein	Code: C; COG: COG3043 cytochrome c-type protein	Diheme cytochrome C NapB	Cytochrome C-type protein NapB precursor	Cytochrome c-type protein	Periplasmic nitrate reductase	Cytochrome C-type protein NapB precursor	Cytochrome C-type protein NapB precursor	cytochrome c-type protein Code: C; COG: COG3043	Cytochrome C-type protein NapB precursor	nitrate reductase periplasmic cytochrome c-type subunit NapB PFAM: Nitrate reductase cytochrome c-type subunit (NapB) KEGG: ppr:PBPRA0854 putative periplasmic nitrate reductase,cytochrome c-type protein	nitrate reductase, small, cytochrome C550 subunit, periplasmic	Putative uncharacterized protein	Adenylate kinase	KEGG: vco:VC0395_0618 periplasmic nitrate reductase, cytochrome c-type protein periplasmic nitrate reductase, cytochrome c-type protein	
ECOLI02133	Ferredoxin-type protein napH	Ferredoxin-type protein napH homolog	Polyferredoxin	Polyferredoxin	NapH	Putative ferredoxin	Polyferredoxin	Ferredoxin-type protein NapH	putative ferredoxin-type protein	Ferredoxin-type protein napH	Iron-sulfur cluster-binding protein napH	Ferredoxin-type protein	NapH protein	Ferredoxin-type protein NapH	Ferredoxin-type protein: electron transfer	Iron-sulfur cluster-binding protein	Polyferredoxin	Residues 1 to 287 of 287 are 100 pct identical to residues 1 to 287 of a 287 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288784.1 ferredoxin-type protein: electron transfer	identified by similarity to SP:P33934; match to protein family HMM PF00037 ferredoxin-type protein NapH	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain ferredoxin-type protein: electron transfer	similar to Salmonella typhi CT18 ferredoxin-type protein NapH ferredoxin-type protein NapH	Putative uncharacterized protein	Similar to: HI0346, NAPH_HAEIN ferredoxin-type protein NapH	Polyferredoxin NapH protein	Ferredoxin-type protein	ferredoxin-type protein NapH	Ferredoxin-type protein, NapH/MauN family	Code: C; COG: COG0348 ferredoxin-type protein: electron transfer	electron transfer; Code: C; COG: COG0348 ferredoxin-type protein	
ECOLI02134	Ferredoxin-type protein napG	NapG	Putative ferredoxin	Ferredoxin	Ferredoxin-type protein NapG	hypothetical ferredoxin-type protein napG	Ferredoxin-type protein napG	Iron-sulfur cluster-binding protein NapG	Ferredoxin-type protein	NapG protein	Ferredoxin-type protein	Ferredoxin-type protein: electron transfer	Ferredoxin	Residues 1 to 231 of 231 are 100 pct identical to residues 1 to 231 of a 231 aa protein from Escherichia coli K12 ref: NP_416709.1 ferredoxin-type protein: electron transfer	identified by similarity to SP:P33936; match to protein family HMM PF00037; match to protein family HMM TIGR00397 ferredoxin-type protein NapG	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain ferredoxin-type protein: electron transfer	similar to Salmonella typhi CT18 ferredoxin-type protein NapG ferredoxin-type protein NapG	Putative uncharacterized protein	Similar to: HI0345, NAPG_HAEIN ferredoxin-type protein NapG	Ferredoxin 2 NapF protein	Ferredoxin-type protein	ferredoxin-type protein NapG	MauM/NapG ferredoxin-type protein	Code: C; COG: COG1145 ferredoxin-type protein: electron transfer	electron transfer; Code: C; COG: COG1145 ferredoxin-type protein	Periplasmic nitrate reductase subunit NapG	electron transfer; Code: C; COG: COG1145 ferredoxin-type protein	Ferredoxin-type protein NapG	MauM/NapG family ferredoxin-type protein precursor	
ECOLI02135	Periplasmic nitrate reductase	Periplasmic nitrate reductase	Periplasmic nitrate reductase precursor	Periplasmic nitrate reductase	Putative periplasmic nitrate reductase	Periplasmic nitrate reductase precursor	Periplasmic nitrate reductase	Periplasmic nitrate reductase precursor	Periplasmic nitrate reductase	Nitrate reductase	Periplasmic nitrate reductase	Periplasmic nitrate reductase	Periplasmic nitrate reductase	Periplasmic nitrate reductase	Residues 1 to 828 of 828 are 99 pct identical to residues 1 to 828 of a 828 aa protein from Escherichia coli K12 ref: NP_416710.1 probable nitrate reductase 3	Periplasmic nitrate reductase	identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; match to protein family HMM TIGR01706 periplasmic nitrate reductase, large subunit	IPR006655: Prokaryotic molybdopterin oxidoreductase periplasmic nitrate reductase, large subunit, in complex with NapB	similar to Salmonella typhi CT18 probable nitrate reductase probable nitrate reductase	Periplasmic nitrate reductase	Periplasmic nitrate reductase	nitrate reductase	Similar to: NAPA_ECOLI periplasmic nitrate reductase	Anaerobic dehydrogenases, typically selenocysteine-containing BisC protein	Periplasmic nitrate reductase	periplasmic nitrate reductase	Twin-arginine translocation pathway signal:Periplasmic nitrate reductase, large subunit	Code: C; COG: COG0243 probable nitrate reductase 3	Code: C; COG: COG0243 probable nitrate reductase 3	
ECOLI02136	Protein napD	Protein napD	NapD	NapD protein of periplasmic nitrate reductase	NapD protein	Putative napAB assembly protein	putative NapD protein	NapD protein	NapD protein	NapAB assembly protein	NapD protein	Protein napD	Uncharacterized protein	Residues 1 to 87 of 87 are 100 pct identical to residues 1 to 87 of a 87 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288787.1 orf, conserved hypothetical protein	Putative uncharacterized protein napD	similar to Salmonella typhi Ty2 putative napAB assembly protein putative napAB assembly protein	Putative uncharacterized protein napD	Similar to: HI0343, NAPD_HAEIN NapD	Uncharacterized protein involved in formation of periplasmic nitrate reductase NapD protein	Periplasmic nitrate reductase	possible napD protein	Code: P; COG: COG3062 conserved hypothetical protein	Code: P; COG: COG3062 conserved hypothetical protein	NapD	Code: P; COG: COG3062; orf conserved hypothetical protein	NapD protein	Hypothetical protein precursor	NapD family protein	NapD protein, subunit of nitrate reductase, periplasmic	
ECOLI02137	Ferredoxin-type protein napF	Ferredoxin-type protein napF homolog	NapF	Ferredoxin protein NapF	Ferredoxin	Methylamine utilization ferredoxin-type protein mauM	Periplasmic nitrate reductase, ferredoxin-like protein	Ferredoxin-type protein NapF	Hypothetical iron-sulfur cluster-binding protein NapF	Ferredoxin-type protein napF	Iron-sulfur cluster-binding protein NapF	Ferredoxin-type protein NapF	Ferredoxin-type protein	glimmer prediction picked ORF starting long upstream, overlapping real napE; predict start at Met within original ORF based on homology with other napF NapF Ferredoxin component of periplasmic nitrate reductase	NapF protein	Iron-sulfur cluster-binding protein NapF	Ferredoxin-type protein napF	Methylamine utilization ferredoxin-type protein	Residues 1 to 164 of 164 are 97 pct identical to residues 1 to 164 of a 164 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288788.1 ferredoxin-type protein: electron transfer	Ferredoxin-type protein NapF	similar to Salmonella typhi CT18 ferredoxin-type protein NapF ferredoxin-type protein NapF	Ferredoxin-type protein NapF	ferredoxin-type protein NapF	Similar to: HI0342, NAPF_HAEIN ferredoxin-type protein NapF	Ferredoxin 2 NapF protein	Ferredoxin-type protein	identified by similarity to SP:P33939; match to protein family HMM PF00037; match to protein family HMM TIGR00402 ferredoxin-type protein NapF	ferredoxin-type protein NapF	Ferredoxin-type protein NapF	
ECOLI02138	Uncharacterized protein yojO	Uncharacterized protein yojO	Uncharacterized protein yojO	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein yojO	conserved predicted protein	Putative uncharacterized protein	
ECOLI02139	Ecotin	Ecotin	Ecotin	Ecotin precursor	Ecotin precursor	Ecotin	Ecotin	Residues 1 to 169 of 169 are 97 pct identical to residues 1 to 169 of a 169 aa protein from Escherichia coli gb: AAA16410.1 ecotin (protease inhibitor)	Ecotin	ecotin, a serine protease inhibitor	similar to Salmonella typhi CT18 ecotin precursor ecotin precursor	Ecotin	possible serine protease inhibitor	LmjF15.0510, predicted protein, len = 159 aa, probably putative ecotin; predicted pI = 9.9461; good similarity to Q8ZGS0, putative ecotin (169 aa, Yersinia pestis, EMBL: AJ414147, CAC90049); Fasta scores: E():8.9e-15, 40.800% identity (42.857% ungapped) in 125 aa overlap, (aa 18-140 of LmjF15.0510, aa 37-157 of Q8ZGS0) ecotin, putative	Ecotin	Ecotin	go_function: serine-type endopeptidase inhibitor activity [goid 0004867]; go_process: regulation of proteolysis and peptidolysis [goid 0030162] ecotin, putative	Ecotin precursor	a serine protease inhibitor; Code: R; COG: COG4574 ecotin	a serine protease inhibitor; Code: R; COG: COG4574 ecotin	Proteinase inhibitor I11, ecotin	proteinase inhibitor I11, ecotin	Proteinase inhibitor I11, ecotin precursor	Ecotin identified by match to protein family HMM PF03974	Ecotin	Proteinase inhibitor I11, ecotin precursor	Putative ecotin precursor	Ecotin	Proteinase inhibitor I11, ecotin precursor	
ECOLI02140	Malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	Malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	identified by match to protein family HMM TIGR01320 malate:quinone-oxidoreductase	Probable malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	Putative oxidoreductase	Probable malate:quinone oxidoreductase	Malate:quinone oxidoreductase	CDS_ID OB0946 malate:quinone oxidoreductase	similar to AX065443-1|CAC25961.1| percent identity: 80 in 500 aa malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase 1	Probable malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	identified by match to protein family HMM TIGR01320 malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase 1	Probable malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	Malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	Mb2877c, mqo, len: 493 aa. Equivalent to Rv2852c, len: 493 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 493 aa overlap). Probable mqo, malate:quinone oxidoreductase (EC 1.1.99.16), highly similar to others e.g. O69282|MQO_CORGL from Corynebacterium glutamicum (Brevibacterium flavum) (499 aa), FASTA scores: opt: 1701, E(): 1.2e-101, (50.7% identity in 495 aa overlap); Q9Z9Q7|BH3960 from Bacillus halodurans (500 aa), FASTA scores: opt: 1632, E(): 3.3e-97, (48.55% identity in 486 aa overlap); Q9HYF4|MQOA|PA3452 from Pseudomonas aeruginosa (523 aa), FASTA scores: opt: 1604, E(): 2.1e-95, (49.1% identity in 487 aa overlap) (N-terminus longer); P33940|MQO_ECOLI|B2210 from Escherichia coli strain K12 (548 aa), FASTA scores: opt: 1525, E(): 2.7e-90, (48.15% identity in 492 aa overlap); etc. BELONGS TO THE MQO FAMILY. COFACTORS: FAD. PROBABLE MALATE:QUINONE OXIDOREDUCTASE MQO (MALATE DEHYDROGENASE [ACCEPTOR])	Probable malate:quinone oxidoreductase	Probable malate:quinone oxidoreductase	hypothetical protein, similar to malate:quinone oxidoreductase	
ECOLI02141	ABC transporter ATP-binding protein yojI	Pyoverdine biosynthesis protein PvdE	Putative ABC transporter	Putative ABC transporter ATP-binding protein	Hypothetical ABC transporter ATP-binding protein yojI	Putative ABC transporter ATP-binding protein	PMID: 8231810 best DB hits: BLAST: swissprot:P33951; SYRD_PSESY ATP-BINDING PROTEIN SYRD -----; E=8e-65 pir:G83345; pyoverdine biosynthesis protein PvdE PA2397 [imported] -; E=8e-65 pir:S54001; pyoverdine synthetase E - Pseudomonas aeruginosa -----; E=9e-64 COG: PA2397; COG1132 ABC-type multidrug/protein/lipid transport system,; E=8e-66 APE1253; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-09 XF1081; COG1132 ABC-type multidrug/protein/lipid transport system,; E=2e-07 PFAM: PF00664; ABC transporter transmembrane; E=0.25 PF00470; RecF protein; E=0.13 PF02223; Thymidylate kinase; E=0.0054 ATP-binding protein syrD-ATP binding protein of ABC-type transporter	Putative ABC transporter ATP-binding protein	Putative ATP-binding component of a transport system	ABC transporter ATPase and permease components	Residues 1 to 547 of 547 are 99 pct identical to residues 1 to 547 of a 547 aa protein from Escherichia coli K12 ref: NP_416715.1 putative ATP-binding component of a transport system	Probable cyclic peptide transporter; abc transporter protein	Similar to ATP-binding component	identified by similarity to SP:P33951; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01194 cyclic peptide ABC transporter, ATP-binding protein/permease	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter putative ABC-type multidrug/protein/lipid transport system, ATPase component	similar to Salmonella typhi CT18 putative ABC transporter ATP-binding protein putative ABC transporter ATP-binding protein	ABC-type multidrug/protein/lipid transport system, ATPase component MdlB protein	Pyoverdine ABC export system, permease/ATP- binding protein	Putative ABC-type multidrug/protein/lipid transport system	identified by match to protein family HMM PF00005; match to protein family HMM PF00664 ABC transporter, ATP-binding/permease protein	identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01194 pyoverdine ABC transporter, ATP-binding/permease protein	identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01194 pyoverdine ABC export system, permease/ATP-binding protein	Cyclic peptide transporter	Code: QP; COG: COG4615 putative ATP-binding component of a transport system	Code: QP; COG: COG4615 putative ATP-binding component of a transport system	Cyclic peptide transporter	Cyclic peptide transporter	Code: QP; COG: COG4615 putative ATP-binding component of a transport system	Cyclic peptide transporter	
ECOLI02142	Alpha-ketoglutarate-dependent dioxygenase alkB	Putative DNA repair protein	Alpha-ketoglutarate-dependent dioxygenase alkB homolog	AlkB protein	Alkylated DNA repair protein alkB	similar to GB:J05175, SP:P16442, PID:1783208, PID:1783212, PID:1783214, PID:1783218, PID:1783226, PID:2352626, PID:340078, and PID:992596; identified by sequence similarity; putative alkylated DNA repair protein AlkB	Alkylated DNA repair protein	Alkylated DNA repair protein	Alkylated DNA repair protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DNA REPAIR SYSTEM SPECIFIC FOR ALKYLATED DNA PROTEIN	DNA alkylation damage repair protein AlkB	Alkylated DNA repair protein	AlkB	DNA repair system specific for alkylated DNA	Probable alkylated DNA repair protein	alkylated DNA repair protein	Alkylated DNA repair protein	SCG20A.20c, probable DNA repair protein, len: 216 aa; similar to SW:ALKB_ECOLI (EMBL:J02607) Escherichia coli DNA repair protein AlkB, 216 aa; fasta scores: opt: 302 z-score: 361.8 E(): 1.1e-12; 34.3% identity in 207 aa overlap putative DNA repair protein	Residues 1 to 216 of 216 are 99 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288792.1 DNA repair system specific for alkylated DNA	Probable alkylated dna repair protein	identified by similarity to SP:P05050; match to protein family HMM PF03171 alkylated DNA repair protein, putative	Alkylated DNA repair protein, AlkB protein	Alkylated DNA repair protein AlkB	DNA repair system specific for alkylated DNA	similar to Salmonella typhi CT18 AlkB protein AlkB protein	similar to BRA0533, alkylated DNA repair protein AlkB AlkB, alkylated DNA repair protein	Alkylated DNA repair protein AlkB	Alkylated DNA repair protein	Alpha-ketoglutarate-dependent dioxygenase alkB	
ECOLI02143	Regulatory protein ada	O6-methylguanine-DNA methyltransferase	ADA regulatory protein	O6-methylguanine-DNA methyltransferase	ADA Regulatory protein	identified by match to PFAM protein family HMM PF00165 ada regulatory protein	O6-methylguanine-DNA methyltransferase	ADA regulatory protein	Ada regulatory protein	O6-methylguanine-DNA methyltransferase	PUTATIVE TRANSCRIPTION REGULATOR	ADA regulatory protein	ADA REGULATORY PROTEIN , O-6-METHYLGUANINE-DNA- ALKYLTRANSFERASE	O6-methylguanine-DNA methyltransferase; transcription activator/repressor	O6-methylguanine-DNA methyltransferase	Residues 1 to 354 of 354 are 99 pct identical to residues 1 to 354 of a 354 aa protein from Escherichia coli gb: AAA23413.1 Ada polyprotein	Bifunctional regulatory protein/DNA repair protein	Probable ada regulatory of adaptative response contains: methylated-dna--protein-cysteine methyltransferase ec 2.1.1.63 o-6-methylguanine-dna transcription regulator	bifunctional; IPR000005: Helix-turn-helix, AraC type; IPR001497: Methylated-DNA-[protein]-cysteine S-methyltransferase;protein,; IPR004026: Metal binding domain of Ada;IPR008332: Methylguanine DNA methyltransferase, ribonuclease-like;protein O6-methylguanine-DNA methyltransferase; transcription activator/repressor (AraC/Xyl family)	similar to Salmonella typhi CT18 ADA regulatory protein ADA regulatory protein	similar to BR0368, ada regulatory protein Ada, ada regulatory protein	Bifunctional regulatory protein/DNA repair protein	Adaptive response regulator protein	Regulatory protein ada	identified by match to protein family HMM PF00165; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM TIGR00589 ADA regulatory protein	identified by similarity to SP:P06134; match to protein family HMM PF00165; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM TIGR00589 ADA regulatory protein	Methylated-DNA-[protein]-cysteine S-methyltransferase	transcription activator/repressor; Code: F; COG: COG2169 O6-methylguanine-DNA methyltransferase	Helix-turn-helix, AraC type:Methylated-DNA-[protein]-cysteine S-methyltransferase:Metal binding domain of Ada	
ECOLI02144	Thiamine biosynthesis lipoprotein apbE	Thiamine biosynthesis lipoprotein ApbE	similar to SP:P41780; identified by sequence similarity; putative thiamine biosynthesis lipoprotein, putative	Thiamine biosynthesis lipoprotein apbE	Putative uncharacterized protein	Thiamine biosynthesis protein ApbE, putative	Putative uncharacterized protein	Thiamine biosynthesis protein	Thiamine biosynthesis lipoprotein ApbE	Putative thiamine biosynthesis lipoprotein	Thiamine biosynthesis lipoprotein apbE	Thiamine biosynthesis lipoprotein apbE	similar to SP:P41780; identified by sequence similarity; putative ApbE family protein	Thiamine biosynthesis lipoprotein	Thiamine biosynthesis lipoprotein	Thiamine biosynthesis protein	Thiamine biosynthesis lipoprotein	Putative thiamine biosynthesis protein apbE	Thiamine biosynthesis lipoprotein, putative	pseudo	Thiamine biosynthesis lipoprotein ApbE	ApbE family protein	THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE	Thiamine biosynthesis lipoprotein apbE	Putative Thiamine biosynthesis lipoprotein apbE	Residues 1 to 351 of 351 are 99 pct identical to residues 1 to 351 of a 351 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288794.1 orf, conserved hypothetical protein	Thiamine biosynthesis lipoprotein apbE	ApbE family	identified by similarity to SP:P41780; match to protein family HMM PF02424 thiamin biosynthesis lipoprotein ApbE	
ECOLI02145	Outer membrane protein C	Outer membrane protein C	Outer membrane protein C precursor	Outer membrane protein C	Residues 1 to 373 of 373 are 96 pct identical to residues 1 to 367 of a 367 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288795.1 outer membrane protein 1b (Ib;c)	Outer membrane protein C, porin	IPR000504: RNA-binding region RNP-1 (RNA recognition motif); IPR001702: Porin, Gram-negative type; IPR001897: Porin, bacterial type outer membrane protein 1b (ib;c), porin	similar to Salmonella typhi CT18 outer membrane protein C outer membrane protein C	Outer membrane protein C, porin	Outer membrane protein C	Code: M; COG: COG3203 outer membrane protein 1b (Ib;c)	Code: M; COG: COG3203 outer membrane protein 1b (Ib;c)	Ib;c; Code: M; COG: COG3203 outer membrane protein 1b	Outer membrane protein C	Outer membrane protein C, porin precursor	Outer membrane protein 1b	Outer membrane protein C, porin precursor	Outer membrane protein C, porin precursor	outer membrane protein 1b Code: M; COG: COG3203	Outer membrane protein C, porin precursor	outer membrane porin protein C OmpC	outer membrane porin, putative KEGG: son:SO1821 outer membrane porin, putative	Porin, Gram-negative type precursor	KEGG: sbl:Sbal_1631 porin, gram-negative type porin, gram-negative type	Outer membrane pore protein 1b	Putative uncharacterized protein	Outer membrane protein C	Porin Gram-negative type precursor	Outer membrane porin protein C	
ECOLI02146	Sensor-like histidine kinase yojN	Putative sensor-like histidine kinase yojN	Putative two-component system sensor kinase	Putative 2-component sensor protein	Residues 1 to 890 of 890 are 99 pct identical to residues 1 to 890 of a 890 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288796.1 putative 2-component sensor protein	pseudo	Complete genome; segment 11/17	IPR005467: Histidine kinase; IPR008207: Hpt putative sensor/kinase in regulatory system	similar to Salmonella typhi CT18 putative two-component system sensor kinase putative two-component system sensor kinase	Sensor protein	Putative sensor/kinase in regulatory system	Code: T; COG: COG0642 putative 2-component sensor protein	Code: T; COG: COG0642 putative 2-component sensor protein	putative two-component sensor protein	Code: T; COG: COG0642 putative 2-component sensor protein	Putative sensor-like histidine kinase YojN	Hypothetical protein precursor	Putative sensor-like histidine kinase YojN	Hypothetical protein precursor	Putative two component sensor kinase precursor	putative 2-component sensor protein Code: T; COG: COG0642	Hypothetical protein precursor	putative sensor-like histidine kinase YojN	Multi-sensor signal transduction histidine kinase precursor	Putative 2-component sensor protein	Sensor histidine kinase YojN	Multi-sensor signal transduction histidine kinase precursor	Phosphotransfer intermediate protein in two- component regulatory system with RcsBC	Sensor protein	
ECOLI02147	Capsular synthesis regulator component B	Capsular synthesis regulator component B	Capsular synthesis regulator component B	Two-component response regulator	Capsular synthesis regulator component B	Residues 16 to 231 of 231 are 100 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli O157:H7 ref: NP_311133.1 positive response regulator for colanic capsule biosynthesis	Probable two component response regulator component B	Capsular synthesis regulator component B	IPR000792: Bacterial regulatory protein, LuxR family; IPR001789: Response regulator receiver response regulator (positive) in two-component regulatory system with RcsC (LuxR/UhpA familiy)	similar to Salmonella typhi CT18 regulator of capsule synthesis B component regulator of capsule synthesis B component	Capsule synthesis two component response regulator component B	Capsular synthesis regulator component B	identified by similarity to SP:P14374; match to protein family HMM PF00072; match to protein family HMM PF00196 DNA-binding response regulator, LuxR family	sensor RcsC; Code: TK; COG: COG2197 positive response regulator for colanic capsule biosynthesis	sensor, RcsC; Code: TK; COG: COG2197 positive response regulator for colanic capsule biosynthesis	putative two-component response regulator of capsular synthesis	capsular synthesis regulator component B	sensor, RcsC; Code: TK; COG: COG2197 positive response regulator for colanic capsule biosynthesis	Capsular synthesis regulator component B	Two component response regulator component B	Positive response regulator for colanic capsule biosynthesis	two component transcriptional regulator, LuxR family PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein KEGG: bur:Bcep18194_B2880 two component transcriptional regulator, LuxR family	Two component response regulator component B	Two component transcriptional regulator, LuxR family	DNA-binding response regulator identified by match to protein family HMM PF00072; match to protein family HMM PF00196	Probable two component response regulator component B	positive response regulator for colanic capsule biosynthesis Code: TK; COG: COG2197	response regulator, NarL-family REC (residues 4 to 121, 3e-14) with a complete phosphorylation pocket (DD-D60-T80-K101)	Two component response regulator component B	
ECOLI02148	Sensor kinase protein rcsC	Sensor protein	Sensor protein rcsC	Sensor protein	Sensor protein	Residues 1 to 929 of 929 are 99 pct identical to residues 5 to 933 of a 933 aa protein from Escherichia coli K12 ref: NP_416722.1 sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB	Sensor protein	Sensor protein	IPR001789: Response regulator receiver; IPR004358: Bacterial sensor protein, C-terminal; IPR005467: Histidine kinase sensory histidine kinase in two-component regulatory system with RcsB, regulates colanic capsule biosynthesis	similar to Salmonella typhi CT18 sensor protein RcsC sensor protein RcsC	Sensor protein	Sensor protein rcsC	identified by similarity to SP:P14376; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518 sensor histidine kinase/response regulator	probable histidine kinase acting on RcsB; Code: T; COG: COG0642 sensor for ctr capsule biosynthesis	probable histidine kinase acting on RcsB; Code: T; COG: COG0642 sensor for ctr capsule biosynthesis	capsular synthesis sensor protein RcsC	Periplasmic Sensor Hybrid Histidine Kinase	probable histidine kinase acting on RcsB; Code: T; COG: COG0642 sensor for ctr capsule biosynthesis	Sensor protein	Two component sensor kinase/response regulator protein RcsC precursor	Sensor protein	Two component sensor kinase/response regulator protein RcsC precursor	Two component sensor kinase/response regulator protein RcsC precursor	kinase sensor protein	Sensor protein rcsC Code: T; COG: COG0642	Two component sensor kinase/response regulator protein RcsC	hybrid sensory kinase in two-component regulatory system with RcsB and RojN	Sensor histidine kinase/response regulator	Sensor protein	
ECOLI02149	Signal transduction histidine-protein kinase atoS	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Two-component hybrid sensor and regulator	Sensor protein	Two-component system sensor histidine kinase	Sensor protein atoS	Sensor histidine kinase	nitrogen regulation protein ntrY	Sensor protein	Sensor protein	Sensor protein	Sensor protein kinase walK	identified by similarity to OMNI:SA0020; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229 sensory box histidine kinase YycG	identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518 sensory box histidine kinase/response regulator	Two-component sensor histidine kinase	Sensor protein	two-component sensor histidine kinase	Ortholog of S. aureus MRSA252 (BX571856) SAR0019 sensor kinase protein	two-component sensor histidine kinase	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229 sensory box histidine kinase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator sensor protein	C-terminus is similar to the C-terminus of Escherichia coli sensor protein ZraS or HydH or B4003 SWALL:ZRAS_ECOLI (SWALL:P14377) (465 aa) fasta scores: E(): 5.1e-10, 25.08% id in 295 aa, and to Bacteroides thetaiotaomicron two-component system sensor histidine kinase BT1528 SWALL:AAO76635 (EMBL:AE016932) (430 aa) fasta scores: E(): 3.3e-129, 79.06% id in 430 aa. This CDS overlaps 6 nt with the adjacent divergently transcribed CDS putative two component sensor histidine kinase protein	Sensor protein	Signal transduction histidine kinase (contains HAMP domain)	identified by similarity to GP:29338160; match to protein family HMM PF00512; match to protein family HMM PF02518 sensor histidine kinase	signal transduction two-component sensor histidine kinase, VicK	
ECOLI02150	Acetoacetate metabolism regulatory protein atoC	Response regulatory protein	Acetoacetate metabolism Regulatory protein atoC	Transcriptional regulatory protein	PMID: 9278503 PMID: 9097040 PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=6e-93 pir:F71315; probable response regulatory protein (atoC) - syphilis; E=7e-93 gb:AAF33506.1; (AF170176) Salmonella typhimurium transcriptional; E=3e-89 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=5e-94 PFAM: PF00072; Response regulator receiver doma; E=1.5e-34 PF00158; Sigma-54 interaction domain; E=1.2e-133 acetoacetate metabolism regulatory protein atoC	Sigma-54 dependent transcriptional regulator/response regulator FleR	Lateral flagellar regulatory protein	Probable two-component response regulator	Transcriptional regulator	conserved gene sigma 54-dependent response regulator	similar to two-component response regulator hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pr : putative regulator putative sigma-54 dependent transcriptional regulator	Similar to: HI0410, TYRR_HAEIN transcriptional regulatory protein TyrR	identified by similarity to GP:2352978; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199 flagellar regulatory protein C	sensor ATOS; ornithine decarboxylase antizyme; Code: T; COG: COG2204 response regulator of ato	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 11525977, 15090493; Product type r : regulator putative Sigma-54 dependent response regulator; regulation of polar flagellae expression	Possible Transcriptional Regulator, Fis family	two component, sigma54 specific, transcriptional regulator, Fis family	transcription regulator FleQ (sigma 54-dependent transcriptional activator)	two component transcriptional regulator, Fis family	two component, sigma54 specific, transcriptional regulator, Fis family	Acetoacetate metabolism regulatory protein AtoC	Two component, sigma54 specific, transcriptional regulator, Fis family	Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	Two component, sigma54 specific, transcriptional regulator, Fis family protein	Sigma54 specific transcriptional regulator, Fis family	Acetoacetate metabolism regulatory protein AtoC	sigma54 specific transcriptional regulator, Fis family PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type SMART: AAA ATPase KEGG: cte:CT1497 sigma-54-dependent transcriptional regulator	two component, sigma54 specific, transcriptional regulator, Fis family PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5 SMART: AAA ATPase KEGG: sat:SYN_01466 sigma-54 dependent transcriptional regulator	
ECOLI02151	Acetate CoA-transferase subunit alpha	Acetate CoA-transferase subunit alpha	Acetate CoA-transferase, subunit A	Putative 3-keto-6-acetamidohexanoate cleavage enzyme	Aetate CoA-transferase, alpha subunit	Acetate CoA-transferase alpha subunit	identified by match to protein family HMM PF01144 acetate CoA-transferase, subunit A	3-oxoadipate CoA-transferase subunit A	Acetate CoA-transferase alpha subunit	Butyrate-acetoacetate CoA-transferase, subunit A	CDS_ID OB2634 butyrate-acetoacetate CoA-transferase small chain	Butyrate--acetoacetate CoA-transferase subunit A	3-oxoadipate CoA-transferase	Acetate CoA-transferase alpha subunit	Acetyl-CoA:acetoacetate CoA transferase alpha subunit; Similar to: HI0774, ATOD_HAEIN acetate CoA-transferase alpha subunit	aetate CoA-transferase, alpha subunit	Code: I; COG: COG1788 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit	Acetate CoA-transferase	3-oxoacid CoA-transferase, subunit A	Acetate CoA-transferase alpha subunit	butyrate--acetoacetate CoA-transferase subunit A	acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit	aetate CoA-transferase, alpha subunit	Acetate CoA-transferase alpha subunit	3-oxoacid CoA-transferase, A subunit	3-oxoacid CoA-transferase, A subunit	3-oxoacid CoA-transferase, A subunit	3-oxoacid CoA-transferase, A subunit	3-oxoacid CoA-transferase, A subunit	
ECOLI02152	Acetate CoA-transferase subunit beta	Acetate CoA-transferase subunit beta	pseudo	3-oxoacid CoA-transferase subunit B	Acetate CoA-transferase beta subunit	3-oxoadipate CoA-transferase subunit B	Acetate CoA-transferase beta subunit	3-oxoacid CoA-transferase, subunit B family	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B	Coenzyme A transferase, beta subunit	Putative Acetyl-CoA:acetoacetyl-CoA transferase b subunit	CDS_ID OB2633 butyate-acetoacetate CA-transferase large chain	Butyrate--acetoacetate CoA-transferase subunit B	Acyl-CoA:acetate CoA transferase beta subunit	Acetate CoA-transferase beta subunit	Acetate CoA-transferase beta subunit	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B	Acetate CoA-transferase beta subunit	best blastp match gb|AAK34407.1| (AE006595) putative Acetyl-CoA:acetoacetyl-CoA transferase b subunit [Streptococcus pyogenes M1 GAS] putative Acetyl-CoA:acetoacetyl-CoA transferase b subunit	Acetyl-CoA:acetoacetate CoA transferase beta subunit; Similar to: HI0773, ATOA_HAEIN acetate CoA-transferase beta subunit	CoA-transferase, subunit B, putative	Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B	identified by similarity to GP:4007785; match to protein family HMM PF01144; match to protein family HMM TIGR02428 3-oxoadipate CoA-succinyl transferase, beta subunit	3-oxoacid CoA-transferase	acetate CoA-transferase beta subunit	Code: I; COG: COG2057 acetyl-CoA:acetoacetyl-CoA transferase beta subunit	similar to gi|56965782|ref|YP_177516.1| [Bacillus clausii KSM-K16], percent identity 70 in 212 aa, BLASTP E(): 2e-78 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B	3-oxoacid CoA-transferase, subunit B	Acetate CoA-transferase beta subunit	
ECOLI02153	Short-chain fatty acids transporter	Hypothetical protein	Putative uncharacterized protein	Short-chain fatty acids transporter	Putative membrane protein	Short-chain fatty acids transporter	Short-chain fatty acids transporter	Short-chain fatty acids transporter	short chain fatty acids transporter	identified by match to protein family HMM PF02667 membrane protein, putative	Putative short-chain fatty acids transporter	Putative short-chain fatty acids transporter	Putative uncharacterized protein	Putative short-chain fatty acids transporter	Conserved hypothetical integral membrane protein	CDS_ID OB2549 short-chain fatty acids transporter	Short-chain fatty acids transporter	short-chain fatty acids transporter	Short-chain fatty acids transporter	Similar to: HI0772, ATOE_HAEIN short-chain fatty acids transporter	short-chain fatty acids transporter	Code: I; COG: COG2031 short chain fatty acid transporter	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative short-chain fatty acid transport protein (scFAT family)	short chain fatty acid transporter	conserved hypothetical protein	Short-chain fatty acids transporter	short chain fatty acid transporter	conserved hypothetical protein	short-chain fatty acids transporter	
ECOLI02154	Acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	Lmo1414 protein	Acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	predicted by Codon_usage predicted by Homology predicted by FrameD ACETYL-COA ACETYLTRANSFERASE PROTEIN	Acetyl-coA acetyltransferase	Acetyl coenzyme A acetyltransferase	CDS_ID OB2632; acetoacetyl-CoA thiolase acetyl-CoA acetyltransferase	Acetyl coenzyme A acetyltransferase	Thiolase	Acetyl-CoA acetyltransferases	Probable acetyl-CoA acyltransferase	Probable acetyl-coa acetyltransferase (Acetoacetyl-coa thiolase) protein	acetyl-CoA C-acetyltransferase homologue	acetoacetyl-CoA thiolase; Similar to: HI0771, ATOB_HAEIN acetyl-CoA acetyltransferase	identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 acetyl-CoA acetyltransferase	Similar to Clostridium acetobutylicum acetyl-CoA acetyltransferase Thl SW:THL_CLOAB (P45359) (392 aa) fasta scores: E(): 5e-81, 57.653% id in 392 aa, and to Clostridium thermosaccharolyticum acetyl coenzyme A acetyltransferase ThlA TR:P77852 (EMBL:Z82038) (392 aa) fasta scores: E(): 1.1e-82, 58.929% id in 392 aa acetyl-CoA acetyltransferase	thiolase	Code: I; COG: COG0183 acetyl-CoA acetyltransferase	identified by similarity to EGAD:16007; match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 acetyl-CoA acetyltransferase	acetyl-Coenzyme A acetyltransferase 2 [Source:HGNC Symbol;Acc:94]	probable acetyl-CoA acetyltransferase protein	Acetyl-CoA C-acetyltransferase	transcript_id=ENSDNOT00000002503	
ECOLI02155	Uncharacterized protein yfaP	Hypothetical protein yfaP	Putative uncharacterized protein	Residues 1 to 258 of 258 are 100 pct identical to residues 1 to 258 of a 258 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288799.1 orf, conserved hypothetical protein	Probable signal peptide protein	identified by similarity to PIR:D83085 conserved hypothetical protein	Code: S; COG: COG4676 conserved hypothetical protein	Code: S; COG: COG4676 conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfaP	conserved hypothetical secreted protein Conserved hypothetical secreted protein Homology to pa4487 of P. aeruginosa of 52% (trembl|Q9HVT4(SRS)) no domains predicted signal peptide no TMHs Conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein Code: S; COG: COG4676	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative signal peptide protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfaP	Putative uncharacterized protein	
ECOLI02156	Uncharacterized protein yfaQ	Hypothetical protein yfaQ	Residues 1 to 549 of 549 are 99 pct identical to residues 1 to 549 of a 549 aa protein from Escherichia coli K12 ref: NP_416730.1 orf, conserved hypothetical protein	Hypothetical signal peptide protein	identified by similarity to SP:P76463 conserved hypothetical protein	Code: S; COG: COG5445 conserved hypothetical protein	Code: S; COG: COG5445 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG5445; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfaQ	conserved hypothetical secreted protein Conserved hypothetical secreted protein. Homology to PA4488 of P. aeruginosa of 47% (trembl|Q9HVT3(SRS)) No domains predicted. No TMHs. Singal Peptide Present. Conserved hypothetical protein	Signal peptide protein	conserved hypothetical protein	conserved hypothetical protein Code: S; COG: COG5445	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Signal peptide protein precursor	Putative signal peptide protein	Putative uncharacterized protein	Putative uncharacterized protein yfaQ	Putative uncharacterized protein	Putative uncharacterized protein yfaQ	


ECOLI02157	Uncharacterized protein yfaT	Hypothetical protein yfaT	Putative uncharacterized protein	Residues 1 to 216 of 216 are 98 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli O157:H7 ref: NP_311139.1 orf, conserved hypothetical protein	Putative uncharacterized protein	identified by match to protein family HMM PF06672 conserved hypothetical protein	Protein of unknown function DUF1175	Code: S; COG: COG3234; orf conserved hypothetical protein	protein of unknown function DUF1175	Putative uncharacterized protein	Putative uncharacterized protein yfaT	conserved hypothetical secreted protein Conserved hypothetical secreted protein. Homology to RS04726 of R. solanacearum of 55% (trembl|Q8XV01(SRS)) Has PF06672;(IPR009558)Protein of unknown function (DUF1175):This family consists of several hypothetical bacterial proteins of around 210 residues in length. The function of this family is unknown. No TMHs signal peptide present. Conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein Code: S; COG: COG3234	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfaT	
ECOLI02158	Uncharacterized protein yfaA	Hypothetical protein yfaA	Putative uncharacterized protein yfaA	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1788561 (579 aa). BLAST with identity of 98% in 578 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Probable transmembrane protein	conserved hypothetical protein	Code: S; COG: COG4685 conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfaA	conserved hypothetical secreted protein Conserved hypothetical secreted protein. Homology to RS04725 of Ralstonia solanacearum of 43% (trembl|Q8XV00(SRS)) No domains predicted. Signal Peptide Present. NO TMH reported present. Conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein Code: S; COG: COG4685	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfaA	Putative uncharacterized protein	Putative uncharacterized protein yfaA	
ECOLI02159	DNA gyrase subunit A	DNA gyrase subunit A	DNA gyrase, subunit A	DNA gyrase, A subunit	DNA gyrase subunit A	DNA topoisomerase (ATP-hydrolyzing), subunit A	DNA gyrase subunit A	DNA gyrase subunit A	DNA gyrase, subunit A	DNA gyrase subunit A	DNA gyrase subunit A	DNA gyrase subunit A	DNA gyrase subunit A	DNA gyrase subunit a	similar to GB:M81439,  and PID:143969; identified by sequence similarity; putative DNA gyrase, subunit A	DNA gyrase subunit A	DNA gyrase subunit A	Putative DNA gyrase subunit A	DNA gyrase subunit A	DNA gyrase A subunit	DNA gyrase, subunit A (GyrA) related protein	DNA gyrase subunit A	DNA gyrase/topoisomerase IV, subunit A	DNA gyrase subunit A	DNA gyrase A subunit	DNA gyrase subunit A	DNA gyrase subunit A	DNA gyrase subunit A	GyrA	
ECOLI02160	3-demethylubiquinone-9 3-methyltransferase	O-methyltransferase, catalyzes two different O- methylation steps in ubiquinone (Coenzyme Q) biosynthesis; component of a mitochondrial ubiquinone-synthesizing complex; phosphoprotein. [Source:SGD;Acc:S000005456]	Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC162.05]	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	similar to uniprot|P27680 Saccharomyces cerevisiae YOL096c COQ3 enzyme of ubiquinone biosynthesis;	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	putative 3-demethylubiquinone-9 3-methyltransferase (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase)	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	go_component: mitochondrion [goid 0005739]; go_component: mitochondrial inner membrane [goid 0005743]; go_component: extrinsic to membrane [goid 0019898]; go_function: hexaprenyldihydroxybenzoate methyltransferase activity [goid 0004395]; go_process: ubiquinone metabolism [goid 0006743]; go_process: ubiquinone biosynthesis [goid 0006744] hexaprenyldihydroxybenzoate methyltransferase, putative	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	3-demethylubiquinone-9 3-methyltransferase	
ECOLI02161	Uncharacterized protein yfaL	Hypothetical protein yfaL	similar to GP:15162141, and GP:15162141; identified by sequence similarity; putative outer membrane autotransporter	Autotransporter	Putative ATP-binding component of a transport system	similar to Escherichia coli K12 putative ATP-binding component of a transport system gi: 1788565 (1251 aa). BLAST with identity of 96% in 1688 aa. This CDS has been disrupted by insertion. The sequence has been checked and is believed to be correct. pseudo	Putative uncharacterized protein	Outer membrane autotransporter barrel	VCBS	Code: MU; COG: COG3468 putative ATP-binding component of a transport system	Putative uncharacterized protein	Hypothetical protein	Outer membrane autotransporter barrel	Putative uncharacterized protein yfaL	Hypothetical protein	Hypothetical protein	outer membrane autotransporter barrel domain TIGRFAM: outer membrane autotransporter barrel domain autotransporter-associated beta strand repeat protein PFAM: Pertactin Autotransporter beta-domain KEGG: bmb:BruAb2_1085 outer membrane autotransporter	putative exoprotein involved in heme utilization or adhesion	Outermembrane transporter	Putative outer membrane protein, contains Hep_Hag repeats	Outer membrane autotransporter barrel domain protein precursor	Putative outer membrane autotransporter adhesin	Adhesin	Putative outer membrane autotransporter adhesin	Outer membrane autotransporter barrel domain protein	Outer membrane autotransporter barrel domain protein	putative autotransporter hypothetical protein with predicted signal peptide,10 parallel beta-helix repeats, and an outer membrane autotransporter barrel (TIGR01414),InterPro; Outer membrane autotransporter barrel hypothetical protein	Outer membrane autotransporter barrel domain protein	Outer membrane autotransporter barrel domain protein	
ECOLI02163	Ribonucleoside-diphosphate reductase 1 subunit alpha	ribonucleoside-diphosphate reductase large chain;	Ribonucleoside-diphosphate reductase large chain [Source:GeneDB_Spombe;Acc:SPAC1F7.05]	highly similar to sp|P21524 Saccharomyces cerevisiae YER070w RNR1 ribonucleoside-diphosphate reductase, large subunit, start by similarity	Ribonucleoside-diphosphate reductase	ribonucleoside-diphosphate reductase, large subunit	RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE;10_0920, RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE, LARGE CHAIN, RIR1_CAEEL, gene found by Glimmer;	Ribonucleoside-diphosphate reductase subunit alpha	highly similar to uniprot|P21524 Saccharomyces cerevisiae YER070w RNR1 or uniprot|P21672 Saccharomyces cerevisiae YIL066c RNR3;	DEHA2G05610p;highly similar to uniprot|P21524 Saccharomyces cerevisiae YER070W RNR1 Ribonucleotide-diphosphate reductase (RNR);	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase subunit alpha	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	putative ribonucleoside-diphosphate reductase, alpha subunit	Ribonucleoside-diphosphate reductase subunit alpha	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase 1 alpha chain	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	go_component: cytoplasm [goid 0005737]; go_function: ribonucleoside-diphosphate reductase activity [goid 0004748]; go_process: DNA replication [goid 0006260] ribonucleoside-diphosphate reductase large chain, putative	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	
ECOLI02164	Ribonucleoside-diphosphate reductase 1 subunit beta	Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits. [Source:SGD;Acc:S000003563]	highly similar to tr|Q9HEW8 Emericella nidulans Ribonucleotide reductase, start by similarity	Ribonucleoside-diphosphate reductase beta subunit	Ribonucleoside-diphosphate reductase small chain [Source:GeneDB_Spombe;Acc:SPBC25D12.04]	highly similar to sp|P09938 Saccharomyces cerevisiae YJL026w RNR2 ribonucleoside-diphosphate reductase, small subunit, start by similarity	Ribonucleoside-diphosphate reductase beta chain	ribonucleotide reductase small subunit	Ribonucleoside-diphosphate reductase subunit beta	highly similar to uniprot|P09938 Saccharomyces cerevisiae YJL026w RNR2 ribonucleoside-diphosphate reductase or uniprot|P49723 Saccharomyces cerevisiae YGR180c RNR4;	Ribonucleoside reductase small chain	DEHA2G04268p;similar to uniprot|P09938 Saccharomyces cerevisiae YJL026w RNR2 ribonucleoside-diphosphate reductase;	similar to SP:P00262; identified by sequence similarity; putative ribonucleoside-diphosphate reductase, beta subunit	Putative ribonucleoside-diphosphate reductase beta chain	Ribonucleoside-diphosphate reductase beta subunit	Ribonucleoside-diphosphate reductase, beta subunit	Ribonucleoside-diphosphate reductase beta chain	Ribonucleoside-diphosphate reductase, beta subunit	NrdB	NrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase	Ribonucleoside-diphosphate reductase beta chain	Ribonucleotide reductase, beta subunit	Ribonucleoside-diphosphate reductase 1 beta chain	Lmo2154 protein	Ribonucleoside-diphosphate reductase subunit B	Ribonucleoside-diphosphate reductase beta chain	Ribonucleoside-diphosphate reductase, beta subunit	putative ribonucleoside-diphosphate reductase, beta subunit	Ribonucleoside-diphosphate reductase subunit beta	
ECOLI02165	Uncharacterized ferredoxin-like protein yfaE	Putative ferredoxin	Putative uncharacterized protein	Ferredoxin	Putative ferredoxin	Hypothetical iron-sulfur cluster-binding protein	Hypothetical ferredoxin-like protein yfaE	Iron-sulfur cluster-binding protein, putative	Putative ferredoxin	Putative iron-sulfur cluster-binding protein	Putative uncharacterized protein yfaE	Uncharacterized ferredoxin-like protein BU177	Ferredoxin	Residues 1 to 84 of 84 are 100 pct identical to residues 1 to 84 of a 84 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288810.1 orf, conserved hypothetical protein	Putative iron-sulphur binding protein	Similar to ferredoxin-like protein YfaE of Escherichia coli	IPR006058: 2Fe-2S ferredoxin, iron-sulfur binding site putative ferredoxin	similar to Salmonella typhi CT18 putative ferredoxin putative ferredoxin	Putative iron-sulphur binding protein	Putative iron-sulphur binding protein	ferredoxin	Similar to: HI1309, YFAE_HAEIN conserved hypothetical ferredoxin-like protein	Ferredoxin Fdx protein	Iron-sulfur cluster-binding protein	Uncharacterized ferredoxin-like protein bbp_166	Putative ferredoxin	conserved hypothetical protein	Code: C; COG: COG0633 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy putative ferredoxin	
ECOLI02166	Protein inaA	Protein inaA	InaA protein	pH-inducible protein involved in stress response	Residues 1 to 216 of 216 are 98 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli K12 ref: NP_416740.1 pH-inducible protein involved in stress response	InaA protein	identified by match to protein family HMM PF06293 inaA protein	identified by similarity to SP:P27294; match to protein family HMM PF06293 inaA protein	Lipopolysaccharide kinase	involved in stress response pH-inducible protein	pH-inducible stress response protein	Protein InaA	InaA protein	lipopolysaccharide kinase	Protein InaA	conserved hypothetical InaA protein Conserved hypothetical InaA protein. Homology to inaA of P. putida of 39% (gnl|keqq|ppu:PP0904(KEGG)). Pfam: Lipopolysaccharide kinase (Kdo/WaaP) family. These lipopolysaccharide kinases are related to protein kinases Pkinase. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of S. enterica. No signal peptide. No TMHs Conserved hypothetical protein	InaA protein	putative Lipopolysaccharide kinase InaA Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	pH-inducible protein involved in stress response	pH-inducible protein involved in stress response	Lipopolysaccharide kinase precursor	Protein InaA	InaA protein	Putative uncharacterized protein	lipopolysaccharide kinase PFAM: lipopolysaccharide kinase KEGG: pen:PSEEN4455 lipopolysaccharide kinase InaA	Lipopolysaccharide kinase precursor	Conserved protein	Putative lipopolysaccharide kinase InaA	Lipopolysaccharide kinase	
ECOLI02167	Putative uncharacterized protein yfaH	Code: K; COG: COG0583 conserved hypothetical protein	Conserved domain protein	Conserved protein	Conserved domain protein	Putative uncharacterized protein	Conserved domain protein	Putative uncharacterized protein	Putative uncharacterized protein yfaH	Putative uncharacterized protein yfaH	YfaH protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI02168	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Putative glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	GlpQ	Glycerophosphoryl diester phosphodiesterase, periplasmic	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase periplasmic	Glycerophosphoryl diester phosphodiesterase	Related to glycerophosphoryl diester phosphodiesterase	Putative hydrolase	putative glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase, periplasmic	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase, periplasmic	Glycerophosphoryl diester phosphodiesterase family protein	Glycerophosphoryl diester phosphodiesterase	Glycerophosphodiester phosphodiesterase, periplasmic	CDS_ID OB2833 glycerophosphodiester phosphodiesterase	SCL24.01c, probable glycerophosphoryl diester phosphodiesterase (fragment), len: >291 aa; similar to SW:GLPQ_ECOLI (EMBL:X56907) Escherichia coli glycerophosphoryl diester phosphodiesterase, periplasmic precursor (EC 3.1.4.46) GlpQ, 358 aa; fasta scores: opt: 321 z-score: 336.9 E(): 2.4e-11; 35.1% identity in 228 aa overlap. Contains possible N-terminal region signal peptide sequence SCL11.21c, probable glycerophophosdyl diester phosphodiesterase (fragment), len: >133 aa; similar to SW:GLPQ_ECOLI (EMBL:X56907) Escherichia coli glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) GlpQ, 358 aa; fasta scores: opt: 146 z-score: 185.0 E(): 0.0069; 34.3% identity in 102 aa overlap putative glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Residues 20 to 377 of 377 are 99 pct identical to residues 1 to 358 of a 358 aa protein from Escherichia coli K12 ref: NP_416742.1 glycerophosphodiester phosphodiesterase, periplasmic	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Putative glycerophosphoryl diester phosphodiesterase, periplasmic protein	Glycerophosphoryl diester phosphodiesterase, periplasmic	
ECOLI02169	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	GlpT	Glycerol-3-phosphate transporter	Sugar phosphate permease	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	putative glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	identified by match to protein family HMM TIGR00712; match to protein family HMM TIGR00881 glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	sn-glycerol-3-phosphate permease	hypothetical protein	Transporter, MFS superfamily	Sugar phosphate permease	GLYCEROL-3-PHOSPHATE TRANSPORTER	Glycerol-3-phosphate Pi antiporter	Residues 1 to 452 of 452 are 99 pct identical to residues 1 to 452 of a 452 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288816.1 sn-glycerol-3-phosphate permease	Glycerol-3-phosphate transporter	Glycerol-3-phosphate transporter	identified by similarity to EGAD:8163; match to protein family HMM PF00083; match to protein family HMM TIGR00712; match to protein family HMM TIGR00881 glycerol-3-phosphate transporter	
ECOLI02170	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	Glycerol-3-phosphate dehydrogenase chain A	Anaerobic glycerol-3-phosphate dehydrogenase subunit alpha	Glycerol-3-phosphate dehydrogenase related protein	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	GlpA	Glycerol-3-phosphate dehydrogenase	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	Putative anaerobic glycerol-3-phosphate dehydrogenase, subunit A	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	Anaerobic glycerol-3-phosphate dehydrogenase, subunit A	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	Glycerol-3-phosphate dehydrogenase	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	Oxidoreductase, FAD-dependent	Glycerol-3-phosphate dehydrogenase	Residues 3 to 544 of 544 are 100 pct identical to residues 1 to 542 of a 542 aa protein from Escherichia coli O157:H7 ref: NP_311153.1 anaerobic sn-glycerol-3-phosphate dehydrogenase large subunit	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	glycerol-3-phosphate dehydrogenase	IPR000205: NAD-binding site; IPR000447: FAD-dependent glycerol-3-phosphate dehydrogenase sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit	similar to Salmonella typhi CT18 anaerobic glycerol-3-phosphate dehydrogenase subunit A anaerobic glycerol-3-phosphate dehydrogenase subunit A	Anaerobic glycerol-3-phosphate dehydrogenase subunit A	anaerobic glycerol-3-phosphate dehydrogenase subunit A	G-3-P dehydrogenase; Similar to: HI0685, GLPA_HAEIN anaerobic glycerol-3-phosphate dehydrogenase subunit A	Glycerol-3-phosphate dehydrogenase GlpA protein	sn-glycerol-3-phosphate dehydrogenase (Anaerobic), large subunit	anaerobic glycerol-3-phosphate dehydrogenase, subunit A	
ECOLI02171	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	Probable anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	hypothetical anaerobic glycerol-3-phosphatedehydrogenase, subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	glycerol-3-phosphate dehydrogenase chain B	Anaerobic glycerol-3-phosphate dehydrogenase, B subunit, putative	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	Residues 9 to 427 of 427 are 98 pct identical to residues 1 to 419 of a 419 aa protein from Escherichia coli K12 ref: NP_416745.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit	similar to Salmonella typhi CT18 anaerobic glycerol-3-phosphate dehydrogenase subunit B anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	anaerobic glycerol-3-phosphate dehydrogenase subunit B	G-3-P dehydrogenase; Similar to: HI0684, GLPB_HAEIN anaerobic glycerol-3-phosphate dehydrogenase subunit B	Anaerobic glycerol-3-phosphate dehydrogenase GlpB protein	Anaerobic glycerol-3-phosphate dehydrogenase subunit B	anaerobic glycerol-3-phosphate dehydrogenase, subunit B	Code: E; COG: COG3075 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit	identified by similarity to SP:P13033; match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF07992 anaerobic glycerol-3-phosphate dehydrogenase, B subunit	Code: E; COG: COG3075 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit	Code: E; COG: COG3075 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit	
ECOLI02172	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	Glycerol-3-phosphate dehydrogenase chain C	hypothetical anaerobic glycerol-3-phosphate dehydrogenase subunit C	GlpC	Fe-S oxidoreductase	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	Putative ferredoxin	Putative anaerobic glycerol-3-phosphate dehydrogenase, subunit C	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	glycerol-3-phosphate dehydrogenase chain C	Anaerobic glycerol-3-phosphate dehydrogenase, subunit C	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	Putative uncharacterized protein	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	Fe-S oxidoreductase	Residues 26 to 421 of 421 are 99 pct identical to residues 1 to 396 of a 396 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288819.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit	similar to Salmonella typhi CT18 anaerobic glycerol-3-phosphate dehydrogenase subunit C anaerobic glycerol-3-phosphate dehydrogenase subunit C	Anaerobic glycerol-3-phosphate dehydrogenase subunit C	Ferredoxin, 4Fe-4S	anaerobic glycerol-3-phosphate dehydrogenase subunit C	G-3-P dehydrogenase; Similar to: HI0683, GLPC_HAEIN anaerobic glycerol-3-phosphate dehydrogenase subunit C	Fe-S  oxidoreductases GlpC protein	sn-glycerol-3-phosphate dehydrogenase (Anaerobic), K-small subunit	anaerobic glycerol-3-phosphate dehydrogenase, subunit C	
ECOLI02173	Uncharacterized protein yfaD	Hypothetical protein yfaD	Putative uncharacterized protein yfaD	Residues 1 to 316 of 316 are 95 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288820.1 orf, conserved hypothetical protein	Code: S; COG: COG5464 conserved hypothetical protein	putative transposase	Code: S; COG: COG5464 conserved hypothetical protein	Code: S; COG: COG5464; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfaD	conserved hypothetical protein Code: S; COG: COG5464	conserved hypothetical protein	Transposase and inactivated derivative	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative transposase YhgA family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfaD	Putative uncharacterized protein yfaD	Putative uncharacterized protein yfaD	Putative uncharacterized protein yfaD	Putative uncharacterized protein yfaD	Predicted protein	Putative uncharacterized protein yfaD	YfaD protein	
ECOLI02174	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein ypaA	Putative uncharacterized protein ypaA	Putative uncharacterized protein ypaA	Putative uncharacterized protein ypaA	Predicted protein	
ECOLI02175	2-keto-3-deoxy-L-rhamnonate aldolase	2;4-dihydroxyhept-2-ene-1;7-dioic acid aldolase	2-keto-3-deoxy-L-rhamnonate aldolase	Hypothetical protein yfaU	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE HYDROXYACID ALDOLASE PROTEIN	2-keto-3-deoxy-L-rhamnonate aldolase	Probable 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase protein	identified by match to protein family HMM PF03328 HpcH/HpaI aldolase family protein	IPR005000: HpcH/HpaI aldolase putative 2,4-dihydoxyhept-2-ene-1,7-dioic acid aldolase	similar to Salmonella typhi CT18 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	LmjF25.2010, predicted protein, len = 280 aa, probably p28 protein; predicted pI = 6.1515; very good similarity and probable ortholog to Q9XY64, p28 protein in Trypanosoma cruzi;contains a good hit to a HpcH/HpaI aldolase family pfam domain hypothetical protein, conserved	Pyruvate kinase PykF protein	2-keto-3-deoxy-L-rhamnonate aldolase	2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	HpcH/HpaI aldolase	Code: G; COG: COG3836 conserved hypothetical protein	Code: G; COG: COG3836 conserved hypothetical protein	HpcH/HpaI aldolase	2-dehydro-3-deoxyglucarate aldolase	Code: G; COG: COG3836; orf conserved hypothetical protein	2-dehydro-3-deoxyglucarate aldolase PFAM: HpcH/HpaI aldolase: (1.3e-83) KEGG: sil:SPO3686 HpcH/HpaI aldolase family protein, ev=1e-106, 73% identity	2-keto-3-deoxy-L-rhamnonate aldolase	2-keto-3-deoxy-L-rhamnonate aldolase	2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	HpcH/HpaI aldolase PFAM: HpcH/HpaI aldolase KEGG: tcr:507081.130 hypothetical protein Pfam: HpcH_HpaI	2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase KEGG: reu:Reut_B4276 HpcH/HpaI aldolase TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase PFAM: HpcH/HpaI aldolase	4-hydroxy-2-oxovalerate aldolase	2-dehydro-3-deoxyglucarate aldolase PFAM: HpcH/HpaI aldolase KEGG: nfa:nfa27740 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	hypothetical protein, conserved	
ECOLI02176	Inner membrane transport protein yfaV	Putative transport protein	Hypothetical transport protein yfaV	go_component: integral to plasma membrane [goid 0005887]; go_function: nicotinamide mononucleotide permease activity [goid 0015664]; go_process: nicotinamide mononucleotide transport [goid 0015890] hypothetical protein	Putative transport protein	Putative transmembrane transporter	Tartrate transporter protein	IPR007114: Major facilitator superfamily putative MFS family transport protein	similar to Salmonella typhi CT18 putative transport protein putative transport protein	MFS Superfamily, Anion:Cation Symporter Family transporter	Putative MFS family transport protein	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Putative transmembrane transporter YfaV	Putative transmembrane transporter	Hypothetical transport protein YfaV	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: pfl:PFL_1525 major facilitator family transporter	nitrate permease	Transmembrane transporter	Transmembrane transporter	conserved hypothetical protein	Magnaporthe grisea hypothetical protein	Putative MFS transporter	Putative sugar phosphate permease	Putative transport protein	Major facilitator superfamily MFS_1	jgi|Lotgi1|53412|gw1.79.38.1	Predicted transporter	Transporter, major facilitator family	
ECOLI02177	L-rhamnonate dehydratase	Starvation-sensing protein rspA related protein	L-rhamnonate dehydratase	Hypothetical protein yfaW	racemase, putative	L-rhamnonate dehydratase	identified by match to protein family HMM PF01188; match to protein family HMM PF02746 mandelate racemase/muconate lactonizing enzyme family protein	IPR001354: Mandelate racemase/muconate lactonizing enzyme paral putative galactonate dehydratase	similar to Salmonella typhi CT18 putative MR-MLE-family protein putative MR-MLE-family protein	L-rhamnonate dehydratase	go_function: isomerase activity [goid 0016853]; go_process: aromatic compound catabolism [goid 0019439] mandelate racemase/muconate lactonizing enzyme family protein	Code: MR; COG: COG4948 putative racemase	Code: MR; COG: COG4948 putative racemase	Mandelate racemase/muconate lactonizing enzyme- like	L-rhamnonate dehydratase	L-rhamnonate dehydratase	mandelate racemase/muconate lactonizing enzyme	Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein KEGG: sec:SC2294 paral putative galactonate dehydratase	Mandelate racemase/muconate lactonizing enzyme, C -terminal domain protein	Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein KEGG: bcn:Bcen_6403 mandelate racemase/muconate lactonizing enzyme-like	Putative mandelate racemase/muconate lactonizing enzyme	hypothetical protein unknown function hypothetical protein ; unknown function; go_function: catalytic activity; go_process: metabolism	conserved hypothetical protein	Magnaporthe grisea conserved hypothetical protein	Botrytis cinerea conserved hypothetical protein	Mandelate racemase/muconate lactonizing enzyme	conserved hypothetical protein	L-alanine-DL-glutamate epimerase	PFAM: Mandelate racemase/muconate lactonizing protein KEGG: rca:Rcas_3855 mandelate racemase/muconate lactonizing protein Mandelate racemase/muconate lactonizing protein	
ECOLI02178	Uncharacterized HTH-type transcriptional regulator yfaX	Putative transcriptional regulator	Hypothetical transcriptional regulator yfaX	Putative regulator	IPR005473: Bacterial transcription regulator, ICLR-like family putative transcriptional regulator	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Putative transcriptional regulator	regulatory protein, IclR	Code: K; COG: COG1414 putative regulator	Hypothetical transcriptional regulator YfaX	Hypothetical transcriptional regulator YfaX	Regulatory proteins, IclR	putative transcriptional regulator iclR-family Putative transcriptional regulator iclR-family, Family membership	putative transcriptional regulator YfaX	IclR-type transcriptional regulator	Putative regulator	Regulatory protein, IclR	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, IclR family	Transcriptional regulator, IclR family	Transcriptional regulator, IclR family	Regulatory protein, IclR	Putative uncharacterized protein	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Transcriptional regulator, IclR family	
ECOLI02179	CinA-like protein	CinA-like protein	CinA-like protein	Competence-damage inducible protein	CinA-like protein	CinA-like protein	CinA-like protein	Putative competence-damage inducible protein	CinA-like protein	Competence-damage protein cinA	Putative uncharacterized protein STY2523	CinA-like protein	Putative competence-damage inducible protein	CinA-like protein	Putative competence-damage inducible protein	CinA-like protein	Putative competence-damage inducible protein	Putative competence-damage inducible protein	hypothetical competence damage protein CinA	CinA-like protein	Putative competence-damage inducible protein	identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00177; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200 competence/damage-inducible protein CinA	Competence damage protein CinA, putative	Competence/damage-inducible protein CinA	Putative molybdopterin binding protein	Putative competence-damage inducible protein	Putative competence-damage inducible protein	competence-damage inducible protein CinA homolog	competence-damaged protein	
ECOLI02180	Uncharacterized protein yfaZ	Putative exported protein	Hypothetical protein yfaZ	Putative exported protein	Putative uncharacterized protein	Residues 1 to 169 of 169 are 98 pct identical to residues 12 to 180 of a 180 aa protein YFAZ_ECOLI sp: P76471 orf, conserved hypothetical protein	Putative exported protein	Similar to unknown protein YfaZ of Escherichia coli	Putative uncharacterized protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative exported protein	Putative inner membrane protein	conserved hypothetical protein	putative exported protein identified by match to protein family HMM PF07437	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yfaZ	Hypothetical protein precursor	YfaZ precursor superfamily	Putative exported protein	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Outer membrane protein	YfaZ family protein precursor	Putative porin	Putative uncharacterized protein	Outer membrane protein, YfaZ	YfaZ family protein precursor	
ECOLI02181	Nucleoside triphosphatase nudI	Hypothetical conserved protein	Nucleoside triphosphatase nudI	Putative Nudix hydrolase yfaO	Nucleoside triphosphatase nudI	Residues 33 to 173 of 173 are 97 pct identical to residues 1 to 141 of a 141 aa protein from Escherichia coli K12 ref: NP_416754.1 orf, conserved hypothetical protein	MutT/nudix family protein	IPR000086: NUDIX hydrolase; IPR002667: Isopentenyl-diphosphate delta-isomerase putative NTP pyrophosphohydrolases including oxidative damage repair enzymes	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Nucleoside triphosphatase nudI	Code: LR; COG: COG0494 conserved hypothetical protein	Nucleoside triphosphatase nudI	Nucleoside triphosphatase nudI	conserved hypothetical protein Code: LR; COG: COG0494	putative Nudix hydrolase YfaO	NUDIX hydrolase	Putative enzyme	Putative uncharacterized protein	Hydrolase, NUDIX family	Nucleoside triphosphatase nudI	Hydrolase, NUDIX family	Nucleoside triphosphatase nudI	Nucleoside triphosphatase nudI	Putative uncharacterized protein	NUDIX hydrolase	Putative uncharacterized protein	Hydrolase, nudix family	Hydrolase, nudix family	Hydrolase, nudix family	
ECOLI02182	Protein ais	Ais protein	Lipopolysaccharide core heptose(II)-phosphate phosphatase	Residues 20 to 219 of 219 are 97 pct identical to residues 1 to 200 of a 200 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288828.1 protein induced by aluminum	aluminum inducible protein	similar to Salmonella typhi CT18 Ais protein Ais protein	Lipopolysaccharide core heptose(II)-phosphate phosphatase	protein induced by aluminum	protein induced by aluminum	Lipopolysaccharide core heptose(II)-phosphate phosphatase	Lipopolysaccharide core heptose(II)-phosphate phosphatase	protein induced by aluminum	aluminum inducible protein Ais	Putative uncharacterized protein	Phosphoglycerate mutase family protein	Conserved protein	Phosphoglycerate mutase family protein	Phosphoglycerate mutase precursor	Phosphoglycerate mutase family protein	Putative uncharacterized protein	Ais protein	Ais protein	Ais protein	Ais protein	Ais protein	Aluminum-inducible protein	Phosphoglycerate mutase family protein	Ais protein	Ais protein	
ECOLI02183	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	Putative aminotransferase	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	UDP-bacillosamine synthetase	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	DegT/DnrJ/EryC1/StrS aminotransferase family protein	Spore coat polysaccharide biosynthesis protein	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	Exopolysaccharide biosynthesis protein	Spore coat polysaccharide biosynthesis protein, Pyridoxal-dependent enzyme	Residues 1 to 379 of 379 are 99 pct identical to residues 12 to 390 of a 390 aa protein from Escherichia coli K12 ref: NP_416756.1 putative enzyme	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	putative DegT/DnrJ/EryC1/StrS family	similar to Salmonella typhi CT18 putative lipopolysaccharide biosynthesis protein putative lipopolysaccharide biosynthesis protein	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	Similar to previously sequenced Bacteroides fragilis putative amino sugar synthetase WcfR SWALL:Q93QV7 (EMBL:AF189282) (407 aa) fasta scores: E(): 1.5e-157, 100% id in 407 aa, and to Streptococcus suis Cps7G cps7G SWALL:Q9RFX1 (EMBL:AF164515) (404 aa) fasta scores: E(): 1.6e-67, 44.92% id in 394 aa, and to Streptococcus pneumoniae capsular polysaccharide biosynthesis protein, putative sp1837 SWALL:Q97P07 (EMBL:AE007475) (408 aa) fasta scores: E(): 1.9e-62, 43.48% id in 407 aa putative DegT/DnrJ/EryC1/StrS family amino sugar synthetase	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	identified by match to protein family HMM PF01041 flaA2 protein (flaA2)	DegT/DnrJ/EryC1/StrS aminotransferase	Code: M; COG: COG0399 putative enzyme	Code: M; COG: COG0399 putative enzyme	DegT/DnrJ/EryC1/StrS aminotransferase	DegT/DnrJ/EryC1/StrS aminotransferase	conserved hypothteical protein	DegT/DnrJ/EryC1/StrS aminotransferase	DegT/DnrJ/EryC1/StrS aminotransferase	
ECOLI02184	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Dolichol-phosphate mannosyltransferase	Dolichyl-phosphate mannose synthase related protein	Putative dolichol-phosphate mannosyltransferase	Glycosyltransferase	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Glycosyltransferases involved in cell wall biogenesis	Putative polymixin resistance glucosyl transferase	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Putative mannosyltransferase	Glycosyl transferase, group 2 family protein	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	similar to AX067093-1|CAC26774.1| percent identity: 83 in 271 aa putative prenol monophospho-mannose synthase	Residues 1 to 322 of 322 are 99 pct identical to residues 1 to 322 of a 322 aa protein from Escherichia coli K12 ref: NP_416757.1 putative sugar transferase	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Probable lipid a biosynthesis (Glycosyltransferase ) transmembrane protein	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Probable dolichyl-phosphate b-D- mannosyltransferase	IPR001173: Glycosyl transferase, family 2 putative glycosyl transferase	similar to Salmonella typhi CT18 putative lipopolysaccharide modification protein putative lipopolysaccharide modification protein	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Undecaprenyl-phosphate 4-deoxy-4-formamido-L- arabinose transferase	Glycosyl transferase	identified by match to protein family HMM PF00535 glycosyl transferase ArnC	identified by similarity to SP:P77757; match to protein family HMM PF00535 glycosyl transferase, group 2 family protein	Glycosyl transferase, family 2	
ECOLI02185	Bifunctional polymyxin resistance protein arnA	Bifunctional polymyxin resistance protein arnA	pseudo	Bifunctional polymyxin resistance protein arnA	Bifunctional polymyxin resistance protein arnA	Bifunctional polymyxin resistance protein arnA	Residues 1 to 516 of 516 are 99 pct identical to residues 145 to 660 of a 660 aa protein from Escherichia coli K12 ref: NP_416758.1 putative transformylase	Bifunctional polymyxin resistance protein arnA	Bifunctional polymyxin resistance protein arnA	Bifunctional polymyxin resistance protein arnA	similar to Salmonella typhi CT18 putative lipopolysaccharide modification protein putative lipopolysaccharide modification protein	Bifunctional polymyxin resistance protein arnA	Bifunctional polymyxin resistance protein arnA	identified by similarity to GB:AAL23678.1; match to protein family HMM PF00551; match to protein family HMM PF02911 UDP-D-glucuronate dehydrogenase	identified by similarity to GB:AAL23678.1; match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM PF07993 UDP-D-glucuronate dehydrogenase	Formyl transferase, N-terminal:Formyl transferase, C-terminal	Code: MG; COG: COG0451 putative transformylase	Code: MG; COG: COG0451 putative transformylase	putative formyl transferase	NAD-dependent epimerase/dehydratase	Code: J; COG: COG0223 putative transformylase	Bifunctional polymyxin resistance protein arnA	Formyl transferase	Bifunctional polymyxin resistance protein arnA	Formyl transferase	bifunctional polymyxin resistance ArnA protein (Polymyxin resistanceprotein pmrI) identified by match to protein family HMM PF00551; match to protein family HMM PF01370; match to protein family HMM PF02911	Bifunctional polymyxin resistance protein arnA	Bifunctional polymyxin resistance protein ArnA	putative transformylase	
ECOLI02186	Uncharacterized protein yfbH	ArnD	Putative uncharacterized protein STY2530	Putative uncharacterized protein	Hypothetical protein yfbH	Probable 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase arnD	Polysaccharide deacetylase family protein	Probable 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase arnD	Residues 1 to 296 of 296 are 99 pct identical to residues 1 to 296 of a 296 aa protein from Escherichia coli K12 ref: NP_416759.1 orf, conserved hypothetical protein	Predicted xylanase/chitin deacetylase	Probable 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase arnD	Putative polysaccharide deacetylase; protein	Probable 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase arnD	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Probable 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase arnD	identified by match to protein family HMM PF01522 polysaccharide deacetylase family protein	identified by match to protein family HMM PF01522 polysaccharide deacetylase family protein	Polysaccharide deacetylase	Polysaccharide deacetylase	Code: G; COG: COG0726 conserved hypothetical protein	Code: G; COG: COG0726 conserved hypothetical protein	Polysaccharide deacetylase	conserved hypothetical protein	Polysaccharide deacetylase	Polysaccharide deacetylase	Code: G; COG: COG0726; orf conserved hypothetical protein	
ECOLI02187	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L- arabinose arabinosyl transferase	Integral membrane protein	Putative uncharacterized protein	Slr1820 protein	Uncharacterized protein aq_1220	Putative uncharacterized protein	Putative uncharacterized protein	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L- arabinose arabinosyl transferase	Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L- arabinose arabinosyl transferase	Putative membrane protein	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L- arabinose arabinosyl transferase	similar to GP:4433524; identified by sequence similarity; putative dolichyl-phosphate-mannose-protein mannosyltransferase family protein	Putative membrane protein	Putative membrane protein	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L- arabinose arabinosyl transferase	Putative membrane protein	hypothetical protein	Dolichyl-phosphate-mannose-protein mannosyltransferase family protein	MELITTIN RESISTANCE PROTEIN PQAB	Putative uncharacterized protein VP2020	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L- arabinose arabinosyl transferase	hypothetical protein	Glycosyl transferase, family 39	Dolichyl-phosphate-mannose-protein mannosyltransferase	Residues 1 to 509 of 509 are 99 pct identical to residues 42 to 550 of a 550 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288833.1 orf, conserved hypothetical protein	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L- arabinose arabinosyl transferase	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L- arabinose arabinosyl transferase	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L- arabinose arabinosyl transferase	
ECOLI02188	Inner membrane protein yfbW	Hypothetical protein	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnE	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnE	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnE	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnE	Putative uncharacterized protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnE	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnE	identified by similarity to PIR:H83201 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnE	Putative membrane protein precursor	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnE	Membrane protein precursor	conserved hypothetical protein	Putative membrane protein precursor	Hypothetical protein	sucrose-6 phosphate hydrolase Code: GER; COG: COG0697	Membrane protein precursor	Putative Transporter	Transporter of the DMT superfamily, small multidrug resistance(SMR) family	Putative uncharacterized protein	Small multidrug resistance protein	KEGG: pfl:PFL_3048 hypothetical protein conserved hypothetical protein	
ECOLI02190	Signal transduction protein pmrD	Polymyxin B resistance protein pmrD	Polymyxin resistance protein B	Residues 8 to 90 of 90 are 97 pct identical to residues 16 to 98 of a 98 aa protein from Escherichia coli K12 ref: NP_416762.1 polymyxin resistance protein B	similar to Salmonella typhi CT18 polymyxin B resistance protein polymyxin B resistance protein	Signal transduction protein pmrD	polymyxin resistance protein B	polymyxin resistance protein B	polymyxin resistance protein B	Polymyxin B resistance protein pmrD	Polymyxin B resistance protein PmrD	polymyxin B resistance protein PmrD	Putative uncharacterized protein	Polymyxin B resistance protein pmrD	Polymyxin resistance protein B	Polymyxin B resistance protein pmrD	Polymyxin resistance protein B	Polymyxin B resistance protein pmrD	Putative uncharacterized protein	Polymyxin B resistance protein	Signal transduction protein PmrD	Signal transduction protein PmrD	Signal transduction protein PmrD	Polymyxin B resistance protein	Polymyxin B resistance protein pmrD	Signal transduction protein PmrD	Polymyxin B resistance protein pmrD	Signal transduction protein PmrD	Polymyxin B resistance protein	
ECOLI02189	UPF0188 membrane protein yfbJ	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnF	UPF0188 membrane protein yfbJ	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnF	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnF	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnF	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnF	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnF	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnF	identified by similarity to SP:Q9HY59 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnF	Putative membrane protein	Probable 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol flippase subunit arnF	Membrane protein	conserved hypothetical protein	Putative membrane protein	Hypothetical protein	putative membrane protein	putative transport/receptor protein	Membrane protein	Putative uncharacterized protein	KEGG: ent:Ent638_2073 hypothetical protein conserved hypothetical protein	Putative uncharacterized protein yfbJ	
ECOLI02191	2-succinylbenzoate--CoA ligase	O-succinylbenzoic acid--CoA ligase	2-succinylbenzoate--CoA ligase	Probable O-succinylbenzoic acid--CoA ligase	MenE	O-succinylbenzoic acid--CoA ligase	O-succinylbenzoic acid-CoA ligase	O-succinylbenzoyl-CoA synthetase	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II	O-succinylbenzoic acid-CoA ligase	hypothetical o-succinylbenzoate-CoA ligase	O-succinylbenzoic acid--CoA ligase	O-succinylbenzoic acid--CoA ligase	O-succinylbenzoic acid--CoA ligase, putative	O-succinylbenzoic acid--CoA ligase	O-succinylbenzoic acid-CoA ligase	O-succinylbenzoic acid-CoA ligase	Putative ligase	O-succinylbenzoate-CoA ligase	O-succinylbenzoic acid--CoA ligase	Residues 1 to 451 of 451 are 97 pct identical to residues 1 to 451 of a 451 aa protein from Escherichia coli K12 ref: NP_416763.1 o-succinylbenzoate-CoA ligase	Putative O-succinylbenzoic acid--CoA ligase	O-succinylbenzoic acid--CoA ligase	O-succinylbenzoic acid-CoA ligase	Mb0102, fadD10, len: 540 aa. Equivalent to Rv0099, len: 540 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 540 aa overlap). Possible fadD10, fatty-acid-CoA synthetase (EC 6.2.1.-), equivalent to MLACEA_4|Q50176 LONG CHAIN FATTY ACID-COA LIGASE from Mycobacterium leprae (532 aa), FASTA scores: opt: 2580, E(): 0, (74.6% identity in 531 aa overlap). Also similar to many e.g. BAB69379.1|AB070955 long-chain fatty acid--CoA ligase from Streptomyces avermitilis (518 aa); NP_419782.1|NC_002696 putativ long-chain-fatty-acid--CoA ligase from Caulobacter crescentus (530 aa); NP_435326.1|NC_003037 probable long chain fatty acid CoA ligase from Sinorhizobium meliloti (508 aa); etc. Also similar to ACSA_BACSU|P39062 acetyl-coenzyme A synthetase from Bacillus subtilis (572 aa), FASTA scores: opt: 415, E(): 9.8e-20, (27.1% identity in 539 aa overlap). Contains PS00455 putative AMP-binding domain signature. BELONGS TO THE ATP-DEPENDENT AMP-BINDING ENZYME FAMILY. POSSIBLE FATTY-ACID-COA LIGASE FADD10 (FATTY-ACID-COA SYNTHETASE) (FATTY-ACID-COA SYNTHASE)	IPR000873: AMP-dependent synthetase and ligase o-succinylbenzoate-CoA ligase	similar to Salmonella typhi CT18 O-succinylbenzoic acid-CoA ligase O-succinylbenzoic acid-CoA ligase	Putative O-succinylbenzoic acid--CoA ligase	O-succinylbenzoic acid--CoA ligase	
ECOLI02192	o-succinylbenzoate synthase	O-succinylbenzoate-CoA synthase	o-succinylbenzoate synthase	O-succinylbenzoate synthase	o-succinylbenzoate synthase	putative o-succinylbenzoate-CoA synthase	O-succinylbenzoate-CoA synthase	o-succinylbenzoate synthase	O-succinylbenzoate-CoA synthase	o-succinylbenzoate synthase	O-succinylbenzoate-CoA synthase	o-succinylbenzoate synthase	Putative o-succinylbenzoate synthase II, menC	O-succinylbenzoate synthase	Residues 1 to 320 of 320 are 97 pct identical to residues 10 to 329 of a 329 aa protein from Escherichia coli dbj: BAA16085.1 O-succinylbenzoate-CoA synthase (OSB synthase) (4-(2'-carboxyphenyl)-4-oxybutyric acid synthase)	o-succinylbenzoate synthase	o-succinylbenzoate synthase	O-succinylbenzoate-CoA synthase	o-succinylbenzoyl-CoA synthase	similar to Salmonella typhi CT18 O-succinylbenzoate-CoA synthase O-succinylbenzoate-CoA synthase	o-succinylbenzoate synthase	O-succinylbenzoate synthase	OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; O-succinylbenzoic acid synthase; Similar to: HI0969, MENC_HAEIN O-succinylbenzoate synthase	O-succinylbenzoate synthase and related enzymes DgoA protein	o-succinylbenzoate synthase	O-succinylbenzoate-CoA synthase	Mandelate racemase/muconate lactonizing enzyme	Code: H; COG: COG1441 O-succinylbenzoyl-CoA synthase	conversion of chorismate to 2-o-succinylbenzoyl-CoA; Code: H; COG: COG1441 o-succinylbenzoyl-CoA synthase	
ECOLI02193	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	Dihydroxynaphthoic acid synthase	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	MenB protein	Dihydroxynapthoic acid synthetase	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	Naphthoate synthase	dihydroxynapthoic acid synthetase	Naphthoate synthase	Dihydroxynaphtoic acid synthetase	CDS_ID OB2323 naphthoate synthase	Probable naphthoate synthase, menB	Dihydroxynaphthoic acid synthase	MenB protein	Residues 1 to 285 of 285 are 99 pct identical to residues 1 to 285 of a 285 aa protein from Escherichia coli K12 ref: NP_416765.1 dihydroxynaphtoic acid synthetase	Naphthoate synthase	Naphthoate synthase	
ECOLI02194	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate synthase	Putative acyl-CoA thioester hydrolase HI0282	Thioesterase, menaquinone synthesis gene	Hydrolase, alpha/beta hydrolase fold family	Putative uncharacterized protein	Putative uncharacterized protein VV1117	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate synthase	All2753 protein	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1- carboxylante synthase	Lmo1674 protein	Menaquinone biosynthesis related protein	Hydrolase; menaquinone biosynthesis related protein; possible prolyl aminopeptidase	hypothetical protein	Predicted hydrolase or acyltransferase	Hypothetical protein yfbB	identified by match to protein family HMM PF00561 hydrolase, alpha/beta fold family	Putative uncharacterized protein	Hydrolase, alpha/beta fold family	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate synthase	hypothetical conserved protein	Putative uncharacterized protein VP0930	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate synthase	CDS_ID OB2324; proline iminopeptidase prolyl aminopeptidase	Predicted hydrolase or acyltransferase	Lin1782 protein	Residues 1 to 252 of 252 are 98 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli K12 ref: NP_416766.1 putative enzyme	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate synthase	Similar to prolyl aminopeptidase	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate synthase	
ECOLI02195	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	Possible decarboxylase with tpp domain+d236	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-6-hydroxy-2;4-cyclohexadiene-1- carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-OXOGLUTARATE DECARBOXYLASE	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylatesynthase/2-oxoglutarate decarboxylase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	Menaquinone biosynthesis protein menD	2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase	identified by match to protein family HMM PF02776; match to protein family HMM TIGR00173 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase	
ECOLI02196	Menaquinone-specific isochorismate synthase	Anthranilate synthase component I	Menaquinone-specific isochorismate synthase	Isochorismate synthase	Menaquinone-specific isochorismate synthase	Isochorismate synthase	Menaquinone-specific isochorismate synthase	Isochorismate synthase	Isochorismate synthase	hypothetical menaquinone-specific isochorismate synthase	Menaquinone-specific isochorismate synthase	Menaquinone-specific isochorismate synthase	Menaquinone-specific isochorismate synthase, putative	Menaquinone-specific isochorismate synthase	Menaquinone-specific isochorismate synthase	Isochorismate hydroxymutase 2, menaquinone biosynthesis	Isochorismate synthase	Residues 1 to 431 of 431 are 99 pct identical to residues 1 to 431 of a 431 aa protein MENF_ECOLI sp: P38051 menaquinone-specific isochorismate synthase	Menaquinone-specific isochorismate synthase	Menaquinone-specific isochorismate synthase	menaquinone-specific isochorismate synthase	Anthranilate synthase component I	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark anthranilate synthase component I	IPR005801: Anthranilate synthase component I and chorismate binding protein isochorismate synthase (isochorismate hydroxymutase 2), menaquinone biosynthesis	similar to Salmonella typhi CT18 isochorismate synthase isochorismate synthase	Anthranilate synthase component I	Menaquinone-specific isochorismate synthase	isochorismate synthase	isochorismate mutase; Similar to: HI0285, MENF_HAEIN menaquinone-specific isochorismate synthase	
ECOLI02197	Protein elaB	Protein elaB	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein elaB	Residues 1 to 101 of 101 are 99 pct identical to residues 1 to 101 of a 101 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288844.1 orf, conserved hypothetical protein	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein	Putative inner membrane protein	identified by match to protein family HMM PF05957 transmembrane protein	identified by match to protein family HMM PF05957 conserved hypothetical protein	protein of unknown function DUF883	Code: S; COG: COG4575 conserved hypothetical protein	Code: S; COG: COG4575 conserved hypothetical protein	Code: S; COG: COG4575; orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein elaB	Membrane protein	Putative membrane protein	conserved hypothetical protein Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein Code: S; COG: COG4575	Membrane protein	conserved hypothetical protein	
ECOLI02198	Protein elaA	Acetyltransferase	Putative uncharacterized protein	UPF0039 protein sll0451	ElaA protein	Putative uncharacterized protein	ElaA protein	Putative uncharacterized protein STY2543	Predicted acyltransferases	Putative uncharacterized protein	putative ElaA-like protein	Protein elaA	identified by match to PFAM protein family HMM PF00583 acetyltransferase, GNAT family	ElaA protein	Acetyltransferase, GNAT family	Putative acyltransferase	Acetyltransferase	Acetyltransferase, GNAT family	Putative acyltransferase	Acetyltransferase, GNAT family	Acetyltransferase family protein	ACETYLTRANSFERASE	ElaA protein	Putative uncharacterized protein elaA	CDS_ID OB1229 hypothetical protein	hypothetical protein	BH2982 protein	Predicted acyltransferase	ElaA-like protein	
ECOLI02199	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Putative uncharacterized protein	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	identified by match to PFAM protein family HMM PF03190 AtsA/ElaC family protein	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	hypothetical elaC protein	Ribonuclease Z	Ribonuclease Z	Ribonuclease Z	Metallo-beta-lactamase family protein	
ECOLI02200	Protease elaD	Protease elaD	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Deubiquitinase sseL	Deubiquitinase sseL	Putative uncharacterized protein	Predicted enzyme	Deubiquitinase sseL	Putative uncharacterized protein	Deubiquitinase	Deubiquitinase	Deubiquitinase	Putative uncharacterized protein	Putative uncharacterized protein	Deubiquitinase	Putative uncharacterized protein	Putative uncharacterized protein	Putative enzyme	Putative enzyme	Putative enzyme	Putative enzyme	Putative uncharacterized protein	ElaD protein	Predicted enzyme	Predicted enzyme	Peptidase C48 SUMO/Sentrin/Ubl1	
ECOLI02201	Uncharacterized protein yfbK	Putative uncharacterized protein	Putative outer membrane protein	Hypothetical protein yfbK	pseudo	Putative exported protein	Von Willebrand factor type A domain protein	Putative exported protein	hypothetical protein	IPR002035: von Willebrand factor, type A putative von Willebrand factor, vWF type A domain	Similar to Bacteroides thetaiotaomicron conserved hypothetical protein, putative outer membrane protein BT4465 SWALL:Q89ZB2 (EMBL:AE016945) (621 aa) fasta scores: E(): 3.4e-171, 73.73% id in 613 aa, and to Escherichia coli hypothetical protein YfbK or B2270 SWALL:YFBK_ECOLI (SWALL:P76481) (575 aa) fasta scores: E(): 2.5e-73, 47.45% id in 472 aa conserved exported hypothetical protein	Putative von Willebrand factor, vWF type A domain protein	conserved hypothetical protein	identified by match to protein family HMM PF00092 von Willebrand factor type A domain protein	Gene neighborhood linkage with RSP_1014 ECF sigma factor Putative membrane protein with von Willebrand (VWA) domain	von Willebrand factor, type A	von Willebrand factor, type A	conserved hypothetical protein similarity:fasta; SWALL:Q98L15 (EMBL:AP002996); Rhizobium loti; hypothetical protein mll1222; length 638 aa; 644 aa overlap; query 1-641 aa; subject 1-634 aa	putative secreted protein	hypothetical conserved protein Similar to mll1222 [Mesorhizobium loti] Similar to swissprot:Q98L15 Putative location:bacterial inner membrane Psort-Score: 0.2190	Von Willebrand factor, type A precursor	Von Willebrand factor, type A precursor	Arginine biosynthesis protein ArgJ	Von Willebrand factor, type A precursor	Putative uncharacterized protein yfbK	secreted protein containing von Willebrand facto r type A domain	von Willebrand factor type A domain protein COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain	conseved hypothetical exported protein Hypothetical protein yfbK. The von Willebrand factor is a large multimeric glycoprotein found in blood plasma.  Mutant forms are involved in the aetiology of bleeding disorders [1]. In von Willebrand factor, the type A domain (vWF) is the prototype for a protein superfamily.  trembl:Q8P6Q2: 55% identity; 66% similarity InterPro:IPR002016; Peroxidase. IPR002035; VWF_A. Pfam: PF00092; VWA; 1. SMART: SM00327; VWA; 1. cdhD: CO dehydrogenase/acetyl-CoA syn Signal peptide present (0.927 probability); SignalP predicted. No transmembrane helices (TMHMM predicted). Function unclear	von Willebrand factor type A domain protein identified by match to protein family HMM PF00092	
ECOLI02202	Uncharacterized protein yfbL	Hypothetical protein yfbL	Putative uncharacterized protein	peptidase, M28A family identified by match to protein family HMM PF04389	Peptidases M20 and M28	peptidase, M28A family identified by match to protein family HMM PF04389	predicted aminopeptidase COG2234	Putative uncharacterized protein	Putative aminopeptidase	conserved hypothetical protein	Putative membrane protein	Peptidase M28	Peptidase M28	Predicted peptidase	Peptidase, M28A family	Peptidase, M28 family	M28A family peptidase	Peptidase M28 precursor	Putative uncharacterized protein	Peptidase M28	Peptidase M28	Putative membrane-associated peptidase	Putative membrane-associated peptidase	Putative membrane-associated peptidase	Putative membrane-associated peptidase	Predicted peptidase	Peptidase M28	Peptidase M28	Peptidase, M28 family	
ECOLI02203	Protein yfbM	Putative uncharacterized protein yfbM	Putative uncharacterized protein	Residues 1 to 107 of 107 are 59 pct identical to residues 1 to 167 of a 167 aa protein from Escherichia coli K12 ref: NP_416775.1 orf, conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfbM	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfbM	Putative uncharacterized protein yfbM	Putative uncharacterized protein yfbM	Putative uncharacterized protein yfbM	Putative uncharacterized protein yfbM	Predicted protein	Putative uncharacterized protein yfbM	YfbM protein	Predicted protein	
ECOLI02204	Uncharacterized protein yfbN	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	
ECOLI02205	Uncharacterized protein yfbO	Putative uncharacterized protein	Predicted protein	
ECOLI02206	Uncharacterized protein yfbP	Putative uncharacterized protein	Predicted protein	
ECOLI02207	NADH-quinone oxidoreductase subunit N	NADH dehydrogenase subunit N	NADH dehydrogenase I chain L	NADH dehydrogenase I, chain N	NADH dehydrogenase I, subunit 2	NADH dehydrogenase I chain N	hypothetical NADH-plastoquinone oxidoreductase subunit 2	NAD(P)H-quinone oxidoreductase chain 2	NADH-quinone oxidoreductase subunit N	NADH dehydrogenase I chain N	NADH dehydrogenase I, N subunit	NADH dehydrogenase I, N subunit	NADH-quinone oxidoreductase chain N	NADH-quinone oxidoreductase subunit N	NADH-quinone oxidoreductase subunit N	NADH-quinone oxidoreductase subunit N	NADH-quinone oxidoreductase subunit N	NADH-quinone oxidoreductase chain N	NADH dehydrogenase I, subunit N	NADH-quinone oxidoreductase subunit N	NADH-quinone oxidoreductase chain N	NADH dehydrogenase/oxidoreductase	identified by match to protein family HMM PF00361; match to protein family HMM TIGR01770 NADH dehydrogenase I, N subunit	NADH-quinone oxidoreductase subunit N	NADH dehydrogenase I, N subunit	NADH-quinone oxidoreductase subunit N	NADH-quinone oxidoreductase subunit N	NADH dehydrogenase I, N subunit	NADH-quinone oxidoreductase subunit N	
ECOLI02208	NADH-quinone oxidoreductase subunit M	F420H2:quinone oxidoreductase chain M	NADH dehydrogenase I chain K	Putative NADH dehydrogenase I chain M	NADH dehydrogenase I chain M	NADH dehydrogenase, chain M related protein	NADH-quinone oxidoreductase subunit M	NADH dehydrogenase I chain M	NADH dehydrogenase I, M subunit	NADH dehydrogenase I, M subunit	NADH-quinone oxidoreductase chain M	NADH dehydrogenase I chain M	NADH dehydrogenase (Ubiquinone), M subunit	NADH-quinone oxidoreductase chain M	NADH dehydrogenase I, subunit M	NADH dehydrogenase I chain M	identified by match to protein family HMM PF00361 NADH dehydrogenase I, M subunit	NADH dehydrogenase I, M subunit	NADH-quinone oxidoreductase chain M	glimmer prediction; similar to NADH  I CHAIN M (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN M) [Rhodobacter capsulatus] ACCESSION P50974, similar to NADH-Ubiquinone/plastoquinone (complex I), various chains NuoM2 NADH-Ubiquinone/plastoquinone (complex I) oxidoreductase	NADH-quinone oxidoreductase subunit M	NADH dehydrogenase I, M subunit	NADH:ubiquinone oxidoreductase subunit 4 (chain M)	Putative NADH dehydrogenase I chain M	NADH dehydrogenase I chain M	NADH-quinone oxidoreductase subunit M	Putative NADH-ubiquinone oxidoreductase chain M	NADH-ubiquinone dehydrogenase chain M	NADH-quinone oxidoreductase subunit M	
ECOLI02209	NADH-quinone oxidoreductase subunit L	NADH dehydrogenase I, L subunit	NADH-ubiquinone oxidoreductase subunit	Putative NADH dehydrogenase I chain L	NADH dehydrogenase I chain L	NADH dehydrogenase I chain 5	NADH-quinone oxidoreductase subunit L	NADH-quinone oxidoreductase subunit L	NADH-quinone oxidoreductase subunit L	NADH dehydrogenase I, L subunit	NADH dehydrogenase I chain L	NADH-quinone oxidoreductase chain L	NADH dehydrogenase I chain L	NADH dehydrogenase (Ubiquinone), L subunit	NADH-quinone oxidoreductase chain L	NADH dehydrogenase I, subunit L	NADH dehydrogenase I, L subunit	NADH dehydrogenase I chain L	NADH dehydrogenase I chain L	NADH dehydrogenase I L subunit	identified by match to protein family HMM PF00361; match to protein family HMM PF00662 NADH dehydrogenase I, L subunit	NADH-quinone oxidoreductase subunit L	NADH-ubiquinone oxidoreductase, chain L	NADH-ubiquinone oxidoreductase, chain L	NADH dehydrogenase I, L subunit	NADH-quinone oxidoreductase chain L	NADH dehydrogenase I subunit L	NADH-quinone oxidoreductase subunit L	NADH dehydrogenase I, L subunit	
ECOLI02210	NADH-quinone oxidoreductase subunit K	NADH dehydrogenase I chain H	NADH dehydrogenase I chain K	Probable NADH dehydrogenase, chain K	NADH-quinone oxidoreductase chain K	NADH-quinone oxidoreductase subunit K	NADH dehydrogenase I chain K	NADH dehydrogenase I chain k	Probable NADH dehydrogenase, subunit 4L	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase chain K	NADH dehydrogenase I, K subunit	NADH-quinone oxidoreductase subunit K	glimmer prediction; similar to NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NuoK2 NADH  I chain K	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K 2	NADH-quinone oxidoreductase subunit K	Residues 1 to 100 of 100 are 100 pct identical to residues 1 to 100 of a 100 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288853.1 NADH dehydrogenase I chain K	NADH dehydrogenase i chain k	NADH-quinone oxidoreductase subunit K	identified by similarity to SP:P50940; match to protein family HMM PF00420 NADH-quinone oxidoreductase, K subunit	NADH-quinone oxidoreductase subunit K	IPR003215: NADH dehydrogenase (ubiquinone), type 1 NADH dehydrogenase I chain K	similar to Salmonella typhi CT18 NADH dehydrogenase I chain k NADH dehydrogenase I chain k	NADH dehydrogenase I chain K	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme NADH dehydrogenase I chain K	NADH-quinone oxidoreductase subunit K	
ECOLI02211	NADH-quinone oxidoreductase subunit J	NADH-ubiquinone oxidoreductase NQO10 subunit	Putative NADH dehydrogenase I chain J	NADH dehydrogenase I chain J	NADH-quinone oxidoreductase subunit J	NADH dehydrogenase I chain J	NADH-quinone oxidoreductase chain J	NADH dehydrogenase I chain J	NADH dehydrogenase (Ubiquinone), J subunit	NADH dehydrogenase I, subunit J	NADH-quinone oxidoreductase chain J	NADH dehydrogenase I, J subunit	NADH-quinone oxidoreductase chain J	NADH-quinone oxidoreductase subunit J	NADH dehydrogenase I, J subunit	Putative NADH dehydrogenase I chain J	NADH-quinone oxidoreductase subunit J	NADH-ubiquinone dehydrogenase chain J	NADH-quinone oxidoreductase subunit J	SCD16A.12c, nuoJ, NADH dehydrogenase subunit, len: 285 aa; similar to many e.g. TR:P95172 (EMBL:Z83867) NuoJ, NADH dehydrogenase subunit from Mycobacterium tuberculosis (262 aa) fasta scores; opt: 991, z-score: 1118.0, E(): 0, (63.4% identity in 243 aa overlap) and SW:NUOJ_ECOLI, NADH dehydrogenase subunit NuoJ from Escherichia coli (184 aa) fasta scores; opt: 263, z-score: 306.0, E(): 1e-09, (32.0% identity in 169 aa overlap). Contains Pfam match to entry PF00499 oxidored_q3, NADH-ubiquinone/plastoquinone oxidoreductase chain 6. Contains possible membrane spanning hydrophobic regions NuoJ, NADH dehydrogenase subunit	Residues 1 to 184 of 184 are 100 pct identical to residues 1 to 184 of a 184 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288854.1 NADH dehydrogenase I chain J	NADH dehydrogenase I chain J	NADH dehydrogenase I chain J	NADH-ubiquinone oxidoreductase, NQO10 subunit	identified by similarity to SP:P33605; match to protein family HMM PF00499 NADH-quinone oxidoreductase, J subunit	NADH dehydrogenase I chain J	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark NADH-ubiquinone oxidoreductase NQO10 subunit	NADH-quinone oxidoreductase subunit 10	NADH dehydrogenase I chain J	
ECOLI02212	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I 2	NADH dehydrogenase subunit I	NADH dehydrogenase I chain F	NADH-quinone oxidoreductase subunit I 1	NADH dehydrogenase, chain ndhI	NADH-quinone oxidoreductase chain I	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit 9	NADH-quinone oxidoreductase subunit I	Similar to NADH dehydrogenase, subunit 8	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I	glimmer prediction; similar to CG3944 gene product [Drosophila melanogaster] ACCESSION AAF55234 putative oxidoreductase	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I 2	NADH-quinone oxidoreductase subunit I	SCD16A.13c, nuoI, NADH dehydrogenase subunit, len: 211 aa; similar to many e.g. TR:P95173 (EMBL:Z83867) NuoI, NADH dehydrogenase subunit from Mycobacterium tuberculosis (211 aa) fasta scores; opt: 825, z-score: 979.0, E(): 0, (70.1% identity in 164 aa overlap) and SW:NUOI_ECOLI, NADH dehydrogenase subunit NuoI from Escherichia coli (180 aa) fasta scores; opt: 394, z-score: 474.3, E(): 4.3e-19, (39.3% identity in 163 aa overlap). Contains Pfam match to entry PF00037 fer4, 4Fe-4S ferredoxins and related iron-sulfur cluster binding domains and 2 Prosite matches to PS00198 4Fe-4S ferredoxins, iron-sulfur binding region signature. NuoI, NADH dehydrogenase subunit	Residues 1 to 180 of 180 are 100 pct identical to residues 37 to 216 of a 216 aa protein from Escherichia coli dbj: BAA16109.1 NADH dehydrogenase I chain I (NADH-ubiquinone oxidoreductase chain 9) (NUO9)	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I	NADH-quinone oxidoreductase subunit I	Mb3177, nuoI, len: 211 aa. Equivalent to Rv3153, len: 211 aa, from Mycobacterium tuberculosis strain H37Rv, (99.5% identity in 211 aa overlap). Probable nuoI, NADH dehydrogenase I, chain I (EC 1.6.5.3), similar to others e.g. Q9XAR2|NUOI from Streptomyces coelicolor (211 aa), FASTA scores: opt: 825, E(): 9.3e-44, (70.1% identity in 164 aa overlap); Q56224|NQO9_THETH from Thermus aquaticus (subsp. thermophilus) (182 aa), FASTA scores: opt: 543, E(): 1.8e-26, (50.9% identity in 163 aa overlap); Q9RU95|DR1497 from Deinococcus radiodurans (178 aa), FASTA scores: opt: 527, E(): 1.7e-25, (48.75% identity in 162 aa overlap); etc. Contains two 4Fe-4S ferredoxins, iron-sulfur binding region signatures (PS00198). BELONGS TO THE COMPLEX I 23 KDA SUBUNIT FAMILY. THE IRON-SULFUR CENTERS ARE SIMILAR TO THOSE OF 'BACTERIAL-TYPE' 4FE-4S FERREDOXINS. COFACTOR: BINDS TWO 4FE-4S CLUSTERS. PROBABLE NADH DEHYDROGENASE I (CHAIN I) NUOI (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN I)	NADH-quinone oxidoreductase subunit I	
ECOLI02213	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H 2	NADH-ubiquinone oxidoreductase subunit	NADH dehydrogenase subunit H	F(420)H(2) oxidoreductase subunit H	NAD(P)H-quinone oxidoreductase subunit 1	F420H2:quinone oxidoreductase, 41.2 kDa subunit, putative	NADH dehydrogenase, subunit I related protein	NADH-quinone oxidoreductase chain H	NAD(P)H-quinone oxidoreductase subunit 1	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit 8	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H	NADH dehydrogenase/oxidoreductase	identified by match to protein family HMM PF00146 NADH dehydrogenase I, H subunit	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H	glimmer prediction; similar to NADH  I CHAIN H (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN H) [Mycobacterium tuberculosis] ACCESSION P95174 NuoH2 NADH  chain H	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit H 2	
ECOLI02214	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase chain 3	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase	(NADH-UBIQUINONE OXIDOREDUCTASE CHAIN G 2); glimmer prediction; identical to NADH  I CHAIN G 2 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN G 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56914, possibly in operon with NuoA2, NuoB2, NuoC2, NuoD2, NuoE2, NuoF2 NuoG2 NADH  I CHAIN G 2	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase	NADH-quinone oxidoreductase subunit G	Residues 1 to 910 of 910 are 99 pct identical to residues 1 to 910 of a 910 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288857.1 NADH dehydrogenase I chain G	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase	NADH-quinone oxidoreductase subunit G	IPR000283: Respiratory-chain NADH dehydrogenase 75 kDa subunit; IPR001041: Ferredoxin; IPR006656: Molybdopterin oxidoreductase;IPR006963: Molybdopterin oxidoreductase Fe4S4 domain NADH dehydrogenase I chain G	similar to Salmonella typhi CT18 NADH dehydrogenase I chain G NADH dehydrogenase I chain G	NADH-quinone oxidoreductase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme NADH dehydrogenase I chain G	NADH-quinone oxidoreductase	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase subunit G	NADH-quinone oxidoreductase subunit G	ortholog to Escherichia coli bnum: b2283; MultiFun: Metabolism 1.3.6; Metabolism 1.3.7, 1.4.1; Transport 4.3.D.1, 4.S.130 NADH dehydrogenase I chain G	identified by match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF04879; match to protein family HMM TIGR01973 NADH-quinone oxidoreductase, G subunit	identified by similarity to SP:P33602; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF04879; match to protein family HMM TIGR01973 NADH-quinone oxidoreductase, G subunit	NADH-quinone oxidoreductase, chain G	Code: C; COG: COG1034 NADH dehydrogenase I chain G	
ECOLI02215	NADH-quinone oxidoreductase subunit F	NADH dehydrogenase I, F subunit	Putative NADH dehydrogenase I chain F	NADH-quinone oxidoreductase subunit F	NADH dehydrogenase I chain F	NADH dehydrogenase I chain F	NADH dehydrogenase I, F subunit	NADH-quinone oxidoreductase chain F	NADH dehydrogenase I subunit F	(NADH-UBIQUINONE OXIDOREDUCTASE CHAIN F); glimmer prediction; identical to NADH  I CHAIN F (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN F 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56913, possibly in operon with NuoA2, NuoB2, NuoC2, NuoD2, NuoE2, NuoG2 NuoF2 NADH  I CHAIN F	NADH-quinone oxidoreductase subunit F	NADH dehydrogenase I, F subunit	NADH dehydrogenase I chain F	NADH dehydrogenase I chain F	NADH-ubiquinone dehydrogenase chain F	NADH-quinone oxidoreductase subunit F	SCD16A.16c, nuoF, NADH dehydrogenase subunit, len: 449 aa; similar to many e.g. TR:P95176 (EMBL:Z83867) NuoF, NADH dehydrogenase subunit from Mycobacterium tuberculosis (445 aa) fasta scores; opt: 2314, z-score: 2659.4, E(): 0, (76.3% identity in 434 aa overlap) and SW:NUOF_ECOLI, NADH dehydrogenase subunit NuoF from Escherichia coli (445 aa) fasta scores; opt: 1346, z-score: 1547.8, E(): 0, (48.1% identity in 405 aa overlap). Contains Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. NuoF, NADH dehydrogenase subunit	Residues 1 to 445 of 445 are 100 pct identical to residues 1 to 445 of a 445 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288858.1 NADH dehydrogenase I chain F	NADH dehydrogenase I chain F	NADH dehydrogenase I chain F	NuoF	NADH dehydrogenase I chain F	IPR001949: Respiratory-chain NADH dehydrogenase, 51 kDa subunit NADH dehydrogenase I chain F	similar to Salmonella typhi CT18 NADH dehydrogenase I chain F NADH dehydrogenase I chain F	NADH dehydrogenase I chain F	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme NADH dehydrogenase I chain F	NADH dehydrogenase I, F subunit	NADH dehydrogenase I, F subunit	NADH-quinone oxidoreductase subunit F	
ECOLI02216	NADH-quinone oxidoreductase subunit E	tr|Q9UUT9 Yarrowia lipolytica Subunit NUHM of protein NADH:ubiquinone oxidoreductase (Complex I) (EC 1.6.  99.3), identified start	NADH dehydrogenase I, E subunit	NADH-quinone oxidoreductase subunit E	NADH-quinone oxidoreductase subunit E	NADH-quinone oxidoreductase chain E	NADH-quinone oxidoreductase subunit E	NADH-quinone oxidoreductase chain E	similar to GP:15156323, GB:L11654, SP:P48220, and PID:496313; identified by sequence similarity; putative NADH dehydrogenase I, E subunit	NADH dehydrogenase I, E subunit	NADH-quinone oxidoreductase chain E	NADH-quinone oxidoreductase subunit E	NADH dehydrogenase I, E subunit	Putative NADH dehydrogenase I chain E	NADH-QUINONE OXIDOREDUCTASE CHAIN E	NADH dehydrogenase I chain E	NADH-ubiquinone dehydrogenase chain E	NADH-quinone oxidoreductase subunit E	Residues 1 to 166 of 166 are 100 pct identical to residues 1 to 166 of a 166 aa protein from Escherichia coli K12 ref: NP_416788.1 NADH dehydrogenase I chain E	NADH dehydrogenase I chain E	NADH dehydrogenase I chain E	NADH dehydrogenase I chain E	NADH-quinone oxidoreductase subunit 2	IPR002023: NADH dehydrogenase (ubiquinone), 24 kDa subunit NADH dehydrogenase I chain E	similar to Salmonella typhi CT18 NADH dehydrogenase I chain E NADH dehydrogenase I chain E	similar to BR0806, NADH dehydrogenase I, E subunit NuoE, NADH dehydrogenase I, E subunit	NADH dehydrogenase I chain E	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme NADH dehydrogenase I chain E	NADH dehydrogenase I, E subunit	
ECOLI02217	NADH-quinone oxidoreductase subunit C/D	NuoD homolog	F420H2:quinone oxidoreductase, 45 kDa subunit	394aa long hypothetical NADH-ubiquinone oxidoreductase subunit	NADH-quinone oxidoreductase subunit C/D	NADH-quinone oxidoreductase subunit C/D 2	NAD(P)H-quinone oxidoreductase subunit H	NuoD NADH dehydrognease I, subunit D	NADH dehydrogenase subunit	hypothetical NADH-plastoquinone oxidoreductase subunit 4	NAD(P)H-quinone oxidoreductase subunit H	NADH-quinone oxidoreductase subunit C/D	NADH-quinone oxidoreductase subunit 4	NADH-quinone oxidoreductase subunit C/D	NADH-quinone oxidoreductase subunit C/D	NADH dehydrogenase I chain C/D	NADH dehydrogenase I, C/D subunits	NADH-quinone oxidoreductase subunit C/D	NADH-quinone oxidoreductase subunit D 1	(NADH-UBIQUINONE OXIDOREDUCTASE CHAIN D 2); glimmer prediction; identical to NADH  I CHAIN D 2 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN D 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56908, possibly in operon with NuoA2, NuoB2, NuoC2, NuoE2, NuoF2, NuoG2 NuoD2 NADH  I CHAIN D	NADH-quinone oxidoreductase subunit C/D	NADH-quinone oxidoreductase subunit C/D	NADH-quinone oxidoreductase subunit C/D	NADH-quinone oxidoreductase subunit C/D	NADH-quinone oxidoreductase subunit C/D	Residues 1 to 600 of 600 are 99 pct identical to residues 1 to 600 of a 600 aa protein from Escherichia coli K12 ref: NP_416789.1 NADH dehydrogenase I chain C, D	NADH-quinone oxidoreductase subunit C/D	membrane bound hydrogenase, NiFe-hydrogenase large subunit 2	NADH-quinone oxidoreductase subunit C/D	
ECOLI02218	NADH-quinone oxidoreductase subunit B	NADH-ubiquinone oxidoreductase subunit	NADH dehydrogenase subunit B	F(420)H(2) dehydrogenase, subunit FpoB	NAD(P)H-quinone oxidoreductase subunit K 2	NuoB homolog	NADH-quinone oxidoreductase subunit B	hypothetical NADH-ubiquinone oxidoreductase subunit K	NAD(P)H-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase subunit B	NAD(P)H-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase chain B	NADH dehydrogenase I, B subunit	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase subunit B 2	(NADH-UBIQUINONE OXIDOREDUCTASE CHAIN B 2); glimmer prediction; identical to NADH  I CHAIN B 2 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN B 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56897, possibly in operon with NuoA2, NuoC2, NuoD2, NuoE2, NuoF2, NuoG2 NuoB2 NADH  I CHAIN B	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase subunit B	NADH dehydrogenase subunit	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase subunit B 2	NADH-quinone oxidoreductase subunit B	NADH-quinone oxidoreductase subunit B	
ECOLI02219	NADH-quinone oxidoreductase subunit A	NAD(P)H-quinone oxidoreductase subunit 3	NADH dehydrogenase/oxidoreductase-like protein	NADH-quinone oxidoreductase subunit	NAD(P)H-quinone oxidoreductase subunit 3	NAD(P)H-quinone oxidoreductase subunit 3	NADH-quinone oxidoreductase subunit A 2	NADH-quinone oxidoreductase subunit	NADH-quinone oxidoreductase subunit	NADH-quinone oxidoreductase subunit A	NAD(P)H-quinone oxidoreductase subunit 3	NADH-quinone oxidoreductase chain A	NAD(P)H-quinone oxidoreductase chain 3	NADH-quinone oxidoreductase subunit	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A	NADH dehydrogenase subunit 3	NADH-quinone oxidoreductase subunit	NADH-quinone oxidoreductase subunit	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A	SCD16A.21c, nuoA, NADH dehydrogenase subunit, len: 119 aa; similar to many e.g. TR:P95181 (EMBL:Z83867) NuoA, NADH dehydrogenase subunit from Mycobacterium tuberculosis (128 aa) fasta scores; opt: 405, z-score: 534.2, E(): 2e-22, (68.8% identity in 128 aa overlap). Contains Pfam match to entry PF00507 oxidored_q4, NADH-ubiquinone/plastoquinone oxidoreductase, chain 3.  Contains possible hydrophobic membrane spanning regions NuoA, NADH dehydrogenase subunit	Residues 1 to 147 of 147 are 100 pct identical to residues 1 to 147 of a 147 aa protein from Escherichia coli O157:H7 ref: NP_311199.1 NADH dehydrogenase I chain A	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A	NADH dehydrogenase subunit 3	

ECOLI02220	Probable HTH-type transcriptional regulator lrhA	NADH dehydrogenase operon transcriptional regulator	Probable transcriptional regulator lrhA	Putative LysR-family transcriptional regulator	LysR-family transcriptional regulator of motility and virulence	Transcriptional regulator, LysR family	Putative LysR-family transcriptional regulator	Probable HTH-type transcriptional regulator lrhA	Residues 1 to 312 of 312 are 99 pct identical to residues 2 to 313 of a 313 aa protein from Escherichia coli dbj: BAA16124.1 probable transcriptional regulator LrhA.	LysR-family transcriptional regulatory protein	Transcriptional regulator LrhA	IPR000169: Eukaryotic thiol (cysteine) protease; IPR000847: Bacterial regulatory protein LysR, HTH motif NADH dehydrogenase transcriptional repressor (LysR family)	similar to Salmonella typhi CT18 NADH dehydrogenase operon transcriptional regulator NADH dehydrogenase operon transcriptional regulator	LysR-family transcriptional regulatory protein	LysR family NADH dehydrogenase transcriptional repressor	transcriptional regulator lysR family	Code: K; COG: COG0583 NADH dehydrogenase transcriptional regulator, LysR family	LysR family; Code: K; COG: COG0583 NADH dehydrogenase transcriptional regulator	transcriptional regulator, LysR family	Code: K; COG: COG0583 NADH dehydrogenase transcriptional regulator, LysR family	Probable transcriptional regulator lrhA	LysR-family transcriptional regulatory protein	Probable transcriptional regulator LrhA	transcriptional regulator, LysR family	LysR-family transcriptional regulatory protein	Transcriptional regulator, LysR family	LysR-family transcriptional regulatory protein	NADH dehydrogenase transcriptional regulator, LysR family Code: K; COG: COG0583	transcriptional regulator, LysR family	
ECOLI02221	Uncharacterized aminotransferase yfbQ	Aminotransferase	Uncharacterized aminotransferase HI0286	401aa long hypothetical aspartate aminotransferase	Putative aspartate aminotransferase	Probable aminotransferase Hi0286	Aminotransferase	Aat alanine aminotransferase	Alanine aminotransferase	Aspartate aminotransferase, putative	Aminotransferase, class I	Putative uncharacterized protein	Probable aminotransferase	Putative aspartate aminotransferase	Putative aminotransferase	Probable aminotransferase	PLP-dependent aminotransferases	Putative aminotransferase	putative aspartate aminotransferase	Probable aminotransferase yfbQ	Aminotransferase, class I	Aspartate aminotransferase, putative	Aspartate aminotransferase, putative	Probable aminotransferase	Aminotransferase, classes I and II	Putative aminotransferase	Putative aminotransferase	Putative aminotransferase	Putative aspartate aminotransferase	
ECOLI02222	5'-nucleotidase yfbR	UPF0207 protein VV1113	UPF0207 protein yfbR	Lmo2491 protein	putative hydrolase of HD superfamily	5'-nucleotidase yfbR	UPF0207 protein VC_1978	UPF0207 protein SO_2484	UPF0207 protein ECA3034	UPF0207 protein VP0926	5'-nucleotidase yfbR	Lin2634 protein	Residues 1 to 199 of 199 are 99 pct identical to residues 1 to 199 of a 199 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288865.1 putative alpha helix protein	UPF0207 protein YPO2559/y1627/YP_2370	Putative uncharacterized protein	UPF0207 protein plu3092	HD superfamily hydrolase	HD domain protein, putative	Hypothetical protein SE0538	putative hydrolase of HD superfamily	similar to Salmonella typhi CT18 putative oxetanocin A biosynthetic enzyme putative oxetanocin A biosynthetic enzyme	conserved hypothetical protein	UPF0207 protein YPTB2590	Ortholog of S. aureus MRSA252 (BX571856) SAR0810 putative phosphohydrolase	conserved hypothetical protein	identified by similarity to OMNI:NTL01LI2617 HD domain protein	HD domain protein	UPF0207 protein yfbR	identified by similarity to GP:28805913 conserved hypothetical protein	
ECOLI02223	Uncharacterized transporter yfbS	Putative uncharacterized protein	Putative Na+/sulphate transporter	Cation transporter	Putative uncharacterized protein	Probable sodium:sulfate symporter	Putative sodium/sulphate transporter	Putative transporter	Hypothetical protein yfbS	Putative sodium/sulphate transporter	Uncharacterized transporter yfbS	Residues 1 to 610 of 610 are 99 pct identical to residues 1 to 610 of a 610 aa protein from Escherichia coli O157:H7 ref: NP_311203.1 putative transport protein	Putative ion transport protein	Similar to putative transport protein YfbS of Escherichia coli	IPR001898: Sodium/sulphate symporter putative response regulator	similar to Salmonella typhi CT18 putative sodium/sulphate transporter putative sodium/sulphate transporter	Probable sodium:sulfate symporter	Identical to previously sequenced Bacteroides fragilis putative transporter trnA SWALL:Q93QV4 (EMBL:AF189282) (621 aa) fasta scores: E(): 0, 100% id in 621 aa, and similar to Bacteroides thetaiotaomicron putative Na+/sulphate transporter BT0539 SWALL:AAO75646 (EMBL:AE016928) (619 aa) fasta scores: E(): 1.9e-169, 71.65% id in 621 aa, and to Pseudomonas aeruginosa probable sodium:sulfate symporter pa3839 SWALL:Q9HXG5 (EMBL:AE004801) (610 aa) fasta scores: E(): 8.5e-39, 36.77% id in 620 aa, and to Photorhabdus temperata YfbS SWALL:Q8GLH4 (EMBL:AY137386) (585 aa) fasta scores: E(): 6.8e-38, 35.25% id in 607 aa putative transmembrane sodium/sulfate transporter	Di- and tricarboxylate transporters CitT protein	Transporter, sodium/sulfate symporter family	Putative response regulator	possible sodium/sulphate transporter	Cation transporter	Code: P; COG: COG0471 putative transport protein	Code: P; COG: COG0471 putative transport protein	putative transporter identified by similarity to SP:P72958	Code: P; COG: COG0471 putative transport protein	putative transmembrane transporter protein similarity:fasta; with=UniProt:Q5D1Y1_9GAMM (EMBL:AY918062); Halomonas maura.; epsD; EpsD.; length=592; id 28.811; 597 aa overlap; query 1-579; subject 6-590 similarity:fasta; with=UniProt:Q8U7H4_AGRT5 (EMBL:AE008239); Agrobacterium tumefaciens (strain C58/ATCC 33970).; Transporter (AGR_L_788p).; length=590; id 32.886; 596 aa overlap; query 1-579; subject 1-587	Putative uncharacterized protein	
ECOLI02224	Phosphatase yfbT	conserved hypothetical protein;	highly similar to sp|P41277 Saccharomyces cerevisiae YIL053w RHR2 DL-glycerol phosphatase, start by similarity	Putative uncharacterized protein	Hydrolase	Phosphatase Ta0845	Putative uncharacterized protein	Putative uncharacterized protein CPE0275	Probable hydrolase	Putative uncharacterized protein VV2184	Beta-phosphoglucomutase-related protein	Haloacid dehalogenase-like hydrolase	Putative phosphatase	Protein yfbT	identified by match to TIGR protein family HMM TIGR01662 hydrolase, haloacid dehalogenase-like family	Putative haloacid dehalogenase-like hydrolase	Phosphoglycolate phosphatase	Product confidence : putative Gene name confidence : hypothetical putative 2-deoxyglucose-6-phosphate phosphatase protein	Hydrolase, haloacid dehalogenase-like family	Haloacid dehalogenase-like hydrolase	GLYCEROL-3-PHOSPHATASE 1	Putative phosphatase	hypothetical protein, putative hydrolase	Phosphatase	Beta-phosphoglucomutase	Residues 1 to 216 of 216 are 99 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288867.1 putative phosphatase	Putative haloacid dehalogenase-like hydrolase	phosphoglycolate phosphatase	IPR005833: Haloacid dehalogenase/epoxide hydrolase putative phosphatase	
ECOLI02225	UPF0304 protein yfbU	UPF0304 protein PM1500	UPF0304 protein VV2347	UPF0304 protein yfbU	conserved hypothetical protein	UPF0304 protein yfbU	UPF0304 protein VC_1871	UPF0304 protein ECA3037	UPF0304 protein VP0990	UPF0304 protein yfbU	UPF0304 protein VV1_2093	Residues 1 to 164 of 164 are 98 pct identical to residues 1 to 164 of a 164 aa protein YFBU_ECOLI sp: P76492 Protein yfbU	UPF0304 protein YPO2563/y1624/YP_2374	IPR005587: YfbU putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0304 protein YPTB2594	protein YbfU	Uncharacterized ACR Hypothetical protein	UPF0304 protein yfbU	Code: S; COG: COG3013 conserved hypothetical protein	Code: S; COG: COG3013 conserved hypothetical protein	Code: S; COG: COG3013; orf conserved hypothetical protein	UPF0304 protein yfbU	Hypothetical protein	Protein YfbU	Hypothetical protein	Hypothetical protein	YfbU domain protein identified by match to protein family HMM PF03887	Hypothetical protein	
ECOLI02226	UPF0208 membrane protein yfbV	UPF0208 membrane protein PM0703	UPF0208 membrane protein VV2132	UPF0208 membrane protein yfbV	conserved hypothetical protein	UPF0208 membrane protein yfbV	UPF0208 membrane protein VC_1099	UPF0208 membrane protein SO_2914	UPF0208 membrane protein ECA3038	UPF0208 membrane protein VP2081	UPF0208 membrane protein yfbV	UPF0208 membrane protein VV1_2222	Residues 1 to 151 of 151 are 99 pct identical to residues 1 to 151 of a 151 aa protein from Escherichia coli K12 ref: NP_416798.1 orf, conserved hypothetical protein	UPF0208 membrane protein YPO2564/y1623/YP_2375	UPF0208 membrane protein plu3094	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0208 membrane protein YPTB2595	hypothetical protein	Similar to: HI1205, YC05_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved protein	UPF0208 membrane protein yfbV	identified by similarity to SP:Q9KT06 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3092 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function; Product type m : membrane component conserved protein of unknown function	Code: S; COG: COG3092 conserved hypothetical protein	conserved hypothetical protein	
ECOLI02227	Acetate kinase	Acetate kinase	Acetate kinase	Acetate kinase	Acetate kinase	Acetate kinase	Acetate kinase 1	Acetate kinase	Acetate kinase	Acetate kinase 1	Acetate kinase	Acetate kinase	Acetate kinase	Acetate kinase	putative acetate kinase	Acetate kinase	Acetate kinase 1	Acetate kinase	Acetate kinase	Acetate kinase	Acetate kinase 1	Acetate kinase	Acetate kinase	Acetate kinase	Acetate kinase	SC8F4.28c, ackA, acetate kinase, len: 407 aa; strongly similar to many e.g. SW:P77845 (ACKA_CORGL) AckA, acetate kinase from Corynebacterium glutamicum (Brevibacterium flavum) (397 aa) fasta scores; opt: 1333, z-score: 1504.1, E(): 0, 52.8% identity in 388 aa overlap.  Contains Pfam match to entry PF00871 Acetate_kinase, Acetokinase family and Prosite match to PS01075 Acetate and butyrate kinases family signature 1. acetate kinase	Acetate kinase 1	Residues 1 to 353 of 353 are 99 pct identical to residues 48 to 400 of a 400 aa protein from Escherichia coli O157:H7 ref: NP_311207.1 acetate kinase	Acetate kinase	
ECOLI02228	Phosphate acetyltransferase	Phosphate acetyltransferase	Pta	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Probable phosphate acetyltransferase	putative phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphotransacetylase	Phosphate acetyltransferase	Phosphate acetyltransferase	Residues 1 to 714 of 714 are 99 pct identical to residues 1 to 714 of a 714 aa protein from Escherichia coli K12 ref: NP_416800.1 phosphotransacetylase	Phosphate acetyltransferase	Phosphate acetyl/butaryl transferase:Phosphate acetyltransferase	Pta protein	Phosphate acetyltransferase	Phosphate acetyltransferase	phosphotransacetylase	similar to Salmonella typhi CT18 phosphate acetyltransferase phosphate acetyltransferase	Phosphate acetyltransferase	
ECOLI02229	Uncharacterized protein yfcC	Putative uncharacterized protein	Predicted membrane protein	Putative membrane protein	Putative transporter	Short-chain fatty acids transporter	Putative membrane protein	Hypothetical protein yfcC	C4-dicarboxylate anaerobic carrier family protein	Putative Mg2+/citrate transporter	Putative S-transferase	Putative S-transferase	CDS_ID OB0693 hypothetical protein	BH2308 protein	Predicted membrane protein	Residues 1 to 492 of 492 are 99 pct identical to residues 15 to 506 of a 506 aa protein YFCC_ECOLI sp: P39263 orf, conserved hypothetical protein	IPR006162: Phosphopantetheine attachment site putative integral membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Similar to Streptococcus gordonii arginine-ornithine antiporter ArcD SWALL:Q8GND2 (EMBL:AF534569) (504 aa) fasta scores: E(): 3.2e-18, 30.35% id in 537 aa, and to Escherichia coli O6 hypothetical protein c5347 SWALL:Q8FAE2 (EMBL:AE016771) (482 aa) fasta scores: E(): 3.3e-25, 30.49% id in 528 aa, and to Salmonella typhi putative membrane protein STY4802 or t4498 SWALL:Q8Z128 (EMBL:AL627283) (467 aa) fasta scores: E(): 4.2e-25, 31.19% id in 529 aa putative C4-dicarboxylate anaerobic carrier	Putative integral membrane protein	conserved hypothetical protein; possible transporter	Code: S; COG: COG1288 putative S-transferase	Putative transport protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function ; putative C4-dicarboxylate anaerobic carrier family	Code: S; COG: COG1288 putative S-transferase	C4-dicarboxylate anaerobic carrier	Code: S; COG: COG1288 putative S-transferase	C4-dicarboxylate anaerobic carrier family protein identified by match to protein family HMM PF03606	Hypothetical membrane protein YfcC	
ECOLI02230	Uncharacterized Nudix hydrolase yfcD	Uncharacterized Nudix hydrolase DR_0079	Uncharacterized Nudix hydrolase yfcD	Putative Nudix hydrolase yfcD	Isopentenyl-diphosphate delta-isomerase	Putative NUDIX hydrolase	MutT/nudix family protein	Uncharacterized Nudix hydrolase yfcD	SCI30A.07, possible NTP pyrophosphohydrolase, len: 181 aa; similar to many e.g. TR:Q53738 (EMBL:X92429) from the puromycin biosynthetic pathway of Streptomyces alboniger (152 aa) fasta scores; opt: 170, z-score: 226.2, E(): 2.9e-05, (35.7% identity in 129 aa overlap). Contains Pfam match to entry PF00293 mutT, Bacterial mutT protein. putative NTP pyrophosphohydrolase	Residues 1 to 180 of 180 are 99 pct identical to residues 1 to 180 of a 180 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288873.1 putative regulator	Uncharacterized Nudix hydrolase YPO2781/y1614/YP_2383	Similar to unknown protein YfcD of Escherichia coli	IPR002667: Isopentenyl-diphosphate delta-isomerase putative NTP pyrophosphohydrolase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	IPP isomerase type 1 family protein	Uncharacterized Nudix hydrolase yfcD	Isopentenyl-diphosphate delta-isomerase	identified by match to protein family HMM PF00293 mutT/nudix family protein	identified by similarity to SP:Q46822; match to protein family HMM PF00293 isopentenyl-diphosphate delta-isomerase, putative	NUDIX hydrolase	Code: LR; COG: COG0494 putative regulator	Mut/nudix family protein, putative isopentenyl- diphosphate isomerase	Code: LR; COG: COG0494 putative regulator	conserved hypothetical protein	NUDIX hydrolase	NUDIX hydrolase	Code: LR; COG: COG0494 putative regulator	Putative uncharacterized protein	
ECOLI02231	Phosphodiesterase yfcE	Predicted phosphoesterase	Putative uncharacterized protein STY2577	hypothetical phosphoesterase	Phosphodiesterase yfcE	Phosphoesterase, putative	Putative uncharacterized protein	Putative phosphoesterase	Putative phosphoesterase	Putative uncharacterized protein VP0816	Phosphodiesterase yfcE	Predicted phosphoesterase	Predicted phosphoesterase	Predicted phosphoesterase	Residues 1 to 184 of 184 are 97 pct identical to residues 1 to 184 of a 184 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288874.1 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR000979: Protein of unknown function UPF0025; IPR004843: Metallo-phosphoesterase putative phosphoesterase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	putative phosphoesterase	Putative phosphoesterase	Code: R; COG: COG0622 conserved hypothetical protein	identified by similarity to GB:AAM23945.1; match to protein family HMM PF00149; match to protein family HMM TIGR00040 putative phosphoesterase	Code: R; COG: COG0622 conserved hypothetical protein	Code: R; COG: COG0622; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yfcE	Protein of unknown function UPF0025	
ECOLI02232	Uncharacterized GST-like protein yfcF	Hypothetical GST-like protein yfcF	Probable glutathione S-transferase	Probable glutathione S-transferase	Probable glutathione S-transferase	Putative uncharacterized protein yfcF	Residues 1 to 214 of 214 are 99 pct identical to residues 1 to 214 of a 214 aa protein from Escherichia coli K12 ref: NP_416804.1 orf, conserved hypothetical protein	Probable glutathione S-transferase	IPR004045: Glutathione S-transferase, N-terminal putataive glutathione-S-transferase	similar to Salmonella typhi CT18 putative glutathione-S transferase putative glutathione-S transferase	Putative glutathione-S-transferase	identified by match to protein family HMM PF02798 glutathione S-transferase domain protein	Code: O; COG: COG0625 conserved hypothetical protein	Code: O; COG: COG0625 conserved hypothetical protein	probable glutathione S-transferase	Glutathione S-transferase-like	Glutathione S-transferase-like	Hypothetical GST-like protein YfcF	Putative uncharacterized protein yfcF	Putative transferase	Glutathione S-transferase-like	Glutathione S-transferase-like protein	conserved hypothetical protein Code: O; COG: COG0625	putative glutathione S-transferase	Glutathione S-transferase, N-terminal domain	Putative glutathione S-transferase	Putative uncharacterized protein	Glutathione S-transferase domain protein	Glutathione S-transferase domain	
ECOLI02233	Uncharacterized GST-like protein yfcG	Glutathione S-transferase	Glutathione S-transferase	Probable glutathione S-transferase	Putative glutathione-S transferase	All1124 protein	Putative glutathione S-transferase-like protein	Hypothetical GST-like protein yccG	Putative glutathione transferase	Putative glutathione-S transferase	probable glutathione S-transferase	Putative S-transferase	Putative glutathione S-transferase	Glutathione S-transferase	Residues 1 to 215 of 215 are 99 pct identical to residues 1 to 215 of a 215 aa protein from Escherichia coli K12 ref: NP_416805.1 putative S-transferase	Complete genome; segment 11/17	Similar to glutathione S-transferase hypothetical protein	conserved gene glutathione S-transferase	Similar to glutathione S-transferase hypothetical protein	Glutathione S-transferase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark glutathione S-transferase	IPR004045: Glutathione S-transferase, N-terminal; IPR004046: Glutathione S-transferase, C-terminal putative glutathione S-transferase	similar to Salmonella typhi CT18 putative glutathione-S transferase putative glutathione-S transferase	Glutathione S-transferase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative glutathione S-transferase	Putative glutathione S-transferase	putative glutathione-S-transferase-related protein	glutathione S-transferase	identified by similarity to SP:P77526; match to protein family HMM PF00043; match to protein family HMM PF02798 glutathione S-transferase	
ECOLI02234	D-erythro-7,8-dihydroneopterin triphosphate epimerase	D-erythro-7,8-dihydroneopterin triphosphate epimerase	D-erythro-7,8-dihydroneopterin triphosphate epimerase	D-erythro-7,8-dihydroneopterin triphosphate epimerase	Dihydroneopterin aldolase	D-erythro-7,8-dihydroneopterin triphosphate epimerase	Residues 1 to 120 of 120 are 100 pct identical to residues 1 to 120 of a 120 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288877.1 D-erythro-7,8-dihydroneopterin tri P epimerase	Dihydroneopterin aldolase	COG1539 conserved hypothetical protein	identified by similarity to SP:P80449; match to protein family HMM PF02152; match to protein family HMM TIGR00526 D-erythro-7,8-dihydroneopterin triphosphate epimerase	identified by match to protein family HMM PF02152; match to protein family HMM TIGR00526 dihydroneopterin aldolase	identified by match to protein family HMM PF02152; match to protein family HMM TIGR00526 dihydroneopterin aldolase	Dihydroneopterin aldolase	Code: H; COG: COG1539 D-erythro-7,8-dihydroneopterin tri P epimerase	Code: H; COG: COG1539 D-erythro-7,8-dihydroneopterin tri P epimerase	dihydroneopterin aldolase	Dihydroneopterin aldolase	Code: H; COG: COG1539 D-erythro-7,8-dihydroneopterin tri P epimerase	D-erythro-7,8-dihydroneopterin triphosphate epimerase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	D-erythro-7,8-dihydroneopterin triphosphate epimerase	dihydroneopterin aldolase PFAM: dihydroneopterin aldolase KEGG: pfl:PFL_0948 dihydroneopterin aldolase	dihydroneopterin aldolase TIGRFAM: dihydroneopterin aldolase KEGG: mca:MCA2988 dihydroneopterin aldolase	dihydroneopterin aldolase PFAM: dihydroneopterin aldolase KEGG: sfr:Sfri_2558 dihydroneopterin aldolase	dihydroneopterin aldolase PFAM: dihydroneopterin aldolase KEGG: son:SO2921 D-erythro-7,8-dihydroneopterin triphosphate epimerase	D-erythro-7,8-dihydroneopterin triphosphate epimerase	
ECOLI02235	UPF0105 protein yfcH	Cell division inhibitor	Epimerase family protein slr1223	Cell division inhibitor	Epimerase family protein HI1208	Putative uncharacterized protein TVG0493451	Putative sugar nucleotide epimerase	Putative uncharacterized protein	Putative NAD dependent epimerase/dehydratase family	Putative uncharacterized protein Ta1272	Putative cell division inhibitor	Putative uncharacterized protein	Putative uncharacterized protein	Predicted nucleoside-diphosphate sugar epimerase	Putative uncharacterized protein	Putative uncharacterized protein STY2580	Cell division inhibitor	Cell division inhibitor-like protein	Putative uncharacterized protein	Lmo1694 protein	Epimerase family protein ML0860	Putative sugar nucleotide epimerase	Cell division inhibitor	Possible epimerase, NAD dependent epimerase family protein	hypothetical sugar nucleotide epimerase	Hypothetical protein yfcH	identified by match to protein family HMM TIGR01777 cell division inhibitor-like protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02236	Uncharacterized protein yfcI	Putative uncharacterized protein yfcI	Residues 1 to 296 of 296 are 98 pct identical to residues 1 to 296 of a 296 aa protein from Escherichia coli K12 ref: NP_416808.1 orf, conserved hypothetical protein	Code: S; COG: COG5464; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfcI	conserved hypothetical protein Code: S; COG: COG5464	conserved hypothetical protein	Putative uncharacterized protein	Putative transposase	Putative transposase YhgA family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative transposase	Putative transposase	Putative transposase	Putative transposase	Putative transposase	Predicted protein	Putative transposase	YfcI protein	Putative transposase	Conserved protein	conserved predicted protein	Putative transposase YhgA family protein	
ECOLI02237	Histidine transport ATP-binding protein hisP	Histidine transport ATP-binding protein	putative ABC-type histidine transport system, ATPase component	Histidine transport ATP-binding protein hisP	Amino acid ABC transporter, ATP-binding protein	Histidine ABC transporter ATP-binding protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN	ATP-binding component of histidine transport	Residues 1 to 257 of 257 are 100 pct identical to residues 1 to 257 of a 257 aa protein from Escherichia coli O157:H7 ref: NP_311217.1 ATP-binding component of histidine transport	Histidine transport ATP-binding protein HisP	ATP-binding component of histidine transport	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase ABC superfamily (atp_bind), histidine and lysine/arginine/ornithine transport protein	similar to Salmonella typhi CT18 histidine transport ATP-binding protein histidine transport ATP-binding protein	ABC histidine transporter, ATP-binding subunit HisP	Histidine transport ATP-binding protein hisP	Code: E; COG: COG4598 ATP-binding component of histidine transport	Code: E; COG: COG4598 ATP-binding component of histidine transport	putative histidine ABC transporter ATP-binding component HisP	ABC transporter related	ABC-type histidine transport system, ATPase component COG4598	Code: E; COG: COG4598 ATP-binding component of histidine transport	Histidine transport ATP-binding protein HisP	Histidine transport ATP-binding protein HisP	ATP-binding component of histidine transport	ABC transporter related	ABC transporter related	Histidine transport ATP-binding protein HisP	Histidine transport ATP-binding protein HisP	Histidine ABC transporter, ATP-binding protein	
ECOLI02238	Histidine transport system permease protein hisM	Histidine transport system permease protein hisM	Histidine transport system permease protein hisM	Histidine ABC transporter permease protein	Amino acid ABC transporter, permease protein	Histidine transport system permease protein hisM	Residues 1 to 238 of 238 are 99 pct identical to residues 1 to 238 of a 238 aa protein from Escherichia coli O157:H7 ref: NP_311218.1 histidine transport system membrane protein M	Histidine transport system permease protein HisM	identified by similarity to SP:P02912; match to protein family HMM PF00528; match to protein family HMM TIGR01726 His/Glu/Gln/Arg/opine family ABC transporter, permease protein	Histidine transport system membrane protein M	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane),histidine and lysine/arginine/ornithine transport protein	similar to Salmonella typhi CT18 histidine transport system permease histidine transport system permease	ABC histidine transporter, permease subunit HisM	Histidine transport system permease protein hisM	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 amino acid ABC transporter, permease protein	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Code: E; COG: COG4160 histidine transport, membrane protein M	ABC basic amino acid transporter, inner membrane subunit	Code: E; COG: COG4160 histidine transport, membrane protein M	binding-protein-dependent transport systems inner membrane component	Code: E; COG: COG4160 histidine transport, membrane protein M	Histidine transport system permease protein HisM	Histidine transport system permease protein HisM	Histidine transport system membrane protein M	polar amino acid ABC transporter, inner membrane subunit TIGRFAM: polar amino acid ABC transporter, inner membrane subunit PFAM: binding-protein-dependent transport systems inner membrane component KEGG: rsp:RSP_0374 ABC basic amino acid transporter, inner membrane subunit	histidine ABC transporter, permease protein	Histidine transport system permease protein HisM	Histidine transport system permease protein HisM	histidine ABC transporter, inner membrane permease	
ECOLI02239	Histidine transport system permease protein hisQ	ABC-type arginine transport system, permease component	Histidine transport system permease protein hisQ	Histidine transport system permease protein hisQ	Amino acid ABC transporter, permease protein	Histidine ABC transporter permease protein	Histidine ABC transporter, permease protein	Amino acid ABC transporter, permease protein	Histidine transport system permease protein	ABC-type arginine transport system, permease component	Residues 1 to 228 of 228 are 99 pct identical to residues 1 to 228 of a 228 aa protein from Escherichia coli K12 ref: NP_416811.1 histidine transport system permease protein	Histidine transport system permease protein HisQ	Histidine transport system permease protein	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane),histidine and lysine/arginine/ornithine transport system	similar to Salmonella typhi CT18 histidine transport system permease protein histidine transport system permease protein	ABC histidine transporter, permease subunit HisQ	Histidine transport system permease protein hisQ	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 amino acid ABC transporter, permease protein	Code: E; COG: COG4215 histidine transport system permease protein	Code: E; COG: COG4215 histidine transport system permease protein	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	ABC-type arginine transport system, permease component COG4215	Code: E; COG: COG4215 histidine transport system permease protein	binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component: (1.2e-11) KEGG: sil:SPO1305 ABC transporter, permease protein, HisMQ family, ev=1e-128, 72% identity	Histidine transport system permease protein HisQ	Histidine transport system permease protein hisQ	polar amino acid ABC transporter, inner membrane subunit TIGRFAM: polar amino acid ABC transporter, inner membrane subunit PFAM: binding-protein-dependent transport systems inner membrane component KEGG: csa:Csal_2782 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	Histidine transport system permease protein HisQ	
ECOLI02240	Histidine-binding periplasmic protein	Histidine-binding periplasmic protein	Lysine-arginine-ornithine transport system, binding exported protein	Histidine-binding periplasmic protein precursor	Histidine-binding periplasmic protein	Amino acid ABC transporter, periplasmic amino acid-binding protein	Histidine-binding periplasmic protein	similar to AL391763-22|CAC05959.1| percent identity: 30 in 303 aa putative secreted protein	Residues 1 to 250 of 264 are 99 pct identical to residues 1 to 250 of a 260 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288883.1 histidine-binding periplasmic protein of high-affinity histidine transport system	Histidine-binding periplasmic protein	Subunit of the lysine/arginine/ornithine transporter	IPR001311: Solute-binding protein/glutamate receptor; IPR001638: Bacterial extracellular solute-binding protein, family 3 ABC superfamily (bind_prot), histidine transport protein	similar to Salmonella typhi CT18 histidine-binding periplasmic protein histidine-binding periplasmic protein	ABC tranporter, periplasmic histidine-binding protein hisJ	Histidine-binding periplasmic protein	identified by match to protein family HMM PF00497 basic amino acid ABC transporter, periplasmic basic amino acid-binding protein	Code: ET; COG: COG0834 histidine-binding periplasmic protein of high-affinity histidine transport system	Code: ET; COG: COG0834 histidine-binding periplasmic protein of high-affinity histidine transport system	polar amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein identified by match to protein family HMM PF00497	Code: ET; COG: COG0834 histidine-binding periplasmic protein of high-affinity histidine transport system	putative substrate-binding component of ABC transporter similarity:fasta; SWALL:Q7CX84 (EMBL:AE008151); Agrobacterium tumefaciens str. C58; Agr_c_4294p; length 256 aa; 255 aa overlap; query 17-271 aa; subject 1-255 aa	lysine-arginine-ornithine transport system, binding exported protein identified by match to protein family HMM PF00497; match to protein family HMM TIGR01096	Histidine-binding periplasmic protein	Histidine-binding periplasmic protein precursor	Histidine-binding periplasmic protein of high- affinity histidine transport system	Histidine-binding periplasmic protein precursor	ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein	ABC Lysine-arginine-ornithine transporter periplasmic ligand binding protein	histidine-binding periplasmic protein of high-affinity histidine transport system Code: ET; COG: COG0834	
ECOLI02241	Lysine-arginine-ornithine-binding periplasmic protein	Lysine-, arginine-, ornithine-binding periplasmic protein	Residues 1 to 260 of 260 are 98 pct identical to residues 1 to 260 of a 260 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288884.1 lysine-, arginine-, ornithine-binding periplasmic protein	IPR001311: Solute-binding protein/glutamate receptor; IPR001638: Bacterial extracellular solute-binding protein, family 3 ABC superfamily (bind_prot), lysine/arginine/ornithine transport protein	similar to Salmonella typhi CT18 lysine-arginine-ornithine-binding periplasmic protein precursor lysine-arginine-ornithine-binding periplasmic protein precursor	Lysine-arginine-ornithine-binding periplasmic protein	Code: ET; COG: COG0834 lysine-, arginine-, ornithine-binding periplasmic protein	Code: ET; COG: COG0834 lysine-, arginine-, ornithine-binding periplasmic protein	extracellular solute-binding protein, family 3	extracellular solute-binding protein, family 3	Code: ET; COG: COG0834 lysine-, arginine-, ornithine-binding periplasmic protein	Lysine-arginine-ornithine-binding periplasmic protein	Lysine-arginine-ornithine-binding periplasmic protein	Extracellular solute-binding protein, family 3	ABC-type amino acid transporter, periplasmic binding protein	lysine-, arginine-, ornithine-binding periplasmic protein Code: ET; COG: COG0834	lysine/arginine/ornithine transporter subunit	CjaC protein	Cationic amino acid ABC transporter, periplasmic binding protein precursor	Extracellular solute-binding protein, family 3 precursor	Lysine-, arginine-, ornithine-binding periplasmic protein	Putative uncharacterized protein	Lysine-arginine-ornithine-binding periplasmic protein	Lysine/arginine/ornithine transporter subunit; periplasmic-binding component of ABC superfamily	Lysine-arginine-ornithine-binding periplasmic protein	Cationic amino acid ABC transporter, periplasmic binding protein precursor	Lysine-arginine-ornithine-binding periplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02242	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	Probable aromatic acid decarboxylase	Vanillate decarboxylase protein	Phenylacrylic acid decarboxylase homolog	Probable aromatic acid decarboxylase	Phenylacrylic acid decarboxylase	Probable aromatic acid decarboxylase	Probable aromatic acid decarboxylase	Probable aromatic acid decarboxylase	Probable aromatic acid decarboxylase	3-polyprenyl-4-hydroxybenzoate decarboxylase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	identified by match to PFAM protein family HMM PF03033 phenylacrylic acid decarboxylase	Probable aromatic acid decarboxylase	Probable aromatic acid decarboxylase	Flavoprotein:Phenylacrylic acid decarboxylase, 3- octaprenyl-4-hydroxybenzoate carboxy-lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	hypothetical 3-octaprenyl-4-hydroxybenzoate carboxy-lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	Probable aromatic acid decarboxylase	UbiX	Probable aromatic acid decarboxylase	Probable aromatic acid decarboxylase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	Putative aromatic acid decarboxylase	Phenylacrylic acid decarboxylase, 3-octaprenyl-4- hydroxybenzoate carboxy-lyase	
ECOLI02243	Amidophosphoribosyltransferase	Phosphoribosylpyrophosphate amidotransferase (PRPPAT; amidophosphoribosyltransferase), catalyzes first step of the 'de novo' purine nucleotide biosynthetic pathway. [Source:SGD;Acc:S000004915]	similar to sp|Q12698 Saccharomyces kluyveri Amidophosphoribosyltransferase (EC 2.4.2.14)	Amidophosphoribosyltransferase	Amidophosphoribosyltransferase [Source:GeneDB_Spombe;Acc:SPAC4D7.08c]	highly similar to sp|P04046 Saccharomyces cerevisiae YMR300c ADE4 amidophosphoribosyltransferase singleton, start by similarity	Amidophosphoribosyltransferase	Amidophosphoribosyltransferase	Amidophosphoribosyltransferase	Amidophosphoribosyltransferase	Amidophosphoribosyltransferase	Amidophosphoribosyltransferase	Amidophosphoribosyltransferase	Probable amidophosphoribosyltransferase	Amidophosphoribosyltransferase	highly similar to uniprot|P04046 Saccharomyces cerevisiae YMR300c ADE4 amidophosphoribosyltransferase;	Amidophosphoribosyl-pyrophosphate amidotransferase	DEHA2F26554p;highly similar to uniprot|P04046 Saccharomyces cerevisiae YMR300C ADE4 Phosphoribosylpyrophosphate amidotransferase (PRPPAT;	Amidophosphoribosyltransferase	Glutamine phosphoribosylpyrophosphate amidotransferase	Amidophosphoribosyltransferase precursor	Amidophosphoribosyltransferase	Amidophosphoribosyltransferase	Putative phosphoribosylpyrophosphate amidotransferase	Amidophosphoribosyltransferase	Amidophosphoribosyltransferase	Glutamine amidotransferase class- II:Phosphoribosyl transferase	Probable amidophosphoribosyltransferase	Amidophosphoribosyltransferase	
ECOLI02244	Colicin V production protein	Colicin V production protein homolog	Putative colicin V production protein	CvpA	Putative uncharacterized protein	Bacteriocin production protein	Colicin V production protein	Colicin V production protein	Putative bacteriocin production related protein	putative bacteriocin production protein	Colicin V production protein	colicin V production protein, putative	Bacteriocin production protein	Colicin V production protein	Colicin V production protein	Colicin V production protein	Colicin V production protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE COLICIN V PRODUCTION HOMOLOG TRANSMEMBRANE PROTEIN	CvpA family protein	Colicin V production protein	CvpA family protein	COLICIN V PRODUCTION PROTEIN	Bacteriocin production protein	Membrane protein required for colicin V production	Colicin V production protein	Putative colicin V production protein	Bacteriocin production protein	Colicin v production protein	Residues 1 to 162 of 162 are 98 pct identical to residues 1 to 162 of a 162 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288887.1 membrane protein required for colicin V production	
ECOLI02245	Protein dedD	DedD protein	DedD protein	Putative membrane protein	putative DedD protein	DedD protein	DedD protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Sporulation-related repeat protein	DedD protein	Putative lipoprotein	Cell division related protein	DedD protein	Residues 7 to 226 of 226 are 93 pct identical to residues 1 to 220 of a 220 aa protein DEDD_ECOLI sp: P09549 DedD protein	Putative membrane protein	Possible transmembrane protein	DedD protein	Lipoprotein	IPR000694: Proline-rich region paral putative lipoprotein	similar to Salmonella typhi CT18 DedD protein DedD protein	Putative membrane protein	Putative uncharacterized protein	DedD protein	Putative uncharacterized protein	DedD Uncharacterized conserved membrane protein	
ECOLI02246	Bifunctional protein folC	similar to sp|Q12676 Saccharomyces cerevisiae YMR113w FOL3 dihydrofolate synthetase, start by similarity	Folylpolyglutamate synthase	Probable folylpolyglutamate synthase [Source:GeneDB_Spombe;Acc:SPAC227.09]	similar to sp|Q12676 Saccharomyces cerevisiae YMR113w FOL3 dihydrofolate synthetase, start by similarity	Folylpolyglutamate synthase	FolC bifunctional protein	Folylpolyglutamate synthase/dihydrofolate synthase	Folyl-polyglutamate synthetase	Folylpolyglutamate synthase/dihydrofolate synthase	Folylpolyglutamate synthase	DEHA2F21846p;similar to uniprot|Q12676 Saccharomyces cerevisiae YMR113W FOL3 Dihydrofolate synthetase;	Folylpolyglutamate synthase	Folylpolyglutamate synthase	Putative folylpolyglutamate synthase	Folylpolyglutamate synthase	Folylpolyglutamate synthetase	Putuative bifunctional Dihydrofolate/Folylpolyglutamate synthase	Tetrahydrofolylpolyglutamate synthase related protein	Folylpolyglutamate synthase/dihydrofolate synthase	Putuative bifunctional Dihydrofolate/Folylpolyglutamate synthase	Folyl-polyglutamate synthetase	FolC family protein	FolC bifunctional protein	Folylpolyglutamate synthase	Folylpolyglutamate synthase/dihydrofolate synthase	FolC	Folylpolyglutamate synthetase	Folylpolyglutamate synthase/dihydrofolate synthase	
ECOLI02247	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-CoA carboxylase, carboxyl transferase, beta subunit	Acetyl-CoA carboxylase beta subunit	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	identified by match to PFAM protein family HMM PF03671 acetyl-coenzyme A carboxylase carboxyl transferase, beta subunit	Acetyl-CoA carboxylase, carboxyl transferase subunit beta	Acetyl-CoA carboxyltransferase beta subunit	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-CoA carboxylase	Acetyl-CoA carboxylase, carboxyl transferase beta subunit	Acetyl-CoA carboxylase, carboxyl transferase beta subunit	Acetyl-CoA carboxylase, carboxyl transferase beta subunit	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-CoA carboxylase beta subunit	Acetyl-CoA carboxylase carboxyl transferase, beta subunit	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxyl transferase, beta subunit	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	
ECOLI02248	Protein dedA	DedA protein	DedA integral membrane protein	Putative uncharacterized protein	DedA protein	Putative uncharacterized protein	DedA protein	DedA protein	Putative uncharacterized protein	Uncharacterized membrane-associated protein	Uncharacterized membrane protein ML0287	Putative DedA family transmembrane protein	hypothetical DedA family protein	DedA protein	DedA protein	similar to GB:M16342, GB:M16342, GB:D28382, GB:M29063, SP:P07910, and PID:337455; identified by sequence similarity; putative dedA family protein	DedA family protein	Putative membrane protein	Putative membrane protein	Putative membrane protein	DedA family protein	Putative membrane protein	hypothetical protein	Putative uncharacterized protein	DedA	Conserved membrane protein	ALKALINE PHOSPHATASE LIKE PROTEIN	Putative membrane-associated protein DedA	Putative integral membrane protein	
ECOLI02249	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A	
ECOLI02250	USG-1 protein	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	USG-1 protein homolog	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate Semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Usg1	USG-1 protein homolog	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Putative semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	
ECOLI02251	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Phosphoglycerate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	putative erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	D-3-phosphoglycerate dehydrogenase	Residues 1 to 378 of 378 are 99 pct identical to residues 1 to 378 of a 378 aa protein from Escherichia coli O157:H7 ref: NP_311231.1 erythronate-4-phosphate dehyrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	Erythronate-4-phosphate dehydrogenase	similar to erythronate-4-phosphate dehydrogenase hypothetical protein	conserved gene erythronate-4-phosphate dehydrogenase	similar to erythronate-4-phosphate dehydrogenase hypothetical protein	Erythronate-4-phosphate dehydrogenase	IPR006140: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain erythronate-4-phosphate dehyrogenase	similar to Salmonella typhi CT18 erythronate-4-phosphate dehydrogenase erythronate-4-phosphate dehydrogenase	
ECOLI02253	UPF0226 protein yfcJ	UPF0226 protein yfcJ	Permeases of the major facilitator superfamily	Putative sugar transporter	sugar transporter	UPF0226 protein yfcJ	similar to AX066381-1|CAC26429.1| percent identity: 75 in 417 aa putative transport protein	Residues 1 to 364 of 364 are 99 pct identical to residues 29 to 392 of a 392 aa protein from Escherichia coli O157:H7 ref: NP_311233.1 putative transport protein	Probable transport protein	IPR007114: Major facilitator superfamily putative transport protein	similar to Salmonella typhi CT18 putative transmembrane transporter putative transmembrane transporter	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transport protein (MFS superfamily)	COG0477 putative transport protein	Similar to Bacteroides thetaiotaomicron putative sugar transporter BTt0699 SWALL:AAO75806 (EMBL:AE016928) (385 aa) fasta scores: E(): 3.6e-85, 60.51% id in 390 aa, and to Oceanobacillus iheyensis antibiotic resistance protein OB3076 SWALL:Q8CX72 (EMBL:AP004603) (396 aa) fasta scores: E(): 2.4e-18, 24.49% id in 392 aa putative transport-related membrane protein	UPF0226 protein yfcJ	putative permease of the major facilitator superfamily	major facilitator superfamily MFS_1	major facilitator family transporter 10 (probable multidrug efflux transporter, probable tetracyclin resistance protein)	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	putative transmembrane protein similarity:fasta; SWALL:YFCJ_SHIFL (SWALL:P59194); Shigella flexneri; hypothetical upf0226 protein YfcJ; yfcJ; length 392 aa; 370 aa overlap; query 18-386 aa; subject 24-392 aa	Putative uncharacterized protein	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: bur:Bcep18194_B2904 major facilitator superfamily (MFS_1) transporter	major facilitator superfamily transporter	Major facilitator superfamily MFS_1	Major facilitator superfamily MFS_1	Putative transport protein	major facilitator superfamily MFS_1	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: sbo:SBO_2359 putative transport protein	
ECOLI02252	Flagellar regulator flk	DIV protein	Cell division protein	Cell division protein	Residues 1 to 331 of 331 are 99 pct identical to residues 1 to 331 of a 331 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288895.1 cell division protein	Putative flagellar assembly regulatory protein,Flk	Couples flagellar P-and L-ring assembly to flagellar morphogenesis; cell division	similar to Salmonella typhi Ty2 Div protein Div protein	Putative flagellar assembly regulatory protein, Flk	Flagellar regulator flk	cell division protein	cell division protein	cell division protein	cell division protein	Putative uncharacterized protein	Putative flagellar assembly regulatory protein, Flk	Cell division protein	Flagellar assembly regulatory protein, Flk	Putative flagellar assembly regulatory protein,Flk	cell division protein	Flagellar assembly regulatory protein, Flk	cell division protein	Flagellar protein	Flagellar assembly protein	Putative uncharacterized protein	Div protein	Putative flagellar assembly regulatory protein, Flk	Predicted flagella assembly protein	Div-like protein	
ECOLI02254	3-oxoacyl-[acyl-carrier-protein] synthase 1	Beta-ketoacyl-[ACP] synthase I	3-oxoacyl-[acyl-carrier-protein] synthase 1	3-oxoacyl-(Acyl-carrier-protein) synthase I	FabB	Beta-ketoacyl-ACP synthase I	3-oxoacyl-(Acyl-carrier-protein) synthase	3-oxoacyl-(Acyl-carrier-protein) synthase	3-oxoacyl-[acyl-carrier-protein] synthase I	putative 3-oxoacyl- synthase I	3-oxoacyl-[acyl-carrier-protein] synthase 1	similar to GP:15073176; identified by sequence similarity; putative 3-oxoacyl-(acyl-carrier-protein) synthase I	3-oxoacyl-(Acyl-carrier-protein) synthase I	3-oxoacyl-[acyl-carrier-protein] synthase I	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE 3-OXOACYL-ACYL-CARRIER-PROTEIN SYNTHASE I	3-oxoacyl-[acyl-carrier-protein] synthase 1	3-oxoacyl-(Acyl-carrier-protein) synthase I	3-OXOACYL-(ACYL-CARRIER-PROTEIN) SYNTHASE I	3-oxoacyl-[acyl-carrier-protein] synthase I	3-oxoacyl-[acyl-carrier-protein] synthase I	beta-ketoacyl-ACP synthase I	Beta-ketoacyl-ACP synthase I	3-oxoacyl-[acyl-carrier-protein] synthase 1	3-oxoacyl-(Acyl-carrier-protein) synthase	3-oxoacyl-[acyl-carrier-protein ] synthase I	Residues 1 to 405 of 413 are 99 pct identical to residues 1 to 405 of a 406 aa protein from Escherichia coli O157:H7 ref: NP_311234.1 3-oxoacyl-[acyl-carrier-protein] synthase I	3-oxoacyl-[acyl-carrier-protein] synthase I	FabB protein	Probable 3-oxoacyl-[acyl-carrier-protein] synthase i	
ECOLI02255	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	Putative uncharacterized protein	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	UPF0209 protein VV2430	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	hypothetical peptidase	UPF0209 protein yfcK	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	pseudo	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	Putative uncharacterized protein	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	Oxidoreductase, FAD-binding family protein	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	Residues 1 to 688 of 688 are 98 pct identical to residues 1 to 688 of a 688 aa protein from Escherichia coli K12 ref: NP_416827.1 putative peptidase	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC	Similar to unknown protein hypothetical protein	conserved gene putative peptidase	
ECOLI02256	Uncharacterized protein yfcL	Putative uncharacterized protein STY2611	Conserved hypothetical protein	Hypothetical protein yfcL	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2198	Uncharacterized protein yfcL	Putative uncharacterized protein	Residues 1 to 91 of 92 are 100 pct identical to residues 1 to 91 of a 92 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288899.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YfcL of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Uncharacterized conserved protein	Putative cytoplasmic protein	conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	
ECOLI02257	Uncharacterized protein yfcM	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	pseudo	Hypothetical protein yfcM	Putative uncharacterized protein	Putative uncharacterized protein	Putative transporting ATPase	Putative transporting ATPase	Putative cytoplasmic protein	Residues 1 to 182 of 182 are 98 pct identical to residues 1 to 182 of a 182 aa protein from Escherichia coli K12 ref: NP_416829.1 putative transporting ATPase	Putative uncharacterized protein	Similar to putative transporting ATPase YfcM of Escherichia coli	Similar to conserved hypothetical protein hypothetical protein	conserved gene transporting ATPase	Similar to conserved hypothetical protein hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhimurium putative cytoplasmic protein putative cytoplasmic protein	Putative uncharacterized protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	hypothetical protein	Similar to: HI1563, YFCM_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved protein	Putative cytoplasmic protein	identified by similarity to OMNI:VC2113 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3101 putative transporting ATPase	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	
ECOLI02258	UPF0721 transmembrane protein yfcA	Putative uncharacterized protein	Putative uncharacterized protein	Putative integral membrane protein	Predicted permease	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Conserved hypothetical membrane protein	Hypothetical Membrane Spanning Protein	conserved hypothetical protein	Inner membrane protein yfcA	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Putative uncharacterized protein	Putative uncharacterized protein VP0474	UPF0721 transmembrane protein yfcA	hypothetical protein	Predicted permease	Residues 1 to 269 of 269 are 99 pct identical to residues 1 to 269 of a 269 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288901.1 putative structural protein	Putative membrane protein	Similar to putative structural protein YfcA of Escherichia coli	identified by similarity to OMNI:NTL01PM0363; match to protein family HMM PF01925 membrane protein, putative	Putative uncharacterized protein	putative permease	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	
ECOLI02259	Penicillin-insensitive murein endopeptidase	Penicillin-insensitive murein endopeptidase	MepA	Murein endopeptidase	Penicillin-insensitive murein endopeptidase	Penicillin-insensitive murein endopeptidase	hypothetical penicillin-insensitive mureinendopeptidase	Penicillin-insensitive murein endopeptidase precursor	similar to GB:U09086, GB:U09087, GB:U09088, GB:S76736, SP:P42166, SP:P42167, PID:508725, PID:508727, PID:508729, PID:885683, PID:885684, GB:U09086, GB:U09087, GB:U09088, GB:S76736, SP:P42166, SP:P42167, PID:508725, PID:508727, PID:508729, PID:885683, and PID:885684; identified by sequence similarity; putative penicillin-insensitive murein endopeptidase	Penicillin-insensitive murein endopeptidase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE MUREIN ENDOPEPTIDASE TRANSMEMBRANE PROTEIN	MUREIN ENDOPEPTIDASE	Putative penicillin-insensitive murein endopeptidase	Penicillin-insensitive murein endopeptidase	penicillin-insensitive murein endopeptidase A	Putative penicillin-insensitive murein endopeptidase A	Murein endopeptidase	Residues 1 to 274 of 274 are 100 pct identical to residues 1 to 274 of a 274 aa protein from Escherichia coli K12 ref: NP_416831.1 murein DD-endopeptidase, penicillin-insensitive	Penicillin-insensitive murein endopeptidase	identified by similarity to SP:P14007 murein endopeptidase	Murein endopeptidase protein	IPR005073: Peptidase U6, penicillin-insensitive murein endopeptidase murein DD-endopeptidase, penicillin-insensitive	similar to Salmonella typhi CT18 penicillin-insensitive murein endopeptidase precursor penicillin-insensitive murein endopeptidase precursor	similar to BRA1047, penicillin-insensitive murein endopeptidase MepA, penicillin-insensitive murein endopeptidase	Penicillin-insensitive murein endopeptidase	Penicillin-insensitive murein endopeptidase, truncation	Similar to: HI0197, MEPA_HAEIN penicillin-insensitive murein endopeptidase	Hypothetical protein	Penicillin-insensitive murein endopeptidase	
ECOLI02260	Chorismate synthase	chorismate synthase;	Bifunctional chorismate synthase and flavin reductase, catalyzes the conversion of 5- enolpyruvylshikimate 3-phosphate (EPSP) to form chorismate, which is a precursor to aromatic amino acids.  [Source:SGD;Acc:S000003116]	highly similar to sp|P28777 Saccharomyces cerevisiae YGL148w ARO2 chorismate synthase, start by similarity	Chorismate synthase	Chorismate synthase [Source:GeneDB_Spombe;Acc:SPCC1223.14]	highly similar to sp|P28777 Saccharomyces cerevisiae YGL148w ARO2 chorismate synthase singleton, start by similarity	Chorismate synthase	Chorismate synthase	Chorismate synthase	Chorismate synthase	Chorismate synthase	Chorismate synthase	Chorismate synthase	Chorismate synthase	Chorismate synthase	Chorismate synthase	Chorismate synthase	Chorismate synthase	highly similar to uniprot|P28777 Saccharomyces cerevisiae YGL148w ARO2 chorismate synthase;	Chorismate synthase	DEHA2E03784p;highly similar to uniprot|P28777 Saccharomyces cerevisiae YGL148W ARO2 Bifunctional chorismate synthase and flavin reductase;	Chorismate synthase	Chorismate synthase	Chorismate synthase	identified by match to TIGR protein family HMM TIGR00033 chorismate synthase	Chorismate synthase	Chorismate synthase	
ECOLI02261	Uncharacterized adenine-specific methylase yfcB	Uncharacterized adenine-specific methylase PD_0606	Adenine-specific methylase	Uncharacterized adenine-specific methylase HI1201	Putative protoporphyrinogen oxidase	Putative methytransferase	Uncharacterized adenine-specific methylase NMB1655	Uncharacterized adenine-specific methylase PM0390	Uncharacterized adenine-specific methylase PA1678	Putative adenine-specific methylase	Uncharacterized adenine-specific methylase yfcB	Putative DNA methylase	putative adenine-specific methylase	Protoporphyrinogen oxidase, putative	Hypothetical adenine-specific methylase yfcB	Uncharacterized adenine-specific methylase VC_2118	Putative adenine-specific methylase	Putative adenine-specific methylase	HemK family protein	Putative uncharacterized protein	Modification methylase, HemK family	Putative adenine-specific methylase	HemK family protein	Putative adenine-specific methylase	Putative adenine-specific methylase	Possible adenine-specific methylase	SC4G1.28, possible methylase, len: 280 aa; similar to TR:P72542 (EMBL:U60417) Streptomyces pristinaespiralis PapM, 292 aa; fasta socres: opt: 401 z-score: 442.7 E(): 3.4e-17; 35.2% identity in 264 aa overlap and to SW:HEMK_ECOLI (EMBL:D28567) Escherichia coli HemK protein, 277 aa; fasta scores: opt: 299 z-score: 332.7 E(): 4.6e-11; 32.3% identity in 254 aa overlap putative methylase	Adenine-specific methylase	Residues 1 to 422 of 422 are 97 pct identical to residues 1 to 422 of a 422 aa protein from Escherichia coli K12 gi: 1788670 putative adenine-specific methylase	
ECOLI02262	UPF0115 protein yfcN	UPF0115 protein PM0391	UPF0115 protein VV2436	UPF0115 protein yfcN	Putative uncharacterized protein	conserved hypothetical protein	UPF0115 protein yfcN	UPF0115 protein VC_2119	UPF0115 protein SO_3081	UPF0115 protein ECA3071	UPF0115 protein BUsg_091	Smr domain protein	UPF0115 protein VP2204	UPF0115 protein yfcN	UPF0115 protein BU098	UPF0115 protein VV1_1979	Residues 1 to 183 of 183 are 100 pct identical to residues 1 to 183 of a 183 aa protein from Escherichia coli K12 ref: NP_416834.1 orf, conserved hypothetical protein	UPF0115 protein YPO2749/y1583/YP_2414	UPF0115 protein plu3198	IPR002625: Smr protein/MutS2 C-terminal putative Smr domain	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Smr/MutS family protein	Similar to: HI1202, YC02_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Conserved protein containing Smr (Small MutS-related) domain	UPF0115 protein bbp_092	UPF0115 protein yfcN	conserved hypothetical protein	
ECOLI02263	Uncharacterized protein yfcO	Residues 6 to 290 of 296 are 71 pct identical to residues 1 to 280 of a 280 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288906.1 orf, conserved hypothetical protein	Hypothetical protein yadU precursor	similar to |7388520|sp|P76498|YFCO_ECOLI Hypothetical protein yfcO precursor hypothetical protein	Uncharacterized protein yadU	conserved hypothetical protein	Putative uncharacterized protein	Putative fimbrial adhesin YfcO	conserved hypothetical protein	putative fimbrial adhesin YfcO precursor	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfcO	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02264	Uncharacterized fimbrial-like protein yfcP	Hypothetical fimbrial-like protein yfcP	Putative minor fimbrial subunit	Residues 1 to 174 of 174 are 72 pct identical to residues 1 to 173 of a 173 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288907.1 putative minor fimbrial subunit	Putative minor fimbrial subunit	Code: NU; COG: COG3539 putative minor fimbrial subunit	Code: NU; COG: COG3539 putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Hypothetical fimbrial-like protein YfcP	Putative Yfc fimbriae subunit YfcP	Exported pilin protein precursor	putative minor fimbrial subunit Code: NU; COG: COG3539	putative Yfc fimbriae subunit YfcP precursor	Fimbrial protein precursor	Fimbrial protein	Predicted fimbrial-like adhesin protein	Fimbrial protein	Fimbrial protein precursor	Putative minor fimbrial subunit	MrfH protein	Fimbrial subunit	Fimbrial protein	Putative fimbrial protein	Putative fimbrial protein	Putative exported fimbrial-like adhesin protein	Putative fimbrial protein	Putative exported fimbrial-like adhesin protein	Putative exported fimbrial-like adhesin protein	Predicted fimbrial subunit protein	
ECOLI02265	Uncharacterized fimbrial-like protein yfcQ	Hypothetical fimbrial-like protein yfcQ	Putative minor fimbrial subunit	Residues 1 to 156 of 156 are 79 pct identical to residues 1 to 156 of a 156 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288908.1 putative minor fimbrial subunit	similar to Salmonella typhi Ty2 fimbrial subunit fimbrial subunit	Putative minor fimbrial subunit	Code: NU; COG: COG3539 putative minor fimbrial subunit	Code: NU; COG: COG3539 conserved hypothetical protein	Code: NU; COG: COG3539; orf conserved hypothetical protein	Hypothetical fimbrial-like protein YfcQ	Putative Yfc fimbriae subunit YfcQ	putative minor fimbrial subunit Code: NU; COG: COG3539	putative Yfc fimbriae subunit YfcQ precursor	Fimbrial protein precursor	Putative uncharacterized protein	Predicted fimbrial-like adhesin protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative minor fimbrial protein	Putative minor fimbrial protein	Fimbrial subunit	Putative fimbrial protein	Putative fimbrial protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Predicted fimbrial subunit protein	Putative fimbrial protein	
ECOLI02266	Uncharacterized protein yfcR	Hypothetical protein yfcR	Putative minor fimbrial subunit	Residues 2 to 182 of 182 are 74 pct identical to residues 19 to 197 of a 197 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288909.1 putative minor fimbrial subunit	MrfE protein	Putative minor fimbrial subunit	Code: NU; COG: COG3539 putative fimbrial protein	Code: NU; COG: COG3539 putative fimbrial protein	Putative uncharacterized protein	Putative Yfc fimbriae subunit YfcR	putative fimbrial protein Code: NU; COG: COG3539	conserved hypothetical protein YfcR fimbrial precusor	Fimbrial protein	Fimbrial protein precursor	Predicted fimbrial-like adhesin protein	Putative minor fimbrial subunit	Putative fimbrial protein precursor	Fimbrial protein	Putaive minor fimbrial subunit	Putative fimbrial protein	Putative minor fimbrial subunit	Putative fimbrial-like adhesin exported protein	Putative minor fimbrial subunit	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Predicted fimbrial protein	Putative minor fimbrial subunit	Ybl108 protein	Putative minor fimbrial subunit	
ECOLI02267	Uncharacterized fimbrial chaperone yfcS	Hypothetical fimbrial chaperone yfcS	Putative fimbrial chaperone	similar to Escherichia coli K12 putative chaperone gi: 1788677 (251 aa). BLAST with identity of 88% in 250 aa. This CDS ontains frameshift. The sequence has been checked and is believed to be correct. pseudo	IPR001829: Bacterial pili assembly chaperone putative periplasmic fimbrial chaperone	similar to Salmonella typhimurium putative periplasmic fimbrial chaperone putative periplasmic fimbrial chaperone	Putative periplasmic fimbrial chaperone	probable periplasmic fimbrial chaperone	Code: NU; COG: COG3121 putative chaperone	Code: NU; COG: COG3121 putative chaperone	pili assembly chaperone	Code: NU; COG: COG3121 putative chaperone	Pili assembly chaperone precursor	mrpD identified by match to protein family HMM PF00345; match to protein family HMM PF02753	Hypothetical fimbrial chaperone YfcS	Putative periplasmic chaperone YfcS	pili assembly chaperone PFAM: pili assembly chaperone KEGG: bur:Bcep18194_A4773 pili assembly chaperone	pili assembly chaperone PFAM: pili assembly chaperone KEGG: bcn:Bcen_1148 pili assembly chaperone	fimbrial chaperone protein identified by match to protein family HMM PF00345; match to protein family HMM PF02753	Pili chaperone protein	Type I pilus chaperone protein FimD	putative chaperone Code: NU; COG: COG3121	putative periplasmic chaperone YfcS precursor	Hypothetical fimbrial chaperone yfcS	Pili assembly chaperone precursor	Pili assembly chaperone precursor	MrpD	Putative bacterial pili assembly chaperone	Periplasmic pilus chaperone family protein	
ECOLI02268	Putative outer membrane usher protein yfcU	Putative fimbrial usher	IPR000015: Fimbrial biogenesis outer membrane usher protein; IPR002092: DNA-directed RNA polymerase, bacteriophage type putative fimbrial outer membrane usher	similar to Salmonella typhi Ty2 outer membrane usher protein outer membrane usher protein	Putative fimbrial outer membrane usher	probable fimbrial outer membrane usher protein	involved in fimbrial biogenesis; Code: NU; COG: COG3188 PapC-like porin protein	involved in fimbrial biogenesis; Code: NU; COG: COG3188 PapC-like porin protein	Fimbrial biogenesis outer membrane usher protein	Code: NU; COG: COG3188 putative fimbrial usher	Fimbrial biogenesis outer membrane usher protein precursor	Hypothetical outer membrane usher protein YfcU	Putative outer membrane usher YfcU	fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein KEGG: bur:Bcep18194_A4772 fimbrial biogenesis outer membrane usher protein	fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein KEGG: bcn:Bcen_1147 fimbrial biogenesis outer membrane usher protein	Fimbrial outer membrane usher protein	putative outer membrane usher YfcU precursor putative pilus assembly protein	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial usher family protein	Predicted export usher protein	Fimbrial usher family protein	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial usher protein	Fimbrial biogenesis outer membrane usher protein	Fimbrial biogenesis outer membrane usher protein	Putative uncharacterized protein	Outer membrane usher protein	Fimbrial usher family protein	
ECOLI02268	Putative outer membrane usher protein yfcU	Putative fimbrial usher	IPR000015: Fimbrial biogenesis outer membrane usher protein; IPR002092: DNA-directed RNA polymerase, bacteriophage type putative fimbrial outer membrane usher	similar to Salmonella typhi Ty2 outer membrane usher protein outer membrane usher protein	Putative fimbrial outer membrane usher	probable fimbrial outer membrane usher protein	involved in fimbrial biogenesis; Code: NU; COG: COG3188 PapC-like porin protein	involved in fimbrial biogenesis; Code: NU; COG: COG3188 PapC-like porin protein	Fimbrial biogenesis outer membrane usher protein	Code: NU; COG: COG3188 putative fimbrial usher	Fimbrial biogenesis outer membrane usher protein precursor	Hypothetical outer membrane usher protein YfcU	Putative outer membrane usher YfcU	fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein KEGG: bur:Bcep18194_A4772 fimbrial biogenesis outer membrane usher protein	fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein KEGG: bcn:Bcen_1147 fimbrial biogenesis outer membrane usher protein	Fimbrial outer membrane usher protein	putative outer membrane usher YfcU precursor putative pilus assembly protein	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial usher family protein	Predicted export usher protein	Fimbrial usher family protein	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial usher protein	Fimbrial biogenesis outer membrane usher protein	Fimbrial biogenesis outer membrane usher protein	Putative uncharacterized protein	Outer membrane usher protein	Fimbrial usher family protein	
ECOLI02269	Uncharacterized fimbrial-like protein yfcV	Hypothetical fimbrial-like protein yfcV	Putative major fimbrial subunit	Residues 1 to 187 of 187 are 97 pct identical to residues 1 to 187 of a 187 aa protein from Escherichia coli K12 ref: NP_416841.1 putative fimbrial-like protein	Putative fimbrial subunit	Code: NU; COG: COG3539 putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Hypothetical fimbrial-like protein YfcV	Putative Yfc fimbriae subunit YfcV	putative fimbrial-like protein Code: NU; COG: COG3539	putative Yfc fimbriae subunit YfcV precursor	Fimbrial protein	Predicted fimbrial-like adhesin protein	Fimbrial protein	Fimbrial protein precursor	Fimbrial protein	Putative uncharacterized protein	Fimbrial protein	Fimbrial protein	Putative fimbrial protein	Putative uncharacterized protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin exported protein	Putative fimbrial-like adhesin protein	Predicted fimbrial-protein like protein	Putative fimbrial-like adhesin exported protein	YfcV protein	Predicted fimbrial-like adhesin protein	
ECOLI02270	Phosphohistidine phosphatase sixA	Putative uncharacterized protein	Putative uncharacterized protein	Phosphohistidine phosphatase SixA	Phosphohistidine phosphatase	hypothetical phosphohistidine phosphatase	Phosphohistidine phosphatase sixA	Phosphohistidine phosphatase	Phosphohistidine phosphatase SixA	Phosphohistidine phosphatase	Phosphohistidine phosphatase SixA	Phosphohistidine phosphatase	Putative uncharacterized protein	Phosphohistidine phosphatase SixA	Residues 1 to 161 of 161 are 99 pct identical to residues 1 to 161 of a 161 aa protein from Escherichia coli K12 ref: NP_416842.1 orf, conserved hypothetical protein	Putative phosphohistidine phosphatase	Phosphohistidine phosphatase SixA	Similar to phosphohistidine phosphatase SixA hypothetical protein	Similar to phosphohistidine phosphatase SixA hypothetical protein	phosphohistidine phosphatase	similar to Salmonella typhi CT18 phosphohistidine phosphatase phosphohistidine phosphatase	Putative phosphohistidine phosphatase	phosphohistidine phosphatase SixA	Similar to: HI1462.2, SIXA_HAEIN phosphohistidine phosphatase SixA homolog	Phosphohistidine phosphatase SixA SixA protein	Phosphohistidine phosphatase SixA	Phosphohistidine phosphatase SixA	Phosphohistidine phosphatase	identified by match to protein family HMM PF00300; match to protein family HMM TIGR00249 phosphohistidine phosphatase SixA	
ECOLI02271	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	putative fatty oxidation complex, alpha subunit	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Residues 1 to 714 of 714 are 98 pct identical to residues 1 to 714 of a 714 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288914.1 putative enzyme	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	identified by similarity to SP:P77399; match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737 fatty oxidation complex, alpha subunit	IPR006180: 3-hydroxyacyl-CoA dehydrogenase paral putative dehydrogenase	similar to Salmonella typhi CT18 putative fatty acid oxidation complex alpha subunit putative fatty acid oxidation complex alpha subunit	Fatty acid oxidation complex subunit alpha	delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase enoyl-CoA hydratase	Fatty oxidation complex, alpha subunit	Fatty acid oxidation complex subunit alpha	identified by similarity to SP:P77399; match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; match to protein family HMM TIGR02440 fatty oxidation complex, alpha subunit	Code: I; COG: COG1250 putative enzyme	3-hydroxyacyl-CoA dehydrogenase	Code: I; COG: COG1250 putative enzyme	hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl- Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit [Source:HGNC Symbol;Acc:4801]	fatty oxidation complex, alpha subunit identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737	transcript_id=ENSOCUT00000009789	
ECOLI02272	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	putative fatty oxidation complex, beta subunit	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	Putative acyl-CoA thiolase	3-ketoacyl-CoA thiolase	Residues 1 to 436 of 436 are 98 pct identical to residues 1 to 436 of a 436 aa protein from Escherichia coli K12 ref: NP_416844.1 putative acyltransferase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	IPR002155: Thiolase paral putative acetyl-CoA acetyltransferase	similar to Salmonella typhi CT18 putative 3-ketoacyl-CoA thiolase putative 3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	Fatty oxidation complex, beta subunit	3-ketoacyl-CoA thiolase	identified by similarity to SP:P76503; match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; match to protein family HMM TIGR02446 fatty oxidation complex, beta subunit	Code: I; COG: COG0183 putative acyltransferase	Acetyl-CoA C-acyltransferase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12535077; Product type e : enzyme beta-keto thiolase	Code: I; COG: COG0183 putative acyltransferase	fatty oxidation complex, beta subunit identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930	transcript_id=ENSDNOT00000007007	Code: I; COG: COG0183 putative acyltransferase	transcript_id=ENSETET00000009306	transcript_id=ENSGACT00000009898	3-ketoacyl-CoA thiolase	
ECOLI02273	UPF0381 protein yfcZ	Putative uncharacterized protein	Putative uncharacterized protein STY2622	UPF0381 protein yfcZ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	IPR005272: Conserved hypothetical protein 743 Hypothetical protein yfcZ	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Uncharacterized BCR Hypothetical protein	Putative cytoplasmic protein	Code: S; COG: COG3691 conserved hypothetical protein	Code: S; COG: COG3691 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3691; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yfcZ	Hypothetical protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG3691	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfcZ	
ECOLI02274	Long-chain fatty acid transport protein	Outer membrane protein	Outer membrane protein P1	Putative uncharacterized protein	Outer membrane protein, putative	Putative outer membrane protein NMB0088	Probable outer membrane protein	Long-chain fatty acid transport protein	Long-chain fatty acid transport protein precursor	Putative fatty acid transport system, membrane protein	Long-chain fatty acid transport protein, putative	Long-chain fatty acid transport protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE OUTER MEMBRANE PROTEIN	pseudo	Putative uncharacterized protein	Long-chain fatty acid transport protein	Long-chain fatty acid transport protein	Residues 1 to 448 of 448 are 99 pct identical to residues 1 to 448 of a 448 aa protein from Escherichia coli K12 ref: NP_416846.1 transport of long-chain fatty acids; sensitivity to phage T2	Putative long-chain fatty acid transport protein	Long-chain fatty acid transport protein	Similar to long-chain fatty acid transport protein hypothetical protein	conserved gene long chain fatty acid transporter	Similar to long-chain fatty acid transport protein hypothetical protein	Outer membrane protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark outer membrane protein	IPR005017: Membrane protein involved in aromatic hydrocarbon degradation transport of long-chain fatty acids; sensitivity to phage T2	similar to Salmonella typhi CT18 long-chain fatty acid transport protein precursor long-chain fatty acid transport protein precursor	Outer membrane protein	Putative long-chain fatty acid outer membrane transport protein	
ECOLI02275	Uncharacterized protein yfdF	Residues 14 to 355 of 355 are 91 pct identical to residues 11 to 352 of a 352 aa protein from Escherichia coli K12 ref: NP_416847.1 orf, conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfdF	Putative uncharacterized protein yfdF	Putative uncharacterized protein yfdF	Putative uncharacterized protein yfdF	Predicted protein	Predicted protein	conserved predicted protein	
ECOLI02276	Lipoprotein vacJ	Putative uncharacterized protein	Uncharacterized protein RC0123	VacJ-related protein	VacJ	Putative uncharacterized protein	Putative periplasmic protein	Surface lipoprotein VacJ	VacJ lipoprotein	Putative uncharacterized protein	VacJ lipoprotein	VacJ lipoprotein, putative	VacJ lipoprotein	Uncharacterized protein RT0044	Putative lipoprotein	Putative lipoprotein	VacJ lipoprotein, putative	Lipoprotein	VacJ lipoprotein, putative	Putative lipoprotein	VacJ lipoprotein	Lipoprotein	VacJ lipoprotein	Uncharacterized protein RP093	Residues 1 to 251 of 251 are 100 pct identical to residues 1 to 251 of a 251 aa protein VACJ_SHIFL sp: P43262 VacJ lipoprotein precursor	VacJ lipoprotein	VacJ lipoprotein	conserved lipoprotein hypothetical protein	conserved gene lipoprotein VacJ-like	
ECOLI02277	Inner membrane protein yfdC	Putative membrane protein	Hypothetical protein yfdC	putative transporter	Putative membrane protein	Transporter, putative	Putative transport	pseudo	Residues 1 to 273 of 273 are 99 pct identical to residues 38 to 310 of a 310 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288920.1 putative transport	putative transport	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transporter (formate/nitrite transporter family)	Transporter, formate/nitrite transporter family, putative	Putative transport	transporter, putative	transporter, formate/nitrite transporter family, putative	transporter, putative	transporter 47 (probable formate transporter)	Code: P; COG: COG2116 putative transport	Code: P; COG: COG2116 putative transport	conserved hypothetical protein	formate/nitrite transporter family (FNT)	putative transport	transporter, formate/nitrite transporter family, putative	Code: P; COG: COG2116 putative transport	Formate/nitrite family of transporters	Putative transporter protein	Hypothetical protein	Formate/nitrite transporter	
ECOLI02278	Putative prophage CPS-53 integrase	Putative prophage integrase	Lambda integrase-like protein(phage related)	Prophage pi3 protein 60, integrase	Putative uncharacterized protein gbs0211	identified by match to PFAM protein family HMM PF00589 site-specific recombinase, phage integrase family	identified by match to protein family HMM PF00589 site-specific recombinase, phage integrase family	Code: L; COG: COG0582 putative prophage Sf6-like integrase	phage integrase	Possible prophage integrase	Phage integrase	putative phage integrase	CPS-53 (KpLE1) prophage; predicted prophage CPS- 53 integrase	Putative site-specific recombinase, integrase from bacteriophage	Putative integrase	Integrase	Integrase	Putative prophage CPS-53 integrase; CPS-53 (KpLE1) prophage	Putative prophage CPS-53 integrase; CPS-53 (KpLE1) prophage	Putative prophage CPS-53 integrase; CPS-53 (KpLE1) prophage	Predicted integrase	Phage integrase	CPS-53 (KpLE1) prophage; predicted prophage CPS- 53 integrase	CPS-53 (KpLE1) prophage; predicted prophage CPS- 53 integrase	Putative integrase	Phage-related integrase	
ECOLI02280	Bactoprenol glucosyl transferase homolog from prophage CPS-53	Glucosyl transferase	Putative glycosyl transferase family protein	Glycosyl transferase family protein	Bactoprenol glucosyl transferase	Dolichol-phosphate mannosyltransferase MtrA	Bactoprenol glucosyl transferase	Putative glycosyl transferase	similar to GB:Z17227, SP:Q08334, PID:393379, and PID:571296; identified by sequence similarity; putative glycosyl transferase, group 2 family protein	sugar transferase	Putative sugar transferase	Lin2695 protein	Residues 1 to 309 of 309 are 100 pct identical to residues 1 to 309 of a 309 aa protein GTRB_BPSF2 sp: O21943 bactoprenol glucosyl transferase	Similar to CsbB stress response protein	Glycosyltransferase	identified by match to protein family HMM PF00535 glycosyl transferase, group 2 family protein	CsbB stress response protein	stress response protein	glycosil transferase	Putative uncharacterized protein ykcG	Putative uncharacterized protein gbs1545	identified by match to PFAM protein family HMM PF00535 glycosyl transferase, group 2 family protein	hypothetical protein, similar to CsbB stress response protein	Glycosyl transferase, family 2	Glycosyl transferase, group 2 family	Glycosyltransferases involved in cell wall biogenesis WcaA protein	Similar to Q55487 Putative glycosyl transferase from Synechocystis sp. (318 aa). FASTA: opt: 1079 Z-score: 1283.0 E(): 1.3e-63 Smith-Waterman score: 1079; 50.000 identity in 298 aa overlap glycosyl transferase	glycosyl transferase, family 2	Putative glycosyltransferase	
ECOLI02281	Uncharacterized protein yfdI	Putative uncharacterized protein precursor	Putative uncharacterized protein	CPS-53 (KpLE1) prophage; predicted inner membrane protein	CPS-53 (KpLE1) prophage; predicted inner membrane protein	
ECOLI02283	Uncharacterized protein yfdK	Hypothetical protein yfdK	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	Putative uncharacterized protein yfdK	conserved hypothetical protein phage-associated	Phage tail assembly chaperone gp38	CPS-53 (KpLE1) prophage; conserved protein	Tail assembly chaperone gp38	Putative uncharacterized protein	Putative uncharacterized protein	Tail fiber assembly protein	Putative uncharacterized protein	Putative tail fibre assembly protein	Predicted protein	Ybl48 protein	Phage tail fiber assembly protein	APSE-2 prophage; tail fiber asembly protein	CPS-53 (KpLE1) prophage; conserved protein	Putative uncharacterized protein	Putative phage tail fibre assembly protein	
ECOLI02282	Putative tail fiber assembly protein homolog from prophage CPS-53	pseudo	
ECOLI02284	Putative uncharacterized protein yfdL	pseudo	
ECOLI02285	Putative uncharacterized protein yfdM	
ECOLI02286	Uncharacterized protein yfdN	Putative uncharacterized protein yfdN1	conserved hypothetical protein phage-associated	CPS-53 (KpLE1) prophage; predicted protein	Phage protein	Sb43	Putative uncharacterized protein yfdN	Putative uncharacterized protein yfdN	Putative uncharacterized protein yfdN	CPS-53 (KpLE1) prophage; predicted protein	hypothetical protein Prophage ECO103_P01	
ECOLI02287	Putative uncharacterized protein yfdO	

ECOLI02288	Uncharacterized protein yfdP	Putative uncharacterized protein	hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	CPS-53 (KpLE1) prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Prophage protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfdP	Putative uncharacterized protein	Putative uncharacterized protein	CPS-53 (KpLE1) prophage; predicted protein	hypothetical protein Prophage ECO103_P01	Hypothetical prophage protein	
ECOLI02289	Uncharacterized protein yfdQ	Hypothetical protein yfdQ	Putative uncharacterized protein	hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	CPS-53 (KpLE1) prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Prophage protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfdQ	Putative uncharacterized protein yfdQ	CPS-53 (KpLE1) prophage; predicted protein	hypothetical protein Prophage ECO103_P01	Hypothetical prophage protein	
ECOLI02290	Uncharacterized protein yfdR	Predicted hydrolase of HD superfamily	Hypothetical protein yfdR	Putative uncharacterized protein	hypothetical protein	hypothetical protein KEGG: bba:Bd2777 predicted hydrolase of HD superfamily, ev=5e-23, 41% identity	Metal dependent phosphohydrolase, HD region	HD domain protein	hypothetical protein KEGG: ecj:JW2358 conserved hypothetical protein	conserved hypothetical protein KEGG: eci:UTI89_C5091 hypothetical protein	conserved hypothetical protein Hypothetical protein yfdR. The HD domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity. These enzymes appear to be involved in the nucleic acid metabolism, signal transduction and possibly other functions in bacteria,archaea and eukaryotes TREMBL:Q8HAA3: 41% identity,52% similarity InterPro:IPR003607; Met_phsphohydro. SMART:SM00471; HDc hstdl_phs_rel: histidinol phosphatase-r No signal peptide No transmembrane helices Function unclear	Putative uncharacterized protein	CPS-53 (KpLE1) prophage; conserved protein	Metal dependent phosphohydrolase	Putative uncharacterized protein	Putative uncharacterized protein	Phage protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfdR	Putative uncharacterized protein yfdR	Putative uncharacterized protein yfdR	Metal dependent phosphohydrolase	Putative uncharacterized protein	CPS-53 (KpLE1) prophage; conserved protein	hypothetical protein Prophage ECO103_P01	Hypothetical prophage protein	Phage protein	
ECOLI02291	Uncharacterized protein yfdS	Putative uncharacterized protein	CPS-53 (KpLE1) prophage; predicted protein	CPS-53 (KpLE1) prophage; predicted protein	hypothetical protein Prophage ECO103_P01	
ECOLI02292	Uncharacterized protein yfdT	CPS-53 (KpLE1) prophage; predicted protein	Putative uncharacterized protein yfdT	CPS-53 (KpLE1) prophage; predicted protein	hypothetical protein Prophage ECO103_P01	
ECOLI02294	Response regulator inhibitor for tor operon	Response regulator inhibitor for tor operon	Response regulator inhibitor for tor operon	Response regulator inhibitor for tor operon	Response regulator inhibitor for tor operon	Response regulator inhibitor for tor operon	
ECOLI02295	HTH-type transcriptional regulator dsdC	D-serine deaminase activator	D-serine deaminase activator	IPR000847: Bacterial regulatory protein LysR, HTH motif transcriptional activator (LysR family)	similar to Salmonella typhi CT18 D-serine deaminase activator D-serine deaminase activator	LysR family transcriptional activator	identified by similarity to SP:P46068; match to protein family HMM PF00126; match to protein family HMM PF03466; match to protein family HMM TIGR02036 D-serine deaminase activator	D-serine deaminase activator	Transcriptional regulator (LysR family)	D-serine dehydratase (Deaminase) transcriptional activator	D-serine deaminase transcriptional activator identified by match to protein family HMM PF00126; match to protein family HMM PF03466; match to protein family HMM TIGR02036	D-serine dehydratase transcriptional activator DsdC	Transcriptional regulator	D-serine deaminase activator	Transcriptional regulator, LysR family	TIGRFAM: D-serine deaminase transcriptional activator PFAM: regulatory protein LysR; LysR substrate-binding KEGG: cps:CPS_4658 D-serine deaminase activator transcriptional regulator, LysR family	Transcriptional activator	Transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein LysR; LysR substrate-binding KEGG: cvi:CV_2649 D-serine deaminase activator	DNA-binding transcriptional dual regulator	D-serine deaminase transcriptional activator	Transcriptional regulator, LysR family	D-serine deaminase transcriptional activator	Transcriptional regulator, LysR family	D-serine deaminase activator	Putative uncharacterized protein	Putative uncharacterized protein	D-serine deaminase activator	
ECOLI02296	DsdX permease	DsdX permease	DsdX permease	putative Gnt family transport protein	similar to Salmonella typhi CT18 DsdX permease DsdX permease	Putative Gnt family transport protein	DsdX permease	D-serine permease	DsdX permease	DsdX permease	Gluconate transporter	TIGRFAM: gluconate transporter PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit KEGG: plu:plu1969 dsdX permease gluconate transporter	Putative Gnt family transport protein	Gluconate transporter	gluconate transporter TIGRFAM: gluconate transporter PFAM: Gluconate transporter; Citrate transporter KEGG: asa:ASA_2939 DsdX permease	Gluconate transporter	Predicted transporter	Transporter, gluconate:H+ symporter (GntP) family	Gluconate transporter	Transporter, gluconate:H+ symporter (GntP) family	Putative uncharacterized protein	Putative uncharacterized protein	DsdX permease	D-beta-hydroxybutyrate permease	DsdX permease	DsdX permease	DsdX permease	DsdX permease	DsdX permease	
ECOLI02297	D-serine dehydratase	Probable D-serine dehydratase	D-serine dehydratase	Probable D-serine dehydratase	Probable D-serine dehydratase	Probable D-serine dehydratase	Probable D-serine dehydratase	putative D-serine dehydratase	D-serine dehydratase	identified by match to protein family HMM PF00291 D-serine dehydratase	Probable D-serine dehydratase	D-serine dehydratase (D-serine deaminase)	Probable D-serine dehydratase	D-serine dehydratase	Probable D-serine dehydratase	Residues 1 to 442 of 442 are 99 pct identical to residues 1 to 442 of a 442 aa protein from Escherichia coli K12 ref: NP_416867.1 D-serine dehydratase (deaminase)	D-serine dehydratase	Probable D-serine dehydratase	Probable D-serine dehydratase	D-serine dehydratase	IPR000634: Serine/threonine dehydratase, pyridoxal-phosphate-binding site; IPR001926: Pyridoxal-5'-phosphate-dependent enzyme, beta family D-serine deaminase (dehydratase)	similar to Salmonella typhi CT18 D-serine dehydratase D-serine dehydratase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme D-serine deaminase (dehydratase)	D-serine dehydratase	identified by similarity to SP:P00926; match to protein family HMM PF00291; match to protein family HMM TIGR02035 D-serine ammonia-lyase	D-serine dehydratase	D-serine ammonia-lyase	deaminase; Code: E; COG: COG3048 D-serine dehydratase	similar to gi|52143633|ref|YP_083194.1| [Bacillus cereus ZK], percent identity 56 in 440 aa, BLASTP E(): e-136 D-serine dehydratase	
ECOLI02298	Multidrug resistance protein Y	Multidrug resistance protein Y	Residues 1 to 512 of 512 are 99 pct identical to residues 1 to 512 of a 512 aa protein from Escherichia coli K12 ref: NP_416868.1 multidrug resistance protein Y	go_component: integral to plasma membrane [goid 0005887]; go_function: multidrug transporter activity [goid 0015239]; go_process: response to toxin [goid 0009636] multidrug resistant protein	Code: GEPR; COG: COG0477 multidrug resistance protein Y	pseudo drug resistance transporter, EmrB/QacA family	Code: GEPR; COG: COG0477 multidrug resistance protein Y	Drug resistance transporter EmrB/QacA subfamily	Code: GEPR; COG: COG0477 multidrug resistance protein Y	Drug resistance transporter EmrB/QacA subfamily	Multidrug resistance protein Y	Multidrug resistance protein Y	drug resistance transporter, EmrB/QacA subfamily TIGRFAM: drug resistance transporter, EmrB/QacA subfamily PFAM: major facilitator superfamily MFS_1 KEGG: bcn:Bcen_3274 drug resistance transporter EmrB/QacA subfamily	multidrug resistance protein Y Code: GEPR; COG: COG0477	multidrug resistance protein Y	Drug resistance transporter, EmrB/QacA subfamily	Drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family subunit EmrY	Predicted multidrug efflux system	Multidrug resistance protein Y	Drug resistance transporter, EmrB/QacA subfamily	Multidrug resistance protein Y	Major facilitator superfamily MFS_1 precursor	Drug resistance transporter, EmrB/QacA subfamily	Major facilitator superfamily MFS_1 precursor	Multidrug resistance protein Y	pseudo	Multidrug resistance protein Y	Multidrug resistance protein	Putative multidrug efflux system	
ECOLI02299	Multidrug resistance protein K	Multidrug resistance protein	Putative multidrug resistance protein A	Multidrug resistance protein K	Multidrug resistance protein	Multidrug resistance protein K	Residues 1 to 387 of 387 are 97 pct identical to residues 1 to 387 of a 387 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288938.1 multidrug resistance protein K	Multidrug resistance secretion protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark multidrug resistance efflux pump	Multidrug resistance translocase	Similar to: HI0898, EMRA_HAEIN multidrug resistance protein A	Multidrug efflux MFS membrane fusion protein	Membrane fusion component of tripartite multidrug resistance system	identified by similarity to SP:P27303; match to protein family HMM PF00529 multidrug resistance protein	identified by similarity to SP:P27303; match to protein family HMM PF00529 multidrug resistance protein	Secretion protein HlyD	Code: V; COG: COG1566 multidrug resistance protein K	Code: V; COG: COG1566 multidrug resistance protein K	Secretion protein HlyD	Code: V; COG: COG1566 multidrug resistance protein K	Multidrug resistance protein K	multidrug resistance efflux pump identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Multidrug resistance protein K	multidrug resistance protein identified by match to protein family HMM PF00529	Secretion protein HlyD family protein	multidrug resistance protein	putative HlyD family secretion protein Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	multidrug resistance protein K Code: V; COG: COG1566	EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein	
ECOLI02300	Positive transcription regulator evgA	Transcriptional regulatory protein	Putative fimbrial protein Z, transcriptional regulator	Positive transcription regulator evgA	Putative two-component response regulator	Residues 1 to 204 of 204 are 100 pct identical to residues 1 to 204 of a 204 aa protein from Escherichia coli O157:H7 ref: NP_311275.1 putative positive transcription regulator	Code: TK; COG: COG2197 putative positive transcription regulator (sensor EvgS)	sensor EvgS; Code: TK; COG: COG2197 putative positive transcription regulator	sensor EvgS; Code: TK; COG: COG2197 putative positive transcription regulator	Positive transcription regulator EvgA	two component transcriptional regulator, LuxR family	Putative positive transcription regulator	positive transcription regulator EvgA identified by similarity to SP:P30854; match to protein family HMM PF00072; match to protein family HMM PF00196	putative positive transcription regulator Code: TK; COG: COG2197	DNA-binding response regulator in two-component regulatory system with EvgS	Putative bacterial regulatory protein, LuxR	Positive transcription regulator EvgA	DNA-binding response regulator in two-component regulatory system with EvgS	Positive transcription regulator EvgS	Two component transcriptional regulator, LuxR family	Positive transcription regulator EvgS	Putative uncharacterized protein	Positive transcription regulator EvgA	Positive transcription regulator EvgA	Positive transcription regulator EvgA	Two-component response regulator	DNA-binding response regulator in two-component regulatory system with EvgS	DNA-binding response regulator in two-component regulatory system with EvgS	DNA-binding response regulator in two-component regulatory system with EvgS	
ECOLI02301	Sensor protein evgS	Sensor protein	Sensor protein	Sensor protein evgS	Virulence sensor protein bvgS	Virulence sensor protein bvgS	Sensor protein	Virulence sensor protein bvgS	Sensor protein	Sensor protein evgS	Residues 1 to 1197 of 1197 are 99 pct identical to residues 1 to 1197 of a 1197 aa protein from Escherichia coli K12 ref: NP_416871.1 putative sensor for regulator EvgA	Sensor protein	identified by similarity to SP:P16575; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229 sensory box histidine kinase/response regulator	PAS	Code: ET; COG: COG0834 putative sensor for regulator EvgA	Code: ET; COG: COG0834 putative sensor for regulator EvgA	virulence sensor protein start codon not provided	Code: ET; COG: COG0834 putative sensor for regulator EvgA	Sensor protein	Signal transduction histidine kinase precursor	PAS/PAC sensor hybrid histidine kinase	Sensor protein	histidine kinase PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein SMART: extracellular solute-binding protein, family 3 KEGG: hch:HCH_00309 signal transduction histidine kinase	Sensor protein	sensor protein evgS precursor identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518	Putative virulence sensor protein precursor	Two-component system hybrid sensor histidine kinase/response regulator	Sensor histidine kinase/response regulator	putative sensor for regulator EvgA	
ECOLI02302	Uncharacterized protein yfdE	Hypothetical protein yfdE	Putative uncharacterized protein	Putative CoA-transferase	Putative L-carnitine dehydratase	Putative uncharacterized protein yfdE	Residues 1 to 394 of 394 are 98 pct identical to residues 1 to 394 of a 394 aa protein from Escherichia coli K12 ref: NP_416872.1 putative enzyme	bile acid-inducible operon protein	L-carnitine dehydratase/bile acid-inducible protein F	Code: C; COG: COG1804 putative enzyme	Code: C; COG: COG1804 putative enzyme	Code: C; COG: COG1804 putative enzyme	Putative uncharacterized protein	Putative uncharacterized protein yfdE	Predicted acyl-CoA transferase/carnitine dehydratase	putative enzyme Code: C; COG: COG1804	putative CoA-transferase, NAD(P)-binding	L-carnitine dehydratase/bile acid-inducible protein F	CaiB/BaiF family protein	Predicted CoA-transferase, NAD(P)-binding	CAIB/BAIF family	L-carnitine dehydratase/bile acid-inducible protein F	CAIB/BAIF family	L-carnitine dehydratase/bile acid-inducible protein F	Formyl-CoA transferase	L-carnitine dehydratase/bile acid-inducible protein F	CAIB/BAIF family protein	putative CoA-transferase	Putative uncharacterized protein	
ECOLI02303	Uncharacterized transporter yfdV	Putative uncharacterized protein	Predicted permease	Putative transport integral membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Malate permease	Alr3703 protein	Predicted permeases	Hypothetical protein yfdV	Putative uncharacterized protein	Uncharacterized transporter yfdV	BH2670 protein	2SCK8.19c, possible transport integral membrane protein, len: 307 aa; similar to SW:MDCF_RHIME (EMBL:AF155772) Rhizobium meliloti putative malonate transporter MdcF, 320 aa; fasta scores: opt: 306 z-score: 339.0 E(): 2.6e-11; 27.4% identity in 299 aa overlap.  Contains possible hydrophobic membrane spanning regions putative transport integral membrane protein	Putative uncharacterized protein RP443	Malate permease	Residues 1 to 314 of 314 are 100 pct identical to residues 1 to 314 of a 314 aa protein from Escherichia coli O157:H7 ref: NP_311279.1 putative receptor protein	conserved membrane protein Auxin Efflux Carrier	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	COG0679 Predicted permeases putative receptor	Putative uncharacterized protein	Possible malate permease	conserved hypothetical protein	Predicted permease	Code: R; COG: COG0679 putative receptor protein	similar to gi|30020265|ref|NP_831896.1| [Bacillus cereus ATCC 14579], percent identity 41 in 304 aa, BLASTP E(): 6e-64 putative permease	identified by match to protein family HMM PF03547 putative transporter	L-Malate uniport protein	Auxin Efflux Carrier	
ECOLI02304	Probable oxalyl-CoA decarboxylase	similar to sp|P39994 Saccharomyces cerevisiae YEL020c, hypothetical start	Oxalyl-CoA decarboxylase	Acetolactate synthase large subunit homolog	similar to uniprot|P39994 Saccharomyces cerevisiae YEL020c;	Probable oxalyl-CoA decarboxylase	Probable oxalyl-CoA decarboxylase	Residues 1 to 564 of 564 are 99 pct identical to residues 1 to 564 of a 564 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288943.1 putative enzyme	OxcA	Oxalyl-CoA decarboxylase	Mb0122c, oxcA, len: 582 aa. Equivalent to Rv0118c, len: 582 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 582 aa overlap). Probable oxcA, oxalyl-CoA decarboxylase (EC 4.1.1.8), highly similar to many e.g.  P78093|OXC_ECOLI|7449483|B65011|YFDU|B2373|Z3637|ECS325 PROBABLE OXALYL-CoA DECARBOXYLASE from Escherichia coli (564 aa); M77128|OXAOXA_1 oxalyl-CoA decarboxylase from Oxalobacter formigenes (568 aa), FASTA scores: opt: 2124, E():0, (55.6% identity in 568 aa overlap). Also similar to mycobacterial IlvB proteins e.g. MLCB1788.46c unknown TPP-requiring enzyme from Mycobacterium leprae (548 aa); and AL0086|MLCB1788_19 from Mycobacterium leprae (548 aa), FASTA scores: opt: 831, E(): 0, (33.9% identity in 567 aa overlap). PROBABLE OXALYL-COA DECARBOXYLASE OXCA	COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome) oxalyl-CoA decarboxylase	go_component: cytoplasm [goid 0005737] 2-hydroxyphytanoyl-CoA lyase, putative	Thiamine pyrophosphate enzyme, C-terminal TPP-binding:Thiamine pyrophosphate enzyme, central region:Thiamine pyrophosphate enzyme, N-terminal TPP binding region	Code: EH; COG: COG0028 putative enzyme	Code: EH; COG: COG0028 putative enzyme	2-hydroxyacyl-CoA lyase 1 [Source:HGNC Symbol;Acc:17856]	transcript_id=ENSOCUT00000000766	transcript_id=ENSDNOT00000004220	Code: EH; COG: COG0028 putative enzyme	transcript_id=ENSETET00000016721	Probable oxalyl-CoA decarboxylase	Putative enzyme	thiamine pyrophosphate enzyme-like TPP binding region	Acetolactate synthase	transcript_id=ENSEEUT00000002162	thiamine pyrophosphate enzyme domain protein TPP-binding PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein KEGG: sth:STH1014 acetolactate synthase-like TPP-requiring enzyme	transcript_id=ENSOGAT00000013975	
ECOLI02305	Formyl-coenzyme A transferase	Putative uncharacterized protein	Formyl-coenzyme A transferase	Residues 1 to 416 of 416 are 100 pct identical to residues 1 to 416 of a 416 aa protein from Escherichia coli K12 ref: NP_416875.1 putative enzyme	L-carnitine dehydratase/bile acid-inducible protein F	Code: C; COG: COG1804 putative enzyme	Code: C; COG: COG1804 putative enzyme	L-carnitine dehydratase/bile acid-inducible protein F	Code: C; COG: COG1804 putative enzyme	Formyl-coenzyme A transferase	Formyl-coenzyme A transferase	L-carnitine dehydratase/bile acid-inducible protein F	Putative formyl-coenzyme A transferase	putative enzyme Code: C; COG: COG1804	Formyl-coenzyme A transferase	Formyl-coenzyme A transferase	formyl-coenzyme A transferase	Formyl-CoA transferase subutit, NAD(P)-binding	Putative acyl-CoA transferase	conserved hypothetical protein	L-carnitine dehydratase/bile acid-inducible protein F	Formyl-coenzyme A transferase	Formyl-CoA transferase, NAD(P)-binding	Formyl-coenzyme A transferase	Formyl-coenzyme A transferase	Formyl-coenzyme A transferase	L-carnitine dehydratase/bile acid-inducible protein F	Formyl-CoA transferase	Formyl-CoA transferase, NAD(P)-binding	
ECOLI02306	Protein yfdX	YfdX protein	Protein yfdX	Residues 1 to 207 of 207 are 97 pct identical to residues 1 to 211 of a 211 aa protein from Escherichia coli K12 ref: NP_416876.1 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	YfdX protein	Putative uncharacterized protein yfdX	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yfdX	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	YfdX protein	
ECOLI02307	Uncharacterized lipoprotein ypdI	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical lipoprotein YpdI	Putative uncharacterized protein ypdI	putative lipoprotein involved in colanic acid biosynthesis	Predicted lipoprotein involved in colanic acid biosynthesis	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Predicted lipoprotein involved in colanic acid biosynthesis	Putative lipoprotein	YpdI protein	Predicted lipoprotein involved in colanic acid biosynthesis	Predicted lipoprotein involved in colanic acid biosynthesis	predicted lipoprotein involved in colanic acid biosynthesis	Predicted lipoprotein involved in colanic acid biosynthesis	
ECOLI02308	Uncharacterized protein yfdY	Hypothetical protein yfdY	Putative uncharacterized protein	Residues 1 to 80 of 80 are 98 pct identical to residues 1 to 80 of a 80 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288947.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfdY	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02309	Protein ddg	Lipid A biosynthesis lauroyl acyltransferase	Putative acyltransferase	DDG protein	Putative lipid A biosynthesis acyltransferase	Acyltransferase, HtrB/MsbB family	Putative heat shock protein	Residues 1 to 328 of 328 are 99 pct identical to residues 1 to 328 of a 328 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288948.1 putative heat shock protein	Putative membrane protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark lipid A biosynthesis lauroyl acyltransferase	IPR000504: RNA-binding region RNP-1 (RNA recognition motif) cold shock-induced palmitoleoyl transferase	similar to Salmonella typhi CT18 putative acyltransferase putative acyltransferase	Putative membrane protein	Lipid A biosynthesis lauroyl acyltransferase	Lipid A biosynthesis lauroyl acyltransferase	Cold shock-induced palmitoleoyl transferase	lipid A biosynthesis lauroyl acyltransferase	Code: M; COG: COG1560 putative heat shock protein	Code: M; COG: COG1560 putative heat shock protein	lipid A biosynthesis lauroyl acyltransferase	putative lipid A biosynthesis acyltransferase	Lipid A biosynthesis acyltransferase	Lauroyl/myristoyl acyltransferase COG1560	Code: M; COG: COG1560 putative heat shock protein	Putative acyltransferase	Putative membrane protein	lipid A biosynthesis lauroyl acyltransferase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	putative lauroyl acyltransferase	DDG protein	
ECOLI02310	Uncharacterized aminotransferase yfdZ	Aspartate aminotransferase	Aminotransferase	Aminotransferase, class I	Probable aminotransferase	Aminotransferase	Aminotransferase, class I	Putative aminotransferase	Aminotransferase	Hypothetical aminotransferase yfdZ	similar to SP:O87320; identified by sequence similarity; putative aminotransferase, class I	Aminotransferase, classes I and II	Putative aminotransferase	Putative aminotransferase	Putative aminotransferase	PMID: 8907187 PMID: 10029535 best DB hits: BLAST: pir:D70479; probable transaminase (EC 2.6.1.-) aspC2 [similarity] -; E=1e-111 pir:E83056; probable aminotransferase PA4715 [imported] -; E=1e-100 swissprot:P77434; YFDZ_ECOLI HYPOTHETICAL AMINOTRANSFERASE YFDZ; E=4e-97 COG: aq_2094; COG0436 PLP-dependent aminotransferases; E=1e-112 PFAM: PF00155; Aminotransferase class-I; E=7.9e-34 probable transaminase	Aminotransferase, classes I and II	Putative aminotransferase	PUTATIVE AMINOTRANSFERASE AATC	Putative aminotransferase	probable aminotransferase	Possible aminotransferase	Residues 1 to 384 of 384 are 99 pct identical to residues 29 to 412 of a 412 aa protein from Escherichia coli K12 ref: NP_416880.1 putative aminotransferase	Putative aminotransferase	Similar to putative aminotransferase hypothetical protein	conserved gene aspartate aminotransferase	Similar to putative aminotransferase hypothetical protein	identified by match to protein family HMM PF00155 aminotransferase, classes I and II	Succinyldiaminopimelate aminotransferase protein	
ECOLI02311	Inner membrane protein ypdA	hypothetical sensor protein	Hypothetical protein ypdA	identified by match to protein family HMM PF01590; match to protein family HMM PF02518 sensor histidine kinase LytS	Two-component sensor kinase	Inner membrane protein ypdA	Probable sensor kinase protein	Code: T; COG: COG3275 putative sensor protein	histidine kinase internal region	Code: T; COG: COG3275 putative sensor protein	Putative uncharacterized protein	Signal transduction histidine kinase, LytS	Putative uncharacterized protein ypdA	two-component sensor kinase identified by match to protein family HMM PF02518; match to protein family HMM PF06580; match to protein family HMM PF07694	sensor histidine kinase identified by match to protein family HMM PF02518; match to protein family HMM PF06580; match to protein family HMM PF07694	Two-component system histidine kinase	Two-component system sensor histidine kinase	two-component sensor histidine kinase	putative sensor protein Code: T; COG: COG3275	Signal transduction histidine kinase, LytS	YpdA, sensory kinase in two-component system with YpdB	Signal transduction histidine kinase, LytS	Signal transduction histidine kinase, LytS	Signal transduction histidine kinase, LytS	PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region KEGG: shm:Shewmr7_0054 signal transduction histidine kinase, LytS signal transduction histidine kinase, LytS	Putative sensor protein	Signal transduction histidine kinase, LytS	Sensor histidine kinase	Signal transduction histidine kinase, LytS	
ECOLI02312	Uncharacterized response regulatory protein ypdB	hypothetical 2-component transcriptional regulator	Hypothetical response regulatory protein ypdB	Two-component response regulator	Putative two-component system response regulator	Uncharacterized response regulatory protein ypdB	CDS_ID OB1641 two-component response regulator	Lin0044 protein	Residues 7 to 250 of 250 are 99 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288951.1 putative 2-component transcriptional regulator	identified by similarity to EGAD:42941; match to protein family HMM PF00072; match to protein family HMM PF04397 response regulator LytR	Probable two-component transcriptional regulator	Sensory transduction protein lytR	identified by similarity to SP:P13131; match to protein family HMM PF00072; match to protein family HMM PF04397 accessory gene regulator protein A	Code: KT; COG: COG3279 putative 2-component transcriptional regulator	Code: KT; COG: COG3279 putative 2-component transcriptional regulator	transcriptional regulator, LytR/AlgR family	Putative uncharacterized protein	Response regulator receiver protein	Putative uncharacterized protein ypdB	Sensory transduction protein lytT identified by match to protein family HMM PF00072; match to protein family HMM PF04397	response regulator receiver domain identified by match to protein family HMM PF00072; match to protein family HMM PF04397	response regulator receiver protein PFAM: response regulator receiver; LytTr DNA-binding region KEGG: sco:SCO1220 regulatory protein	Putative two-component system response-regulator	Two-component system response regulator	two-component response regulator	Complete genome	response regulator receiver protein PFAM: response regulator receiver; LytTr DNA-binding region KEGG: mmc:Mmcs_4051 response regulator receiver protein	putative 2-component transcriptional regulator Code: KT; COG: COG3279	Response regulator receiver protein	
ECOLI02313	Uncharacterized HTH-type transcriptional regulator ypdC	Hypothetical transcriptional regulator ypdC	Putative ARAC-type regulatory protein	similar to Escherichia coli K12 putative ARAC-type regulatory protein gi: 1788725 (286 aa). BLAST with identity of 97% in 286 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	Probable transcription regulator protein	two-component response regulator	identified by match to protein family HMM PF00165; match to protein family HMM PF02311 transcriptional regulator, AraC family	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	conserved hypothetical protein	Hypothetical transcriptional regulator YpdC	Hypothetical transcriptional regulator YpdC	transcriptional regulator, AraC family	putative ARAC-type regulatory protein Code: K; COG: COG2207	putative DNA-binding protein	Helix-turn-helix-domain containing protein, AraC type	Putative uncharacterized protein	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Predicted DNA-binding protein	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Putative uncharacterized protein	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Putative transcriptional regulator	Putative DNA-binding protein	
ECOLI02314	Multiphosphoryl transfer protein 1	Multiphosphoryl transfer protein	Multiphosphoryl transfer protein	Residues 1 to 831 of 831 are 99 pct identical to residues 1 to 831 of a 831 aa protein from Escherichia coli K12 ref: NP_416884.1 putative PTS system enzyme IIA component, enzyme I	Phosphotransferase system enzyme I	Code: G; COG: COG1080 putative PTS system enzyme IIA component, enzyme I	Putative phosphoenolpyruvate-protein phosphotransferase YpdD	Putative phosphoenolpyruvate-protein phosphotransferase ypdD	putative PTS system enzyme IIA component, enzyme I Code: G; COG: COG1080	putative phosphoenolpyruvate-protein phosphotransferase YpdD	Phosphoenolpyruvate--protein phosphotransferase	Putative uncharacterized protein	Multiphosphoryl transfer protein 1	Phosphoenolpyruvate-protein kinase	Fused predicted PTS enzymes: Hpr component; enzyme I component; enzyme IIA component	Multiphosphoryl transfer protein 1	Phosphoenolpyruvate-protein phosphotransferase	Multiphosphoryl transfer protein 1	Putative uncharacterized protein	Phosphoenolpyruvate-protein phosphotransferase	Phosphotransferase system enzyme I	Multiphosphoryl transfer protein 1	Putative PTS system IIA component	Putative fused PTS enzymes (Multiphosphoryl transfer protein): Hpr component ; enzyme I component ; enzyme IIA component	pseudo	Putative fused PTS enzymes (Multiphosphoryl transfer protein): Hpr component ; enzyme I component ; enzyme IIA component	Putative fused PTS enzymes (Multiphosphoryl transfer protein): Hpr component ; enzyme I component ; enzyme IIA component	Putative fused PTS enzymes (Multiphosphoryl transfer protein): Hpr component ; enzyme I component ; enzyme IIA component	Fused predicted PTS enzymes: Hpr component/enzyme I component/enzyme IIA component	
ECOLI02315	Aminopeptidase ypdE	Hypothetical protein ypdE	Glutamyl-aminopeptidase	hypothetical conserved protein	Putative glutamyl-aminopeptidase	Putative glutamyl-aminopeptidase; endo-1,4-beta- glucanase	Putative uncharacterized protein	Residues 1 to 345 of 345 are 98 pct identical to residues 1 to 345 of a 345 aa protein from Escherichia coli K12 ref: NP_416885.1 orf, conserved hypothetical protein	identified by similarity to EGAD:40297; match to protein family HMM PF05343 glutamyl-aminopeptidase	Glutamyl aminopeptidase	glutamyl-aminopeptidase	Endo-1,4-beta-glucanase	Glutamyl aminopeptidase	Putative uncharacterized protein gbs0172	similar to PID:1072381; identified by sequence similarity; putative glutamyl-aminopeptidase	Putative glutamyl-aminopeptidase	best blastp match gb|AAK33230.1| (AE006481) putative glutamyl-aminopeptidase [Streptococcus pyogenes M1 GAS] putative glutamyl-aminopeptidase	Glutamyl aminopeptidase	glutamyl-aminopeptidase	hypothetical protein, similar to endo-1,4-beta-glucanase (EC 3.2.1.4)	identified by similarity to SP:Q48677; match to protein family HMM PF05343 glutamyl aminopeptidase	glutamyl aminopeptidase	Code: G; COG: COG1363 conserved hypothetical protein	similar to gi|57286229|gb|AAW38323.1| [Staphylococcus aureus subsp. aureus COL], percent identity 73 in 358 aa, BLASTP E(): e-158 putative aminopeptidase	Code: G; COG: COG1363 conserved hypothetical protein	Glutamyl aminopeptidase	Glutamyl aminopeptidase	Code: G; COG: COG1363; orf conserved hypothetical protein	glutamyl aminopeptidase	
ECOLI02316	Aminopeptidase ypdF	Xaa-pro dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	X-pro aminopeptidase	Putative Xaa-Pro aminopeptidase	Putative Xaa-Pro aminopeptidase	Probable peptidase	XAA-pro dipeptidase	identified by match to TIGR protein family HMM TIGR00501 proline dipeptidase	Aminopeptidase P	Putative peptidase	Xaa-pro dipeptidase	Proline dipeptidase related protein	Metallopeptidase family M24:Xaa-Pro dipeptidase/Xaa-Pro aminopeptidase	hypothetical X-Pro dipeptidase	Xaa-Pro dipeptidase	Probable proline dipeptidase	Proline dipeptidase	Aminopeptidase P, putative	Xaa-pro aminopeptidase	X-Pro dipeptidase	Related to Xaa-Pro dipeptidase	Lmo1578 protein	Xaa-Pro aminopeptidase	Putative cytoplasmic peptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	Putative peptidase ypdF	
ECOLI02317	Fructose-like permease IIC component 1	Fructose-like permease IIC component	Residues 1 to 415 of 415 are 99 pct identical to residues 1 to 415 of a 415 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288956.1 putative transport protein	Code: G; COG: COG1299 putative transport protein	Code: G; COG: COG1299 putative transport protein	Code: G; COG: COG1299 putative transport protein	Putative PTS system IIC component YpdG	Putative transport protein	PTS system, IIc component	putative transport protein Code: G; COG: COG1299	putative enzyme IIC component of PTS	Putative uncharacterized protein	PTS system, fructose-like, IIC component	Predicted enzyme IIC component of PTS	PTS system, fructose-like, IIC component	PTS system, fructose subfamily, IIC subunit precursor	PTS system, fructose-like, IIC component	Putative uncharacterized protein	PTS system, fructose-like, IIC component	PTS system, fructose-like, IIC component	Putative transport protein	Putative enzyme IIC component of PTS	Putative enzyme IIC component of PTS	Putative enzyme IIC component of PTS	Putative enzyme IIC component of PTS	Putative enzyme IIC component of PTS	Predicted enzyme IIC component of PTS	Putative enzyme IIC component of PTS	YpdG protein	
ECOLI02318	Fructose-like phosphotransferase enzyme IIB component 1	Fructose-like phosphotransferase enzyme IIB component 1	Fructose-like phosphotransferase enzyme IIB component 1	Residues 1 to 125 of 125 are 97 pct identical to residues 1 to 125 of a 125 aa protein from Escherichia coli dbj: BAA16257.1 PTS system, fructose-like-2 IIB component 1 (phosphotransferase enzyme II, B component)	Code: G; COG: COG1445 putative PTS system enzyme IIB component	Code: G; COG: COG1445 putative PTS system enzyme IIB component	Code: G; COG: COG1445 putative PTS system enzyme IIB component	Putative PTS system IIB component YpdH	Putative PTS system IIB component YpdH	PTS system, IIb component	putative PTS system enzyme IIB component Code: G; COG: COG1445	putative PTS system IIB component YpdH	Putative uncharacterized protein	PTS system, fructose specific IIB subunit	Predicted enzyme IIB component of PTS	PTS system, Fructose specific IIB subunit	PTS system, fructose-specific, IIB subunnit precursor	PTS system, Fructose specific IIB subunit	Putative uncharacterized protein	PTS system, Fructose specific IIB subunit	PTS system, Fructose specific IIB subunit	Putative PTS system IIB component	Putative enzyme IIB component of PTS	Putative enzyme IIB component of PTS	Putative enzyme IIB component of PTS	Putative enzyme IIB component of PTS	Putative enzyme IIB component of PTS	pseudo	Putative enzyme IIB component of PTS	
ECOLI02319	Glucokinase	Glucokinase	Glucokinase	Glucokinase	Putative glucokinase	Putative glucokinase	Glucokinase	Glucokinase	Glucokinase	Glucokinase	Glucokinase	Glucokinase	Probable glucokinase	Glucokinase	similar to GB:X05610, GB:M24766, GB:J02760, SP:P08572, PID:180426, PID:29551, and PID:537329; identified by sequence similarity; putative glucokinase	Glucokinase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLUCOKINASE TRANSMEMBRANE PROTEIN	Glucokinase	glucokinase	Glucokinase	Glucokinase	glucokinase (glk)	Residues 1 to 321 of 321 are 99 pct identical to residues 1 to 321 of a 321 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288958.1 glucokinase	Glucokinase	Glucokinase	Glucokinase	Glucokinase	similar to glucokinase hypothetical protein	conserved gene glucokinase	
ECOLI02320	Putative ion-transport protein yfeO	Putative ion-transport protein yfeO	Voltage-gated chloride channel family protein	Lmo2387 protein	Chloride channel protein	Putative ion-transport protein yfeO	Putative ion-transport protein yfeO	chloride channel protein	Residues 1 to 418 of 418 are 99 pct identical to residues 1 to 418 of a 418 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288959.1 orf, conserved hypothetical protein	IPR001807: Cl- channel, voltage gated putative chloride channel permease	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	identified by similarity to OMNI:EF3007 membrane protein, putative	Putative ion-transport protein yfeO	CBS:Cl-channel, voltage gated	Code: P; COG: COG0038 conserved hypothetical protein	Code: P; COG: COG0038 conserved hypothetical protein	Hypothetical membrane spanning protein	Putative ion-transport protein yfeO	voltage-gated chloride channel family protein identified by match to protein family HMM PF00654	Putative ion-transport protein yfeO	conserved hypothetical protein Code: P; COG: COG0038	Uncharacterized conserved membrane protein	conserved hypothetical protein	Cl-channel, voltage-gated family protein precursor	Putative uncharacterized protein yfeO	Putative uncharacterized protein	Putative ion-transport protein yfeO	Cl-channel, voltage gated	Chloride channel core precursor	
ECOLI02321	Uncharacterized protein ypeC	Hypothetical protein ypeC	Putative exported protein	Uncharacterized protein ypeC	Residues 1 to 108 of 108 are 100 pct identical to residues 1 to 108 of a 108 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288960.1 orf, conserved hypothetical protein	Putative exported protein	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative exported protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein ypeC	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ypeC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	
ECOLI02322	Manganese transport protein mntH	transporter protein SMF1/ESP1;	DEHA2G08536p;similar to uniprot|P38925 Saccharomyces cerevisiae YOL122C SMF1 Divalent metal ion transporter and similar to uniprot|Q12078 Saccharomyces cerevisiae YLR034C SMF3;	H(+)-stimulated manganese uptake system protein	Probable manganese transport protein mntH	Manganese transport protein mntH	Transport protein, NRAMP family	Probable manganese transport protein mntH	Manganese transport protein mntH	Transport protein, NRAMP family; possible manganese transport protein	Manganese transport protein mntH	identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197 transport protein, NRAMP family	Manganese transport protein	Manganese transport protein	Manganese transport protein mntH	Transport protein, NRAMP family	Residues 1 to 412 of 412 are 99 pct identical to residues 1 to 412 of a 412 aa protein from Escherichia coli O157:H7 ref: NP_311298.1 high affinity manganese transport protein	Probable manganese transport protein mntH	Nramp	Probable manganese transport protein mntH	InterProMatches:IPR001046; manganese uptake,Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) manganese transporter	Putative uncharacterized protein ykjB	IPR001046: Natural resistance-associated macrophage protein Nramp family, manganese/divalent cation transport prortein	similar to Salmonella typhi CT18 manganese transport protein MntH manganese transport protein MntH	Probable manganese transport protein mntH	Manganese transport protein mntH	Mn2+ and Fe2+ transporter of the NRAMP family	transport protein, NRAMP family; possible manganese transport protein	P manganese transport protein of NRAMP family	
ECOLI02323	Nucleoside permease nupC	Nucleoside permease NupC	Nucleoside permease nupC	Nucleoside permease	Permease of transport system for 3 nucleosides	Residues 14 to 413 of 413 are 99 pct identical to residues 1 to 400 of a 400 aa protein from Escherichia coli K12 ref: NP_416894.1 permease of transport system for 3 nucleosides	Nucleoside permease	Pyrimidine nucleoside transport protein	Nucleoside permease NupC	identified by similarity to EGAD:30360; match to protein family HMM PF01773 nucleoside permease NupC	Nucleoside permease	Pyrimidine nucleoside transport protein	InterProMatches:IPR008276; Molecular Function: nucleoside:sodium symporter activity (GO:0005415), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) pyrimidine-nucleoside transport protein	Nucleoside permease NupC	IPR002668: Na+ dependent nucleoside transporter NUP family, nucleoside transport	pyrimidine nucleoside transport protein	CNT family H+/nucleoside symporter	Ortholog of S. aureus MRSA252 (BX571856) SAR0524 nucleoside permease	pyrimidine nucleoside transport protein	Similar to (AAP07626) Q81I17 Nucleoside permease nupC from Bacillus cereus (392 aa). FASTA: opt: 1351 Z-score: 1549.9 E(): 1.9e-78 Smith-Waterman score: 1351; 52.381 identity in 399 aa overlap Paralog of FTT0115 nucleoside permease NUP family protein	NUP family nucleoside transport protein	pyrimidine nucleoside transport protein	ortholog to Escherichia coli bnum: b2393; MultiFun: Cell structure 6.1; Metabolism 1.7.33; Transport 4.2.A.41, 4.S.146 nucleoside transport protein (NUP family)	Similar to Escherichia coli nucleoside permease NupC SW:NUPC_ECOLI (P33031) (400 aa) fasta scores: E(): 8.4e-72, 54.208% id in 404 aa, and to Bacillus subtilis pyrimidine nucleoside transport protein NupC SW:NUPC_BACSU (P39141) (393 aa) fasta scores: E(): 3.2e-59, 63.275% id in 403 aa nucleoside permease	Code: F; COG: COG1972 permease of transport system for 3 nucleosides	identified by similarity to EGAD:6216; match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670 nucleoside permease NupC	similar to gi|57285584|gb|AAW37678.1| [Staphylococcus aureus subsp. aureus COL], percent identity 85 in 404 aa, BLASTP E(): 0.0 nucleoside permease	Pyrimidine-specific nucleoside symporter	Code: F; COG: COG1972 permease of transport system for 3 nucleosides	
ECOLI02324	Putative transposase insL for insertion sequence element IS186A/B/C	IS186 ORF1	IS186, transposase	IS186/IS421 transposase	IS186, transposase	Transposase IS4 family protein	pseudo	InsL-3 protein	IS186/IS421 transposase	Putative transposase insL for insertion sequence IS186	
ECOLI02325	Uncharacterized protein yfeA	Hypothetical protein yfeA	Putative uncharacterized protein yfeA	Predicted signal transduction protein	IPR001633: EAL domain putative Diguanylate cyclase/phosphodiesterase domain 1; Diguanylate cyclase/phosphodiesterase domain 2	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	containing membrane domain an EAL and a GGDEF domain; COG5001 signal transduction protein	Putative diguanylate cyclase/phosphodiesterase domain 1 containing protein	identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254 GGDEF domain/EAL domain protein	Code: T; COG: COG2200 conserved hypothetical protein	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)	Putative uncharacterized protein	Putative uncharacterized protein yfeA	sensory box/GGDEF family protein identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254	conserved hypothetical protein	conserved outer membrane protein ELA domain	Diguanylate cyclase/phosphodiesterase	Putative uncharacterized protein yfeA	Putative uncharacterized protein	Diguanylate cyclase	Diguanylate cyclase/phosphodiesterase precursor	Diguanylate cyclase/phosphodiesterase precursor	Putative signal transduction protein containing diguanylate cyclase/phosphodiesterase domain	Predicted signal transduction protein	Predicted diguanylate cyclase	Diguanylate cyclase	Diguanylate cyclase/phosphodiesterase	Diguanylate cyclase	Putative uncharacterized protein	
ECOLI02326	Uncharacterized protein yfeC	Hypothetical protein yfeC	Putative uncharacterized protein yfeC	Residues 1 to 119 of 119 are 100 pct identical to residues 13 to 131 of a 131 aa protein from Escherichia coli dbj: BAA16269.1 orf, conserved hypothetical protein	putative negative regulator	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative negative regulator	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfeC	conserved hypothetical protein	conserved outer membrane protein	Putative negative regulator	Putative negative regulator	Putative uncharacterized protein	Putative uncharacterized protein	Predicted DNA-binding transcriptional regulator	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative negative regulator	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02327	Uncharacterized protein yfeD	Hypothetical protein yfeD	Putative uncharacterized protein yfeD	Residues 1 to 125 of 125 are 97 pct identical to residues 8 to 130 of a 130 aa protein from Escherichia coli K12 ref: NP_416898.1 orf, conserved hypothetical protein	putative negative regulator	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative negative regulator	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfeD	conserved hypothetical protein	putative DNA-binding transcriptional regulator	Putative uncharacterized protein	Putative negative regulator	Putative uncharacterized protein	Putative uncharacterized protein	Predicted DNA-binding transcriptional regulator	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02328	Glutamyl-tRNA synthetase	similar to sp|P48525 Saccharomyces cerevisiae YOL033w MSE1 glutamyl-tRNA synthetase, mitochondrial singleton, hypothetical start	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	DEHA2A12584p;similar to uniprot|P48525 Saccharomyces cerevisiae YOL033W MSE1 Mitochondrial glutamyl-tRNA synthetase;	similar to GB:U03554; identified by sequence similarity; putative glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase 2	Glutamyl-tRNA synthetase 2	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase	
ECOLI02329	HTH-type transcriptional regulator xapR	Xanthosine operon Regulatory protein	Putative LysR-family regulatory protein	IPR000847: Bacterial regulatory protein LysR, HTH motif regulator for XapA (LysR family)	Putative LysR-family regulatory protein	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	Regulator for XapA	Transcriptional regulator, LysR family	Xanthosine operon regulatory protein	Putative LysR-family regulatory protein	Xanthosine operon regulatory protein	LysR-family regulatory protein	LysR-family regulatory protein	xanthosine operon regulatory protein	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	DNA-binding transcriptional activator	Transcriptional regulator XapR	Xanthosine operon regulatory protein XapR	Transcriptional regulator, LysR family	Putative uncharacterized protein	Putative transcriptional regulator, LysR family	Putative uncharacterized protein	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	HTH-type transcriptional regulator XapR	HTH-type transcriptional regulator XapR	HTH-type transcriptional regulator XapR	Xanthosine operon transcriptional regulator	

ECOLI02330	Xanthosine permease	Xanthosine permease	Xanthosine permease	IPR004740: Nucleoside:H+ symporter; IPR007114: Major facilitator superfamily MFS superfamily, xanthosine permease	MFS family xanthosine permease	MFS superfamily xanthosine permease	go_component: integral to membrane [goid 0016021]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810] hypothetical protein, conserved	Xanthosine permease	Xanthosine permease	xanthosine transporter	Nucleoside transporter	Nucleoside transporter	Major facilitator superfamily MFS_1 precursor	Xanthosine transporter	Xanthosine transporter XapB	Xanthosine permease XapB	major facilitator superfamily MFS_1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1 KEGG: rrs:RoseRS_0665 hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Nucleoside transporter precursor	Nucleoside transporter precursor	Xanthosine permease	Nucleoside permease NupG	Nucleoside permease NupG	Nucleoside permease NupG	Xanthosine permease	Nucleoside permease NupG	Nucleoside permease NupG	Xanthosine permease	
ECOLI02331	Xanthosine phosphorylase	Purine nucleoside phosphorylase, specifically metabolizes inosine and guanosine nucleosides; involved in the nicotinamide riboside salvage pathway.  [Source:SGD;Acc:S000004199]	Methylthioadenosine phosphorylase	similar to uniprot|Q05788 Saccharomyces cerevisiae YLR209c PNP1;	Purine nucleoside phosphorylase I	Purine nucleoside phosphorylase	Putative purine nucleoside phosphorylase	Purine-nucleoside phosphorylase	Purine nucleoside phosphorylase	Purine nucleoside phosphorylase	Purine nucleoside phosphorylase	Purine-nucleoside phosphorylase	Xanthosine phosphorylase	Purine nucleoside phosphorylase	Pnp protein	Purine nucleoside phosphorylase I	Purine nucleoside phosphorylase	Purine-nucleoside phosphorylase	Pnp protein	Xanthosine phosphorylase	Purine nucleoside phosphorylase, family 2	identified by match to protein family HMM PF00896; match to protein family HMM TIGR01697; match to protein family HMM TIGR01700 purine nucleoside phosphorylase	Purine nucleoside phosphorylase	Purine nucleoside phosphorylase	PMID: 10360571 best DB hits: BLAST: pir:H72217; purine nucleoside phosphorylase - Thermotoga maritima; E=1e-60 ddbj:BAB05251.1; (AP001512) purine nucleoside phosphorylase; E=4e-57 swissprot:P46354; PUNA_BACSU PURINE NUCLEOSIDE PHOSPHORYLASE I; E=8e-56 COG: TM1737; COG0005 Purine nucleoside phosphorylase; E=1e-61 PFAM: PF00896; Phosphorylase family 2; E=1.6e-83 purine nucleoside phosphorylase	Purine nucleoside phosphorylase I	Purine nucleoside phosphorylase I, inosine and guanosine-specific	purine-nucleoside phosphorylase	Putative purine nucleoside phosphorylase	
ECOLI02332	Uncharacterized protein yfeN	Putative uncharacterized protein STY2659	Hypothetical protein yfeN	Putative exported protein	Similar to putative sugar hydrolase YfeN of Escherichia coli	Probable sugar hydrolase	putative outer membrane protein	Putative exported protein	putative sugar hydrolase	Putative outer membrane protein	Putative uncharacterized protein	Hypothetical protein precursor	Hypothetical protein precursor	Putative exported protein precursor	Hypothetical protein precursor	conserved outer membrane protein putative sugar hydrolase	putative sugar hydrolase KEGG: vfi:VF0719 putative sugar hydrolase	KEGG: vfi:VF0719 putative sugar hydrolase hypothetical protein	KEGG: vfi:VF0719 putative sugar hydrolase hypothetical protein	Conserved outer membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative membrane protein	Putative exported protein	Conserved outer membrane protein	Conserved outer membrane protein	Conserved outer membrane protein	
ECOLI02333	Uncharacterized HTH-type transcriptional regulator yfeR	Putative transcriptional regulator	Hypothetical transcriptional regulator yfeR	LysR-family transcriptional regulator	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Transcptional regulator, LysR family	Residues 1 to 308 of 308 are 100 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli K12 ref: NP_416904.1 putative transcriptional regulator LYSR-type	Probable transcription regulator transcription regulator protein	Probable transcriptional regulator LysR family	IPR000847: Bacterial regulatory protein LysR, HTH motif putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	hypothetical protein, similar to LysR family transcriptional regulator	Putative LysR family transcriptional regulator	regulatory protein, LysR:LysR, substrate-binding	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	transcriptional regulator, LysR family	Transcriptional regulator, LysR family	OsmT protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466	Putative transcriptional regulator, LysR family	conserved hypothetical protein	transcriptional regulator, LysR family	Putative transcriptional regulator LysR-type	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bur:Bcep18194_A4635 transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bcn:Bcen_1013 transcriptional regulator, LysR family	Transcriptional regulator, LysR family	transcptional regulator, LysR family identified by match to protein family HMM PF00126; match to protein family HMM PF03466	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	transcriptional regulator, LysR-family	
ECOLI02335	Uncharacterized protein ypeB	Uncharacterized protein conserved in bacteria	Putative uncharacterized protein ypeB	conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VPA0582	Uncharacterized protein ypeB	Uncharacterized protein conserved in bacteria	Putative uncharacterized protein	Putative uncharacterized protein	Similar to unknown protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	identified by similarity to OMNI:SO3326 conserved hypothetical protein	identified by similarity to GB:CAD17121.1 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	
ECOLI02334	Uncharacterized protein yfeH	conserved hypothetical protein;	Putative transporter, member of the SLC10 carrier family; identified in a transposon mutagenesis screen as a gene involved in azole resistance; YMR034C is not an essential gene. [Source:SGD;Acc:S000004637]	similar to sp|Q05131 Saccharomyces cerevisiae YMR034c and DEHA0E11704g Debaryomyces hansenii IPF 11988.1, start by similarity	similar to sp|Q05131 Saccharomyces cerevisiae YMR034c singleton, start by similarity	Putative uncharacterized protein	similar to uniprot|Q05131 Saccharomyces cerevisiae YMR034c;	DEHA2E11110p;similar to uniprot|Q05131 Saccharomyces cerevisiae YMR034C;	Putative transmembrane protein	Symporter	Uncharacterized protein PA2026	Putative uncharacterized protein	Putative membrane protein	Sodium/bile acid symporter family protein	Predicted Na+-dependent transporter	Arsenical-resistance protein; possible sodium/bile acid symporter family	Putative sodium bile acid symporter family protein	Hypothetical protein yfeH	identified by match to protein family HMM PF01758 sodium/bile acid symporter family protein	similar to GP:2708271, and GP:2708271; identified by sequence similarity; putative sodium/bile acid symporter family	Putative exported protein	Putative exported protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Transporter, putative	Putative exported protein	sodium dependent transporter	Putative membrane protein	Sodium/bile acid symporter family protein	SODIUM/BILE ACID COTRANSPORTER HOMOLOG, SBF FAMILY	
ECOLI02336	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	similar to GB:M24278, SP:P15042, GB:M30255, PID:146613, PID:146615, GB:U00096, PID:1788750,  and PID:1816524; identified by sequence similarity; putative DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	DNA ligase	
ECOLI02337	Cell division protein zipA	Cell division protein zipA homolog	Cell division protein zipA homolog	Cell division protein zipA homolog	hypothetical cell division protein ZipA	Cell division protein zipA homolog	Cell division protein zipA homolog	Cell division protein zipA homolog	Cell division protein zipA homolog	Cell division protein zipA homolog	Cell division protein zipA homolog	Cell division protein zipA homolog	Residues 18 to 345 of 345 are 99 pct identical to residues 1 to 328 of a 328 aa protein from Escherichia coli K12 ref: NP_416907.1 cell division protein involved in FtsZ ring	Cell division protein zipA homolog	Cell division protein zipA homolog	IPR000694: Proline-rich region cell division protein involved in FtsZ ring	similar to Salmonella typhi CT18 cell division protein cell division protein	Cell division protein zipA homolog	cell division protein ZipA	Similar to: HI1101, ZIPA_HAEIN Cell division protein ZipA	Cell division protein ZipA protein	ZipA Secreted cell division protein	Cell division protein zipA homolog	identified by similarity to SP:P77173; match to protein family HMM PF04354; match to protein family HMM TIGR02205 putative cell division protein ZipA	cell division protein	involved in FtsZ ring; Code: D; COG: COG3115 cell division protein	Cell division protein ZipA	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 10924108; Product type rc : receptor putative Cell division protein zipA homolog	Code: D; COG: COG3115 cell division protein involved in FtsZ ring	
ECOLI02338	Protein cysZ	Protein cysZ homolog	Putative integral membrane protein	Protein cysZ homolog	Protein cysZ homolog	Cysteine synthase Z	Putative uncharacterized protein	Protein cysZ	Putative CysZ, uncharacterized protein involved in cysteine biosynthesis	Protein cysZ	Protein cysZ homolog	CysZ protein	Protein cysZ homolog	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by FrameD PUTATIVE TRANSMEMBRANE PROTEIN	Protein cysZ homolog	Protein cysZ homolog	Protein cysZ	SC4A7.23c, possible integral membrane protein, len: 274 aa; low similarities to SW:CYSZ_ECOLI (EMBL:AE000329) Escheichia coli CysZ protein, 253 aa; fasta scores: opt: 258 z-score: 295.2 E(): 4.6e-09; 25.8% identity in 244 aa overlap putative integral membrane protein	CysZ protein	Residues 1 to 253 of 253 are 98 pct identical to residues 1 to 253 of a 253 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288975.1 required for sulfate transport	Putative membrane protein	Sulfate transport protein CysZ	Putative uncharacterized protein	required for sulfate transport	similar to Salmonella typhi CT18 putative sulfate transport protein CysZ putative sulfate transport protein CysZ	Putative membrane protein	Putative cysZ protein	CysZ protein	Similar to: HI1102, CYSZ_HAEIN CysZ	
ECOLI02339	Cysteine synthase A	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase A	Cysteine synthase	Cysteine synthase	putative cysteine synthase A	InterPro: Pyridoxal-5-phosphate-dependent enzymes beta family	Cysteine synthase A	cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase A	CDS_ID OB0084 cysteine synthase A	Cysteine synthase	Cysteine synthase	
ECOLI02340	Phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	Histidine-containing phosphocarrier protein (Hpr protein) of Pts transport system	Phosphocarrier protein	PtsH	Phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	Catabolite repression protein crh	Phosphocarrier protein HPr	Phosphocarrier protein HPr	putative phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	identified by match to protein family HMM PF00381 phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	PTS system phosphocarrier protein	PMID: 9172326 best DB hits: BLAST: swissprot:O83598; PTHP_TREPA PHOSPHOCARRIER PROTEIN HPR; E=8e-11 pir:D69607; catabolite repression protein crh [validated] -; E=1e-09 embl:CAB10076.1; (Z97203) histidine containing protein; E=2e-09 COG: TP0589; COG1925 Phosphotransferase system, HPr-related proteins; E=9e-12 PFAM: PF00381; PTS HPr component phosphorylation si; E=5.8e-25 phosphocarrier protein HPr	Phosphocarrier protein HPr	Putative phosphotransferase system phosphohistidine-containing protein	Phosphocarrier protein HPr	Phosphocarrier HPr protein	Phosphocarrier protein Hpr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	
ECOLI02341	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Putative phosphoenolpyruvate-protein phosphotransferase	PtsI	Phosphoenolpyruvate-protein phosphotransferase	PtsI	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Putative multiphosphoryl transfer protein	Putative phosphoenolpyruvate-proteinphosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Multiphosphoryl transfer protein, putative	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	phosphoenolpyruvate-protein phosphotransferase	PTS system, glucose-specific EIIA/HPr/phosphoenolpyruvate-protein phosphotransferase components	Putative phosphoenolpyruvate-protein kinase	PTS system enzyme I	Phosphoenolpyruvate-protein phosphotransferase enzyme I	
ECOLI02342	Glucose-specific phosphotransferase enzyme IIA component	Glucose-specific phosphotransferase enzyme IIA component	Putative phosphoenolpyruvate-dependent sugar phosphotransferase	PTS system, IIA component	Crr	Phosphotransferase system IIA component	Glucose-specific phosphotransferase enzyme IIA component	Glucose-specific phosphotransferase enzyme IIA component	Lmo1017 protein	Glucose-specific phosphotransferase enzyme IIA component	Protein-N(Pi)-phosphohistidine-sugar phosphotransferase, PTS system, IIA component	putative PTS system, glucose-specific IIAcomponent	Glucose-specific phosphotransferase enzyme IIA component	Glucose-specific phosphotransferase enzyme IIA component	identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830 PTS system, glucose-specific IIA component, putative	PTS system, glucose-specific IIA component	PTS system, glucose-specific IIA component	PTS system, glucose-specific IIa component	Glucose-specific phosphotransferase enzyme IIA component	PTS system, glucose-specific enzyme II, A component	Putative PTS system component IIA	Pts system enzyme iia component	PTS system, glucose-specific IIA component	PTS system, glucose-specific IIA component	CDS_ID OB2758 PTS system glucose-specific enzyme II A component	Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable glucose specific	Glucose-specific phosphotransferase enzyme IIA component	Glucose-specific phosphotransferase enzyme IIA component	Glucose-specific PTS system IIA component	
ECOLI02343	Pyridoxine kinase	conserved hypothetical protein;	Putative pyridoxal kinase, a key enzyme in vitamin B6 metabolism; involved in bud-site selection; diploid mutants display a random rather than a bipolar budding pattern; similarity to yeast BUD16 and human pyridoxal kinase (PDXK). [Source:SGD;Acc:S000005310]	similar to sp|P39988 Saccharomyces cerevisiae YEL029c, start by similarity	Blr4233 protein	Putative pyridoxal kinase C6F6.11c [Source:GeneDB_Spombe;Acc:SPAC6F6.11c]	Pyridoxine kinase	similar to uniprot|P53727 Saccharomyces cerevisiae YNR027w;	DEHA2E06710p;similar to uniprot|P39988 Saccharomyces cerevisiae YEL029C BUD16 Protein involved in bud-site selection;	Pyridoxine kinase	Possible pyridoxine kinase	Probable pyridoxal kinase	Pyridoxine kinase	Pyridoxine kinase	Pyridoxal/pyridoxine/pyridoxamine kinase	Pyridoxine kinase	Pyridoxine kinase	Pyridoxal/pyridoxine/pyridoxamine kinase	Pyridoxine kinase	Pyridoxine kinase	Pyridoxine kinase	Pyridoxine kinase	similar to AX064267-1|CAC25374.1| percent identity: 54 in 260 aa putative pyridoxal/pyridoxine/pyridoxamine kinase	Putative pyridoxamine kinase	Residues 1 to 283 of 283 are 98 pct identical to residues 1 to 283 of a 283 aa protein from Escherichia coli K12 ref: NP_416913.1 pyridoxal-pyridoxine-pyridoxamine kinase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark pyridoxine kinase	pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase	similar to Salmonella typhi CT18 pyridoxine kinase pyridoxine kinase	Pyridoxine kinase	
ECOLI02344	Uncharacterized protein yfeK	Hypothetical protein yfeK	Putative uncharacterized protein yfeK	Residues 1 to 124 of 124 are 95 pct identical to residues 1 to 124 of a 124 aa protein from Escherichia coli K12 ref: NP_416914.1 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Uncharacterized protein yfeK	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfeK	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Conserved hypothetical exported protein precursor	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative periplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	
ECOLI02345	Uncharacterized protein yfeS	Lmo1750 protein	Lin1862 protein	conserved hypothetical protein	Complete genome	Molybdate metabolism regulator	Conserved protein	WGR domain protein	Putative uncharacterized protein	Putative uncharacterized protein	YfeS protein	Conserved protein	WGR domain-containing protein KEGG: ecx:EcHS_A2555 WGR domain-containing protein	hypothetical protein	Putative uncharacterized protein yfeS	
ECOLI02346	Cysteine synthase B	Cysteine synthase	hypothetical cysteine synthase	Cysteine synthase B	Cysteine synthase	Cysteine synthase	Cysteine synthase B	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase B	Cysteine synthase	SCE19A.10c, probable cysteine synthase, len: 316 aa; similar to many e.g. SW:CYSM_ECOLI (EMBL:M32101), CysM, Escherichia coli cysteine synthase B (303 aa), fasta scores; opt: 776 z-score: 884.3 E(): 0, 43.7% identity in 293 aa overlap. Highly similar to SW:CYSK_MYCTU (EMBL:Z73902) Mycobacterium tuberculosis probable cysteine synthase (323 aa) (72.4% identity in 322 aa overlap). Weak similarity to the N-terminus of SCF43A.11c (EMBL:AL096837) S.coelicolor probable threonine dehydratase (325 aa) (27.2% identity in 195 aa overlap). Contains Pfam match to entry PF00291 S_T_dehydratase, Pyridoxal-phosphate dependent enzymes and PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site putative cysteine synthase	Residues 27 to 329 of 329 are 98 pct identical to residues 1 to 303 of a 303 aa protein from Escherichia coli K12 ref: NP_416916.1 cysteine synthase B, O-acetylserine sulfhydrolase B	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase	Cysteine synthase B	Mb1371, cysM, len: 323 aa. Equivalent to Rv1336, len: 323 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 323 aa overlap). Probable cysM, cysteine synthase B (EC 4.2.99.8), similar to many e.g.  CYSM_ECOLI|P16703 Escherichia coli (303 aa), FASTA scores: opt: 720, E(): 4.6e-40, (41.1% identity in 302 aa overlap). Also similar to other Mycobacterium tuberculosis cysteine synthase subunits e.g. Rv1077, Rv2334, Rv0848, etc. Contains PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. BELONGS TO THE CYSTEINE SYNTHASE/CYSTATHIONINE BETA-SYNTHASE FAMILY. PROBABLE CYSTEINE SYNTHASE B CYSM (CSASE B) (O-acetylserine sulfhydrylase B) (O-acetylserine (Thiol)-lyase B)	IPR001216: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site; IPR001926: Pyridoxal-5'-phosphate-dependent enzyme, beta family cysteine synthase B (O-acetylserine sulfhydrolase B)	similar to Salmonella typhi CT18 cysteine synthase B cysteine synthase B	
ECOLI04273	Uncharacterized protein yuaO	pseudo	Putative uncharacterized protein	Putative RTX family exoprotein A gene	Autotransporter	Autotransporter	Putative adhesin	ORF28 unknown	HMW2A, high molecular weight adhesin 2	Putative surface-exposed virulence protein bigA	Outer membrane autotransporter barrel	Hemolysin-type calcium-binding protein	Code: UW; COG: COG5295 putative adhesin	Hemolysin-type calcium-binding region PFAM: Hemolysin-type calcium-binding region: (0.15) KEGG: tdn:Tmden_0243 hemolysin-type calcium-binding region, ev=3e-78, 36% identity	hypothetical protein	Putative adhesin	Adhesin aidA-I	Hemolysin-type calcium-binding region	transcript_id=ENSTBET00000001767	Adhesin	YadA C-terminal domain protein PFAM: YadA C-terminal domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein	PE-PGRS family protein	Hypothetical protein	Putative haemagglutinin-like (Or adhesin-like) with a signal peptide and a putative subtilisin-like serine protease domain	Adhesin	Membrane-anchored cell surface protein	hypothetical protein KEGG: ava:Ava_4160 VCBS	Outer membrane autotransporter barrel domain protein precursor	Putative uncharacterized protein	
ECOLI02347	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate ABC transporter, ATP-binding protein	Sulfate/thiosulfate import ATP-binding protein cysA	Molybdate ABC transporter, ATP-binding protein	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA 1	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein CysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	identified by similarity to SP:P16676; match to protein family HMM PF00005 sulfate ABC transporter, ATP-binding protein	similar to SP:P14788; identified by sequence similarity; putative sulfate ABC transporter, ATP-binding protein, putative	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Product confidence : putative Gene name confidence : hypothetical putative sulfate uptake ABC transporter ATP-binding protein	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	sulfate ABC transporter ATP-binding protein	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	Sulfate/thiosulfate import ATP-binding protein cysA	
ECOLI02348	Sulfate transport system permease protein cysW	Sulphate transport system permease protein CysW	Sulfate transport system permease protein cysW	similar to GP:15159840, and SP:P16702; identified by sequence similarity; putative sulfate ABC transporter, permease protein	Sulfate ABC transporter, permease protein	Sulfate transport system permease protein	Putative sulfate ABC transporter permease	SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW	Sulfate transport system permease protein CysW	Sulfate transport system permease protein cysW	CysW	PROBABLE SULFATE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER CYSW	Mb2420c, cysW, len: 272 aa. Equivalent to Rv2398c, len: 272 aa, from Mycobacterium tuberculosis strain H37Rv, (99.3% identity in 272 aa overlap). Probable cysW, sulfate-transport integral membrane protein ABC transporter (see citations below), similar to others e.g.  Q9K877|CYSW|BH3129 SULFATE ABC TRANSPORTER (PERMEASE) from Bacillus halodurans (287 aa), FASTA scores: opt: 765, E(): 4.1e-40, (43.8% identity in 249 aa overlap); P27370|CYSW_SYNP7 sulfate transport system (permease) protein from Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) (286 aa), FASTA scores: opt: 757, E(): 1.3e-39, (44.3% identity in 264 aa overlap); Q9I6K9|CYSW|PA0281 SULFATE TRANSPORT PROTEIN from Pseudomonas aeruginosa (289 aa), FASTA scores: opt: 753, E(): 2.3e-39, (44.4% identity in 250 aa overlap); P16702|P76534|CYSW_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE from Escherichia coli (291 aa), FASTA scores: opt: 633, E(): 5.7e-32, (38.2% identity in 267 aa overlap); etc.  Contains PS00402 Binding-protein-dependent transport systems inner membrane component signature. SIMILARITY WITH INTEGRAL MEMBRANE COMPONENTS OF OTHER BINDING-PROTEIN-DEPENDENT TRANSPORT SYSTEMS and BELONGS TO THE CYSTW SUBFAMILY. PROBABLE SULFATE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER CYSW	Sulphate transport system permease protein CysW	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), thiosulfate permease W protein	similar to Salmonella typhi CT18 sulphate transport system permease protein CysW sulphate transport system permease protein CysW	similar to BR1328, sulfate ABC transporter, permease protein CysW-2, sulfate ABC transporter, permease protein	ABC sulfate transporter, permease subunit CysW	Thiosulfate permease W protein	ortholog to Escherichia coli bnum: b2423; MultiFun: Cell structure 6.1; Metabolism 1.8.2; Transport 4.3.A.1.m, 4.S.178 thiosulfate permease W protein (ABC superfamily, membrane)	Code: P; COG: COG4208 ABC-type sulfate transport system permease component	Binding-protein-dependent transport systems inner membrane component	COG4208: ABC-type sulfate transport system permease component (CysW). ABC sulfate/thiosulfate transporter, inner membrane subunit CysW	Code: P; COG: COG4208 ABC-type sulfate transport system, permease component	sulfate ABC transporter, permease protein CysW identified by similarity to SP:P27370; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140	Sulfate ABC transporter, permease protein CysW	sulfate ABC transporter, permease protein CysW identified by similarity to SP:P27370; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140	sulfate ABC transporter permease component CysW	Sulfate ABC transporter, permease protein CysW	
ECOLI02349	Sulfate transport system permease protein cysT	ABC-type molybdate transport systems, permease component	ABC transport system permease protein PA	ABC transporter permease related protein	hypothetical sulfate transporter permease protein	ABC transporter, membrane spanning protein	Sulphate transport system permease protein CysT	Sulfate transport system permease protein cysT	Sulfate ABC transporter, permease protein	Sulfate ABC transporter, permease protein	Sulphate transport system permease protein	Putative sulfate ABC transporter permease	Sulfate, thiosulfate transport system permease T protein	Residues 1 to 277 of 277 are 100 pct identical to residues 1 to 277 of a 277 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288985.1 sulfate, thiosulfate transport system permease T protein	Sulfate transport system permease protein CysT	Sulfate transport system permease protein cysT	sulfate transport system permease protein	CysT	PROBABLE SULFATE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER CYST	Mb2421c, cysT, len: 283 aa. Equivalent to Rv2399c, len: 283 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 283 aa overlap). Probable cysT, sulfate-transport integral membrane protein ABC transporter (see citations below), similar to others e.g.  BAB48989|MLR1667 PERMEASE PROTEIN OF SULFATE ABC TRANSPORTER from Rhizobium loti (283 aa), FASTA scores: opt: 756, E(): 7.9e-40, (40.95% identity in 271 aa overlap); Q9K878|CYST|BH3128 SULFATE ABC TRANSPORTER (PERMEASE) from Bacillus halodurans (279 aa), FASTA scores: opt: 750, E(): 1.8e-39, (44.55% identity in 258 aa overlap); P16701|CYST_ECOLI|CYSU|CYST|B2424 from Escherichia coli (277 aa), FASTA scores: opt: 669, E(): 1.9e-34, (40.0% identity in 260 aa overlap); etc. Contains PS00402 Binding-protein-dependent transport systems inner membrane component signature, and PS00017 ATP/GTP-binding site motif A (P-loop). BELONGS TO THE CYSTW SUBFAMILY. PROBABLE SULFATE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER CYST	Sulphate transport system permease protein CysU	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), thiosulfate transport protein	similar to Salmonella typhi CT18 sulphate transport system permease protein CysT sulphate transport system permease protein CysT	ABC sulfate transporter, permease subunit CysT	sulfate transport system permease	Sulfate transport system permease protein cysT	ortholog to Escherichia coli bnum: b2424; MultiFun: Cell structure 6.1; Metabolism 1.8.2; Transport 4.3.A.1.m, 4.S.178 thiosulfate transport protein (ABC superfamily, membrane)	Code: O; COG: COG0555 sulfate, thiosulfate transport system permease T protein	COG0555: ABC-type sulfate transport system permease component (CysU). ABC sulfate/thiosulfate transporter, inner membrane subunit CysT	
ECOLI02350	Thiosulfate-binding protein	Thiosulphate-binding protein	Putative sulphate-binding protein	Thiosulfate-binding protein	similar to SP:P06997; identified by sequence similarity; putative sulfate ABC transporter, sulfate-binding protein, putative	Thiosulfate ABC transporter, periplasmic thiosulfate-binding protein	Sulfate ABC transporter, periplasmic sulfate- binding protein	Thiosulfate-binding protein	Putative transporter	THIOSULFATE-BINDING PROTEIN	Thiosulfate binding protein	sulfate-binding protein of ABC transporter	Residues 1 to 337 of 338 are 100 pct identical to residues 1 to 337 of a 338 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288986.1 thiosulfate binding protein	Thiosulfate-binding protein	Thiosulfate-binding protein cysP	sulfate transport system substrate-binding protein	Thiosulphate-binding protein	IPR000957: Prokaryotic sulfate-/thiosulfate-binding protein; IPR002052: N-6 Adenine-specific DNA methylase ABC superfamily (bind_prot), thiosulfate transport protein	similar to Salmonella typhi CT18 thiosulphate-binding protein precursor thiosulphate-binding protein precursor	similar to BR1330, sulfate ABC transporter, sulfate-binding protein, hypothetical hypothetical sulfate ABC transporter, sulfate-binding protein	ABC transporter, periplasmic thiosulfate-binding protein CysP	Thiosulfate-binding protein	ortholog to Escherichia coli bnum: b2425; MultiFun: Metabolism 1.8.2; Transport 4.3.A.1.p, 4.S.178 thiosulfate transport protein (ABC superfamily, peri_bind)	Code: P; COG: COG4150 thiosulfate binding protein	Prokaryotic sulfate-/thiosulfate-binding protein:Bacterial extracellular solute-binding protein, family 1	COG4150: ABC-type sulfate transport system periplasmic component (CysP). PF01547. ABC sulfate/thiosulfate transporter, periplasmic binding protein CysP	Code: P; COG: COG4150 thiosulfate binding protein	Thiosulphate-binding protein	sulfate ABC transporter periplasmic component CysP	
ECOLI02351	Oxidoreductase ucpA	Oxidoreductase ucpA	Oxidoreductase ucpA	Residues 1 to 285 of 285 are 98 pct identical to residues 1 to 285 of a 285 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288987.1 putative oxidoreductase	IPR002198: Short-chain dehydrogenase/reductase SDR; IPR002347: Glucose/ribitol dehydrogenase; IPR002424: Insect alcohol dehydrogenase family;IPR003560: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase putative oxidoreductase	similar to Salmonella typhi Ty2 putative oxidoreductase putative oxidoreductase	Oxidoreductase ucpA	Code: IQR; COG: COG1028 putative oxidoreductase	Code: IQR; COG: COG1028 putative oxidoreductase	Code: IQR; COG: COG1028 putative oxidoreductase	Pxidoreductase UcpA	Oxidoreductase UcpA	putative oxidoreductase Code: IQR; COG: COG1028	oxidoreductase UcpA	Putative uncharacterized protein	Oxidoreductase UcpA	Predicted oxidoredutase, sulfate metabolism protein	Oxidoreductase UcpA	Short-chain dehydrogenase/reductase SDR	Oxidoreductase UcpA	Putative uncharacterized protein	Putative uncharacterized protein	Oxidoreductase UcpA	Putative oxidoreductase	Oxidoreductase ucpA	3-oxoacyl-(Acyl-carrier-protein) reductase	3-oxoacyl-(Acyl-carrier-protein) reductase	3-hydroxybutyrate dehydrogenase type 2 (EC 1.1.1.30)(R-beta-hydroxybutyrate dehydrogenase)(Dehydrogenase/reductase SDR family member 6)(Oxidoreductase UCPA) [Source:UniProtKB/Swiss- Prot;Acc:Q9BUT1]	Putative oxidoreductase	
ECOLI02352	Uncharacterized HTH-type transcriptional regulator yfeT	Putative uncharacterized protein	HTH-type transcriptional regulator murR	CDS_ID OB0613 transcriptional regulator	Uncharacterized HTH-type transcriptional regulator CA_C0191	Transcriptional regulator, RpiR family	SC7H9.11, probable transcriptional regulator, len: 311 aa; similar to SW:HEXR_ECOLI (EMBL:AE000279) Escherichia coli Hex regulon repressor HexR, 289 aa; fasta scores: opt: 428 z-score: 486.6 E(): 1.4e-19; 31.9% identity in 285 aa overlap. Contains Pfam match to entry PF01418 HTH_6, Helix-turn-helix domain, rpiR family and PF01380 SIS, SIS domain. Also contains possible helix-turn-helix motif at residues 54..75 (+3.19 SD) putative transcriptional regulator	Residues 68 to 331 of 333 are 97 pct identical to residues 1 to 264 of a 285 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288988.1 orf, conserved hypothetical protein	Transcription regulator	transcriptional regulator, RpiR family	transcriptional regulator, RpiR family	transcriptional regulator, RpiR family	Code: K; COG: COG1737 conserved hypothetical protein	Gluconate operon transcriptional regulator, RpiR family	Code: K; COG: COG1737 conserved hypothetical protein	probable transcriptional regulator	transcriptional regulator, RpiR family	Code: K; COG: COG1737; orf conserved hypothetical protein	transcriptional regulator, RpiR family identified by match to protein family HMM PF01380; match to protein family HMM PF01418	RpiR family regulatory protein	conserved hypothetical protein Code: K; COG: COG1737	Transcriptional regulator RpiR family, putative	Transcriptional regulator, RpiR family protein	Transcriptional regulator, RpiR family	Putative phosphosugar-binding transcriptional regulator	Putative uncharacterized protein	Transcriptional regulator, RpiR family	Transcriptional regulator, RpiR family	Transcriptional regulator, RpiR family	
ECOLI02353	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	Glucokinase regulatory protein	N-acetylmuramic acid 6-phosphate etherase 1	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	putative GckR family protein	N-acetylmuramic acid 6-phosphate etherase	identified by match to protein family HMM PF01380; match to protein family HMM TIGR00274 glucokinase regulator-related protein	N-acetylmuramic acid 6-phosphate etherase 1	N-acetylmuramic acid 6-phosphate etherase	best DB hits: BLAST: gb:AAK03660.1; (AE006195) unknown [Pasteurella multocida]; E=2e-78 pir:G82291; glucokinase regulatory protein-related protein VC0690; E=3e-76 pir:G82352; GckR family protein VC0206 [imported] - Vibrio cholerae; E=8e-76 COG: VC0690; COG2103 Predicted sugar phosphate isomerase; E=3e-77 PFAM: PF01380; SIS domain; E=0.06 glucokinase regulatory protein-related protein	N-acetylmuramic acid 6-phosphate etherase	hypothetical protein	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase 2	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	N-acetylmuramic acid 6-phosphate etherase	Putative uncharacterized protein	SCD95A.40c, hypothetical protein, len: 311 aa; similar to SW:YFEU_ECOLI (EMBL:AE000330) Escherichia coli hypothetical 31.2 kD protein in CysP-AmiA intergenic region YfeU, 298 aa; fasta scores: opt: 973 z-score: 1053.7 E(): 0; 53.4% identity in 294 aa overlap conserved hypothetical protein SCD95A.40c	
ECOLI02354	PTS system N-acetylmuramic acid-specific EIIBC component	PTS system N-acetylmuramic acid-specific EIIBC component	PTS system N-acetylmuramic acid-specific EIIBC component	Putative PTS system IIBC component	PTS system, sucrose-specific IIBC component	PTS system, sucrose-specific IIBC component	PTS system, sucrose-specific IIBC component	PTS system N-acetylmuramic acid-specific EIIBC component	identified by match to protein family HMM PF00367; match to protein family HMM PF02378 PTS system, sucrose-specific IIBC component	PTS system N-acetylmuramic acid-specific EIIBC component	PTS system, sucrose-specific IIBC component	PTS system N-acetylmuramic acid-specific EIIBC component	PTS system N-acetylmuramic acid-specific EIIBC component	CDS_ID OB0615 PTS system sucrose-specific enzyme II BC component	PTS system, sucrose phosphotransferase enzyme II, BC component	PTS system N-acetylmuramic acid-specific EIIBC component	Residues 1 to 474 of 474 are 99 pct identical to residues 1 to 474 of a 474 aa protein from Escherichia coli K12 ref: NP_416924.1 putative PTS enzyme II	PTS system EIIBC component SAV0192	PTS system N-acetylmuramic acid-specific EIIBC component	Sucrose PTS, EIIBC	identified by match to protein family HMM PF00367; match to protein family HMM PF02378 PTS system, IIBC components	PTS system sucrose-specific IIBC component	PTS system, sucrose-specific IIC component	probable PTS sucrose-specific enzyme IIBC component; Molecular Function: sugar porter activity (GO:0005351), Biological Process: transport (GO:0006810), Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401), Cellular Component: membrane (GO:0016020),Molecular Functio Phosphotransferase system PTS, EIIB domain,Phosphotransferase system, EIIC	PTS system, sucrose-specific enzyme II, BC component	IPR001996: Phosphotransferase system PTS, EIIB domain putative phosphotransferase system IIB components	similar to Salmonella typhi CT18 putative PTS system IIBC component putative PTS system IIBC component	hypothetical protein, similar to sucrose phosphotransferase enzyme II	Ortholog of S. aureus MRSA252 (BX571856) SAR0193 sucrose-specific PTS tranporter protein	
ECOLI02355	UPF0214 protein yfeW	Putative beta-lactamase	Beta lactamase	Putative uncharacterized protein	UPF0214 protein yfeW	Family S12 unassigned peptidase	D-alanyl-D-alanine carboxypeptidease, putative	unknown	Putative uncharacterized protein	Putative esterase	Esterase, putative	UPF0214 protein yfeW	CDS_ID OB0667; cephalosporinase beta-lactamase	esterase	Beta-lactamase, putative	Similar to beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	identified by match to protein family HMM PF00144 beta-lactamase	Putative uncharacterized protein	PROBABLE LIPASE LIPE	Mb3804, lipE, len: 415 aa. Equivalent to Rv3775, len: 415 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 415 aa overlap). Probable lipE, hydrolase lipase (EC 3.1.-.-), equivalent to Q9CD95|LIPE|ML0119 PROBABLE HYDROLASE from Mycobacterium leprae (411 aa), FASTA scores: opt: 2418, E(): 6.4e-144, (84.75% identity in 406 aa overlap). Also similar to other esterases e.g. Q9ABH2|CC0255 ESTERASE A from Caulobacter crescentus (374 aa), FASTA scores: opt: 427, E(): 2.4e-19, (28.9% identity in 391 aa overlap); O87861|ESTA ESTERASE A from Streptomyces chrysomallus (389 aa), FASTA scores: opt: 417, E(): 1e-18, (31.0% identity in 361 aa overlap); Q9RK50|SCF12.08 PUTATIVE ESTERASE from Streptomyces coelicolor (376 aa), FASTA scores: opt: 385, E(): 1e-16, (31.35% identity in 373 aa overlap); etc. Also similar to proteins from Mycobacterium tuberculosis e.g.  P71778|Rv1497|MTCY277.19 HYPOTHETICAL 45.8 KDA PROTEIN (429 aa), FASTA scores: opt: 457, E(): 3.5e-21, (30.4% identity in 395 aa overlap). PUTATIVE LIPASE LIPE	putative beta-lactamase YbbE	penicillin binding protein	Putative uncharacterized protein yvdA	putative beta-lactamase class C	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative beta-lactamase	Hypothetical protein	
ECOLI02356	Uncharacterized protein yfeX	Putative uncharacterized protein	TyrA protein	Putative uncharacterized protein STY2683	putative TyrA protein	Hypothetical protein yfeX	TyrA protein	Melanin biosynthesis protein TyrA, putative	Putative uncharacterized protein	TyrA protein	Putative uncharacterized protein	TyrA protein	Residues 1 to 308 of 308 are 98 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli K12 ref: NP_416926.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative iron-dependent peroxidase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative dyp-type peroxidase	melanin biosynthesis protein TyrA	Predicted iron-dependent peroxidase Hypothetical protein	Similar to Q9I078 Hypothetical protein PA2765 from Pseudomonas aeruginosa (299 aa). FASTA: opt: 656 Z-score: 793.3 E(): 2.4e-36 Smith-Waterman score: 656; 36.678 identity in 289 aa overlap ORF ftt0086 conserved hypothetical protein	Dyp-type peroxidase family protein	Putative iron-dependent peroxidase	identified by similarity to GP:6648543; match to protein family HMM PF04261; match to protein family HMM TIGR01413 putative melanin biosynthesis protein TyrA	identified by match to protein family HMM PF04261; match to protein family HMM TIGR01413 Dyp-type peroxidase family protein	Best Blastp Hit: pir||G81158 conserved hypothetical protein NMB0786 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7226018|gb|AAF41199.1| (AE002432) conserved hypothetical protein [Neisseria meningitidis MC58] conserved hypothetical protein	Code: P; COG: COG2837 conserved hypothetical protein	
ECOLI02357	Uncharacterized protein yfeY	Hypothetical protein yfeY	Putative exported protein	Putative uncharacterized protein	Residues 1 to 191 of 191 are 99 pct identical to residues 1 to 191 of a 191 aa protein from Escherichia coli K12 ref: NP_416927.1 orf, conserved hypothetical protein	Putative lipoprotein	Similar to putative lipoprotein YfeY protein of Escherichia coli	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	Putative outer membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative lipoprotein precursor	Putative uncharacterized protein yfeY	Lipoprotein precursor	Putative lipoprotein precursor	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yfeY	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein precursor	Predicted protein	Putative lipoprotein	Putative lipoprotein	
ECOLI02358	Inner membrane protein yfeZ	Hypothetical protein yfeZ	Putative uncharacterized protein	Residues 1 to 151 of 151 are 97 pct identical to residues 1 to 151 of a 151 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288994.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function ; putative membrane protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfeZ	inner membrane protein YfeZ	conserved hypothetical protein	conserved hypothetical protein KEGG: ppr:PBPRA0858 hypothetical protein	conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein yfeZ	Putative uncharacterized protein	Putative inner membrane protein YfeZ	Putative uncharacterized protein	Predicted inner membrane protein	Putative inner membrane protein YfeZ	Putative uncharacterized protein	Putative inner membrane protein YfeZ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02359	Acetyltransferase ypeA	Putative acetyltransferase	Putative acetyltransferase	Acetyltransferase	Acetyltransferase ypeA	Putative acetyltransferase	Acetyltransferase ypeA	Acetyltransferase, putative	Acetyltransferase ECA0875	PMID: 2828880 best DB hits: BLAST: pir:A65018; hypothetical protein b2434 - Escherichia coli (strain; E=2e-19 gb:AAG57552.1; AE005473_7 (AE005473) Z3699 gene product; E=3e-19 pir:F82455; probable acetyltransferase VCA0470 [imported] - Vibrio; E=3e-10 COG: ypeA; COG0456 Acetyltransferases; E=2e-20 VNG1215G; COG0454 Histone acetyltransferase HPA2 and related; E=1e-04 PA4534; COG0456 Acetyltransferases; E=1e-04 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.7e-26 conserved hypothetical protein	Acetyltransferase, GNAT family	Acetyltransferase, GNAT family	Putative acetyltransferase	Acetyltransferase ypeA	Acetyltransferase, GNAT family	2SCG1.25, possible acetyltransferase, len: 141 aa; similar to TR:CAB72694 (EMBL:AL139074) Campylobacter jejuni putative acetyltransferase CJ0225, 148 aa; fasta scores: opt: 187 z-score: 246.3 E(): 3e-06; 26.5% identity in 132 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf, Acetyltransferase (GNAT) family putative acetyltransferase	Acetyltransferase	Residues 1 to 178 of 178 are 99 pct identical to residues 1 to 178 of a 178 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_288995.1 orf, conserved hypothetical protein	Uncharacterized N-acetyltransferase YPO3031/y1452/YP_2654	Acetyltransferase plu1384	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	putative acetyltransferase	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	Acetyltransferase YPTB2753	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative acyltransferase	Acetyltransferase ypeA	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	GCN5-related N-acetyltransferase	Code: R; COG: COG0456 conserved hypothetical protein	
ECOLI02360	Probable N-acetylmuramoyl-L-alanine amidase amiA	similar to GB:M13143, SP:P03952,  and PID:190263; identified by sequence similarity; putative N-acetylmuramoyl-L-alanine amidase, putative	N-acetylmuramoyl-L-alanine amidase	Germination specific N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase, putative	N-acetylmuramoyl-L-alanine amidase	Probable N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase CwlD	N-acetylmuramoyl-L-alanine amidase	Putative uncharacterized protein BB0666	N-acetylmuramoyl-L-alanine amidase 50K	AmiC protein	Probable N-acetylmuramoyl-L-alanine amidase amiA	identified by match to protein family HMM PF01520 germination-specific N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase, family 3	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	Putative N-acetylmuramoyl-L-alanine amidase	Germination-specific N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-l-alanine amidase I	CDS_ID OB0195; autolysis germination specific N-acetylmuramoyl-L-alanine amidase	Putative N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase, family 3	Amidase, germination specific	Putative N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	Residues 1 to 289 of 289 are 100 pct identical to residues 1 to 289 of a 289 aa protein from Escherichia coli O157:H7 ref: NP_311333.1 N-acetylmuramoyl-l-alanine amidase I	N-Acetylmuramoyl Alanine Amidase	
ECOLI02361	Coproporphyrinogen 3 oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen 3 oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen III oxidase, aerobic, degenerate	Putative coproporphyrinogen III oxidase, aerobic	Coproporphyrinogen 3 oxidase, aerobic	similar to GP:15157401; identified by sequence similarity; putative coproporphyrinogen III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen 3 oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE COPROPORPHYRINOGEN III OXIDASE, AEROBIC PROTEIN	Coproporphyrinogen-III oxidase, aerobic	Coproporphyrinogen-III oxidase, aerobic	coproporphyrinogen III oxidase	Coproporphyrinogen 3 oxidase, aerobic	Coproporphyrinogen 3 oxidase, aerobic	
ECOLI02362	HTH-type transcriptional regulator eutR	Putative AraC-family transcriptional regulator	Ethanolamine operon Regulatory protein	Transcriptional regulator, araC family	Putative ARAC-type regulatory protein	similar to Escherichia coli K12 putative ARAC-type regulatory protein gi: 1788778 (351 aa). BLAST with identity of 96% in 350 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	IPR000005: Helix-turn-helix, AraC type putative regulator ethanolamine operon (AraC/XylS family)	similar to Salmonella typhi Ty2 ethanolamine operon transcriptional regulator ethanolamine operon transcriptional regulator	HTH-type transcriptional regulator eutR	Transcriptional regulator, AraC family,	identified by similarity to SP:P36547; match to protein family HMM PF00165 transcriptional regulator, AraC family	Helix-turn-helix, AraC type	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	transcriptional regulator, AraC family	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Transcriptional regulator, AraC family	transcriptional regulator, araC family identified by match to protein family HMM PF00165	Ethanolamine operon regulatory protein	Putative ARAC-type regulatory protein	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: bur:Bcep18194_A3316 transcriptional regulator, AraC family	transcriptional regulator, AraC family	transcriptional regulator, AraC family SMART: helix-turn-helix- domain containing protein, AraC type KEGG: rfr:Rfer_0584 transcriptional regulator, AraC family	Helix-turn-helix-domain containing protein, AraC type	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: bcn:Bcen_2919 transcriptional regulator, AraC family	putative ethanolamine operon transcriptional regulator Putative ethanolamine operon transcriptional regulator, Family membership	Transcriptional regulator, AraC family	HTH-type transcriptional regulator eutR Ethanolamine operon regulatory protein; identified by match to protein family HMM PF00165	Putative transcriptional regulatory protein, AraC family; putative eutR-like	
ECOLI02363	Ethanolamine utilization protein eutK	Ethanolamine utilization protein EutK	Ethanolamine utilization protein eutK	Putative uncharacterized protein	Residues 1 to 168 of 168 are 98 pct identical to residues 1 to 168 of a 168 aa protein from Escherichia coli K12 ref: NP_416933.1 orf, conserved hypothetical protein	similar to Salmonella typhi CT18 ethanolamine utilization protein EutK ethanolamine utilization protein EutK	Ethanolamine utilization protein eutK	Code: QC; COG: COG4577 conserved hypothetical protein	Code: QC; COG: COG4577 conserved hypothetical protein	Code: QC; COG: COG4577; orf conserved hypothetical protein	Ethanolamine utilization protein EutK	Ethanolamine utilization protein EutK	conserved hypothetical protein Code: QC; COG: COG4577	ethanolamine utilization protein EutK	Putative carboxysome structural protein, ethanolamine utilization	Putative uncharacterized protein	Putative ethanolamine utilization protein EutK	Predicted carboxysome structural protein with predicted role in ethanolamine utilization	Putative ethanolamine utilization protein EutK	Microcompartments protein	Putative ethanolamine utilization protein EutK	Putative uncharacterized protein	Putative uncharacterized protein	Putative ethanolamine utilization protein EutK	Ethanolamine utilization protein EutK	Putative ethanolamine utilization protein EutK	Ethanolamine utilization protein EutK	Ethanolamine utilization protein EutK	Ethanolamine utilization protein EutK	
ECOLI02364	Ethanolamine utilization protein eutL	Ethanolamine utilization protein	Ethanolamine utilization protein EutL	Ethanolamine utilization protein eutL	Lmo1177 protein	Ethanolamine utilization protein eutL	Ethanolamine utilization protein eutL	Putative uncharacterized protein	Lin1141 protein	Residues 1 to 219 of 219 are 98 pct identical to residues 1 to 219 of a 219 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289000.1 orf, conserved hypothetical protein	putative carboxysome structural protein, ethanolamine utilization	similar to Salmonella typhi CT18 ethanolamine utilization protein EutL ethanolamine utilization protein EutL	identified by similarity to SP:Q9ZFU9; match to protein family HMM PF06000 ethanolamine utilization protein	Ethanolamine utilization protein eutL	Code: E; COG: COG4816 Ethanolamine utilization protein eutL	Code: E; COG: COG4816 conserved hypothetical protein	Code: E; COG: COG4816; orf conserved hypothetical protein	Ethanolamine utilization protein EutL	hypothetical protein	ethanolamine utilization protein EutL identified by similarity to SP:Q9ZFU9; match to protein family HMM PF00936	Ethanolamine utilization protein EutL	Microcompartments protein	microcompartments protein PFAM: microcompartments protein KEGG: ctc:CTC02174 ethanolamine utilization protein eutL	Ethanolamine utilization protein EutL, putative	putative ethanolamine/propanediol utilization protein	EutL protein	conserved hypothetical protein Code: E; COG: COG4816	ethanolamine utilization protein EutL	Microcompartments protein	
ECOLI02365	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase light chain	similar to Salmonella typhi CT18 ethanolamine ammonia-lyase light chain ethanolamine ammonia-lyase light chain	identified by similarity to SP:P19636; match to protein family HMM PF05985 ethanolamine ammonia-lyase, light chain	Ethanolamine ammonia-lyase light chain	Code: E; COG: COG4302 ethanolamine ammonia-lyase, light chain	Code: E; COG: COG4302 ethanolamine ammonia-lyase, light chain	Code: E; COG: COG4302 ethanolamine ammonia-lyase, light chain	Ethanolamine ammonia-lyase light chain	hypothetical protein	ethanolamine ammonia-lyase, small subunit identified by similarity to SP:P19636; match to protein family HMM PF05985	Ethanolamine ammonia-lyase light chain	Ethanolamine ammonia-lyase	Ethanolamine ammonia-lyase PFAM: Ethanolamine ammonia-lyase light chain KEGG: stm:STM2457 ethanolamine ammonia-lyase, light chain	Ethanolamine ammonia-lyase light chain, putative	Ethanolamine ammonia-lyase	putative ethanolamine/propanediol ammonia-lyase light chain	EutC protein	Ethanolamine ammonia-lyase light chain (Ethanolamine ammonia-lyase small subunit) Evidence 2b : Function of strongly homologous gene; Product type e : enzyme	ethanolamine ammonia-lyase small subunit	
ECOLI02366	Ethanolamine ammonia-lyase heavy chain	Ethanolamine ammonia lyase heavy chain	Ethanolamine ammonia-lyase large subunit	Ethanolamine ammonia-lyase heavy chain	EutB protein	Ethanolamine ammonia-lyase heavy chain	Ethanolamine ammonia-lyase, heavy chain	Ethanolamine ammonia-lyase heavy chain	Ethanolamine ammonia-lyase heavy chain	Ethanolamine ammonia lyase large subunit	EutB protein	Ethanolamine ammonia-lyase heavy chain	ethanolamine ammonia-lyase, heavy chain	similar to Salmonella typhi CT18 ethanolamine ammonia-lyase heavy chain ethanolamine ammonia-lyase heavy chain	identified by similarity to SP:P19635 ethanolamine ammonia-lyase heavy chain	Ethanolamine ammonia-lyase heavy chain	Code: E; COG: COG4303 ethanolamine ammonia-lyase, heavy chain	Ethanolamine ammonia-lyase heavy chain	hypothetical protein	ethanolamine ammonia-lyase, large subunit identified by similarity to SP:P19635; match to protein family HMM PF06751	Probable regulatory subunit of ethanolamine ammonia-lyase	Ethanolamine ammonia lyase large subunit	Ethanolamine ammonia lyase large subunit PFAM: Ethanolamine ammonia lyase large subunit KEGG: stm:STM2458 ethanolamine ammonia-lyase, heavy chain	ethanolamine ammonia-lyase, large subunit/small subunit	Ethanolamine ammonia-lyase large subunit, putative	putative ethanolamine/propanediol ammonia-lyase heavy chain	EutB protein	putative regulatory subunit of ethanolamine ammonia-lyase	Ethanolamine ammonia lyase large subunit	
ECOLI02367	Putative prophage CPZ-55 integrase	Site-specific recombinase, phage integrase family	Integrase	Integrase	Putative phage integrase	Integrase	identified by match to protein family HMM PF00589 prophage PSPPH01, site-specific recombinase, phage integrase family	identified by match to protein family HMM PF00589 site-specific recombinase, phage integrase family	Phage integrase	Site-specific recombinase, prophage lsa1 integrase	phage integrase	Integrase	DNA integration/recombination/inversion protein	probable cp4-like integrase protein COG0582 Integrase	phage integrase family protein PFAM: phage integrase family protein KEGG: psp:PSPPH_0667 prophage PSPPH01, site-specific recombinase, phage integrase family	phage integrase family protein PFAM: phage integrase family protein KEGG: psp:PSPPH_0667 prophage PSPPH01, site-specific recombinase, phage integrase family	Integrase	Integrase	phage integrase	Phage integrase family protein	Phage integrase family protein	Putative site-specific recombinase, phage integrase family	Integrase family protein	CPZ-55 prophage; predicted integrase	Integrase family protein	Site-specific recombinase, phage integrase family protein	Putative uncharacterized protein	Integrase family protein	Integrase family protein	
ECOLI02368	Uncharacterized protein yffL	
ECOLI02368	Uncharacterized protein yffL	
ECOLI02369	Uncharacterized protein yffM	
ECOLI02370	Uncharacterized protein yffN	
ECOLI02371	Uncharacterized protein yffO	
ECOLI02372	Uncharacterized protein yffP	
ECOLI02373	Uncharacterized protein yffQ	
ECOLI02374	Uncharacterized protein yffR	
ECOLI02375	Uncharacterized protein yffS	Putative uncharacterized protein	
ECOLI02376	Ethanolamine utilization protein eutA	Ethanolamine utilization protein	Putative ethanolamine utilization protein EutA	EutA protein	Ethanolamine utilization protein eutA	Ethanolamine utilization protein	Ethanolamine utilization protein eutA	Ethanolamine ammonia lyase reactivating factor EutA	EutA protein	Residues 97 to 457 of 457 are 97 pct identical to residues 107 to 467 of a 467 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289003.1 orf, conserved hypothetical protein	Ethanolamine utilization protein	similar to Salmonella typhi CT18 putative ethanolamine utilization protein EutA putative ethanolamine utilization protein EutA	identified by similarity to SP:Q9ZFV2 ethanolamine utilization protein EutA	Ethanolamine utilization protein eutA	identified by similarity to SP:Q9ZFV2 ethanolamine utilization protein EutA	Code: E; COG: COG4819 conserved hypothetical protein	Ethanolamine utilization protein EutA	hypothetical protein	ethanolamine utilization protein EutA identified by similarity to SP:Q9ZFV2; match to protein family HMM PF06277	Ethanolamine utilization protein EutA	Ethanolamine utilisation EutA	Ethanolamine utilisation EutA PFAM: Ethanolamine utilisation EutA KEGG: stm:STM2459 CPPZ-55 prophage; chaperonin in ethanolamine utilization	Ethanolamine utilization protein EutA, putative	putative ethanolamine/propanediol utilisation protein	EutA protein	conserved hypothetical protein Code: E; COG: COG4819	ethanolamine utilization protein EutA	Ethanolamine utilisation EutA	Ethanolamine utilisation EutA	
ECOLI02377	Ethanolamine utilization protein eutH	Ethanolamine utilization protein	Ethanolamine utilization protein EutH	Probable transporter	Putative membrane protein	Lmo1186 protein	Ethanolamine utilization protein eutH	Ethanolamine permease	Ethanolamine utilization; homolog of Salmonella putative transport protein	CDS_ID OB2330 ethanolamine transporter	Lin1150 protein	putative transport protein, ethanolamine utilization	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	identified by similarity to SP:P76552; match to protein family HMM PF04346 membrane protein, putative	Ethanolamine utilization protein eutH	identified by similarity to SP:P41796; match to protein family HMM PF04346 ethanolamine utilization protein EutH	ethanolamine utilization; similar to Salmonella putative transport protein; Code: E; COG: COG3192 EutH	Ethanolamine utilization protein EutH	ethanolamine utilization protein EutH identified by similarity to SP:P41796; match to protein family HMM PF04346	Ethanolamine utilization transport protein EutH	ethanolamine transporter (ethanolamine utilization) identified by match to protein family HMM PF04346	Ethanolamine utilisation protein, EutH PFAM: Ethanolamine utilisation protein, EutH KEGG: pfl:PFL_5470 ethanolamine utilization protein EutH	Ethanolamine utilisation protein, EutH PFAM: Ethanolamine utilisation protein, EutH KEGG: ecp:ECP_2464 ethanolamine utilization protein EutH	Ethanolamine utilization protein (Transporter), putative	putative ethanolamine/propanediol transporter	putative transporter	EutH protein	putative ethanolamine utilization transport protein EutH	Ethanolamine utilisation protein, EutH	
ECOLI02378	Ethanolamine utilization protein eutG	Alcohol dehydrogenase, iron-containing	375aa long hypothetical alchol dehydrogenase	Alcohol dehydrogenase, iron-containing	Alcohol dehydrogenase	Probable iron-containing alcohol dehydrogenase	Putative alchohol dehydrogenase	Related to 1,3-propanediol dehydrogenase	Ethanolamine utilization protein eutG	Iron-containing alcohol dehydrogenase	PMID: 88038383 best DB hits: BLAST: swissprot:Q09669; ADHF_SCHPO PUTATIVE IRON ALCOHOL DEHYDROGENASE; E=5e-46 gb:AAD43989.1; U59485_16 (U59485) AttL [Agrobacterium tumefaciens]; E=5e-45 gb:AAG58733.1; AE005585_7 (AE005585) putative oxidoreductase; E=6e-42 COG: yiaY; COG1454 Alcohol dehydrogenase IV; E=3e-42 PFAM: PF00465; Iron-containing alcohol dehydrogenas; E=3.3e-58 putative iron alcohol dehydrogenase	glimmer prediction; similar to Agrobacterium tumefaciens AttL (accession AAD43989); iron-containing alcohol  family, PF00465 putative alcohol	Ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase	Alcohol dehydrogenase, iron-containing	Fe-containing alcohol dehydrogenase	Iron alcohol dehydrogenase protein	alcohol dehydrogenase	IPR001670: Iron-containing alcohol dehydrogenase paral putative transport protein in ethanolamine utilization	similar to Salmonella typhi CT18 putative alchohol dehydrogenase putative alchohol dehydrogenase	Ethanolamine utilization protein eutG	Fe-containing alcohol dehydrogenase	Iron-containing alcohol dehydrogenase	ethanolamine utilization; similar to Salmonella enzyme, similar to iron-containing alcohol dehydrogenase; Code: C; COG: COG1454 EutG	iron-containing alcohol dehydrogenase	iron-containing alcohol dehydrogenase	Iron-containing alcohol dehydrogenase	alcohol dehydrogenase, iron-containing	Iron-containing alcohol dehydrogenase	Ethanolamine utilization protein EutG	
ECOLI02379	Ethanolamine utilization protein eutJ	Probable ethanolamine utilization protein	Lmo1161 protein	Ethanolamine utilization protein eutJ	Ethanolamine utilization; homolog of Salmonella gene	Lin1125 protein	IPR001023: Heat shock protein Hsp70 paral putative heatshock protein (Hsp70)	similar to Salmonella typhi CT18 putative ethanolamine utilization protein EutJ putative ethanolamine utilization protein EutJ	identified by similarity to SP:P41794 ethanolamine utilization protein	Ethanolamine utilization protein eutJ	ethanolamine utilization; similar to Salmonella protein; Code: E; COG: COG4820 EutJ	identified by similarity to SP:P41794; match to protein family HMM TIGR02529 ethanolamine utilization protein EutJ	similar to Salmonella protein; Code: E; COG: COG4820 ethanolamine utilization	ethanolamine utilization protein EutJ	ethanolamine utilization protein eutJ	Ethanolamine utilization protein EutJ	hypothetical protein similarity to COG1077 HSP70 class molecular chaperones involved in cell morphogenesis	Ethanolamine utilization protein EutJ	Ethanolamine utilization protein EutJ family protein	ethanolamine utilization protein EutJ family protein TIGRFAM: ethanolamine utilization protein EutJ family protein KEGG: dps:DP3038 probable ethanolamine utilization protein (EutJ)	ethanolamine utilization protein EutJ	Ethanolamine utilization protein EutJ	EutJ protein	ethanolamine utilization protein EutJ putative chaperonin	Ethanolamine utilization protein EutJ family protein	ethanolamine utilization protein EutJ	Putative ethanolamine utilization protein	Ethanolamine utilization protein	Ethanolamine utilization protein EutJ family protein	
ECOLI02380	Ethanolamine utilization protein eutE	Ethanolamine utilization protein eutE	PMID: 11677609 best DB hits: BLAST: swissprot:P41793; EUTE_SALTY ETHANOLAMINE UTILIZATION PROTEIN EUTE; E=5e-84 gb:AAG57564.1; AE005474_12 (AE005474) ethanolamine utilization; E=1e-83 swissprot:P77445; EUTE_ECOLI ETHANOLAMINE UTILIZATION PROTEIN EUTE; E=5e-83 COG: eutE; COG1012 NAD-dependent aldehyde dehydrogenases; E=5e-84 PFAM: PF00171; Aldehyde dehydrogenase family; E=0.21 ethanolamine utilization protein EutE	Ethanolamine utilization; similar to acetaldehyde dehydrogenase	putative aldehyde oxidoreductase in ethanolamine utilization	similar to Salmonella typhi CT18 putative aldehyde dehydrogenase putative aldehyde dehydrogenase	Ethanolamine utilization protein eutE	ethanolamine utilization; similar to acetaldehyde dehydrogenase; Code: C; COG: COG1012 EutE	similar to acetaldehyde dehydrogenase; Code: C; COG: COG1012 ethanolamine utilization	Ethanolamine utilization protein EutE	Ethanolamine utilization protein EutE acetaldehyde dehydrogenase	aldehyde dehydrogenase PFAM: aldehyde dehydrogenase KEGG: rba:RB2579 ethanolamine utilization protein EutE	aldehyde dehydrogenase PFAM: aldehyde dehydrogenase KEGG: dps:DP3039 probable ethanolamine utilization protein (EutE)	aldehyde-alcohol dehydrogenase, putative	succinate-semialdehyde dehydrogenase [NAD(P)+]	ethanolamine utilization protein EutE acetaldehyde dehydrogenase	Ethanolamine utilization protein	Aldehyde dehydrogenase	Putative uncharacterized protein	Ethanolamine utilization protein EutE	Succinate-semialdehyde dehydrogenase	Predicted aldehyde dehydrogenase, ethanolamine utilization protein	Aldehyde Dehydrogenase	Ethanolamine utilization protein EutE	Aldehyde Dehydrogenase_	Ethanolamine utilization protein EutE	Putative uncharacterized protein	Putative uncharacterized protein	Aldehyde dehydrogenase	
ECOLI02381	Ethanolamine utilization protein eutN	Putative carboxysome peptide B	Ethanolamine utilization protein eutN	Detox protein	Carboxysome peptide B	IPR004992: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml putative detox protein in ethanolamine utilization	similar to Salmonella typhi CT18 putative ethanolamine utilization protein EutN putative ethanolamine utilization protein EutN	putative carboxysome peptide B	Ethanolamine utilization protein eutN	Ethanolamine utilization protein EutN/carboxysome structural protein Ccml	Code: QC; COG: COG4576 detox protein	identified by similarity to SP:P41792; match to protein family HMM PF03319 ethanolamine utilization protein EutN	Code: QC; COG: COG4576 detox protein	putative carboxysome peptide B	carbon dioxide concentrating mechanism protein CcmL identified by similarity to SP:P72759; match to protein family HMM PF03319	Putative carboxysome peptide B	Ethanolamine utilization protein EutN/carboxysome structural protein Ccml	Ethanolamine utilization protein EutN	putative carboxysome peptide B	Carboxysome peptide A	Detox protein	Ethanolamine utilization protein EutN/carboxysome structural protein Ccml PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml KEGG: dde:Dde_3273 ethanolamine utilization protein EutN	Ethanolamine utilisation protein EutN	putative carboxysome peptide B COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion]	Ethanolamine utilization protein EutN/carboxysome structural protein Ccml PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml KEGG: sbo:SBO_2471 detox protein	Putative carboxysome peptide B	ethanolamine utilization protein eutN	Ethanolamine utilization protein EutN/carboxysome structural protein Ccml PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml KEGG: nha:Nham_4336 ethanolamine utilization protein EutN/carboxysome structural protein CcmL	Putative ethanolamine utilization protein EutN	
ECOLI02382	Ethanolamine utilization protein eutM	Carbon dioxide-concentrating mechanism protein ccmK	Propanediol utilization protein	Microcompartment protein	Carbon dioxide concentrating mechanism protein	Ethanolamine utilization protein eutM precursor	Detox protein	carbon dioxide concentrating mechanism protein CcmK putative carboxysome assembly protein	Carbon dioxide-concentrating mechanism protein ccmK	IPR000249: Bacterial microcompartments protein putative detox protein in ethanolamine utilization	similar to Salmonella typhi Ty2 putative ethanolamine utilization protein EutN putative ethanolamine utilization protein EutN	carboxysome shell protein CsoS1	Ethanolamine utilization protein eutM	Carboxysome shell protein CsoS1	Code: QC; COG: COG4577 detox protein	identified by match to protein family HMM PF00936 bacterial microcompartments family protein	Code: QC; COG: COG4577 detox protein	carboxysome shell peptide, CsoS1	microcompartments protein	Carboxysome shell protein CsoS1	Ethanolamine utilization protein EutM	carboxysome shell peptide, CsoS1	Carbon dioxide concentrating mechanism protein ccmK	ethanolamine utilization protein EutM identified by similarity to SP:P41791; match to protein family HMM PF00936	Microcompartments protein	Detox protein	microcompartments protein PFAM: microcompartments protein KEGG: sbo:SBO_2472 detox protein	carboxysome shell protein CsoS1 COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion]	Microcompartments protein	
ECOLI02383	Ethanolamine utilization protein eutD	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphotransacetylase	Putative phosphate acetyltransferase Pta	Putative phosphate acetyltransferase	Putative phosphate acyltransferase	Phosphate acetyltransferase	Probable ethanolamine utilization protein	Pta protein	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Phosphate acetyltransferase	Ethanolamine utilization protein eutD	Phosphate acetyltransferase	identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651 phosphate acetyltransferase	Phosphate acetyltransferase	Product confidence : putative Gene name confidence : putative putative phosphate acetyltransferase protein	Phosphate acetyltransferase	Phosphotransacetylase	phosphotransacetylase	Putative phosphotransacetylase	
ECOLI02384	Ethanolamine utilization cobalamin adenosyltransferase	Lmo1181 protein	Ethanolamine utilization cobalamin adenosyltransferase	Putative uncharacterized protein	Lin1145 protein	putative cobalamin adenosyltransferase, ethanolamine utilization	similar to Salmonella typhi CT18 putative cobalamin adenosyltransferase putative cobalamin adenosyltransferase	identified by similarity to GP:18144564; match to protein family HMM PF01923 conserved hypothetical protein	Ethanolamine utilization cobalamin adenosyltransferase	Code: E; COG: COG4812 conserved hypothetical protein	Code: E; COG: COG4812 conserved hypothetical protein	Ethanolamine utilization cobalamin adenosyltransferase	hypothetical protein	Ethanolamine utilization cobalamin adenosyltransferase	cobalamin adenosyltransferase PFAM: cobalamin adenosyltransferase KEGG: ecp:ECP_2471 ethanolamine utilization cobalamin adenosyltransferase	putative ethanolamine/propanediol utilization cobalamin adenosyltransferase	Complete genome	putative cobalamin adenosyltransferase in ethanolamine utilization	Cobalamin adenosyltransferase	Putative cobalamin adenosyltransferase in ethanolamine utilization	Putative uncharacterized protein	Ethanolamine utilization cobalamin adenosyltransferase	Cobalamin adenosyltransferase	Predicted cobalamin adenosyltransferase in ethanolamine utilization	Ethanolamine utilization cobalamin adenosyltransferase	Cob(I)yrinic acid a,c-diamide adenosyltransferase	Ethanolamine utilization cobalamin adenosyltransferase	Putative uncharacterized protein	Cobalamin adenosyltransferase	
ECOLI02385	Ethanolamine utilization protein eutQ	Putative ethanolamine utilization protein EutQ	Related to ethanolamine utilization protein	Ethanolamine utilization protein eutQ	Putative uncharacterized protein	Lin1151 protein	putative ethanolamine utilization protein	similar to Salmonella typhimurium putative ethanolamine utilization protein putative ethanolamine utilization protein	Ethanolamine utilization protein eutQ	Code: E; COG: COG4766 conserved hypothetical protein	Code: E; COG: COG4766 conserved hypothetical protein	Ethanolamine utilization protein EutQ	ethanolamine utilization protein EutQ identified by match to protein family HMM PF05899; match to protein family HMM PF06249	Ethanolamine utilization protein EutQ	Ethanolamine utilisation EutQ family protein PFAM: protein of unknown function DUF861, cupin_3; Ethanolamine utilisation EutQ family protein KEGG: ecp:ECP_2472 ethanolamine utilization protein EutQ	ethanolamine utilization protein EutQ	Putative uncharacterized protein	Ethanolamine utilisation EutQ family protein	Putative ethanolamine utilization protein	Putative regulator of ethanolamine utilization	Putative uncharacterized protein	Ethanolamine utilization protein EutQ	Ethanolamine utilisation EutQ family protein	Ethanolamine utilization protein EutQ-like protein	Conserved protein	Ethanolamine utilization protein EutQ homolog	Ethanolamine utilization protein EutQ	Ethanolamine utilisation EutQ family protein	Ethanolamine utilization protein EutQ	
ECOLI02386	Ethanolamine utilization protein eutP	Lmo1145 protein	Ethanolamine utilization protein eutP	Putative uncharacterized protein	Lin1109 protein	Residues 1 to 159 of 159 are 98 pct identical to residues 1 to 159 of a 159 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289013.1 orf, conserved hypothetical protein	IPR001687: ATP/GTP-binding site motif A (P-loop) putative ethanolamine utilization protein	similar to Salmonella typhimurium putative ethanolamine utilization protein putative ethanolamine utilization protein	Ethanolamine utilization protein eutP	Code: E; COG: COG4917 conserved hypothetical protein	Code: E; COG: COG4917 conserved hypothetical protein	Ethanolamine utilization protein EutP	hypothetical protein	Ethanolamine utilization protein EutP	putative ethanolamine utilization protein KEGG: spt:SPA0399 putative ethanolamine utilization protein	Ethanolamine utilization protein-like	conserved hypothetical protein Code: E; COG: COG4917	ethanolamine utilization protein EutP	propanediol utilization protein PduV	Putative ethanolamine utilization protein	Putative uncharacterized protein	Ethanolamine utilization protein, EutP	Conserved protein with nucleoside triphosphate hydrolase domain	Ethanolamine utilization protein, EutP	Ethanolamine utilization protein, EutP	Ethanolamine utilization protein, EutP	Ethanolamine utilization protein	Putative uncharacterized protein	Ethanolamine utilization protein eutP	
ECOLI02387	Ethanolamine utilization protein eutS	Ethanolamine utilization protein eutS	Ethanolamine utilization protein	Putative uncharacterized protein	Residues 1 to 135 of 135 are 99 pct identical to residues 1 to 135 of a 135 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289014.1 orf, conserved hypothetical protein	putative carboxysome structural protein, ethanol utilization	similar to Salmonella typhi CT18 putative ethanolamine utilization protein EutS putative ethanolamine utilization protein EutS	Ethanolamine utilization protein eutS	Code: E; COG: COG4810 conserved hypothetical protein	Code: E; COG: COG4810 conserved hypothetical protein	Code: E; COG: COG4810; orf conserved hypothetical protein	Ethanolamine utilization protein EutS	hypothetical protein	Ethanolamine utilization protein EutS	microcompartments protein PFAM: microcompartments protein KEGG: sfv:SFV_2506 hypothetical protein	putative propanediol utilization protein (PduU)	conserved hypothetical protein Code: E; COG: COG4810	ethanolamine utilization protein EutS	Microcompartments protein	Microcompartments protein	Putative carboxysome structural protein, ethanol utilization	Putative uncharacterized protein	Ethanolamine utilization protein EutS	Putative uncharacterized protein	Predicted carboxysome structural protein with predicted role in ethanol utilization	Ethanolamine utilization protein EutS	Microcompartments protein	Ethanolamine utilization protein EutS	Ethanolamine utilization protein	
ECOLI02388	NADP-dependent malic enzyme	Malate oxidoreductase	NADP-dependent malic enzyme	NADP-dependent malic enzyme	Mdh	NADP-dependent malate dehydrogenase	NADP-dependent malic enzyme	NADP-dependent malic enzyme	NADP-dependent malic enzyme	NADP-dependent malic enzyme	NADP-dependent malic enzyme	NADP-dependent malic enzyme	NADP-dependent malic enzyme	Putative multimodular enzyme	Residues 1 to 759 of 759 are 99 pct identical to residues 1 to 759 of a 759 aa protein from Escherichia coli O157:H7 ref: NP_311352.1 putative multimodular enzyme	NADP-dependent malic enzyme	Putative nadp-dependent malic enzyme oxidoreductase protein	NADP-dependent malic enzyme	identified by similarity to SP:O30807; match to protein family HMM PF00390; match to protein family HMM PF01515; match to protein family HMM PF03949 malate dehydrogenase	NADP-dependent malate dehydrogenase	Malate oxidoreductase	paral putative transferase	similar to Salmonella typhi CT18 NADP-dependent malate dehydrogenase (decarboxylating) NADP-dependent malate dehydrogenase (decarboxylating)	NADP-dependent malic enzyme	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative bifunctional protein (MaeB) [Includes: putative malic oxidoreductase (N-terminal); putative phosphotransacetylase (C-terminal)]	NADP-ME; Similar to: HI1245, MAO2_HAEIN NADP-dependent malic enzyme	Malic enzyme SfcA protein	NADP-dependent malic enzyme	NADP-dependent malic enzyme	
ECOLI02389	Transaldolase A	transaldolase;	Transaldolase A	Transaldolase A	Transaldolase 1	Transaldolase	PUTATIVE TRANSALDOLASE-LIKE PROTEIN	Transaldolase A	Transaldolase	Residues 1 to 316 of 316 are 98 pct identical to residues 1 to 316 of a 316 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289016.1 transaldolase A	IPR001585: Transaldolase transaldolase A	similar to Salmonella typhi CT18 transaldolase A transaldolase A	Transaldolase A	ortholog to Escherichia coli bnum: b2464; MultiFun: Metabolism 1.7.3 transaldolase A	Code: G; COG: COG0176 transaldolase A	transaldolase A	transaldolase AB	Transaldolase	Dihydrouridine synthase TIM-barrel protein nifR3	Transaldolase	transaldolase identified by match to protein family HMM PF00923; match to protein family HMM TIGR00874	predicted protein go_process: carbohydrate metabolism	transaldolase A Code: G; COG: COG0176	transaldolase A	Transaldolase	Lodderomyces elongisporus (LELG_03388.1) transaldolase (translation)	Transaldolase	Transaldolase	Putative uncharacterized protein	
ECOLI02390	Transketolase 2	TRANSKETOLASE;06_0120, TRANSKETOLASE, TKT1_yeast, gene found by Glimmer;	Transketolase	Transketolase 2	Transketolase 2	TRANSKETOLASE A TKTA	Transketolase A	Transketolase 2 isozyme	Transketolase	Residues 13 to 679 of 679 are 99 pct identical to residues 1 to 667 of a 667 aa protein from Escherichia coli K12 ref: NP_416960.1 transketolase 2 isozyme	Transketolase	transketolase	IPR005474: Transketolase, N terminal; IPR005475: Transketolase, central region transketolase 2, isozyme	similar to Salmonella typhi CT18 transketolase 2 transketolase 2	Transketolase	Transketolase 2 isozyme	Code: G; COG: COG0021 transketolase 2 isozyme	transketolase identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232	transketolase EC 2.2.1.1	transketolase	Transketolase 2	transketolase A	transketolase	Transketolase II	transketolase identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232	transketolase TIGRFAM: transketolase PFAM: Transketolase domain protein; Transketolase, central region KEGG: pol:Bpro_4827 transketolase	transketolase	Transketolase	Transketolase	
ECOLI02391	Uncharacterized protein ypfG	Hypothetical protein ypfG	similar to SP:P09063, PID:790518, SP:P09063, and PID:790518; identified by sequence similarity; putative conserved hypothetical protein	Putative uncharacterized protein BMEI0507	Putative uncharacterized protein	Residues 1 to 306 of 306 are 98 pct identical to residues 42 to 347 of a 347 aa protein from Escherichia coli K12 ref: NP_416961.1 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	similar to BR1505, identified by sequence similarity to conserved hypothetical protein conserved hypothetical protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ypfG	protein of unknown function DUF1176 PFAM: protein of unknown function DUF1176 KEGG: bur:Bcep18194_B2419 hypothetical protein	protein of unknown function DUF1176 PFAM: protein of unknown function DUF1176 KEGG: bcn:Bcen_4673 protein of unknown function DUF1176	conserved hypothetical protein; putative signal peptide Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein ypfG	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02392	GDP-mannose pyrophosphatase nudK	Putative uncharacterized protein	NTP pyrophosphohydrolase, MutT family	GDP-mannose pyrophosphatase nudK	ADP-ribose pyrophosphatase	Hypothetical protein yffH	GDP-mannose pyrophosphatase nudK	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Putative uncharacterized protein	ADP-ribose pyrophosphatase	GDP-mannose pyrophosphatase nudK	SCF85.08c, unknown, len: 233 aa. Weakly similar to many hypotheticals e.g. Haemophilus influenzae SW:YQIE_HAEIN (EMBL; U32723) hypothetical protein HI0398 (217 aa), fasta scores opt: 291 z-score: 349.5 E(): 4.1e-12 31.8% identity in 179 aa overlap. Contains a PS00017 ATP/GTP-binding site motif A (P-loop). conserved hypothetical protein SCF85.08c	Residues 1 to 191 of 191 are 98 pct identical to residues 1 to 191 of a 191 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289019.1 orf, conserved hypothetical protein	GDP-mannose pyrophosphatase nudK	Similar to ADP-ribose pyrophosphatase	ADP-ribose pyrophosphatase protein	InterProMatches:IPR004385 ADP-ribose pyrophosphatase	putative pyrophosphohydrolase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	conserved hypothetical protein	Putative	GDP-mannose pyrophosphatase nudK	Ortholog of S. aureus MRSA252 (BX571856) SAR1575 putative ADP-ribose pyrophosphatase	conserved hypothetical protein	ADP-ribose pyrophosphatase	GDP-mannose pyrophosphatase nudK	conserved hypothetical protein	Similar to Bacillus subtilis ADP-ribose pyrophosphatase NudF SW:ADPP_BACSU (P54570) (185 aa) fasta scores: E(): 5.4e-26, 48.851% id in 174 aa, and to Bacillus halodurans BH1524 TR:Q9KCP5 (EMBL:AP001512) (183 aa) fasta scores: E(): 3.1e-28, 52.907% id in 172 aa putative ADP-ribose pyrophosphatase	
ECOLI02393	Protein aegA	Putative oxidoreductase	AegA protein	Anaerobically expressed oxidoreductase	Putative oxidoreductase, Fe-S subunit	Residues 1 to 659 of 659 are 99 pct identical to residues 1 to 659 of a 659 aa protein from Escherichia coli K12 ref: NP_416963.1 putative oxidoreductase, Fe-S subunit	IPR000103: Pyridine nucleotide-disulphide oxidoreductase, class-II; IPR000205: NAD-binding site; IPR000345: Cytochrome c heme-binding site;IPR000531: TonB-dependent receptor protein;IPR000759: Adrenodoxin reductase;IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I;IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase;IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain putative oxidoreductase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	Putative oxidoreductase	Code: ER; COG: COG0493 putative oxidoreductase, Fe-S subunit	Code: ER; COG: COG0493 putative oxidoreductase, Fe-S subunit	Code: ER; COG: COG0493 putative oxidoreductase, Fe-S subunit	AegA protein	Putative oxidoreductase Fe-S subunit	putative oxidoreductase, Fe-S subunit Code: ER; COG: COG0493	putative oxidoreductase Fe-S subunit	glutamate synthase, small subunit	Glutamate synthase, small subunit	Putative oxidoreductase, Fe-S subunit	Putative uncharacterized protein	Protein aegA	Fused predicted oxidoreductase: FeS binding subunit; NAD/FAD-binding subunit	Protein aegA	Glutamate synthase, small subunit	Protein aegA	Putative uncharacterized protein	Putative uncharacterized protein	Putative oxidoreductase	Protein AegA	
ECOLI02394	Nitrate/nitrite sensor protein narQ	NarQ	Nitrate/nitrite sensor protein NarQ	Nitrate/nitrite sensor protein NarQ	hypothetical nitrate/nitrite sensor protein NarQ	Nitrate/nitrite sensor protein narQ	Nitrate/nitrite sensor protein NarQ	Nitrate/nitrite sensor protein NarQ	Nitrate/nitrite sensor protein	Nitrate/nitrite sensor protein NarQ	Sensor for nitrate reductase system, protein histidine kinase	Signal transduction histidine kinase, nitrate/nitrite-specific	nitrate/nitrite sensor protein NarQ	Similar to: HI0267, NARQ_HAEIN sensor protein NarQ	Sensory transduction histidine kinases BaeS protein	Sensory histidine kinase in two-component regulatory system with NarP	Nitrate/nitrite TWO-component sensor NARX	Code: T; COG: COG3850 sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL)	protein histidine kinase (acts on NarP and narL); Code: T; COG: COG3850 sensor for nitrate reductase system	protein histidine kinase (acts on NarP and narL); Code: T; COG: COG3850 sensor for nitrate reductase system	Nitrate/nitrite sensor protein NarQ	Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ precursor	Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ precursor	Nitrate/nitrite sensor protein NarQ	Nitrate/nitrite sensor protein	nitrate/nitrite sensor histidine kinase NarQ identified by similarity to SP:P27896; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF07730	signal transduction histidine kinase, nitrate/nitrite-specific, NarQ PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region KEGG: shm:Shewmr7_3364 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ	Two-component system nitrate/nitrite sensor histidine kinase NarQ	signal transduction histidine kinase, nitrate/nitrite-specific, NarQ PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region KEGG: son:SO3981 nitrate/nitrite sensor protein NarQ	
ECOLI02395	Probable aminoglycoside efflux pump	Probable aminoglycoside efflux pump	Probable aminoglycoside efflux pump	Sensitivity to acriflavine, integral membrane protein, possible efflux pump	Residues 1 to 1037 of 1037 are 99 pct identical to residues 1 to 1037 of a 1037 aa protein from Escherichia coli K12 ref: NP_416965.1 sensitivity to acriflavine, integral membrane protein, possible efflux pump	Multidrug efflux protein	IPR001036: Acriflavin resistance protein RND family, aminoglycoside/multidrug efflux pump	similar to Salmonella typhi CT18 putative efflux pump putative efflux pump	Multidrug efflux transporter	HAE1 family (RND superfamily) multidrug efflux protein	RND family aminoglycoside/multidrug efflux pump	sensitivity to acriflavine; integral membrane protein; possible efflux pump; Code: V; COG: COG0841 AcrD	sensitivity to acriflavine, integral membrane protein, possible efflux pump; Code: V; COG: COG0841 AcrD	RND superfamily protein	Probable aminoglycoside efflux pump	Multidrug efflux protein precursor	Probable aminoglycoside efflux pump	transporter, hydrophobe/amphiphile efflux-1 (HAE1) family TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family PFAM: acriflavin resistance protein KEGG: psp:PSPPH_2379 multidrug efflux transporter	Multidrug efflux protein precursor	Multidrug efflux protein precursor	Probable aminoglycoside efflux pump Code: V; COG: COG0841	Multidrug efflux protein precursor	aminoglycoside/multidrug efflux system	transporter, hydrophobe/amphiphile efflux-1 (HAE1) family TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family PFAM: acriflavin resistance protein KEGG: psb:Psyr_2865 hydrophobe/amphiphile efflux-1 HAE1	Multidrug efflux transporter, Hydrophobe/Amphiphile Efflux-1 (HAE1) family (2.A.6.2.) , RND superfamily	Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family	Aminoglycoside efflux pump	Putative uncharacterized protein	Acriflavine resistance protein D	
ECOLI02397	Protein yffB	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein HI0103	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Arsenate reductase	Putative uncharacterized protein	Putative uncharacterized protein STY2720	All0195 protein	Putative uncharacterized protein	hypothetical arsenate reductase	Protein yffB	similar to GP:15073235, and GP:15073235; identified by sequence similarity; putative conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	ArsC family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	ARSENATE REDUCTASE	Putative arsenate reductase	Putative uncharacterized protein yffB	
ECOLI02398	Succinyl-diaminopimelate desuccinylase	Acetyl-lysine deacetylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Acetyl-lysine deacetylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	DEHA2F07128p;similar to uniprot|O74916 Schizosaccharomyces pombe SPCC757 SPCC757.05c protein;	Predicted deacylase	NEQ511	Acetylornithine deacetylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Deacetylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	putative succinyl-diaminopimelate desuccinylase	Succinyl-diaminopimelate desuccinylase	identified by match to TIGR protein family HMM TIGR01246 succinyl-diaminopimelate desuccinylase	Acetylornithine deacetylase/succinyl- diaminopimelate desuccinylase family protein	Succinyl-diaminopimelate desuccinylase	
ECOLI02399	UPF0370 protein ypfN	UPF0370 protein ypfN	UPF0370 protein ECA1289	UPF0370 protein ypfN	Residues 9 to 74 of 74 are 100 pct identical to residues 1 to 66 of a 66 aa protein from Escherichia coli dbj: BAA16347.1 orf, conserved hypothetical protein	UPF0370 protein YPO3055/y1425/YP_2677	UPF0370 protein plu2724	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	UPF0370 protein YPTB2777	UPF0370 protein ypfN	putative inner membrane protein	putative inner membrane protein	conserved hypothetical protein	putative membrane protein	UPF0370 protein ypfN	Putative membrane protein	UPF0370 protein ypfN	Membrane protein	Putative membrane protein	putative inner membrane protein	Membrane protein	UPF0370 protein Ent638_2968	Putative cytochrome	Putative uncharacterized protein	UPF0370 protein ypfN	UPF0370 protein Spro_3503	Predicted protein	UPF0370 protein YpsIP31758_1253	
ECOLI02400	Esterase ypfH	Phospholipase/carboxylesterase family protein	Hypothetical protein ypfH	Uncharacterized hydrolase RT0729	Probable esterase	Putative phospholipase/Carboxylesterase family protein	Probable esterase	Putative uncharacterized protein ypfH	Uncharacterized hydrolase RP744	Residues 1 to 240 of 240 are 99 pct identical to residues 1 to 240 of a 240 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289026.1 orf, conserved hypothetical protein	identified by match to protein family HMM PF02230 phospholipase/carboxylesterase family protein	Phospholipase/Carboxylesterase	Predicted esterase	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative esterase	similarity to serine esterase	Serine esterase	Code: R; COG: COG0400 conserved hypothetical protein	pfam02230.8, abhydrolase_2 This family consists of both phospholipases and carboxylesterases with broad substrate specificity, and is structurally related to alpha/beta hydrolases pfam00561. Phospholipase/Carboxylesterase	Code: R; COG: COG0400 conserved hypothetical protein	phospholipase/Carboxylesterase	probable esterase	Serine esterase	Phospholipase/Carboxylesterase	phospholipase/Carboxylesterase PFAM: phospholipase/Carboxylesterase: (4.4e-35) KEGG: sil:SPO2126 phospholipase/carboxylesterase family protein, ev=1e-105, 85% identity	Putative uncharacterized protein	Phospholipase/Carboxylesterase	Carboxylesterase	phospholipase/carboxylesterase family protein identified by match to protein family HMM PF02230	Putative uncharacterized protein ypfH	
ECOLI02401	Uncharacterized protein ypfI	Hypothetical protein	Putative uncharacterized protein	Small heat shock protein	Putative uncharacterized protein	Predicted acetyltransferase	Putative uncharacterized protein	conserved hypothetical protein	Hypothetical protein ypfI	unknown	Putative uncharacterized protein VCA1112	Putative acetyltransferase	Putative uncharacterized protein VPA1750	Putative uncharacterized protein ypfI	Predicted P-loop ATPase fused to an acetyltransferase	Residues 1 to 671 of 671 are 97 pct identical to residues 1 to 671 of a 671 aa protein from Escherichia coli O157:H7 ref: NP_311363.1 orf, conserved hypothetical protein	Putative acetyltransferase	predicted ATPase, DUF699 family, fused to acetyltransferase domain	Complete genome; segment 10/17	putative acetyltransferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative acetyltransferase	Similar to: HI1254, YC54_HAEIN predicted P-loop ATPase fused to an acetyltransferase	Predicted P-loop ATPase fused to an acetyltransferase Hypothetical protein	Predicted P-loop ATPase fused to an acetyltransferase	Putative acetyltransferase	conserved hypothetical protein	Hypothetical ATPase	conserved hypothetical protein	
ECOLI02402	Uncharacterized protein ypfJ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Predicted metalloprotease	Hypothetical protein ypfJ	similar to GP:15074511, and GP:15074511; identified by sequence similarity; putative conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	PMID: 10984043 best DB hits: BLAST: pir:G83056; conserved hypothetical protein PA4717 [imported] -; E=1e-59 pir:B65023; hypothetical protein b2475 - Escherichia coli (strain; E=4e-59 gb:AAK04057.1; (AE006233) unknown [Pasteurella multocida]; E=8e-57 COG: PA4717; COG2321 Predicted metalloprotease; E=1e-60 predicted metalloprotease	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Zinc metallopeptidase, putative	Putative membrane protein	Putative metalloprotease	Putative uncharacterized protein	ZINC PROTEASE	Putative membrane protein	Uncharacterized protein ypfJ	similar to AE007099-6|AAK46964.1| percent identity: 46 in 283 aa conserved hypothetical protein	hypothetical protein	Putative uncharacterized protein	Residues 1 to 287 of 287 are 99 pct identical to residues 1 to 287 of a 287 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289028.1 orf, conserved hypothetical protein	Putative membrane protein	Probable predicted metalloprotease transmembrane protein	Neutral zinc metallopeptidase family	identified by match to protein family HMM PF04228 zinc metallopeptidase, putative	
ECOLI02403	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	hypothetical phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylamidoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase 1	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase	
ECOLI02404	Lipoprotein 34	Lipoprotein-34 NlpB	Putative lipoprotein	hypothetical lipoprotein-34 NlpB	Lipoprotein-34	Lipoprotein-34 NlpB	Lipoprotein-34 NlpB	Lipoprotein	Lipoprotein-34 NlpB	Lipoprotein-34	Lipoprotein-34 NlpB	Residues 1 to 345 of 345 are 99 pct identical to residues 1 to 345 of a 345 aa protein from Escherichia coli K12 ref: NP_416972.1 lipoprotein-34	Lipoprotein	Lipoprotein-34	IPR001360: Glycoside hydrolase, family 1 lipoprotein-34	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Lipoprotein	lipoprotein-34 precursor	Uncharacterized lipoprotein NlpB protein	Lipoprotein-34	Code: M; COG: COG3317 lipoprotein-34	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative lipoprotein-34 NlpB	Code: M; COG: COG3317 lipoprotein-34	lipoprotein	Code: M; COG: COG3317 lipoprotein-34	Lipoprotein-34	NlpBDapX lipoprotein precursor	NlpBDapX family lipoprotein precursor	Lipoprotein	
ECOLI02404	Lipoprotein 34	Lipoprotein-34 NlpB	Putative lipoprotein	hypothetical lipoprotein-34 NlpB	Lipoprotein-34	Lipoprotein-34 NlpB	Lipoprotein-34 NlpB	Lipoprotein	Lipoprotein-34 NlpB	Lipoprotein-34	Lipoprotein-34 NlpB	Residues 1 to 345 of 345 are 99 pct identical to residues 1 to 345 of a 345 aa protein from Escherichia coli K12 ref: NP_416972.1 lipoprotein-34	Lipoprotein	Lipoprotein-34	IPR001360: Glycoside hydrolase, family 1 lipoprotein-34	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Lipoprotein	lipoprotein-34 precursor	Uncharacterized lipoprotein NlpB protein	Lipoprotein-34	Code: M; COG: COG3317 lipoprotein-34	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative lipoprotein-34 NlpB	Code: M; COG: COG3317 lipoprotein-34	lipoprotein	Code: M; COG: COG3317 lipoprotein-34	Lipoprotein-34	NlpBDapX lipoprotein precursor	NlpBDapX family lipoprotein precursor	Lipoprotein	
ECOLI02405	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	
ECOLI02406	Glycine cleavage system transcriptional repressor	Transcriptional regulator	Glycine cleavage system transcriptional repressor	Putative uncharacterized protein	Glycine cleavage system regulatory protein	Glycine cleavage system transcriptional repressor	hypothetical glycine cleavage system transcriptional repressor	Glycine cleavage system transcriptional repressor	Glycine cleavage system transcriptional repressor, putative	Glycine cleavage system transcriptional repressor	Putative uncharacterized protein	Putative glycine cleavage system transcriptional repressor	Transcriptional regulation of gcv operon	Glycine cleavage system transcriptional repressor, putative	Residues 1 to 190 of 190 are 100 pct identical to residues 23 to 212 of a 212 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289032.1 transcriptional regulation of gcv operon	Glycine cleavage system transcriptional repressor	Glycine cleavage system transcriptional repressor	Transcriptional regulator	transcriptional repressor of gcv operon	similar to Salmonella typhi CT18 glycine cleavage system transcriptional repressor glycine cleavage system transcriptional repressor	Glycine cleavage system transcriptional repressor	Glycine cleavage system transcriptional repressor	Putative glycine cleavage system transcriptional repressor	glycine cleavage system transcriptional repressor	Glycine cleavage system transcriptional repressor, putative	Transcriptional repressor of gcv operon	glycine cleavage system transcriptional repressor	identified by similarity to SP:P23483 glycine cleavage system transcriptional repressor	conserved hypothetical protein	
ECOLI02407	Putative peroxiredoxin bcp	AhpC/TSA family protein	Bacterioferritin comigratory protein Bcp	Bacterioferritin comigratory protein	Putative peroxiredoxin bcp	Putative bacterioferritin co-migratory protein	Bacterioferritin comigratory protein, thiol peroxidase, putative	Putative bacterioferritin comigratory protein	Possible thioredoxin-dependent thiol peroxidase	Bacterioferritin comigratory protein	Putative bacterioferritin comigratory (BCP) protein	hypothetical bacterioferritin comigratory protein	Hypothetical alkyl hydroperoxide reductase	Putative bacterioferritin comigratory (BCP) protein	Probable bacterioferritin comigratory protein	Bacterioferritin comigratory protein	Bcp	Bacterioferritin comigratory protein homolog	Bacterioferritin comigratory protein	Bacterioferritin comigratory protein	Bacterioferritin comigratory protein	Bacterioferritin comigratory protein	Peroxiredoxin	Putative antioxidant protein	Putative bacterioferritin co-migratory protein	Thioredoxin-dependent thiol peroxidase	Bacterioferritin comigratory protein	Bacterioferritin comigratory protein	Putative bacterioferritin comigratory protein	
ECOLI02408	Hydrogenase-4 component A	Conserved archaeal protein	Hydrogenase 4 Fe-S subunit	Residues 1 to 204 of 205 are 98 pct identical to residues 14 to 217 of a 218 aa protein from Escherichia coli K12 ref: NP_416976.1 hydrogenase-4 Fe-S subunit	Oxidoreductase iron-sulfur protein	Code: C; COG: COG1142 hydrogenase 4 Fe-S subunit	Code: C; COG: COG1142 hydrogenase 4 Fe-S subunit	Fe-S-cluster-containing hydrogenase components 1	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: mac:MA2963 iron-sulfur cluster binding protein	hydrogenase-4 component A identified by match to protein family HMM PF00037	Hydrogenase 4 Fe-S subunit	electron transport protein Also similar to CD3313 (42.94 38d).	hydrogenase 4 Fe-S subunit Code: C; COG: COG1142	4Fe-4S ferredoxin iron-sulfur binding domain protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein	Iron-sulfur cluster-binding protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein	Hydrogenase 4, 4Fe-4S subunit	Electron transport protein HydN	Hydrogenase-4 component A	4Fe-4S ferredoxin iron-sulfur binding domain protein	Hydrogenase-4 component A	4Fe-4S ferredoxin iron-sulfur binding domain protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein	Hydrogenase-4 component A	Hydrogenase-4 component A	Hydrogenase 4 Fe-S subunit	Hydrogenase 4, 4Fe-4S subunit	Hydrogenase 4, 4Fe-4S subunit	
ECOLI02409	Hydrogenase-4 component B	NAD-dependent dehydrogenase subunit	F420H2:quinone oxidoreductase, 53.9 kDa subunit	Putative uncharacterized protein PH1431	Probable hydrogenase, component B-formate hydrogenlyase subunit 3	Hydrogenase-4 component B	Hydrogenase 4 membrane subunit	CDS_ID OB3106; ubiquinone NADH dehydrogenase	Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit	membrane bound hydrogenase, MbhH subunit	Hydrogenase subunit	Putative formate hydrogenlyase	NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	identified by similarity to SP:P23482 hydrogenase, HycC subunit, putative	Code: CP; COG: COG0651 hydrogenase 4 membrane subunit	hydrogenase, HycC subunit	NADH dehydrogenase (quinone)	Code: CP; COG: COG0651 hydrogenase 4 membrane subunit	putative hydrogenase-4 component B similarity:fasta; SWALL:HYFB_ECOLI (SWALL:P23482); Escherichia coli; hydrogenase-4 component b; hyfB; length 672 aa; 675 aa overlap; query 14-671 aa; subject 24-672 aa similarity:fasta; SWALL:Q89GK6 (EMBL:AP005958); Bradyrhizobium japonicum; HyfB protein; hyfB; length 670 aa; 673 aa overlap; query 1-673 aa; subject 1-670 aa	NADH dehydrogenase (quinone)	hydrogenase-4 component B similarity to COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit(Evalue: 1E-101)	NADH dehydrogenase (quinone)	NADH dehydrogenase (quinone)	NADH/Ubiquinone/plastoquinone (complex I)	NADH dehydrogenase (quinone)	NADH dehydrogenase (quinone)	Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit	hydrogenase 4 membrane subunit identified by match to protein family HMM PF00361	NADH dehydrogenase subunit n identified by match to protein family HMM PF00361	
ECOLI02410	Hydrogenase-4 component C	Formate hydrogenlyase subunit 4	Related to hydrogenase, component C-formate hydrogenlyase subunit 4	Hydrogenase-4 component C	Hydrogenase 4 membrane subunit	Residues 1 to 315 of 315 are 99 pct identical to residues 1 to 315 of a 315 aa protein HYFC_ECOLI sp: P77858 hydrogenase-4 component C	membrane bound hydrogenase, MbhM subunit	Code: C; COG: COG0650 hydrogenase 4 membrane subunit	Code: C; COG: COG0650 hydrogenase 4 membrane subunit	Code: C; COG: COG0650 hydrogenase 4 membrane subunit	Formate hydrogenlyase subunit 4	hydrogenase-4 component C identified by match to protein family HMM PF00146	membrane bound hydrogenase, MbxM subunit KEGG: tko:TK1218 membrane bound hydrogenase, MbxM subunit	hydrogenase-4 component C identified by match to protein family HMM PF00146	Hydrogenase-4 component C	Hydrogenase-4 component C	hydrogenase 4 membrane subunit Code: C; COG: COG0650	Ni-Fe hydrogenase, membrane subunit HycD/HyfD	Ni-Fe hydrogenase, membrane subunit HycD/HyfD	Hydrogenase, component C-formate hydrogenlyase subunit 4-like protein	Formate hydrogenlyase subunit	Hydrogenase-4 component C	Formate hydrogenlyase subunit 4-like protein	Hydrogenase 4, membrane subunit	Hydrogenase-4 component C	Hydrogenase-4 component C	Formate hydrogenase, subunit C	Hydrogenase-4 subunit D	Hydrogenase-4 component C	
ECOLI02411	Hydrogenase-4 component D	NADH ubiquinone oxidoreductase	Hydrogenase-4 component D	PMID: 3035337 best DB hits: BLAST: gb:AAG09461.1; AF217811_11 (AF217811) NADH subunit 5 [Tupaia; E=3e-29 swissprot:P50368; NU5M_SCHCO NADH-UBIQUINONE OXIDOREDUCTASE CHAIN; E=4e-29 embl:CAA50887.1; (X72004) NADH-ubiquinone oxidoreductase subunit; E=1e-28 COG: slr0844; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=3e-29 PAB1402; COG0651 Formate hydrogenlyase subunit 3; E=4e-17 sll1732; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=1e-16 PFAM: PF00662; NADH-Ubiquinone oxidoreductase; E=0.41 PF00361; NADH-Ubiquinone/plastoquinone (; E=1.2e-36 NADH subunit 5	Hydrogenase 4 membrane subunit	NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Residues 1 to 479 of 479 are 99 pct identical to residues 1 to 479 of a 479 aa protein from Escherichia coli K12 ref: NP_416979.1 hydrogenase-4 membrane subunit	Similar to NADH-ubiquinone oxidoreductase chain 5 hypothetical protein	conserved gene NADH dehydrogenase subunit 5	Similar to NADH-ubiquinone oxidoreductase chain 5 hypothetical protein	identified by similarity to SP:P50939; match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974 NADH dehydrogenase I, L subunit	NADH ubiquinone oxidoreductase	Proton-translocating NADH-quinone oxidoreductase, chain M	pH adaptation potassium efflux system protein D 1; sodium/hydrogen antiporter subunit	Code: CP; COG: COG1009 hydrogenase 4 membrane subunit	NADH dehydrogenase (quinone)	Proton-translocating NADH-quinone oxidoreductase, chain L	NADH dehydrogenase	NADH dehydrogenase (quinone)	NADH dehydrogenase (quinone)	NADH dehydrogenase (Quinone) precursor	NAD(P)H dehydrogenase, subunit NdhF3 family protein	NADH dehydrogenase (quinone)	NADH/Ubiquinone/plastoquinone (complex I)	NADH dehydrogenase (quinone) PFAM: NADH/Ubiquinone/plastoquinone (complex I) KEGG: vch:VC1581 NADH dehydrogenase, putative	NADH dehydrogenase (quinone)	Hydrogenase-4 component D	NADH/Ubiquinone/plastoquinone (Complex I) precursor	NADH dehydrogenase (Quinone) precursor	
ECOLI02412	Hydrogenase-4 component E	Putative uncharacterized protein	Hydrogenase-4 component E	PUTATIVE HYDROGENASE-4 COMPONENT E	Hydrogenase-4 component E	Hydrogenase 4 membrane subunit	Residues 1 to 216 of 216 are 100 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289038.1 hydrogenase-4 membrane subunit	Code: C; COG: COG4237 hydrogenase 4 membrane subunit	Code: C; COG: COG4237 hydrogenase 4 membrane subunit	NADH-ubiquinone oxidoreductase, chain 4L	Code: C; COG: COG4237 hydrogenase 4 membrane subunit	NADH-ubiquinone oxidoreductase, chain 4L	conserved hypothetical protein	conserved hypothetical protein	NADH-ubiquinone oxidoreductase, chain 4l identified by match to protein family HMM PF00420	hydrogenase subunit KEGG: mca:MCA1140 hydrogenase subunit	NAD-dependent dehydrogenase subunit KEGG: gme:Gmet_2599 NAD-dependent dehydrogenase subunit	NADH-ubiquinone oxidoreductase, chain 4L	Hydrogenase-4 component E	hydrogenase HycP membrane protein involved in hydrogen metabolism.	NADH-ubiquinone oxidoreductase, chain 4L	NAD-dependent dehydrogenase subunit	hydrogenase 4 membrane subunit Code: C; COG: COG4237	Ni-Fe hydrogenase, membrane subunit HyfE	Hydrogenase 4 membrane component (E)-like protein	Hydrogenase 4, membrane subunit	NAD-dependent dehydrogenase subunit	Hydrogenase-4 component E precursor	Hydrogenase-4 component E	
ECOLI02413	Hydrogenase-4 component F	NAD-dependent dehydrogenase subunit	NADH-Ubiquinone/plastoquinone related	Hydrogenase-3 subunit	Formate hydrogenlyase subunit 4	HYDROGENASE 4 MEMBRANE SUBUNIT	Hydrogenase 4 membrane subunit	Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit	Residues 1 to 528 of 528 are 98 pct identical to residues 1 to 526 of a 526 aa protein from Escherichia coli O157:H7 ref: NP_311375.1 hydrogenase-4 membrane subunit	involved in low CO2-inducible high affinity CO2 uptake NADH dehydrogenase subunit 5	NADH-ubiquinone oxidoreductase, putative	Mb0089, hycQ, len: 488 aa. Equivalent to Rv0086, len: 488 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 488 aa overlap). Possible hycQ, hydrogenase (EC 1.-.-.-), integral membrane protein, weakly similar to P77437|HYFF_ECOLI HYDROGENASE-4 COMPONENT F from Escherichia coli (526 aa), FASTA scores: opt: 948, E(): 0, (35.9% identity in 493 aa overlap); and AAK06855.1|AF335723_1|AF335723 hydrogenase-4 component B from Burkholderia pseudomallei (668 aa). Also similar to d9087711 & NUOL_ECOLI|P33607 NADH dehydrogenase I chain L from Escherichia coli (613 aa), FASTA scores: opt: 360, E():3.2e-13, (27.9% identity in 488 aa overlap); and to NUON_ECOLI|P33608 NADH dehydrogenase I chain N from Escherichia coli (425 aa), FASTA scores: opt: 375, E(): 3.9e-14, (25.0% identity in 432 aa overlap). POSSIBLE HYDROGENASE HYCQ	NADH:ubiquinone oxidoreductase subunit 5 (chain L) related protein	Code: CP; COG: COG0651 hydrogenase 4 membrane subunit	Code: CP; COG: COG0651 hydrogenase 4 membrane subunit	NADH/Ubiquinone/plastoquinone (complex I)	NADH dehydrogenase (quinone)	Code: CP; COG: COG0651 hydrogenase 4 membrane subunit	NADH dehydrogenase (quinone)	hydrogenase-4 component F similarity to COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit(Evalue: 1E-94)	Formate hydrogenase, subunit inner membrane protein	Formate hydrogenase, subunit inner membrane protein	hydrogenase-4 component F identified by match to protein family HMM PF00361	hydrogenase-4, F subunit, putative identified by match to protein family HMM PF00361	NADH dehydrogenase	NADH dehydrogenase (quinone) PFAM: NADH/Ubiquinone/plastoquinone (complex I) KEGG: eca:ECA1242 NADH dehydrogenase subunit N	NADH dehydrogenase (quinone) PFAM: NADH/Ubiquinone/plastoquinone (complex I) KEGG: gsu:GSU0742 NAD-dependent dehydrogenase subunit	NADH dehydrogenase (quinone) PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I) KEGG: nha:Nham_4321 NADH/ubiquinone/plastoquinone (complex I)	NADH dehydrogenase (quinone)	
ECOLI02414	Hydrogenase-4 component G	Energy conserving hydrogenase B large subunit	Hydrogenase-4 component G	Hydrogenase 4 subunit	Residues 1 to 403 of 447 are 99 pct identical to residues 1 to 403 of a 570 aa protein from Escherichia coli dbj: BAA16375.1 formate hydrogenlyase subunit 5 precursor (FHL subunit 5) (hydrogenase 3, subunit 5).	Code: C; COG: COG3261 hydrogenase 4 subunit	Code: C; COG: COG3261 hydrogenase 4 subunit	NADH dehydrogenase (ubiquinone), 30 kDa subunit	Code: C; COG: COG3261 hydrogenase 4 subunit	Putative formate hydrogenlyase subunit	Hydrogenase-4 component G	Hypothetical protein	Energy-converting hydrogenase B, subunit N, EhbN	NADH-ubiquinone oxidoreductase chain 49kDa	NADH dehydrogenase	NADH dehydrogenase	Hydrogenase-4, G subunit	NADH-ubiquinone oxidoreductase, chain 49kDa	Hydrogenase 4, subunit	Hydrogenase-4, G subunit	NADH dehydrogenase (Ubiquinone) 30 kDa subunit	Hydrogenase-4, G subunit	NADH-ubiquinone oxidoreductase chain 49kDa	Hydrogenase-4, G subunit	Hydrogenase-4 component G	Hydrogenase-4, G subunit	Hydrogenase 4 membrane subunit	Hydrogenase 4, subunit	Hydrogenase 4, subunit	
ECOLI02415	Hydrogenase-4 component H	NADH-quinone oxidoreductase subunit I	Ech hydrogenase, subunit EchF, putative	Hydrogenase-4 component H	NADH-quinone oxidoreductase subunit I 1	Hydrogenase 4 Fe-S subunit	Residues 1 to 181 of 181 are 97 pct identical to residues 1 to 181 of a 181 aa protein from Escherichia coli K12 ref: NP_416983.1 hydrogenase-4 Fe-S subunit	4Fe-4S cluster-binding protein	NADH-ubiquinone oxidoreductase chain I protein	Code: C; COG: COG1143 hydrogenase 4 Fe-S subunit	Code: C; COG: COG1143 hydrogenase 4 Fe-S subunit	4Fe-4S ferredoxin, iron-sulfur binding	4Fe-4S ferredoxin, iron-sulfur binding	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: pho:PH1440 136aa long hypothetical protein	hydrogenase 4 Fe-S subunit Code: C; COG: COG1143	4Fe-4S ferredoxin, iron-sulfur binding domain protein	Iron-sulfur cluster-binding protein	Hydrogenase 4, Fe-S subunit	Iron-sulfur cluster-binding protein	4Fe-4S ferredoxin iron-sulfur binding domain protein	Iron-sulfur cluster-binding protein	Iron-sulfur cluster-binding protein	Iron-sulfur cluster-binding protein	Hydrogenase 4 Fe-S subunit	Hydrogenase 4, Fe-S subunit	Hydrogenase 4, Fe-S subunit	Hydrogenase 4, Fe-S subunit	Hydrogenase 4, Fe-S subunit	HyfH protein	
ECOLI02416	Hydrogenase-4 component I	Hydrogenase 4 Fe-S subunit	Ni,Fe-hydrogenase III small subunit	Residues 1 to 252 of 252 are 99 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli K12 ref: NP_416984.1 hydrogenase-4 Fe-S subunit	Code: C; COG: COG3260 hydrogenase 4 Fe-S subunit	Code: C; COG: COG3260 hydrogenase 4 Fe-S subunit	NADH ubiquinone oxidoreductase, 20 kDa subunit	Code: C; COG: COG3260 hydrogenase 4 Fe-S subunit	hydrogenase 4 Fe-S subunit Code: C; COG: COG3260	Hydrogenase-4, I subunit	NADH-quinone oxidoreductase, B subunit	Hydrogenase 4, Fe-S subunit	Hydrogenase-4, I subunit	NADH ubiquinone oxidoreductase 20 kDa subunit	Hydrogenase-4, I subunit	Hydrogenase-4, I subunit	Hydrogenase-4 component I	Hydrogenase-4, I subunit	Hydrogenase 4 Fe-S subunit	Hydrogenase 4, Fe-S subunit	Hydrogenase 4, Fe-S subunit	Hydrogenase 4, Fe-S subunit	Hydrogenase 4, Fe-S subunit	HyfI protein	Hydrogenase 4, Fe-S subunit	Hydrogenase 4, Fe-S subunit	NADH ubiquinone oxidoreductase 20 kDa subunit	Hydrogenase 4, Fe-S subunit	
ECOLI02417	Hydrogenase-4 component J	Putative uncharacterized protein	Residues 1 to 137 of 137 are 99 pct identical to residues 22 to 158 of a 158 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289043.1 putative protein processing element	putative protein processing element	putative protein processing element	putative protein processing element	putative protein processing element	Formate hydrogenlyase maturation protein HycH	Predicted processing element hydrogenase 4	Formate hydrogenlyase maturation protein HycH	Formate hydrogenlyase maturation HycH	Formate hydrogenlyase maturation protein HycH	Formate hydrogenlyase maturation protein HycH	Formate hydrogenlyase maturation protein HycH	Putative uncharacterized protein	Putative processing element hydrogenase 4	Putative processing element hydrogenase 4	Putative processing element hydrogenase 4	Putative processing element hydrogenase 4	HyfJ protein	Predicted processing element hydrogenase 4	Predicted processing element hydrogenase 4	predicted processing element hydrogenase 4	Formate hydrogenlyase maturation HycH	
ECOLI02418	Hydrogenase-4 transcriptional activator	Residues 2 to 610 of 610 are 98 pct identical to residues 1 to 609 of a 679 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289044.1 putative 2-component regulator, interaction with sigma 54	Code: KT; COG: COG3604 putative 2-component regulator, interaction with sigma 54	Transcriptional Regulator, NifA subfamily, Fis Family	putative 2-component regulator, interaction with sigma 54 Code: KT; COG: COG3604	Formate hydrogenlyase transcriptional activator	DNA-binding transcriptional activator, formate sensing	Formate hydrogenlyase transcriptional activator	Transcriptional regulator, NifA subfamily, Fis Family	Hydrogenase-4 transcriptional regulator	Putative formate hydrogenlyase transcriptional activator	Formate hydrogenlyase transcriptional activator	Putative two-component response regulator	DNA-binding transcriptional activator, formate sensing	DNA-binding transcriptional activator, formate sensing	DNA-binding transcriptional activator, formate sensing	HyfR protein	DNA-binding transcriptional activator, formate sensing	DNA-binding transcriptional activator, formate sensing	DNA-binding transcriptional activator HyfR, formate sensing	Transcriptional regulator, NifA subfamily, Fis Family	
ECOLI02419	Probable formate transporter 2	Bll2801 protein	Lmo0912 protein	Putative formate transporter	Putative formate dehydrogenase	Probable formate transporter	Formate/nitrate transporter	Formate/nitrate transporter	Formate/nitrite family of transporters	Lin0912 protein	similar to Escherichia coli K12 probable formate transporter (formate channel 2) gi: 1788837 (283 aa).  BLAST with identity of 98% in 291 aa. This CDS ontains frameshift. The sequence has been checked and is believed to be correct. pseudo	probable formate transporter	Formate transporter	putative formate-nitrite transporter; Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) Formate/nitrite transporter	Transporter	Formate transporter	identified by similarity to SP:P21501; match to protein family HMM PF01226; match to protein family HMM TIGR00790 formate/nitrite transporter family protein	Hypothetical formate transporter	identified by match to protein family HMM PF01226; match to protein family HMM TIGR00790 Formate transporter	formate transporter	formate/nitrite transporter	putativel formate transporter	Formate/nitrite transporter	Formate transporter	Formate/nitrite transporter	Formate transporter	formate channel 2; Code: P; COG: COG2116 probable formate transporter	Formate/nitrite transporter	Formate/nitrite transporter	
ECOLI02420	Putative permease perM	Putative uncharacterized protein	UPF0118 membrane protein TM_1187	Putative membrane protein	Putative permease perM	Permease PerM, putative	Permease PerM, putative	Putative permease perM	Residues 1 to 353 of 353 are 99 pct identical to residues 1 to 353 of a 353 aa protein from Escherichia coli O157:H7 ref: NP_311382.1 putative permease	Putative membrane protein	Putative permease perM	putative PerM family permease	Putative permease protein	transporter	Predicted permease PerM protein	Permease PerM, putative	Putative PerM family permease	identified by similarity to SP:P77406; match to protein family HMM PF01594 putative permease	Code: R; COG: COG0628 putative permease	Code: R; COG: COG0628 putative permease	Code: R; COG: COG0628 putative permease	Putative permease PerM	Hypothetical protein precursor	Putative membrane protein precursor	succinyl-diaminopimelate desuccinylase	Hypothetical protein	Putative permease PerM	Permease	Membrane protein precursor	
ECOLI02421	TPR repeat-containing protein yfgC	Putative uncharacterized protein	Putative uncharacterized protein	Putative Zn-dependent protease	TPR repeat-containing protein yfgC	Putative exported protein	Peptidase, M48 family	hypothetical Zn-dependent protease	Hypothetical protein yfgC	similar to GP:14021229; identified by sequence similarity; putative conserved hypothetical protein	TPR domain protein	TPR repeat-containing protein VC_2164	Putative exported protein	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	ZINC METALLOPROTEASE	Putative uncharacterized protein VP2278	TPR repeat-containing protein yfgC	hypothetical protein	Putative uncharacterized protein	Putative Zn-dependent protease	Residues 1 to 487 of 487 are 100 pct identical to residues 1 to 487 of a 487 aa protein from Escherichia coli K12 ref: NP_416989.1 orf, conserved hypothetical protein	TPR repeat-containing protein YPO3069/y1412/YP_2691	Peptidase family M48	Probable zinc metallopeptidase signal peptide protein	
ECOLI02422	Uncharacterized protein yfgD	Putative arsenate reductase	Putative arsenate reductase	Putative uncharacterized protein	Probable arsenate reductase	Arsenate reductase	Putative uncharacterized protein	Putative arsenate reductase	Arsenate reductase and related proteins, glutaredoxin family	Putative arsenate reductase	Putative arsenate reductase ArsC	Probable arsenate reductase	Protein yfgD	Arsenate reductase	Arsenate reductase, putative	Putative arsenate reductase	PMID: 8674982 best DB hits: BLAST: pir:C81247; arsenate reductase NMB0005 [imported] - Neisseria; E=8e-26 gb:AAG57605.1; AE005479_3 (AE005479) putative oxidoreductase; E=6e-25 swissprot:P76569; YFGD_ECOLI PROTEIN YFGD ----- pir: F65025; E=6e-25 COG: NMB0005; COG1393 Arsenate reductase and related proteins,; E=8e-27 yfgD; COG1393 Arsenate reductase and related proteins, glutaredoxin; E=7e-26 VC2165; COG1393 Arsenate reductase and related proteins,; E=3e-25 arsenate reductase	Arsenate reductase	Putative ArsC family reductase	Arsenate reductase	Arsenate reductase	Putative oxidoreductase	CDS_ID OB3152 hypothetical protein	SCO2206; SC3H12.14, arsC, arsenate reductase (partial CDS), len: >47 aa; identical to N-terminal region of previously sequenced TR:Q9X954 (EMBL:Y13833) Streptomyces coelicolor arsenate reductase (fragment) ArsC, 117 aa and to SW:YGL1_STRVR (EMBL:X52842) Streptomyces viridochromogenes hypothetical 13.4 kD protein in GlnII region (ORF1), 119 aa SC10B7.01, arsC, arsenate reductase (fragment), len: >117 aa; identical to previously sequenced TR:Q9X954 (EMBL:Y13833) Streptomyces coelicolor aresenate reductase (fragment), 117 aa, highly similar to SW:YGL1_STRVR (EMBL:X52842) Streptomyces viridochromogenes hypothetical 13.4 kD protein in GlnII region (ORF1), 119 aa; fasta scores: opt: 695 z-score: 873.2 E(): 0; 86.3% identity in 117 aa overlap and similar to SW:ARSC_ECOLI (EMBL:U00039;) Escherichia coli arsenate reductase (arsenical pump modifier) ArsC, 141 aa; fasta scores: opt: 202 z-score: 264.7 E(): 2.3e-07; 32.2% identity in 115 aa overlap	Putative arsenate reductase	Arsenate reductase	Residues 1 to 119 of 119 are 99 pct identical to residues 1 to 119 of a 119 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289048.1 putative oxidoreductase	Putative arsenate reductase	Putative arsenate reductase	
ECOLI02423	DnaA-homolog protein hda	Replication related protein	Replication related protein	Uncharacterized protein HI1225.1	DnaA-related protein	Putative uncharacterized protein	Putative uncharacterized protein	DnaA-homolog protein hda	Putative uncharacterized protein	DnaA-homolog protein hda	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	DnaA-homolog protein hda	DnaA family protein	Putative uncharacterized protein	Putative uncharacterized protein	DnaA-homolog protein hda	DnaA-related protein	Residues 1 to 248 of 248 are 99 pct identical to residues 1 to 248 of a 248 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289049.1 putative DNA replication factor	DnaA-homolog protein hda	Putative uncharacterized protein	Putative cog0593, atpase involved in dna replication initiation protein	DnaA-homolog protein hda	Similar to DnaA, ATPase involved in DNA replication initiation hypothetical protein	conserved gene DnaA-like family protein	Similar to DnaA, ATPase involved in DNA replication initiation hypothetical protein	identified by similarity to GB:BAC49388.1 conserved hypothetical protein	Putative uncharacterized protein	
ECOLI02424	Uracil permease	Probable uracil permease	Uracil permease	Uracil permease	Uracil permease	Uracil permease	PyrP protein	Uracil permease	Uracil permease	Uracil permease	Uracil permease	identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801 uracil permease	Uracil permease	Uracil permease	uracil transporter	Putative uracil permease	Putative uracil permease	Uracil permease	CDS_ID OB2293 uracil permease	Uracil permease	Uracil permease	Uracil permease UraA/PyrP	Uracil transporter	Xanthine/uracil permease	PyrP protein	Residues 15 to 443 of 443 are 99 pct identical to residues 1 to 429 of a 429 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289050.1 uracil transport	Uracil permease	Uracil transport protein	identified by similarity to EGAD:18534; match to protein family HMM PF00860; match to protein family HMM TIGR00801 uracil permease	
ECOLI02425	Uracil phosphoribosyltransferase	highly similar to sp|P18562 Saccharomyces cerevisiae YHR128w FUR1 uracil phosphoribosyltransferase, start by similarity	Probable uracil phosphoribosyltransferase 1 [Source:GeneDB_Spombe;Acc:SPAC1B3.01c]	highly similar to sp|P18562 Saccharomyces cerevisiae YHR128w FUR1 uracil phosphoribosyltransferase, start by similarity	Uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	Probable uracil phosphoribosyltransferase	Probable uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	Probable uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	highly similar to uniprot|P18562 Saccharomyces cerevisiae YHR128w FUR1;	Probable uracil phosphoribosyltransferase	DEHA2E09746p;highly similar to uniprot|P18562 Saccharomyces cerevisiae YHR128W FUR1 Uracil phosphoribosyltransferase synthesizes UMP from uracil;	Probable uracil phosphoribosyltransferase	identified by match to TIGR protein family HMM TIGR01744 uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	Putative uracil phosphoribosyltransferase	Probable uracil phosphoribosyltransferase	Probable uracil phosphoribosyltransferase	hypothetical uracil phosphoribosyltransferase	Putative uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase	
ECOLI02426	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cycloligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	hypothetical phosphoribosylformylglycinamidine cyclo-ligase	Phosphoribosylformylglycinamidine cyclo-ligase	
ECOLI02427	Phosphoribosylglycinamide formyltransferase	phosphoribosylglycinamide formyltransferase;	Phosphoribosyl-glycinamide transformylase, catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway. [Source:SGD;Acc:S000002816]	similar to sp|P04161 Saccharomyces cerevisiae YDR408c ADE8 phosphoribosylglycinamide formyltransferase (GART), start by similarity	5'-phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase [Source:GeneDB_Spombe;Acc:SPCC569.08c]	similar to sp|P04161 Saccharomyces cerevisiae YDR408c ADE8 phosphoribosylglycinamide formyltransferase (GART) singleton, start by similarity	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	5'-phosphoribosylglycinamide transformylase	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	5'-phosphoribosylglycinamide transformylase	Phosphoribosylglycinamide formyltransferase	highly similar to uniprot|P04161 Saccharomyces cerevisiae YDR408c ADE8 phosphoribosylglycinamide formyltransferase;	DEHA2G05764p;similar to uniprot|P04161 Saccharomyces cerevisiae YDR408C ADE8 Phosphoribosyl-glycinamide transformylase catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway;	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	Putative phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	Probable phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	Phosphoribosylglycinamide formyltransferase	
ECOLI02428	Polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	putative polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	Residues 3 to 690 of 690 are 99 pct identical to residues 1 to 688 of a 688 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289054.1 polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	IPR001736: Phospholipase D/Transphosphatidylase polyphosphate kinase, component of RNA degradosome	similar to Salmonella typhi CT18 polyphosphate kinase polyphosphate kinase	Polyphosphate kinase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme polyphosphate kinase (Polyphosphoric acid kinase) (ATP-polyphosphate phosphotransferase)	Similar to Vibrio parahaemolyticus polyphosphate kinase Ppk or VP0573 SWALL:BAC58836 (EMBL:AP005074) (696 aa) fasta scores: E(): 2.2e-103, 40.69% id in 688 aa, and to Escherichia coli, and Escherichia coli O157:H7 polyphosphate kinase Ppk or B2501 or Z3764 or ECS3363 SWALL:PPK_ECOLI (SWALL:P28688) (687 aa) fasta scores: E(): 1e-94, 38.82% id in 698 aa putative polyphosphate kinase	Polyphosphate kinase	Polyphosphate kinase	Code: P; COG: COG0855 polyphosphate kinase	Code: P; COG: COG0855 polyphosphate kinase	polyphosphate kinase pfam02503	polyphosphate kinase	Code: P; COG: COG0855 polyphosphate kinase	Polyphosphate kinase	
ECOLI02429	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Putative uncharacterized protein	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Putative exopolyphosphatase	putative exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	exopolyphosphatase	Exopolyphosphatase	Exopolyphosphatase	Residues 1 to 513 of 513 are 99 pct identical to residues 1 to 513 of a 513 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289055.1 exopolyphosphatase	Putative exopolyphosphatase	Ppx/GppA phosphatase	Probable exopolyphosphatase protein	
ECOLI02430	Inner membrane protein yfgF	Putative membrane protein	Hypothetical protein yfgF	Putative cytochrome C-type biogenesis protein	Signal transduction protein containing diguanylate cyclase/phosphodiesterase domain (GGDEF) and domain	FOG: EAL domain protein	IPR001633: EAL domain putative diguanylate cyclase	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative diguanylate cyclase	Code: T; COG: COG2200 putative cytochrome C-type biogenesis protein	Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)	Putative uncharacterized protein	Diguanylate cyclase/phosphodiesterase precursor	Putative uncharacterized protein yfgF	diguanylate cyclase/phosphodiesterase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein; EAL domain protein KEGG: mmc:Mmcs_2215 diguanylate cyclase/phosphodiesterase	conserved hypothetical protein putative inner membrane protein	Putative uncharacterized protein	diguanylate cyclase/phosphodiesterase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein; EAL domain protein KEGG: mmc:Mmcs_2215 diguanylate cyclase/phosphodiesterase	Diguanylate cyclase/phosphodiesterase precursor	Putative cytochrome C-type biogenesis protein	Putative uncharacterized protein	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Diguanylate cyclase/phosphodiesterase	Predicted inner membrane protein	Diguanylate cyclase/phosphodiesterase precursor	Putative cytochrome C-type biogenesis protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	

ECOLI02431	Uncharacterized protein yfgG	Residues 1 to 64 of 64 are 99 pct identical to residues 1 to 64 of a 64 aa protein from Escherichia coli K12 gi: 1788851 orf, conserved hypothetical protein	Putative exported protein	putative inner membrane protein	Putative exported protein	Putative inner membrane protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	Putative inner membrane protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	Predicted protein	YfgG protein	
ECOLI02432	Uncharacterized lipoprotein yfgH	Uncharacterized lipoprotein yfgH	Residues 1 to 172 of 172 are 98 pct identical to residues 1 to 172 of a 172 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289059.1 putative outer membrane lipoprotein	similar to Salmonella typhimurium putative outer membrane lipoprotein putative outer membrane lipoprotein	putative outer membrane lipoprotein	Code: M; COG: COG3133 putative outer membrane lipoprotein	Hypothetical membrane protein	Putative outer membrane lipoprotein	putative outer membrane lipoprotein	putative outer membrane lipoprotein	Surface antigen family protein	Predicted outer membrane lipoprotein	Surface antigen family protein	17 kDa surface antigen precursor	Surface antigen family protein	YfgH	Putative outer membrane lipoprotein	Surface antigen family protein	Putative lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Predicted outer membrane lipoprotein	Putative outer membrane lipoprotein	YfgH protein	Predicted outer membrane lipoprotein	Putative uncharacterized protein	
ECOLI02433	Uncharacterized protein yfgI	Hypothetical protein yfgI	Putative membrane protein	Residues 1 to 179 of 179 are 100 pct identical to residues 1 to 179 of a 179 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289060.1 putative membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	putative membrane protein	putative membrane protein	putative membrane protein	Putative uncharacterized protein	Putative membrane protein	putative membrane protein	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yfgI	pseudo	Putative uncharacterized protein yfgI	Putative uncharacterized protein yfgI	Putative uncharacterized protein yfgI	Predicted protein	Putative uncharacterized protein yfgI	
ECOLI02434	GMP synthase	GMP synthase;	GMP synthase, an enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation.  [Source:SGD;Acc:S000004830]	highly similar to sp|P38625 Saccharomyces cerevisiae YMR217w GUA1 GMP synthase (glutamine-hydrolyzing) singleton, start by similarity	GMP synthase	GMP synthase [glutamine-hydrolyzing] [Source:GeneDB_Spombe;Acc:SPAP7G5.02c]	highly similar to sp|P38625 Saccharomyces cerevisiae YMR217w GUA1 GMP synthase (glutamine-hydrolyzing) singleton, start by similarity	GMP synthase	GMP synthase	GMP synthase	GMP synthase	GMP synthetase	GMP synthase	GMP synthase	GMP synthase	GMP synthase	highly similar to uniprot|P38625 Saccharomyces cerevisiae YMR217w GUA1 GMP synthase;	DEHA2F11110p;similar to uniprot|P38625 Saccharomyces cerevisiae YMR217W GUA1 GMP synthase an enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'- phosphate (IMP);	similar to GB:M55405, SP:Q02505,  and PID:553593; identified by sequence similarity; putative GMP synthase	GMP synthase [glutamine-hydrolyzing] 1	GMP synthase	GMP synthase	GMP synthase	GMP synthase	GMP synthase	GMP synthase	GMP synthase	GMP synthase	GMP synthase	
ECOLI02435	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	similar to GB:L09247, GB:X54132, SP:P23470, PID:1263069, PID:292411,  and PID:35794; identified by sequence similarity; putative inosine-5`-monophosphate dehydrogenase, putative	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase	
ECOLI02437	Uncharacterized protein yfgJ	Putative uncharacterized protein	Hypothetical protein yfgJ	Putative uncharacterized protein	Putative uncharacterized protein VP0614	Residues 1 to 83 of 83 are 97 pct identical to residues 1 to 83 of a 83 aa protein from Escherichia coli K12 ref: NP_417005.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yfgJ	Hypothetical protein	ubiquitin ligase sinat5 identified by match to protein family HMM PF07191	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	
ECOLI02436	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exonuclease VII, large subunit:OB-fold nucleic acid binding domain	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	Exodeoxyribonuclease 7 large subunit	
ECOLI02438	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	similar to GB:Z29491, GB:S73196, GB:S73197, GB:D31846, SP:P41181, PID:474059,  and PID:567250; identified by sequence similarity; putative GTP-binding protein, Era/ThdF family	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	GTP-binding protein engA	
ECOLI02439	Lipoprotein yfgL	Putative uncharacterized protein	Serine/threonine protein kinase related protein	Quinoprotein dehydrogenase	PQQ enzyme repeat family protein	Putative uncharacterized protein	Putative uncharacterized protein VV0769	Putative lipoprotein	Putative uncharacterized protein	PQQ enzyme repeat family protein	Conserved hypothetical protein	Putative lipoprotein	Hypothetical protein yfgL	Putative uncharacterized protein	Putative quinoprotein	Putative quinoprotein	PQQ enzyme repeat domain protein	Putative lipoprotein	PQQ enzyme repeat domain protein	Putative quinoprotein	Lipoprotein, putative	Putative uncharacterized protein VP0611	Putative dehydrogenase	Putative uncharacterized protein	Residues 1 to 392 of 392 are 99 pct identical to residues 1 to 392 of a 392 aa protein from Escherichia coli K12 ref: NP_417007.1 putative dehydrogenase	Putative lipoprotein	PQQ enzyme repeat	Putative quinonprotein alcohol dehydrogenase-like transmembrane	Similar to unknown protein YfgL of Escherichia coli	
ECOLI02440	UPF0070 protein yfgM	UPF0070 protein HI0370	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV0768	Putative membrane protein	Putative membrane protein	conserved hypothetical protein	Hypothetical protein yfgM	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	UPF0070 protein BUsg_583	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein VP0610	Putative uncharacterized protein	Putative uncharacterized protein	UPF0070 protein BU608	Putative uncharacterized protein	Residues 1 to 206 of 206 are 98 pct identical to residues 1 to 206 of a 206 aa protein from Escherichia coli K12 ref: NP_417008.1 orf, conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein	Putative transmembrane protein	Similar to unknown protein YfgM of Escherichia coli	
ECOLI02441	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	similar to SP:P13429, GB:X16664, PID:42956, PID:967127,  and PID:264034; identified by sequence similarity; putative histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	Histidyl-tRNA synthetase	
ECOLI02442	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	
ECOLI02443	Cytoskeleton protein rodZ	Putative uncharacterized protein	Uncharacterized protein HI0367	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV0765	Cytoskeleton protein rodZ	Putative uncharacterized protein	hypothetical DNA-binding protein	Putative uncharacterized protein	Hypothetical protein yfgA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Cytoskeleton protein rodZ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP0607	Cytoskeleton protein rodZ	Putative uncharacterized protein	Residues 1 to 337 of 337 are 99 pct identical to residues 1 to 337 of a 337 aa protein from Escherichia coli O157:H7 ref: NP_311405.1 putative membrane protein	Cytoskeleton protein rodZ	Putative uncharacterized protein	Probable transmembrane protein	Similar to putative membrane protein YfgA of Escherichia coli	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	paral putative membrane protein	similar to Salmonella typhi CT18 putative DNA-binding protein putative DNA-binding protein	
ECOLI02444	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N 2	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Predicted Fe-S-cluster redox enzyme	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N	
ECOLI02445	Nucleoside diphosphate kinase	nucleoside diphosphate kinase;	Nucleoside diphosphate kinase, catalyzes the transfer of gamma phosphates from nucleoside triphosphates, usually ATP, to nucleoside diphosphates by a mechanism that involves formation of an autophosphorylated enzyme intermediate. [Source:SGD;Acc:S000001550]	highly similar to sp|P36010 Saccharomyces cerevisiae YKL067w YNK1 nucleoside diphosphate kinase, start by similarity	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase [Source:GeneDB_Spombe;Acc:SPAC806.07]	highly similar to sp|P36010 Saccharomyces cerevisiae YKL067w YNK1 nucleoside diphosphate kinase singleton, start by similarity	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	NUCLEOSIDE DIPHOSPHATASE KINASE A;06_1530, NUCLEOSIDE DIPHOSPHATASE KINASE A, NDKA_FLABI, gene found by Glimmer;	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	highly similar to uniprot|P36010 Saccharomyces cerevisiae YKL067w YNK1 nucleoside diphosphate kinase;	Nucleoside diphosphate kinase	DEHA2F12980p;similar to uniprot|P36010 Saccharomyces cerevisiae YKL067W YNK1 Nucleoside diphosphate kinase catalyzes the phosphorylation of nucleoside diphosphates into the corresponding triphosphates for nucleic acid biosynthesis;	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	Nucleoside diphosphate kinase	identified by match to PFAM protein family HMM PF00334 nucleoside diphosphate kinase	Nucleoside diphosphate kinase	
ECOLI02446	Penicillin-binding protein 1C	Penicillin-binding protein	Bifunctional penicillin-binding protein 1C	Bifunctional penicillin-binding protein 1C	Penicillin-binding protein 1C	Penicillin-binding protein, 1A family	Penicillin-binding protein 1F	Penicillin binding protein	Penicillin-binding protein 1C	Penicillin-binding protein 2	Penicillin-binding protein 1C	Bifunctional penicillin-binding protein	Penicillin-binding protein 1C	Penicillin-binding protein	Penicillin-binding protein	Product confidence : probable Gene name confidence : putative probable bifunctional penicillin-binding protein	Penicillin-binding protein	Penicillin-binding protein	Putative peptidoglycan enzyme	penicillin binding protein	Penicillin-binding protein	Penicillin binding protein	Penicillin binding protein	Residues 6 to 704 of 704 are 97 pct identical to residues 72 to 770 of a 770 aa protein from Escherichia coli K12 ref: NP_417014.1 putative peptidoglycan enzyme	Penicillin-binding protein 1C	identified by similarity to SP:P76577; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02073 penicillin-binding protein 1C	Bifunctional penicillin binding protein 1C	Penicillin-binding protein 1C	similar to Salmonella typhi CT18 penicillin-binding protein 1C penicillin-binding protein 1C	
ECOLI02447	Uncharacterized lipoprotein yfhM	Hypothetical cytosolic protein	UPF0192 protein PD_0518	Putative uncharacterized protein	Putative outer membrane protein, alpha-2- macroglobulin-like protein	Putative uncharacterized protein	UPF0192 protein RC0835	Putative uncharacterized protein	Putative lipoprotein	UPF0192 protein all5100	Putative uncharacterized protein	Hypothetical lipoprotein yfhM	Putative uncharacterized protein	Putative exported protein	Putative exported protein	Product confidence : hypothetical Gene name confidence : hypothetical conserved hypothetical protein, possibly exported	Lipoprotein, putative	Putative exported protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	UPF0192 protein RSc3030	Similar to hypothetical lipoprotein YfhM of Escherichia coli	identified by match to protein family HMM PF00024; match to protein family HMM PF01835; match to protein family HMM PF07703 PAN domain protein	Putative uncharacterized protein	UPF0192 protein XF_1252	Putative uncharacterized protein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	
ECOLI02448	3-mercaptopyruvate sulfurtransferase	Mitochondrial protein, required for formation of the 2-thio group of the 5-methoxycarbonylmethyl-2-thiouridine modified base in some tRNAs; has similarity to mammalian thiosulfate sulfurtransferase (rhodanese).  [Source:SGD;Acc:S000005777]	similar to tr|CAD60606 Podospora anserina, start by similarity	Thiosulfate sulfurtransferase	Putative 3-mercaptopyruvate sulfurtransferase [Source:GeneDB_Spombe;Acc:SPCC4B3.01]	similar to sp|Q08686 Saccharomyces cerevisiae YOR251c singleton, start by similarity	similar to uniprot|Q08686 Saccharomyces cerevisiae YOR251c;	Rhodanese family protein	Putative thiosulfate sulfurtransferase	hypothetical rhodanese-related sulfurtransferase	3-mercaptopyruvate sulfurtransferase	similar to GP:15156263, and GP:15074554; identified by sequence similarity; putative rhodanese family protein	Thiosulfate sulfurtransferase SseA, putative	go_component: cytoplasm [goid 0005737]; go_function: thiosulfate sulfurtransferase activity [goid 0004792] thiosulfate sulfurtransferase, putative	Mercaptopyruvate sulfurtransferase	3-mercaptopyruvate sulfurtransferase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE THIOSULFATE SULFURTRANSFERASE PROTEIN	PUTATIVE THIOSULFATE SULFURTRANSFERASE	Putative thiosulfate sulfurtransferase SseA	Putative sulfurtransferase	3-mercaptopyruvate sulfurtransferase	similar to AF109156-1|AAD19957.1| percent identity: 37 in 275 aa putative thiosulfate transferase	thiosulfate sulfurtransferase	Putative thiosulfate sulfurtransferase	3-mercaptopyruvate sulfurtransferase	identified by similarity to PIR:T52663; match to protein family HMM PF00581 thiosulfate sulfurtransferase, putative	Thiosulfate sulfurtransferase protein	IPR001307: Thiosulfate sulfurtransferase; IPR001763: Rhodanese-like putative sulfurtransferase	similar to Salmonella typhi CT18 putative thiosulfate sulfurtransferase putative thiosulfate sulfurtransferase	

ECOLI02449	Protein sseB	Protein sseB	Enhanced serine sensitivity protein	Enhanced serine sensitivity	Residues 1 to 261 of 261 are 99 pct identical to residues 1 to 261 of a 261 aa protein from Escherichia coli K12 ref: NP_417017.1 enhanced serine sensitivity	Putative uncharacterized protein	enhances serine sensitivity	similar to Salmonella typhi CT18 SseB protein SseB protein	Putative uncharacterized protein	Enhances serine sensitivity	enhanced serine sensitivity	enhanced serine sensitivity	enhanced serine sensitivity protein	enhanced serine sensitivity	Protein SseB	Hypothetical protein	Enhanced serine sensitivity	Hypothetical protein	Hypothetical protein	enhanced serine sensitivity	Hypothetical protein	enhanced serine sensitivity protein SseB	SseB family protein	SseB family protein	Enhanced serine sensitivity	Putative uncharacterized protein	SseB protein	SseB family protein	Rhodanase-like enzyme, sulfur transfer from thiosulfate	

ECOLI02450	Peptidase B	Putative peptidase B	similar to GB:X54937, SP:P21554, PID:1657841, PID:29915, PID:736237,  and PID:736239; identified by sequence similarity; putative leucine aminopeptidase	Peptidase B	Probable cytosol aminopeptidase	Peptidase B	Peptidase B	Putative peptidase B (Aminopeptidase B)	Peptidase B	Peptidase B	Peptidase B	Cytosol aminopeptidase	Peptidase B	Peptidase B	Cytosol aminopeptidase family protein	Probable cytosol aminopeptidase	Peptidase B	Residues 1 to 427 of 427 are 99 pct identical to residues 1 to 427 of a 427 aa protein PEPB_ECO57 sp: P58473 peptidase B (Aminopeptidase B)	Probable cytosol aminopeptidase	Peptidase B	Probable cytosol aminopeptidase	Peptidase B	Cytosol aminopeptidase	identified by match to protein family HMM PF00883 cytosol aminopeptidase family protein	IPR000819: Peptidase M17, cytosol aminopeptidase, C-terminal putative aminopeptidase	similar to Salmonella typhi Ty2 peptidase B peptidase B	probable cytosol aminopeptidase	Peptidase B	Ortholog of S. aureus MRSA252 (BX571856) SAR0904 cytosol aminopeptidase family protein	
ECOLI02451	Protein iscX	Putative uncharacterized protein	Uncharacterized protein PA3808	Putative uncharacterized protein VV0761	Putative uncharacterized protein STY2783	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Protein iscX	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein VP0602	Protein iscX	Putative uncharacterized protein	Residues 1 to 66 of 66 are 100 pct identical to residues 1 to 66 of a 66 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289081.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Similar to unknown protein YfhJ of Escherichia coli	Putative uncharacterized protein	believed to be involved in assembly of Fe-S clusters	Uncharacterized protein conserved in bacteria	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	
ECOLI02452	2Fe-2S ferredoxin	2Fe-2S ferredoxin	2Fe-2S ferredoxin-5	2Fe-2S ferredoxin	Ferredoxin, 2Fe-2S type	Fdx-1	2Fe-2S ferredoxin	Ferredoxin	Ferredoxin	FERREDOXIN	Ferredoxin, 2Fe-2S	Ferredoxin, iron-sulfur cluster assembly system	putative ferredoxin	Ferredoxin, 2Fe-2S	similar to GP:15156412; identified by sequence similarity; putative ferredoxin,  2Fe-2S	Ferredoxin	2Fe-2S ferredoxin	Ferredoxin, 2Fe-2S	Ferredoxin, 2Fe-2S	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE FERREDOXIN, 2FE-2S FDII ELECTRON TRANSPORT IRON-SULFUR PROTEIN	2Fe-2S ferredoxin	Ferredoxin, 2Fe-2S	Ferredoxin, 2Fe-2S	Ferredoxin	2Fe-2S ferredoxin	similar to AX065549-1|CAC26014.1| percent identity: 87 in 106 aa putative rhodocoxin	ferredoxin	2Fe-2S ferredoxin	Ferredoxin	
ECOLI02453	Chaperone protein hscA	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA	Chaperone protein hscA homolog	Chaperone protein hscA	Putative chaperone protein HscA	Chaperone protein hscA	identified by similarity to SP:P17820; match to protein family HMM PF00012 dnak protein, truncation	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA	Chaperone protein hscA	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA homolog	Chaperone protein hscA	Chaperone protein hscA	Chaperone protein hscA homolog	Residues 19 to 634 of 634 are 99 pct identical to residues 1 to 616 of a 616 aa protein from Escherichia coli O157:H7 ref: NP_311419.1 molecular chaperone	Chaperone protein hscA	Chaperone protein hscA homolog	Chaperone protein hscA	
ECOLI02454	Co-chaperone protein hscB	similar to sp|P53193 Saccharomyces cerevisiae YGL018c JAC1 molecular chaperone, start by similarity	J-type co-chaperone jac1, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC144.08]	similar to sp|P53193 Saccharomyces cerevisiae YGL018c JAC1 molecular chaperone singleton, start by similarity	Co-chaperone protein hscB homolog	Co-chaperone protein hscB homolog	Co-chaperone protein hscB homolog	Co-chaperone protein hscB homolog	Co-chaperone protein hscB homolog	Co-chaperone protein hscB homolog	Co-chaperone protein hscB	Co-chaperone protein hscB homolog	putative chaperone protein HscB	Co-chaperone protein hscB	Co-chaperone protein hscB homolog	Co-chaperone protein hscB homolog	Co-chaperone protein hscB homolog	Co-chaperone protein hscB	Co-chaperone protein hscB	Co-chaperone protein hscB homolog	Co-chaperone protein hscB homolog	Co-chaperone protein hscB homolog	Co-chaperone protein hscB	Co-chaperone protein hscB	Co-chaperone protein hscB homolog	Residues 1 to 171 of 171 are 98 pct identical to residues 1 to 171 of a 171 aa protein from Escherichia coli O157:H7 ref: NP_311420.1 molecular chaperone	Co-chaperone protein hscB	Co-chaperone protein hscB homolog	Co-chaperone protein hscB	
ECOLI02455	Iron-binding protein iscA	Putative uncharacterized protein	Iron-binding protein iscA	Putative uncharacterized protein	Putative uncharacterized protein	HesB/YadR/YfhF family protein	HesB protein	HesB/YadR/YfhF family protein	Putative uncharacterized protein	Probable iron-binding protein IscA	Uncharacterized conserved protein	Putative uncharacterized protein	Iron-binding protein iscA	Alr2385 protein	HesB family protein	HesB/YadR/YfhF family protein	Putative hesB family protein	Iron-binding protein iscA	identified by match to PFAM protein family HMM PF01521 HesB/YadR/YfhF family protein	HesB family protein	Iron-binding protein IscA/HesB	[Fe-S] cluster formation/repair protein	[Fe-S] cluster formation/repair protein	HesB/YadR/YfhF family protein	Iron-binding protein iscA	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Iron-binding protein IscA	[Fe-S] cluster formation/repair protein	Iron-sulfur cluster assembly accessory protein	
ECOLI02456	NifU-like protein	iron sulfur cluster assembly protein 1, mitochondrial precursor;	similar to DEHA0G25300g Debaryomyces hansenii DEHA-CDS5607.1 179aa protein Hypothetical ORF, start by similarity	Iron sulfur cluster assembly protein 1, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC227.13c]	some similarities with sgd|S0006056 Saccharomyces cerevisiae YPL135w ISU1, hypothetical start	NifU protein	NifU protein	NifU-like domain protein	nifU protein, putative	NIFU-LIKE PROTEIN;01_0510, NIFU-LIKE PROTEIN, NIFU_RICPR, ISU2_yeast, gene found by Glimmer;	NifU protein	NifU-like protein	highly similar to uniprot|Q12056 Saccharomyces cerevisiae YOR226c ISU2 or uniprot|Q03020 Saccharomyces cerevisiae YPL135w ISU1;	Nitrogen fixation protein	DEHA2G23958p;similar to uniprot|Q03020 Saccharomyces cerevisiae YPL135w ISU1 Conserved protein of the mitochondrial matrix;	NifU-like protein	Probable nitrogen fixation protein	NifU protein	NifU protein	IscU	Probable iron-binding protein IscU	NifU-related protein	NifU-like protein	Putative uncharacterized protein	NifU domain protein	putative NifU-related protein	NifU-like protein	NifU-related protein	Iron-sulfur cofactor synthesis protein IscU/NifU	
ECOLI02457	Cysteine desulfurase	cysteine desulfurase, mitochondrial precursor;	Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis; required for the post-transcriptional thio-modification of mitochondrial and cytoplasmic tRNAs; essential protein located predominantly in mitochondria.  [Source:SGD;Acc:S000000522]	highly similar to sp|P25374 Saccharomyces cerevisiae YCL017c NFS1 regulates Iron-Sulfur cluster proteins, cellular Iron uptake, and Iron distribution, hypothetical start	Probable cysteine desulfurase, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC21D10.11c]	highly similar to sp|P25374 Saccharomyces cerevisiae YCL017c NFS1 regulates Iron-Sulfur cluster proteins, cellular Iron uptake, andIron distribution singleton, hypothetical start	cysteine desulfurase, putative	NifS protein	NIFS-LIKE PROTEIN (CYSTEINE DESULFURASE) INVOLVED IN IRON-SULFUR CLUSTER SYNTHESIS;11_1770, NIFS-LIKE PROTEIN (CYSTEINE DESULFURASE) INVOLVED IN IRON-SULFUR CLUSTER SYNTHESIS, NFS1_CANAL, gene found by Glimmer;	Cysteine desulfurase	highly similar to uniprot|P25374 Saccharomyces cerevisiae YCL017c NFS1;	DEHA2G10956p;similar to uniprot|P25374 Saccharomyces cerevisiae YCL017C NFS1 Cysteine desulfurase involved in iron-sulfur cluster (Fe/S)biogenesis;	identified by match to PFAM protein family HMM PF03486 nifS protein, putative	NifS-like aminotransferase class-V	Cysteine desulfurase	Cysteine desulfurase	Cysteine desulfurase	Cysteine desulfurase	Cysteine desulfurase	Cysteine desulfurase	Alr2505 protein	Cysteine desulfurase	Cysteine desulfurase	Putative aminotransferase NifS, class V	Nitrogen fixation protein	Putative aminotransferase	Cysteine desulfurase	NifS protein, putative	Cysteine desulfurase	
ECOLI02458	HTH-type transcriptional regulator iscR	Putative HTH-type transcriptional regulator slr0846	Putative HTH-type transcriptional regulator HI0379	Putative uncharacterized protein CPE1786	RrF2 family protein	Putative uncharacterized protein	Putative HTH-type transcriptional regulator NMB1378	Putative uncharacterized protein	Putative uncharacterized protein	HTH-type transcriptional regulator iscR	Rrf2 protein	Rrf2 family protein	HTH-type transcriptional regulator iscR	Alr2081 protein	Rrf2 family protein	Lmo1515 protein	RRF2 family protein	Probable transcriptional regulator	Putative uncharacterized protein	hypothetical transcriptional regulator	HTH-type transcriptional regulator iscR	identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738 rrf2 family protein	Protein rrf2	HTH-type transcriptional regulator iscR	Putative DNA-binding protein	Putative DNA-binding protein	Rrf2 family protein	HTH-type transcriptional regulator iscR	Putative transcriptional regulator	
ECOLI02459	tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ	RNA methylase	RNA methyltransferase, TrmH family, group 1	TRNA/rRNA methyltransferase	SpoU rRNA methylase	Slr0120 protein	tRNA/rRNA methyltransferase	Hypothetical protein	Uncharacterized tRNA/rRNA methyltransferase HI0380	rRNA methylase	RRNA methylase	SpoU rRNA methylase family protein	Putative RNA methylase	Putative uncharacterized protein	Probable methyltransferase	RRNA methylase	RNA methyltransferase, putative	tRNA/rRNA methyltransferase	tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ	Putative tRNA/rRNA methyltransferase protein	putative RNA methyltransferase, TrmH family	RNA methyltransferase, TrmH family, group 1	Hypothetical tRNA/rRNA methyltransferase yfhQ	identified by match to TIGR protein family HMM TIGR00185 RNA methyltransferase, TrmH family, group 1	RNA methyltransferase, TrmH family	RNA methyltransferase, TrmH family	Probable methyltransferase	RNA methyltransferase, TrmH family, group 1	tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ	
ECOLI02460	Inositol-1-monophosphatase	Inositol-1-monophosphatase	Suppressor protein SuhB homolog	Inositol-1-monophosphatase	Extragenic suppressor protein suhB homolog	Inositol-1-monophosphatase	Suppressor protein	Extragenic supressor protein	Inositol-1-monophosphatase	Inositol-1-monophosphatase	Inositol-1-monophosphatase	Inositol-1-monophosphatase	Putative uncharacterized protein PH1897	Inositol-1-monophosphatase	Extragenic suppressor protein SuhB	Putative myo-inositol 1-monophosphatase	Inositol-1-monophosphatase	Imp1 hypothetical myo-inositol monophosphosphatase	Extragenic suppressor	hypothetical extragenic suppressor protein suhB	Possible myo-inositol-1(Or 4)-monophosphatase	Inositol monophosphatase protein family	Inositol-1-monophosphatase	Extragenic suppressor protein suhB	Inositol-1-monophosphatase	Inositol-1-monophosphatase	Inositol-1-monophosphatase	Inositol monophosphate family protein	Myo-inositol-1(Or 4)-monophosphatase	
ECOLI02461	Uncharacterized protein yfhR	similar to sp|P42840 Saccharomyces cerevisiae Hypothetical 32.3 kDa protein in KRE1-HXT14 intergenic region, hypothetical start	Bll7123 protein	Protein bem46 [Source:GeneDB_Spombe;Acc:SPBC32H8.03]	similar to sp|P42840 Saccharomyces cerevisiae YNL320w singleton, start by similarity	Putative uncharacterized protein	highly similar to uniprot|P42840 Saccharomyces cerevisiae YNL320w;	DEHA2A14146p;similar to uniprot|P42840 Saccharomyces cerevisiae YNL320W;	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein yfhR	All8511 protein	hypothetical protein	Putative Phospholipase/Carboxylesterase	Hypothetical protein yfhR	Putative exported protein	Putative exported protein	PMID: 9278503 best DB hits: BLAST: pir:E65030; hypothetical protein b2534 - Escherichia coli (strain; E=3e-07 gb:AAG57647.1; AE005483_6 (AE005483) putative enzyme (3.4.-); E=3e-07 gb:AAF51169.1; (AE003581) Bem46 gene product [Drosophila; E=2e-06 COG: yfhR; COG1073 Hydrolases of the alpha/beta superfamily; E=3e-08 VC1451; COG2931 RTX toxins and related Ca2+-binding proteins; E=0.001 PA3695; COG1073 Hydrolases of the alpha/beta superfamily; E=0.004 PFAM: PF00561; alpha/beta hydrolase fold; E=0.37 conserved hypothetical protein	Putative exported protein	hypothetical protein	hypothetical conserved protein	Uncharacterized protein yfhR	CDS_ID OB1074 hypothetical protein	BH1308 protein	Putative uncharacterized protein	Residues 1 to 293 of 293 are 98 pct identical to residues 1 to 293 of a 293 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289090.1 putative enzyme (3.4.-)	Similar to unknown protein hypothetical protein	conserved gene hypothetical protein	Similar to unknown protein hypothetical protein	
ECOLI02463	Probable 3-phenylpropionic acid transporter	Probable 3-phenylpropionic acid transporter	Membrane protein, putative	Putative uncharacterized protein	Probable major facilitator superfamily (MFS) transporter	Permease, putative	Permease	Putative 3-phenylpropionate permease	putative transport permease protein	Probable 3-phenylpropionic acid transporter	Putative uncharacterized protein	Probable 3-phenylpropionic acid transporter	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TARNSPORT PROTEIN TRANSMEMBRANE	PUTATIVE MFS METABOLITE TRANSPORTER	maltose permease	Putative transport permease protein	MFS (Major facilitator superfamily) transporter	probable transporter of 3-phenylpropionic acid	Putative phenylpropionate transporter	BH2276 protein	Permease of the major facilitator superfamily	Residues 1 to 379 of 379 are 99 pct identical to residues 1 to 379 of a 379 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289092.1 MFS (major facilitator superfamily) transporter	Putative transport permease protein	Probable 3-phenylpropionic acid transporter	3-phenylpropionic acid permease protein	IPR000576: Proton/sugar symporter, LacY family putative MFS family transport protein	similar to Salmonella typhi CT18 putative 3-phenylpropionate permease putative 3-phenylpropionate permease	Putative MFS family 3-phenylpropionic acid transporter	LacY proton/sugar symporter family	
ECOLI02462	Stationary phase-inducible protein csiE	Stationary phase inducible protein csiE	Putative uncharacterized protein csiE	Residues 1 to 425 of 425 are 99 pct identical to residues 2 to 426 of a 426 aa protein CSIE_ECOLI sp: P54901 stationary phase inducible protein CsiE	Putative RNA-binding protein	Putative uncharacterized protein	stationary phase inducible protein	similar to Salmonella typhi CT18 stationary phase inducible protein CsiE stationary phase inducible protein CsiE	hypothetical protein, similar to transcription antiterminator BglG family	Putative RNA-binding protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0329 putative PTS multidomain regulator	hypothetical protein, similar to transcription antiterminator BglG family	Stationary phase inducible protein	Similar to Bacillus subtilis putative cel operon regulator CelR SW:CELR_BACSU (P46321) (641 aa) fasta scores: E(): 3.3e-35, 28.063% id in 506 aa, and to Streptococcus pyogenes putative transcriptional antiterminator SPY1325 TR:Q99Z99 (EMBL:AE006571) (664 aa) fasta scores: E(): 3.2e-23, 22.430% id in 642 aa putative PTS multidomain regulator	Code: K; COG: COG3711 conserved hypothetical protein	identified by match to protein family HMM PF00359; match to protein family HMM PF00874 transcriptional antiterminator, BglG family	Code: K; COG: COG3711 conserved hypothetical protein	transcriptional antiterminator, BglG family identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF05043	probable PTS system regulator	Code: K; COG: COG3711; orf conserved hypothetical protein	Putative uncharacterized protein	Putative RNA-binding protein	conserved hypothetical protein	Stationary phase inducible protein CsiE	RNA-binding protein	Putative RNA-binding protein	conserved hypothetical protein Code: K; COG: COG3711	RNA-binding protein	stationary phase inducible protein CsiE	
ECOLI02464	Hca operon transcriptional activator	Transcriptional activator of hca cluster	transcriptional regulator	SCM10.15, probable lysR-family transcriptional regulator, len: 278 aa; similar to TR:CAB55655 (EMBL:AL117385) Streptomyces coelicolor putative lysR-family transcriptional regulator SC5G9.07c, 287 aa; fasta scores: opt: 598 z-score: 666.9 E(): 9.3e-30; 47.9% identity in 286 aa overlap and to SW:ALSR_BACSU (EMBL:L04470) Bacillus subtilis ALS operon regulatory protein AlsR, 302 aa; fasta scores: opt: 398 z-score: 446.6 E(): 1.7e-17; 37.6% identity in 186 aa overlap.  Contains Pfam match to entry PF00126 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family and two mathces to Prosite entries PS00044 Bacterial regulatory proteins, lysR family signature and PS00216 Sugar transport proteins signature 1. Contains also a helix-turn-helix motif at residues 16..37 (+5.84 SD) putative lysR-family transcriptional regulator	Residues 2 to 297 of 297 are 99 pct identical to residues 1 to 296 of a 296 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289093.1 transcriptional activator of hca cluster	Transcription activator of glutamate synthase operon	Fhu operon transcriptional regulator	transcription activator of glutamate synthase operon	Ortholog of S. aureus MRSA252 (BX571856) SAR0470 LysR family regulatory protein	transcription activator of glutamate synthase operon	Code: K; COG: COG0583 transcriptional activator of hca cluster	transcriptional activator of glutamate synthase operon	fhu operon transcription regulator	Hca cluster transcriptional activator	transcriptional activator of hca cluster Code: K; COG: COG0583	Transcription activator of glutamate synthase operon	Hca operon transcriptional activator	regulatory protein LysR PFAM: regulatory protein LysR KEGG: sav:SAV0471 transcription activator of glutamate synthase operon	transcriptional regulator, LysR family PFAM: regulatory protein, LysR	DNA-binding transcriptional activator of 3- phenylpropionic acid catabolism	Transcriptional regulator, LysR family	Hca operon transcriptional activator	Transcriptional regulator, LysR family	Hca operon transcriptional activator	Transcription regulator	Hca operon transcriptional activator	Transcriptional regulator	DNA-binding transcriptional activator of 3- phenylpropionic acid catabolism	DNA-binding transcriptional activator of 3- phenylpropionic acid catabolism	
ECOLI02465	3-phenylpropionate/cinnamic acid dioxygenase subunit alpha	Putative dioxygenase hydroxylase component	Putative dioxygenase hydroxylase component	3-phenylpropionate/cinnamic acid dioxygenase subunit alpha	Residues 1 to 453 of 453 are 99 pct identical to residues 1 to 453 of a 453 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289094.1 large terminal subunit of phenylpropionate dioxygenase	3-phenylpropionate/cinnamic acid dioxygenase subunit alpha	not found in other archaea, but often in bacteria aromatic ring dioxygenase subunit A	Code: PR; COG: COG4638 large terminal subunit of phenylpropionate dioxygenase	Code: PR; COG: COG4638 large terminal subunit of phenylpropionate dioxygenase	Ring hydroxylating dioxygenase, alpha subunit	Rieske (2Fe-2S) region	Rieske (2Fe-2S) domain protein	Ring hydroxylating dioxygenase, alpha subunit	Biphenyl dioxygenase subunit alpha	ring hydroxylating dioxygenase, alpha subunit PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein KEGG: sfx:S2757 large terminal subunit of phenylpropionate dioxygenase	ring-hydroxylating dioxygenase, large terminal subunit	large terminal subunit of phenylpropionate dioxygenase Code: PR; COG: COG4638	Biphenyl dioxygenase	ring hydroxylating dioxygenase, alpha subunit PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein KEGG: mmc:Mmcs_5458 ring hydroxylating dioxygenase, alpha subunit	Large terminal subunit of phenylpropionate dioxygenase	Ring hydroxylating dioxygenase, alpha subunit	3-phenylpropionate dioxygenase, large (Alpha) subunit	3-phenylpropionate dioxygenase alpha subunit	Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein	3-phenylpropionate dioxygenase alpha subunit	Phenylpropionate dioxygenase	Anthranilate dioxygenase large subunit	Rieske (2Fe-2S) domain protein	Anthranilate dioxygenase large subunit	
ECOLI02466	3-phenylpropionate/cinnamic acid dioxygenase subunit beta	Putative dioxygenase component	3-phenylpropionate/cinnamic acid dioxygenase subunit beta	Residues 1 to 172 of 172 are 99 pct identical to residues 1 to 172 of a 172 aa protein from Escherichia coli K12 ref: NP_417034.1 small terminal subunit of phenylpropionate dioxygenase	3-phenylpropionate/cinnamic acid dioxygenase subunit beta	not found in other archaea, but often in bacteria aromatic ring dioxygenase subunit B	Evidence 1 : Function experimentally demonstrated in the studied organism; PubMedId : 9721284; Product type e : enzyme anthranilate dioxygenase small subunit	Aromatic-ring-hydroxylating dioxygenase, beta subunit	Code: Q; COG: COG5517 small terminal subunit of phenylpropionate dioxygenase	Code: Q; COG: COG5517 small terminal subunit of phenylpropionate dioxygenase	Aromatic-ring-hydroxylating dioxygenase, beta subunit	Aromatic-ring-hydroxylating dioxygenase, beta subunit	Aromatic-ring-hydroxylating dioxygenase, beta subunit	Benzene 1,2-dioxygenase	putative dioxygenase, hydroxylase small component. Ring hydroxylating dioxygenases are multicomponent 1,2-dioxygenase complexes that convert closed-ring structures to non-aromatic cis-diols. The beta subunit is may be responsible for the substrate specificity of the enzyme. Putative 2'-aminobiphenyl-2,3-diol 1,2-dioxygenase, CarBa. Involved in the aerobic degradation of carbazole by P.resinovorans sp. strain CA10. XlyY: Benzene 12-dioxygenase beta subunit (EC 1.14.12.3), involved in benzoate degradation.Degradation of benzoate to 2-hydro-12-dihydroxybenzoate (dhb). Conserved hypothetical protein	aromatic-ring-hydroxylating dioxygenase, beta subunit PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit KEGG: bbr:BB0730 hydroxylating beta subunit of a dioxygenase system	putative ring-hydroxylating dioxygenase small subunit	small terminal subunit of phenylpropionate dioxygenase Code: Q; COG: COG5517	Benzene 1,2-dioxygenase subunit beta	3-phenylpropionate dioxygenase, beta subunit	Chlorobenzene dioxygenase, small subunit of terminal oxygenase	Aromatic-ring-hydroxylating dioxygenase, beta subunit	3-phenylpropionate dioxygenase, small (Beta) subunit	3-phenylpropionate dioxygenase beta subunit	Aromatic-ring-hydroxylating dioxygenase beta subunit	3-phenylpropionate dioxygenase beta subunit	Hypothetical biphenyl dioxygenase beta subunit	3-phenylpropionate dioxygenase beta subunit	3-phenylpropionate dioxygenase beta subunit	
ECOLI02467	3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit	Benzene 1,2-dioxygenase, ferredoxin protein	Benzene 1,2-dioxygenase, ferredoxin protein	Putative ferredoxin subunit of phenylpropionate dioxygenase	Ferredoxin, putative	Benzene 1,2-dioxygenase Rieske iron-sulfur component	Initial dioxygenase ferredoxin subunit	Rieske [2Fe-2S] domain protein	Ferredoxin	Biphenyl dioxygenase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE DIOXYGENASE FERREDOXIN PROTEIN	Naphthalene 1,2-dioxygenase system ferredoxin component	Putative dioxygenase ferredoxin subunit	3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit	similar to AF060489-3|AAC38618.1| percent identity: 36 in 83 aa putative ferredoxin	Benzene 1,2-dioxygenase, ferredoxin protein	SCC22.05c, possible dioxygenase ferredoxin subunit, len: 105 aa; similar to many e.g. SW:BEDB_PSEPU benzene dioxygenase from Pseudomonas putida ML2 (107 aa) fasta scores; opt: 286, z-score: 390.9, E(): 1.9e-14, (40.6% identity in 101 aa overlap) putative dioxygenase ferredoxin subunit	Dioxygenase ferredoxin subunit	Benzene 1,2-dioxygenase system ferredoxin component	Residues 1 to 106 of 106 are 100 pct identical to residues 1 to 106 of a 106 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289096.1 ferredoxin subunit of phenylpropionate dioxygenase	Putative Rieske protein	Probable ferredoxin subunit of a ring- hydroxylating dioxygenase oxidoreductase protein	3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit	Benzene 1,2-dioxygenase, ferredoxin protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark benzene 1,2-dioxygenase ferredoxin protein	Putative dioxygenase ferredoxin subunit	Benzene 1,2-dioxygenase ferredoxin protein	Putative Rieske protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pc : putative carrier putative ferredoxin	
ECOLI02468	3-phenylpropionate-dihydrodiol/cinnamic acid- dihydrodiol dehydrogenase	3-phenylpropionate-dihydrodiol/cinnamic acid- dihydrodiol dehydrogenase	Residues 1 to 270 of 270 are 99 pct identical to residues 1 to 270 of a 270 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289097.1 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	3-phenylpropionate-dihydrodiol/cinnamic acid- dihydrodiol dehydrogenase	Short-chain dehydrogenase protein	Short-chain dehydrogenase/reductase SDR	Code: IQR; COG: COG1028 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	Code: IQR; COG: COG1028 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	Short-chain dehydrogenase/reductase SDR	putative short-chain dehydrogenase/reductase similarity:fasta; with=UniProt:Q5V8A5_9CYAN (EMBL:AY588942); Lyngbya majuscula.; LtxD.; length=246; id 31.579; 247 aa overlap; query 5-241; subject 3-244 similarity:fasta; with=UniProt:Q93E09_RHILT (EMBL:AF372655); Rhizobium leguminosarum (biovar trifolii).; Putative short-chain dehydrogenase.; length=245; id 100.000; 245 aa overlap; query 1-245; subject 1-245	probable short-chain dehydrogenase protein similar to Orf2 [Rhizobium leguminosarum bv.  trifolii] Similar to entrez-protein:AAL14912.1 Putative location:bacterial inner membrane Psort-Score: 0.1044; go_function: oxidoreductase activity [goid 0016491]; go_process: metabolism [goid 0008152]	Short-chain dehydrogenase/reductase SDR	Short-chain dehydrogenase/reductase SDR	Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase	short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR KEGG: mmc:Mmcs_1685 short-chain dehydrogenase/reductase SDR	Hypothetical protein	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase Code: IQR; COG: COG1028	short chain dehydrogenase	Cis-toluene dihydrodiol dehydrogenase	2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	Short-chain dehydrogenase/reductase SDR	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	Short-chain dehydrogenase/reductase SDR	Putative dihydrodiol dehydrogenase	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	
ECOLI02469	3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component	NADH oxidase	Uncharacterized NAD(FAD)-dependent dehydrogenases	Putative aromatic hydrocarbons catabolism-related reductase	Putative ferredoxin reductase	Product confidence : probable Gene name confidence : probable putative ferredoxin reductase protein	Putative ferredoxin reductase	Putative ferredoxin reductase	Ferredoxin reductase	3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component	putative ferredoxin reductase MocF	Coenzyme A disulfide reductase	3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component	identified by similarity to GP:2792490; match to protein family HMM PF00070; match to protein family HMM PF02852 coenzyme A disulfide reductase	Coenzyme A disulfide reductase	Putative uncharacterized protein	Ferredoxin reductase protein	NADH oxidase	Putative uncharacterized protein gbs0266	coenzyme A disulfide reductase	identified by match to PFAM protein family HMM PF00070 NADH oxidase, putative	Ortholog of S. aureus MRSA252 (BX571856) SAR0933 coenzyme A disulfide reductase	coenzyme A disulfide reductase	identified by match to protein family HMM PF00070; match to protein family HMM PF07992 pyridine nucleotide-disulphide oxidoreductase domain protein	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Previously sequenced as Staphylococcus aureus coenzyme A disulfide reductase TR:O52582 (EMBL:AF041467) (438 aa) fasta scores: E(): 3.3e-162, 99.087% id in 438 aa. Similar to Lactococcus lactis NADH oxidase NoxC TR:Q9CHE6 (EMBL:AE006312) (547 aa) fasta scores: E(): 1.3e-49, 36.878% id in 442 aa coenzyme A disulfide reductase	identified by match to protein family HMM PF00070; match to protein family HMM PF07992 pyridine nucleotide-disulfide oxidoreductase	Code: R; COG: COG0446 ferredoxin reductase subunit of phenylpropionate dioxygenase	identified by similarity to GP:2792490; match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992 coenzyme A disulfide reductase	
ECOLI02470	Inner membrane protein yphA	Putative membrane protein	Hypothetical protein yphA	DoxD-like family protein	Putative uncharacterized protein yphA	Residues 1 to 164 of 164 are 100 pct identical to residues 1 to 164 of a 164 aa protein from Escherichia coli K12 ref: NP_417038.1 orf, conserved hypothetical protein	Probable transmembrane protein	SURF4 domain protein	identified by similarity to GP:29541645; match to protein family HMM PF07681 conserved hypothetical protein	Code: S; COG: COG2259 conserved hypothetical protein	DoxX	DoxD-like family protein identified by match to protein family HMM PF07681	Putative membrane protein	DoxX	DoxX	Putative uncharacterized protein yphA	Putative membrane protein	DoxX family protein PFAM: DoxX family protein KEGG: rpc:RPC_2341 DoxX	DoxD-like family protein identified by match to protein family HMM PF07681	DoxX family protein identified by match to protein family HMM PF07681	conserved hypothetical protein; putative DoxD-like transmembrane protein Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein Code: S; COG: COG2259	Hypothetical protein	conserved hypothetical protein	DoxX family protein	DoxD-like family protein	DoxX family protein	DoxX family protein	DoxX family protein	
ECOLI02471	Uncharacterized protein yphB	Hypothetical protein yphB	glimmer prediction hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yphB	hypothetical protein	Residues 1 to 290 of 290 are 98 pct identical to residues 1 to 290 of a 290 aa protein from Escherichia coli K12 ref: NP_417039.1 orf, conserved hypothetical protein	Putative uncharacterized protein	identified by match to protein family HMM PF01263 aldose 1-epimerase family protein	Aldose 1-epimerase	Code: G; COG: COG2017 conserved hypothetical protein	Code: G; COG: COG2017 conserved hypothetical protein	putative epimerase similarity:fasta; with=UniProt:YPHB_ECOLI (EMBL:U00096); Escherichia coli.; yphB; Hypothetical protein yphB.; length=290; id 37.676; 284 aa overlap; query 12-284; subject 6-285	Aldose 1-epimerase PFAM: Aldose 1-epimerase: (1.2e-31) KEGG: dra:DR0747 aldose epimerase family protein, ev=1e-120, 70% identity	Aldose 1-epimerase precursor	Aldose 1-epimerase subfamily, putative identified by match to protein family HMM PF01263	Putative uncharacterized protein	Putative uncharacterized protein yphB	Aldose 1-epimerase PFAM: Aldose 1-epimerase KEGG: bur:Bcep18194_A3707 aldose 1-epimerase	Aldose 1-epimerase PFAM: Aldose 1-epimerase KEGG: bur:Bcep18194_A3707 aldose 1-epimerase	Aldose 1-epimerase	Aldose 1-epimerase PFAM: Aldose 1-epimerase KEGG: bcn:Bcen_0142 aldose 1-epimerase	Putative aldose-1-epimerase	Aldose 1-epimerase family identified by match to protein family HMM PF01263	conserved hypothetical protein Code: G; COG: COG2017	conserved hypothetical protein	Aldose 1-epimerase family protein	Aldose 1-epimerase	
ECOLI02472	Uncharacterized zinc-type alcohol dehydrogenase- like protein yphC	Putative oxidoreductase	Residues 1 to 364 of 364 are 98 pct identical to residues 1 to 364 of a 364 aa protein from Escherichia coli K12 ref: NP_417040.1 putative oxidoreductase	Zinc-containing alcohol dehydrogenase superfamily	Code: ER; COG: COG1063 putative oxidoreductase	Code: ER; COG: COG1063 putative oxidoreductase	putative alcohol dehydrogenase similarity:fasta; SWALL:ADH3_BACST (SWALL:P42328); Bacillus stearothermophilus; alcohol dehydrogenase; length 339 aa; 297 aa overlap; query 12-303 aa; subject 13-301 aa similarity:fasta; SWALL:Q8FF35 (EMBL:AE016764); Escherichia coli O6; hypothetical zinc-type alcohol dehydrogenase-like protein YphC; yphC; length 364 aa; 345 aa overlap; query 8-340 aa; subject 22-362 aa	Hypothetical zinc-type alcohol dehydrogenase-like protein YphC	Sorbitol dehydrogenase	Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: sbo:SBO_2571 putative oxidoreductase	Putative zinc-containing alcohol dehydrogenase	putative oxidoreductase Code: ER; COG: COG1063	Oxidoreductase, zinc-binding dehydrogenase family protein	putative oxidoreductase, Zn-dependent and NAD(P)-binding	Oxidoreductase, zinc-binding dehydrogenase family	Alcohol dehydrogenase zinc-binding domain protein	Predicted oxidoreductase, Zn-dependent and NAD(P) -binding	Alcohol dehydrogenase, zinc-binding domain protein	Oxidoreductase, zinc-binding dehydrogenase family	Alcohol dehydrogenase zinc-binding domain protein	Oxidoreductase, zinc-binding dehydrogenase family	Alcohol dehydrogenase zinc-binding domain protein	putative quinone oxidoreductase	Putative oxidoreductase	Putative oxidoreductase, Zn-dependent and NAD(P)- binding	Putative oxidoreductase, Zn-dependent and NAD(P)- binding	Putative oxidoreductase, Zn-dependent and NAD(P)- binding	Putative oxidoreductase, Zn-dependent and NAD(P)- binding	Putative oxidoreductase, Zn-dependent and NAD(P)- binding	
ECOLI02473	Probable ABC transporter permease protein yphD	Putative transport system permease protein	Residues 1 to 332 of 332 are 99 pct identical to residues 1 to 332 of a 332 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289102.1 putative transport system permease protein	ABC transporter, permease protein	Code: G; COG: COG1172 putative transport system permease protein	Code: G; COG: COG1172 putative transport system permease protein	Hypothetical ABC transporter permease protein YphD	Hypothetical ABC transporter permease protein yphD	ABC-type uncharacterized transport system, permease component	putative transport system permease protein Code: G; COG: COG1172	Ribose transport system permease protein RbsC	ABC-type sugar transport system permease component YphD	Putative sugar ABC transporter, permease protein	Monosaccharide-transporting ATPase	Predicted sugar transporter subunit: membrane component of ABC superfamily	Putative sugar ABC transporter, permease protein	Monosaccharide-transporting ATPase	Putative sugar ABC transporter, permease protein	Putative sugar ABC transporter, permease protein	Putative ABC transporter permease component	Putative sugar transporter subunit: membrane component of ABC superfamily	Putative sugar transporter subunit: membrane component of ABC superfamily	Putative sugar transporter subunit: membrane component of ABC superfamily	Putative sugar transporter subunit: membrane component of ABC superfamily	Putative sugar transporter subunit: membrane component of ABC superfamily	Predicted sugar transporter subunit: membrane component of ABC superfamily	Putative sugar transporter subunit: membrane component of ABC superfamily	YphD protein	ABC transporter, permease protein	
ECOLI02474	Uncharacterized ABC transporter ATP-binding protein yphE	Putative ATP-binding component of a transport system	ATP-binding protein of sugar ABC transporter	Residues 1 to 503 of 503 are 99 pct identical to residues 1 to 503 of a 503 aa protein from Escherichia coli K12 ref: NP_417042.1 putative ATP-binding component of a transport system	ABC-type protease secretion system, ATPase and permease component, AprD	Similar to rp||aprD sp|Q03024|APRD_PSEAE sp|P23596|PRTD_ERWCH; Ortholog to ERGA_CDS_06490 Alkaline protease secretion ATP-binding protein AprD	Similar to rp||aprD sp|Q03024|APRD_PSEAE sp|P23596|PRTD_ERWCH; Ortholog to ERWE_CDS_06580 Alkaline protease secretion ATP-binding protein AprD	Code: G; COG: COG1129 putative ATP-binding component of a transport system	Code: G; COG: COG1129 putative ATP-binding component of a transport system	Hypothetical ABC transporter ATP-binding protein YphE	cobalt transport protein ATP-binding subunit	Hypothetical ABC transporter ATP-binding protein yphE	ABC transporter related	putative ATP-binding component of a transport system Code: G; COG: COG1129	ABC-type sugar transport system, ATP-binding component YphE	Putative sugar ABC transporter, ATP-binding protein	ABC transporter-related protein	Fused predicted sugar transporter subunits of ABC superfamily: ATP-binding components	Putative sugar ABC transporter, ATP-binding protein	ABC transporter related	Putative sugar ABC transporter, ATP-binding protein	Putative sugar ABC transporter, ATP-binding protein	Putative ABC transporter ATP-binding component	Fused putative sugar transporter subunits of ABC superfamily: ATP-binding components	Fused putative sugar transporter subunits of ABC superfamily: ATP-binding components	Fused putative sugar transporter subunits of ABC superfamily: ATP-binding components	Fused putative sugar transporter subunits of ABC superfamily: ATP-binding components	Fused putative sugar transporter subunits of ABC superfamily: ATP-binding components	Fused predicted sugar transporter subunits of ABC superfamily: ATP-binding components	
ECOLI02475	ABC transporter periplasmic-binding protein yphF	Putative LACI-type transcriptional regulator	Code: G; COG: COG1879 putative LACI-type transcriptional regulator	Code: G; COG: COG1879 putative LACI-type transcriptional regulator	ABC transporter periplasmic binding protein YphF	ABC transporter Periplasmic binding protein YphF	putative LACI-type transcriptional regulator Code: G; COG: COG1879	ABC transporter periplasmic-binding protein YphF	ABC-type sugar transport system, periplasmic component YphF	Putative sugar ABC transporter, periplasmic sugar -binding protein	Periplasmic binding protein/LacI transcriptional regulator precursor	Predicted sugar transporter subunit: periplasmic- binding component of ABC superfamily	Putative sugar ABC transporter, periplasmic sugar -binding protein	Periplasmic binding protein/LacI transcriptional regulator precursor	Putative sugar ABC transporter, periplasmic sugar -binding protein	Sugar ABC transporter, periplasmic sugar-binding protein	Putative transcriptional regulator	Putative sugar transporter subunit: periplasmic- binding component of ABC superfamily	Putative sugar transporter subunit: periplasmic- binding component of ABC superfamily	Putative sugar transporter subunit: periplasmic- binding component of ABC superfamily	Putative sugar transporter subunit: periplasmic- binding component of ABC superfamily	Putative sugar transporter subunit: periplasmic- binding component of ABC superfamily	Predicted sugar transporter subunit: periplasmic- binding component of ABC superfamily	Putative sugar transporter subunit: periplasmic- binding component of ABC superfamily	YphF protein	Periplasmic binding protein/LacI transcriptional regulator	Predicted sugar transporter subunit: periplasmic- binding component of ABC superfamily	Predicted sugar transporter subunit: periplasmic- binding component of ABC superfamily	predicted sugar transporter subunit periplasmic-binding component of ABC superfamily	
ECOLI02476	Uncharacterized protein yphG	Putative uncharacterized protein	Hypothetical protein yphG	Putative uncharacterized protein yphG	Residues 1 to 1033 of 1033 are 98 pct identical to residues 92 to 1124 of a 1124 aa protein from Escherichia coli K12 ref: NP_417044.1 orf, conserved hypothetical protein	Similar to Bacteroides thetaiotaomicron TPR-domain containing protein BT4398 SWALL:AAO79503 (EMBL:AE016945) (1093 aa) fasta scores: E(): 0, 61.95% id in 1096 aa, and to Escherichia coli O6 hypothetical protein YphG or C3071 SWALL:Q8FF32 (EMBL:AE016764) (1124 aa) fasta scores: E(): 4.9e-127, 41.68% id in 1070 aa, and to Escherichia coli hypothetical protein YphG or B2549 SWALL:YPHG_ECOLI (SWALL:P76585) (1124 aa) fasta scores: E(): 1.8e-126, 41.36% id in 1071 aa putative TPR-domain protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yphG	conserved hypothetical protein TPR repeat domain	TPR repeat containing protein	TPR-domain containing protein	Putative transferase	Tetratricopeptide repeat protein	Tetratricopeptide TPR_2 repeat protein	Conserved protein	TPR repeat-containing protein	Tetratricopeptide repeat protein	Tetratricopeptide TPR_2 repeat protein	Tetratricopeptide repeat protein	Putative uncharacterized protein	Tetratricopeptide repeat protein	Putative uncharacterized protein	Putative uncharacterized protein yphG	Tetratricopeptide TPR_4	Putative uncharacterized protein yphG	Putative uncharacterized protein yphG	Putative uncharacterized protein yphG	Putative uncharacterized protein yphG	
ECOLI02477	Uncharacterized protein yphH	Putative NAGC-like transcriptional regulator	SCG22.06, probable transcriptional repressor, len: 413 aa; similar to TR:O05180 (EMBL:Z71474) Bacillus megaterium Xyl repressor XylR, 388 aa; fasta scores: opt: 382 z-score: 417.8 E(): 8.5e-16; 31.3% identity in 386 aa overlap and to TR:CAB61583 (EMBL:AL133210) Streptomyces coelicolor possible xylose repressor SCF37.02, 402 aa; fasta scores: opt: 586 z-score: 523.0 E(): 1.5e-23; 48.0% identity in 396 aa overlap. Contains Pfam match to entry PF00480 ROK, ROK family and a possible helix-turn-helix motif at residues 35..56 (+3.03 SD) putative transcriptional repressor	Residues 1 to 399 of 399 are 98 pct identical to residues 1 to 399 of a 399 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289106.1 putative NAGC-like transcriptional regulator	Code: KG; COG: COG1940 putative NAGC-like transcriptional regulator	Code: KG; COG: COG1940 putative NAGC-like transcriptional regulator	putative ROK family transcriptional regulator similarity:fasta; with=UniProt:Q9F9B3_RHIME (EMBL:AF196574); Rhizobium meliloti (Sinorhizobium meliloti).; frcR; FrcR.; length=409; id 29.275; 386 aa overlap; query 7-385; subject 17-394 similarity:fasta; with=UniProt:Q98FS5_RHILO (EMBL:BA000012); Rhizobium loti (Mesorhizobium loti).; Mll3638 protein.; length=412; id 74.436; 399 aa overlap; query 1-398; subject 9-406	probable transcriptional regulator protein, ROK family similar to SMb21222 [Sinorhizobium meliloti] Similar to swissprot:Q92VH8 Putative location:bacterial inner membrane Psort-Score: 0.1999; go_component: intracellular [goid 0005622]; go_component: extrachromosomal DNA [goid 0046821]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	Putative uncharacterized protein	Putative uncharacterized protein yphH	xylose repressor	ROK domain containing protein	putative NAGC-like transcriptional regulator Code: KG; COG: COG1940	ROK domain containing protein PFAM: ROK domain containing protein KEGG: mlo:mlr3714 Xyl repressor	putative transcriptional regulator YchA	Putative NAGC-like transcriptional regulator	ROK family protein	ROK family protein	ROK family protein	ROK family protein	Predicted DNA-binding transcriptional regulator	ROK family protein	ROK family protein	ROK family protein	Putative uncharacterized protein	ROK family protein	Putative transcriptional repressor of the xylose operon	Probable transcriptional regulator protein, ROK family	ROK family protein	
ECOLI02478	Serine hydroxymethyltransferase	highly similar to sp|P37291 Saccharomyces cerevisiae YLR058c SHM2 serine hydroxymethyltransferase, cytoplasmic, start by similarity	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	similar to uniprot|P37292 Saccharomyces cerevisiae YBR263w serine hydroxymethyltransferase precursor;	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase 1	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	putative serine hydroxymethyltransferase	Serine hydroxymethyltransferase	Serine hydroxymethyltransferase	
ECOLI02479	Flavohemoprotein	Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification; plays a role in the oxidative and nitrosative stress responses.  [Source:SGD;Acc:S000003466]	similar to sp|P39676 Saccharomyces cerevisiae YGR234w YHB1 flavohemoglobin, start by similarity	Flavohemoprotein [Source:GeneDB_Spombe;Acc:SPAC869.02c]	similar to sp|P39676 Saccharomyces cerevisiae YGR234w YHB1 flavohemoglobin singleton, start by similarity	Flavohemoprotein	highly similar to uniprot|P39676 Saccharomyces cerevisiae YGR234w YHB1 flavohemoglobin;	DEHA2G24816p;weakly similar to uniprot|P39676 Saccharomyces cerevisiae YGR234w YHB1 flavohemoglobin;	Flavohemoprotein	Flavohemoprotein	Flavohemoprotein	Flavohemoprotein	Flavohemoprotein	Hemoglobin-like flavoprotein	Flavohemoprotein	Flavohemoprotein	Flavohemoprotein	putative Flavodoxin reductase	Flavohemoprotein	identified by match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970 flavohemoprotein	Flavohemoprotein	Flavohemoprotein	Flavohemoprotein	go_component: cytoplasm [goid 0005737]; go_process: response to stress [goid 0006950] response to stress-related protein, putative	Flavohemoprotein	PMID: 8557026 PMID: 1594608 best DB hits: BLAST: ddbj:BAA83959.1; (AB024563) HMP [Bacillus halodurans] -----; E=7e-96 swissprot:P39662; HMPA_ALCEU FLAVOHEMOPROTEIN (HEMOGLOBIN-LIKE; E=8e-92 pir:A82854; flavohemoprotein XF0053 [imported] - Xylella fastidiosa; E=8e-83 COG: BH1058_2; COG1018 Flavodoxin reductases (ferredoxin-NADPH; E=1e-53 BH1058_1; COG1017 Hemoglobin-like flavoprotein; E=1e-35 hmp_2; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases); E=6e-34 PFAM: PF00042; Globin; E=7e-19 PF00970; Oxidoreductase FAD-binding dom; E=2.9e-08 PF01794; Ferric reductase like transmem; E=0.13 HMP	glimmer prediction; picked different start site based on line-up with other proteins putative flavohemoglobin like protein	Flavohemoprotein	flavohemoglobin	
ECOLI02480	Nitrogen regulatory protein P-II 1	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II 2	P-II family protein	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II 1	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein PII	Nitrogen regulatory protein PII	Nitrogen regulatory protein P-II 1	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II 2	Putative nitrogen regulatory protein P-II	Regulatory protein P-II for glutamine synthetase	Nitrogen regulatory protein P-II 1	similar to GP:15156872, GB:X12795, GB:X16155, SP:P10589, PID:30140, and PID:31067; identified by sequence similarity; putative nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Nitrogen regulatory protein	Nitrogen regulatory protein	Nitrogen regulatory protein P-II 1	Nitrogen regulatory protein P-II	PMID: 2907369 PMID: 2885322 PMID: 2907369 PMID: 8226691 best DB hits: BLAST: pir:D82102; nitrogen regulatory protein P-II VC2239 [imported] -; E=9e-35 pir:H81961; nitrogen regulatory protein P-II 1 NMA0447 [imported] -; E=3e-34 pir:B81019; nitrogen regulatory protein P-II NMB1995 [imported] -; E=3e-34 COG: VC2239; COG0347 Nitrogen regulatory protein PII; E=9e-36 PFAM: PF00543; Nitrogen regulatory protein P-II; E=7.7e-53 nitrogen regulatory protein P-II	predicted by Codon_usage predicted by Homology predicted by FrameD NITROGEN REGULATORY PROTEIN PII	
ECOLI02481	Uncharacterized protein yfhA	TyrR	Putative transcriptional regulator	Hypothetical protein yfhA	Two-component system response regulator	Uncharacterized protein yfhA	Residues 14 to 457 of 457 are 99 pct identical to residues 1 to 444 of a 444 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289110.1 putative 2-component transcriptional regulator	Two-component system response regulator	Putative transcriptional regulator of two- component regulator protein	Similar to putative 2-component transcriptional regulator YfhA of Escherichia coli	IPR001789: Response regulator receiver; IPR002078: Sigma-54 factor interaction domain; IPR002197: Helix-turn-helix, Fis-type putative transcriptional regulator of two-component regulator protein (EBP familiiy)	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Two-component system response regulator	Putative transcriptional regulator of two- component regulator protein	probable two-component transcriptional regulator	Code: T; COG: COG2204 putative 2-component transcriptional regulator	Two component transpcriptional regulator, fis family	Two component response regulator	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type r : regulator putative response regulator in two-component regulatory system	Code: T; COG: COG2204 putative 2-component transcriptional regulator	Two Component Transcriptional Regulator, Fis family	two component, sigma54 specific, transcriptional regulator, Fis family	two component, sigma54 specific, transcriptional regulator, Fis family	sigma 54-dependent transcriptional activator containing CheY-like receiver domain Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains COG2204	Code: T; COG: COG2204 putative 2-component transcriptional regulator	Putative uncharacterized protein	Two-component system response regulator	Two component, sigma54 specific, transcriptional regulator, Fis family	Putative uncharacterized protein yfhA	
ECOLI02482	Uncharacterized protein yfhG	Hypothetical protein yfhG	Uncharacterized protein yfhG	Residues 1 to 239 of 239 are 99 pct identical to residues 1 to 239 of a 239 aa protein from Escherichia coli gb: AAA79817.1 orf, conserved hypothetical protein	Putative lipoprotein	Similar to putative alpha helix protein YfhG of Escherichia coli	putative transcriptional regulator of two-component regulator protein (EBP familiiy)	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative transcriptional regulator of two- component regulator protein	putative alpha helix protein	putative alpha helix protein	putative alpha helix protein	Putative uncharacterized protein	Putative uncharacterized protein yfhG	Putative lipoprotein	putative alpha helix protein	conserved hypothetical protein	Putative uncharacterized protein	Putative alpha helix protein	Putative uncharacterized protein	Putative lipoprotein	Lipoprotein	Conserved protein	Putative lipoprotein	Putative alpha helix protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02483	Putative sensor-like histidine kinase yfhK	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor histidine kinase	identified by match to TIGR protein family HMM TIGR01386 osmolarity sensor protein EnvZ, putative	Sensor protein	Sensor protein	Sensor protein	Sensor protein	two-component sensor histidine kinase	Sensor protein	Residues 1 to 496 of 496 are 99 pct identical to residues 1 to 496 of a 496 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289112.1 putative 2-component sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	IPR003594: ATP-binding region, ATPase-like; IPR003660: Histidine kinase, HAMP region; IPR003661: Histidine kinase A, N-terminal;IPR004358: Bacterial sensor protein, C-terminal;IPR005467: Histidine kinase putative sensory kinase in regulatory system	similar to Salmonella typhi CT18 putative sensor kinase protein putative sensor kinase protein	similar to BRA0473, osmolarity sensor protein EnvZ, hypothetical hypothetical osmolarity sensor protein EnvZ	Sensor protein	VncS, histidine kinase	Similar to Bacteroides thetaiotaomicron two-component system sensor histidine kinase BT1447 SWALL:Q8A7S7 (EMBL:AE016931) (785 aa) fasta scores: E(): 2.7e-73, 41.82% id in 636 aa, and to Bacteroides thetaiotaomicron two-component system sensor histidine kinase/response regulator, hybrid BT1183 SWALL:Q8A8I4 (EMBL:AE016930) (1336 aa) fasta scores: E(): 1.2e-50, 32.63% id in 521 aa putative two-component sensor histidine kinase with PAS domain	Sensor protein	Sensor protein	Sensory transduction histidine kinase	identified by similarity to SP:P52101; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor histidine kinase	

ECOLI02484	Phosphoribosylformylglycinamidine synthase	phosphoribosylformylglycinamidine synthase;	Formylglycinamidine-ribonucleotide (FGAM)- synthetase, catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway.  [Source:SGD;Acc:S000003293]	similar to sp|P38972 Saccharomyces cerevisiae YGR061c ADE6 5 -phosphoribosylformyl glycinamidine synthetase, start by similarity	Probable phosphoribosylformylglycinamidine synthase [Source:GeneDB_Spombe;Acc:SPAC6F12.10c]	highly similar to sp|P38972 Saccharomyces cerevisiae YGR061c ADE6 5 -phosphoribosylformyl glycinamidine synthetase singleton, start by similarity	Phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase II, putative	Phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	highly similar to uniprot|P38972 Saccharomyces cerevisiae YGR061c Phosphoribosylformylglycinamidine synthase;	DEHA2G22792p;similar to uniprot|P38972 Saccharomyces cerevisiae YGR061C ADE6 Formylglycinamidine-ribonucleotide (FGAM)- synthetase catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway,;	Putative phosphoribosylformylglycinamidine synthase	PurL	Phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	Probable phosphoribosylformylglycinamidine synthase	Putative phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	Putative phosphoribosylformylglycinamidine (FGAM) synthase	Phosphoribosylformylglycinamidine synthase	Putative phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	Phosphoribosylformylglycinamidine synthase	
ECOLI02486	tRNA-specific adenosine deaminase	Probable cytosine deaminase [Source:GeneDB_Spombe;Acc:SPCC965.14c]	Deoxycytidylate deaminase	Cytidine/deoxycytidylate deaminase family protein	Cytosine deaminase	Sll1631 protein	Putative uncharacterized protein	BELONGS TO THE CYTIDINE AND DEOXYCYTIDYLATE DEAMINASE FAMILY;09_1960, BELONGS TO THE CYTIDINE AND DEOXYCYTIDYLATE DEAMINASE FAMILY, TAD2_yeast, gene found by Glimmer;	tRNA-specific adenosine deaminase	identified by match to PFAM protein family HMM PF00383 cytidine/deoxycytidylate deaminase family protein	Putative cytosine/adenosine deaminase	Cytosine deaminase, putative	Putative cytidine/deoxycytidine deaminase	Possible cytidine and deoxycytidylate deaminase	tRNA-specific adenosine deaminase	Cytidine/deoxycytidylate deaminase family protein	Putative cytidine/deoxycytidylate deaminase	Putative uncharacterized protein CPE0031	Cytidine/deoxycytidylate deaminase family protein	Cytidine and deoxycytidylate deaminase family protein	Uncharacterized deaminase RC1285	Cytidine and deoxycytidylate deaminase family protein	Putative uncharacterized protein	Putative uncharacterized protein	Cytosine/adenosine deaminase	Cytidine and deoxycytidylate deaminase	tRNA-specific adenosine deaminase	All4872 protein	Cytidine/deoxycytidylate deaminase zinc-binding domain protein	
ECOLI02485	Membrane-bound lytic murein transglycosylase F	Glycoside hydrolase family 23	Membrane-bound lytic murein transglycosylase F	Membrane-bound lytic murein transglycosylase F	Transglycosylase, Slt family	Membrane-bound lytic murein transglycosylase F	Transglycosylase	putative transglycosylase, Slt family	Putative periplasmic binding transport protein	Hypothetical protein yfhD	Transglycosylase SLT domain protein	Membrane-bound lytic murein transglycosylase F	Transglycosylase, Slt family	Membrane-bound lytic murein transglycosylase F	Membrane-bound lytic murein transglycosylase F	Membrane-bound lytic murein transglycosylase F	Membrane-bound lytic murein transglycosylase F	Membrane-bound lytic murein transglycosylase F	Residues 47 to 518 of 518 are 99 pct identical to residues 1 to 472 of a 472 aa protein from Escherichia coli K12 ref: NP_417053.1 putative periplasmic binding transport protein	Membrane-bound lytic murein transglycosylase F	Putative periplasmic binding transport protein YfhD	IPR000189: Prokaryotic transglycosylase, active site; IPR001311: Solute-binding protein/glutamate receptor putative periplasmic amino acid binding protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Membrane-bound lytic murein transglycosylase F	transglycosylase amino-acid abc transporter binding protein	Similar to: HI0232, YFHD_HAEIN predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	Similar to Pseudomonas putida hypothetical protein SWALL:Q9X3V4 (EMBL:AF086638) (485 aa) fasta scores: E(): 1.8e-30, 30.67% id in 427 aa, and to Yersinia pestis putative membrane protein YPO2922 SWALL:Q8ZCQ1 (EMBL:AJ414154) (486 aa) fasta scores: E(): 8.8e-28, 30.82% id in 425 aa putative exported transglycosylase protein	ABC-type amino acid transport system, periplasmic component ArtI protein	Membrane-bound lytic murein transglycosylase F	
ECOLI02487	Uncharacterized protein yfhB	Hypothetical protein yfhB	Putative membrane protein	Putative uncharacterized protein yfhB	Residues 1 to 211 of 211 are 99 pct identical to residues 1 to 211 of a 211 aa protein YFHB_ECOLI sp: P30133 orf, conserved hypothetical protein	Putative membrane protein	putatative phosphoserine phosphatase	Putative membrane protein	Putatative phosphoserine phosphatase	Code: E; COG: COG0560 conserved hypothetical protein	Code: E; COG: COG0560 conserved hypothetical protein	conserved hypothetical protein	Code: E; COG: COG0560; orf conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Membrane protein	Putative membrane protein	Hypothetical protein	conserved hypothetical protein Code: E; COG: COG0560	Membrane protein	HAD superfamily (Subfamily IF) hydrolase, YfhB	Putative uncharacterized protein yfhB	Putative uncharacterized protein	HAD hydrolase YhfB	HAD superfamily (Subfamily IF) hydrolase, YfhB	Conserved protein	HAD hydrolase YfhB	HAD hydrolase YhfB	
ECOLI02488	Uncharacterized HTH-type transcriptional regulator yfhH	Transcriptional regulator, RpiR family	Transcriptional regulator, RpiR family	Putative transcriptional regulator	Hypothetical protein yfhH	Putative uncharacterized protein	Transcriptional regulator	Putative uncharacterized protein yfhH	Residues 1 to 306 of 306 are 99 pct identical to residues 1 to 306 of a 306 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289117.1 orf, conserved hypothetical protein	Putative RpiR-family transcriptional regulatory protein	putative ABC superfamily (membrane) transport protein	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Putative RpiR-family transcriptional regulatory protein	Putative ABC superfamily transport protein	Code: K; COG: COG1737 conserved hypothetical protein	similar to gi|57285381|gb|AAW37475.1| [Staphylococcus aureus subsp. aureus COL], percent identity 70 in 291 aa, BLASTP E(): e-115 putative transcriptional regulator	Putative transcriptional regulator with a sugarisomerase domain, RpiR family	Code: K; COG: COG1737 conserved hypothetical protein	transcriptional regulator, RpiR family	probable transcriptional regulator RpiR family	Transcriptional regulator, RpiR family COG1522 [K] Transcriptional regulators	Code: K; COG: COG1737; orf conserved hypothetical protein	Putative uncharacterized protein	Putative RpiR-family transcriptional regulatory protein	Transcriptional regulator, RpiR family	Putative uncharacterized protein yfhH	RpiR-family transcriptional regulatory protein	transcriptional regulator, RpiR family PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS) KEGG: mmc:Mmcs_0235 transcriptional regulator, RpiR family	Putative RpiR-family transcriptional regulatory protein	
ECOLI02489	Uncharacterized ferredoxin-like protein yfhL	Ferredoxin	Ferredoxin	Uncharacterized ferredoxin-like protein HI0527	Ferredoxin, 4Fe-4S bacterial type	Putative uncharacterized protein	Ferredoxin	Ferredoxin	Ferredoxin	Putative ferredoxin	Ferredoxin	putative ferredoxin	Putative ferredoxin-like protein yfhL	Ferredoxin	Ferredoxin	Ferredoxin	Ferredoxin, 4Fe-4S	Putative ferredoxin	Ferredoxin	Ferredoxin	Ferredoxin	FERREDOXIN	Ferredoxin	Ferredoxin	Ferredoxin	Putative uncharacterized protein yfhL	Ferredoxin	Ferredoxin	Residues 1 to 86 of 86 are 97 pct identical to residues 1 to 86 of a 86 aa protein from Escherichia coli K12 ref: NP_417057.1 orf, conserved hypothetical protein	
ECOLI02490	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	similar to GB:L06499, SP:P12751, PID:292439,  and PID:36134; identified by sequence similarity; putative holo-(acyl-carrier protein) synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	putative phosphopantetheinyl transferase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	Holo-[acyl-carrier-protein] synthase	identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556 holo-(acyl-carrier-protein) synthase	identified by match to TIGR protein family HMM TIGR00556 holo-(acyl-carrier-protein) synthase	Holo-[acyl-carrier-protein] synthase	
ECOLI02491	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxal phosphate biosynthetic protein pdxJ	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	putative pyridoxal phosphate biosyntheticprotein PdxJ	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	identified by match to PFAM protein family HMM PF03740 pyridoxal phosphate biosynthetic protein PdxJ, putative	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	Pyridoxine 5'-phosphate synthase	
ECOLI02492	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	putative DNA repair protein RecO	DNA repair protein recO	DNA repair protein recO	DNA repair protein RecO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	Residues 1 to 242 of 242 are 99 pct identical to residues 1 to 242 of a 242 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289122.1 protein interacts with RecR and possibly RecF proteins	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	conserved gene DNA repair protein RecO	DNA repair protein recO	DNA repair protein recO	DNA repair protein recO	
ECOLI02493	GTP-binding protein era	GTP-binding protein era homolog	GTP-binding protein Era	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	Putative GTP-binding protein	GTP-binding protein, Era/ThdF family	Putative GTP-binding protein Era/ThdF family	Widely conserved GTP-binding protein	GTP-binding protein era homolog	GTP-binding protein ERA homolog	GTP-binding protein ERA homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era homolog	GTP-binding protein era	GTP-binding protein era homolog	
ECOLI02494	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	identified by match to PFAM protein family HMM PF00636 ribonuclease III	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	
ECOLI02494	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	identified by match to PFAM protein family HMM PF00636 ribonuclease III	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	Ribonuclease 3	
ECOLI02495	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	putative signal peptidase I	Signal peptidase I	identified by match to PFAM protein family HMM PF00461 signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Signal peptidase I	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE SIGNAL PEPTIDASE I TRANSMEMBRANE PROTEIN	Signal peptidase I	
ECOLI02496	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	similar to GB:L22005, SP:P49427,  and PID:388309; identified by sequence similarity; putative GTP-binding protein LepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	GTP-binding protein lepA	
ECOLI02497	Sigma-E factor regulatory protein rseC	Putative uncharacterized protein	Positive regulator for alginate biosynthesis MucC	Sigma-E factor regulatory protein RseC	hypothetical protein	Sigma-E factor Regulatory protein rseC	Sigma-E factor regulatory protein RseC	Sigma-E factor regulatory protein	Sigma-E factor regulatory protein RseC	Sigma-E factor, negative regulatory protein	Residues 1 to 159 of 159 are 100 pct identical to residues 1 to 159 of a 159 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289128.1 sigma-E factor, negative regulatory protein	Sigma E factor regulatory protein	Sigma-E factor regulatory protein RseC	regulator of sigma E (sigma 24) factor	similar to Salmonella typhi CT18 sigma-E factor regulatory protein RseC sigma-E factor regulatory protein RseC	Sigma E factor regulatory protein	putative sigma-E factor regulatory protein	Similar to: HI0850, Y850_HAEIN predicted positive regulator of sigma E	Positive regulator of sigma E activity RseC protein	Regulator of sigma E (Sigma 24) factor	identified by similarity to SP:P46187; match to protein family HMM PF04246 sigma-E factor regulatory protein RseC	possible sigma-E factor regulatory protein	Positive regulator of sigma(E), RseC/MucC	negative regulatory protein; Code: T; COG: COG3086 sigma-E factor	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type f : factor putative regulator of sigma E (sigma 24) factor	negative regulatory protein; Code: T; COG: COG3086 sigma-E factor	putative positive regulator of sigma E activity	sigma-E factor regulator	sigma factor algU negative regulatory protein MucC Positive regulator of sigma E activity; COG3086	
ECOLI02498	Sigma-E factor regulatory protein rseB	RseB	Sigma factor algU regulatory protein mucB	Negative regulator of sigma E activity	Sigma-E factor regulatory protein RseB	Putative sigma E factor regulatory protein	putative sigma-E factor regulatory protein RseB	Sigma-E factor Regulatory protein rseB	Sigma-E factor regulatory protein RseB	Putative sigma factor regulatory protein	Putative sigma factor regulatory protein	Sigma-E factor regulatory protein RseB	Sigma-E factor regulatory protein	Sigma factor algU regulatory protein MucB	Putative sigma factor regulatory protein	Sigma factor algU regulatory protein MucB	Sigma-E factor regulatory protein RseB	Sigma-E factor regulatory protein rseB	Negative regulator of sigma E activity	Residues 1 to 318 of 318 are 100 pct identical to residues 1 to 318 of a 318 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289129.1 regulates activity of sigma-E factor	Sigma E factor regulatory protein	Putative sigma-e factor regulatory (Negative regulator) transcription regulator protein	Sigma-E factor regulatory protein RseB	Negative regulator for alginate biosynthesis MucB	anti sigma E (sigma 24) factor, negative regulator	similar to Salmonella typhi CT18 sigma-E factor regulatory protein RseB precursor sigma-E factor regulatory protein RseB precursor	Sigma E factor regulatory protein	Putative sigma-E factor regulatory protein	sigma-E factor regulatory protein RseB precursor	
ECOLI02499	Sigma-E factor negative regulatory protein	MclA	Negative regulator of sigma E activity	Sigma-E factor negative regulatory protein	putative sigma-E factor negative regulatory protein RseA	Sigma-E factor negative regulatory protein	Sigma-E factor negative regulatory protein RseA	Sigma-E factor negative regulatory protein	Sigma-E factor negative regulator	Sigma-E factor negative regulatory protein RseA	Sigma-E factor, negative regulatory protein	Negative regulator of sigma E activity	Residues 13 to 228 of 228 are 99 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli K12 ref: NP_417067.1 sigma-E factor, negative regulatory protein	Sigma E factor negative regulatory protein	Sigma-E factor negative regulatory protein	anti sigma E (sigma 24) factor, negative regulator	similar to Salmonella typhi CT18 sigma-E factor negative regulatory protein sigma-E factor negative regulatory protein	Sigma E factor negative regulatory protein	sigma-E factor negative regulatory protein	Similar to: HI0629, RSEA_HAEIN sigma-E factor negative regulatory protein homolog	Negative regulator of sigma E activity RseA protein	Negative regulator of sigma E activity	Anti sigma E (Sigma 24) factor, negative regulator	identified by similarity to SP:P38106; match to protein family HMM PF03872 sigma-E factor negative regulatory protein RseA	possible sigma-E factor negative regulatory protein	Code: T; COG: COG3073 sigma-E factor, negative regulatory protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 15137941; Product type f : factor putative anti sigma E (sigma 24) factor, negative regulator	negative regulatory protein; Code: T; COG: COG3073 sigma-E factor	sigma-E factor negative regulator	
ECOLI02500	RNA polymerase sigma-E factor	RNA polymerase ECF-type sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma-H factor	RNA polymerase sigma factor	ECF family sigma factor	RNA polymerase sigma-E factor	RNA polymerase sigma-70 factor, ECF family	RNA polymerase sigma factor	putative rpoE protein homolog	RNA polymerase sigma factor	RNA polymerase sigma-E factor	RNA polymerase sigma-E factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma-24 factor	RNA polymerase sigma factor	RNA polymerase ECF-type sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase ECF-type (group 3) sigma-E factor	RNA polymerase sigma-H factor	RNA polymerase sigma factor	Putative RNA polymerase sigma factor	RNA polymerase sigma-E factor	DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs	RNA polymerase sigma factor	
ECOLI02502	Uncharacterized protein yfiC	Putative RNA methyltransferase	Putative uncharacterized protein	Predicted O-methyltransferase	Putative uncharacterized protein STY2835	tRNA (adenine-N(6)-)-methyltransferase	hypothetical O-methyltransferase	Hypothetical protein yfiC	tRNA (adenine-N(6)-)-methyltransferase	Putative uncharacterized protein	tRNA (adenine-N(6)-)-methyltransferase	tRNA (adenine-N(6)-)-methyltransferase	tRNA (adenine-N(6)-)-methyltransferase	tRNA (adenine-N(6)-)-methyltransferase	tRNA (adenine-N(6)-)-methyltransferase	Residues 1 to 285 of 285 are 98 pct identical to residues 1 to 285 of a 285 aa protein from Escherichia coli K12 ref: NP_417070.1 putative enzyme	Putative uncharacterized protein	tRNA (adenine-N(6)-)-methyltransferase	IPR000051: SAM (and some other nucleotide) binding motif; IPR002052: N-6 Adenine-specific DNA methylase putative transferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	methyltransferase	Similar to: HI0423, YFIC_HAEIN predicted O-methyltransferase	Similar to Bacteroides thetaiotaomicron putative RNA methyltransferase BT0838 SWALL:AAO75945 (EMBL:AE016929) (241 aa) fasta scores: E(): 1e-59, 66.1% id in 239 aa, and to Escherichia coli hypothetical protein YfiC or B2575 SWALL:YFIC_ECOLI (SWALL:P31825) (245 aa) fasta scores: E(): 9.1e-32, 41.45% id in 234 aa conserved hypothetical protein	SAM-dependent methyltransferases SmtA protein	tRNA (adenine-N(6)-)-methyltransferase	identified by sequence similarity; putative; ORF located using Blastx; COG4123 putative DNA methylase	Code: R; COG: COG4123 putative enzyme	SAM-dependent methyltransferase	
ECOLI02501	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	Putative L-aspartate oxidase	L-aspartate oxidase	hypothetical L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	Aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	Probable L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	L-aspartate oxidase	Putative L-aspartate oxidase	putative l-aspartate oxidase	L-aspartate oxidase	
ECOLI02503	ATP-dependent RNA helicase srmB	SrmB	Probable ATP-dependent RNA helicase	DNA and RNA helicase	ATP-dependent RNA helicase SrmB	putative ATP-dependent RNA helicase SrmB	ATP-dependent RNA helicase srmB	ATP-dependent RNA helicase SrmB	ATP-dependent RNA helicase SrmB	ATP-dependent RNA helicase	ATP-dependent RNA helicase SrmB	ATP-dependent RNA helicase SrmB	ATP-dependent RNA helicase	Superfamily II DNA and RNA helicase	Residues 1 to 444 of 444 are 100 pct identical to residues 1 to 444 of a 444 aa protein from Escherichia coli O157:H7 ref: NP_311469.1 ATP-dependent RNA helicase	ATP-dependent RNA helicase	ATP-dependent RNA helicase	IPR000629: ATP-dependent helicase, DEAD-box; IPR001410: DEAD/DEAH box helicase ATP-dependent RNA helicase	similar to Salmonella typhi CT18 ATP-dependent RNA helicase SrmB ATP-dependent RNA helicase SrmB	ATP-dependent RNA helicase	ATP-dependent RNA helicase SrmB	Similar to: HI0422, SRMB_HAEIN ATP-dependent RNA helicase SrmB	Superfamily II DNA and RNA helicases SrmB protein	ATP-dependent RNA helicase, DEAD box family	ATP-dependent RNA helicase	ATP-dependent RNA helicase	identified by similarity to SP:P21507; match to protein family HMM PF00270; match to protein family HMM PF00271 ATP-dependent RNA helicase SrmB	ATP-dependent RNA helicase protein	identified by match to protein family HMM PF00270; match to protein family HMM PF00271 ATP-dependent RNA helicase SrmB	
ECOLI02504	Uncharacterized HTH-type transcriptional regulator yfiE	Hypothetical transcriptional regulator yfiE	Putative transcriptional regulator LYSR-type	Residues 1 to 306 of 308 are 96 pct identical to residues 1 to 306 of a 308 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289135.1 putative transcriptional regulator LYSR-type	Putative uncharacterized protein	IPR000847: Bacterial regulatory protein LysR, HTH motif putative transcriptional regulator, LysR family	similar to Salmonella typhimurium putative transcriptional regulator, LysR family putative transcriptional regulator, LysR family	hypothetical protein, similar to transcription regulator LysR family	Ortholog of S. aureus MRSA252 (BX571856) SAR0939 LysR family regulatory protein	hypothetical protein, similar to transcription regulator LysR family	Putative LysR family transcriptional regulator	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	transcriptional regulator, LysR family identified by match to protein family HMM PF00126; match to protein family HMM PF03466	Transcriptional regulator COG0583	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Hypothetical transcriptional regulator YfiE	Regulatory protein, LysR	conserved hypothetical protein	Hypothetical transcriptional regulator YfiE	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	putative transcriptional regulator YfiE	transcriptional regulator, LysR family	Putative uncharacterized protein	LysR-family transcriptional regulator	Putative transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	
ECOLI02505	Cysteine/O-acetylserine efflux protein	RhtB family transporter	Cysteine/O-acetylserine efflux protein	Transporter, LysE family	Transporter, LysE family	Transporter, LysE family	Putative membrane protein	Hypothetical protein yfiK	identified by match to protein family HMM PF01810 transporter, LysE family	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE AMINO ACID EFFLUX TRANSMEMBRANE PROTEIN	Putative membrane protein	LysE family protein	Cysteine/O-acetylserine efflux protein	hypothetical protein	Putative threonine efflux protein	Residues 1 to 195 of 195 are 98 pct identical to residues 1 to 195 of a 195 aa protein from Escherichia coli K12 ref: NP_417073.1 orf, conserved hypothetical protein	Putative exporter transmembrane protein	Amino acid efflux protein	Molecular Function: lysine permease activity (GO:0005293), Biological Process: amino acid transport (GO:0006865), Cellular Component: membrane (GO:0016020) Lysine exporter protein	IPR001123: Lysine exporter protein (LYSE/YGGA) paral putative transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Cysteine/O-acetylserine efflux protein	LysE family transporter	transporter, LysE family	Lysine exporter protein (LYSE/YGGA)	Code: E; COG: COG1280 conserved hypothetical protein	
ECOLI02506	Autonomous glycyl radical cofactor	Autonomous glycyl radical cofactor	Autonomous glycyl radical cofactor	Autonomous glycyl radical cofactor	putative formate acetyl transferase-related protein	Autonomous glycyl radical cofactor	Autonomous glycyl radical cofactor	Autonomous glycyl radical cofactor	Autonomous glycyl radical cofactor	Autonomous glycyl radical cofactor	Autonomous glycyl radical cofactor	Residues 7 to 133 of 133 are 99 pct identical to residues 1 to 127 of a 127 aa protein from Escherichia coli O157:H7 ref: NP_311472.1 putative formate acetyltransferase	Autonomous glycyl radical cofactor	IPR001150: Formate C-acetyltransferase glycine radical putative formate acetyltransferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Autonomous glycyl radical cofactor	formate acetyltransferase	Similar to: HI0017, YFID_HAEIN conserved hypothetical acid-induced glycyl radical enzyme	Acid-induced glycyl radical enzyme Hypothetical protein	Autonomous glycyl radical cofactor	Putative formate acetyltransferase	Code: R; COG: COG3445 putative formate acetyltransferase	Code: R; COG: COG3445 putative formate acetyltransferase	conserved hypothetical protein	Code: R; COG: COG3445 putative formate acetyltransferase	Autonomous glycyl radical cofactor	Hypothetical protein	Protein YfiD	Possible acid-induced glycyl radical protein	
ECOLI02507	Uracil-DNA glycosylase	Uracil-DNA glycosylase [Source:GeneDB_Spombe;Acc:SPCC1183.06]	some similarities with sp|P12887 Saccharomyces cerevisiae YML021c UNG1 uracil-DNA glycosylase singleton, hypothetical start	Uracil-DNA glycosylase	Uracil-DNA glycosylase	uracil-DNA glycosylase, putative	Uracil-DNA glycosylase	URACYL DNA GLYCOSYLASE;10_0530, URACYL DNA GLYCOSYLASE, UNG_HUMAN, gene found by Glimmer;	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	identified by match to PFAM protein family HMM PF03167 uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase 2	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Uracil-DNA glycosylase 2	Uracil-DNA glycosylase 2	Uracil-DNA glycosylase	
ECOLI02508	Uncharacterized tRNA/rRNA methyltransferase yfiF	Uncharacterized tRNA/rRNA methyltransferase HI0424	Possible tRNA/rRNA methyltransferase	tRNA/rRNA methyltransferase	Putative uncharacterized protein	Putative RNA methyltransferase	Hypothetical tRNA/rRNA methyltransferase yfiF	Putative uncharacterized protein	Putative tRNA/rRNA methyltransferase	Uncharacterized tRNA/rRNA methyltransferase yfiF	RNA methyltransferase, TrmH family	TRNA/rRNA methyltransferase protein	Residues 1 to 355 of 370 are 97 pct identical to residues 4 to 358 of a 445 aa protein from Escherichia coli dbj: BAA16467.1 orf, conserved hypothetical protein	Putative tRNA/rRNA methyltransferase	Similar to putative tRNA/rRNA methyltransferase YfiF Escherichia coli	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark tRNA/rRNA methyltransferase	IPR001537: tRNA/rRNA methyltransferase (SpoU) putative tRNA/rRNA methyltransferase	similar to Salmonella typhi CT18 putative RNA methyltransferase putative RNA methyltransferase	tRNA/rRNA methyltransferase	Putative tRNA/rRNA methyltransferase	conserved family - putative tRNA/rRNA methyltransferase hypothetical protein	RNA methyltransferase, TrmH family	rRNA methylases SpoU protein	Putative tRNA/rRNA methyltransferase	tRNA/rRNA methyltransferase	conserved putative tRNA/rRNA methyltransferase	Code: J; COG: COG0566 conserved hypothetical protein	Code: J; COG: COG0566 conserved hypothetical protein	conserved hypothetical protein	
ECOLI02509	Thioredoxin-2	Thioredoxin family protein, selenocysteine- containing	Thioredoxin	Thioredoxin-1	Putative thioredoxin	Thioredoxin	Thioredoxin related protein	hypothetical thioredoxin	Thiol-disulfide isomerase and thioredoxins	Thioredoxin	Thioredoxin 2	Thioredoxin	Lmo2830 protein	Thiol-disulfide isomerase and thioredoxins	putative thioredoxin 2	Thioredoxin 2	Thioredoxin 2	go_component: vacuole (sensu Fungi) [goid 0000324]; go_component: cytosol [goid 0005829]; go_function: thiol-disulfide exchange intermediate activity [goid 0030508]; go_process: vacuole inheritance [goid 0000011]; go_process: DNA-dependent DNA replication [goid 0006261]; go_process: response to oxidative stress [goid 0006979]; go_process: regulation of cell redox homeostasis [goid 0030503]; go_process: vacuole fusion, non-autophagic [goid 0042144] thioredoxin (trx), putative	Thioredoxin 2	Thioredoxin 2	Putative thioredoxin	Thioredoxin 2	Putative thioredoxin	Thioredoxin-2	CDS_ID OB0593 thioredoxin	Putative thioredoxin	Thioredoxin, selenocysteine-containing	Thioredoxin	Thioredoxin	
ECOLI02510	DTW domain-containing protein yfiP	Putative uncharacterized protein	Putative uncharacterized protein VV1720	Putative uncharacterized protein	Conserved hypothetical protein	Hypothetical protein yfiP	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1493	Putative uncharacterized protein yfiP	Putative uncharacterized protein	Residues 10 to 249 of 249 are 99 pct identical to residues 1 to 240 of a 240 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289142.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein yfiP	hypothetical cytosolic protein	Putative uncharacterized protein	Putative cytoplasmic protein	identified by match to protein family HMM PF03942 DTW domain protein	identified by match to protein family HMM PF03942 Uncharacterized conserved protein	identified by match to protein family HMM PF03942 DTW domain protein	DTW	Code: S; COG: COG3148 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3148 conserved hypothetical protein	DTW	
ECOLI02511	Uncharacterized protein yfiQ	Putative uncharacterized protein	Putative uncharacterized protein	Acyl-CoA synthetase	Putative acyl-CoA synthetase	Putative acetyl-CoA synthetase	putative acetyltransferase	Hypothetical protein yfiQ	Acetyltransferase, GNAT family	Putative uncharacterized protein	Acetyltransferase, GNAT family	Putative acyl-CoA synthetase	probable acetyl-CoA synthetase	Acetyltransferase, GNAT family	Putative acetyltransferase	Putative uncharacterized protein yfiQ	GCN5-related N-acetyltransferase:CoA Binding Domain	Histone acetyltransferase HPA2	Residues 1 to 886 of 886 are 99 pct identical to residues 1 to 886 of a 886 aa protein from Escherichia coli K12 ref: NP_417079.1 orf, conserved hypothetical protein	Putative acetyltransferase	Similar to putative acetyl-CoA synthetase YfiQ of Escherichia coli	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative acetyl-CoA synthetase	similar to Salmonella typhi CT18 putative acyl-CoA synthetase putative acyl-CoA synthetase	Putative uncharacterized protein	Putative acyl-CoA synthetase, NAD(P)-binding, ATP -binding	Hypothetical protein	acetyltransferase family acyl-CoA synthetase family	Putative acetyl-CoA synthetase	
ECOLI02512	CDP-diacylglycerol--serine O- phosphatidyltransferase	Phosphatidylglycerolphosphate synthase, catalyzes the synthesis of phosphatidylglycerolphosphate from CDP- diacylglycerol and sn-glycerol 3-phosphate in the first committed and rate-limiting step of cardiolipin biosynthesis. [Source:SGD;Acc:S000000510]	similar to sp|P25578 Saccharomyces cerevisiae YCL004w PEL1 phosphatidylglycerophosphate synthase singleton, start by similarity	CDP-diacylglycerol--serine O- phosphatidyltransferase	similar to uniprot|P25578 Saccharomyces cerevisiae YCL004w PEL1 phosphatidylglycerophosphate synthase;	DEHA2G11088p;similar to uniprot|P25578 Saccharomyces cerevisiae YCL004W PGS1 Phosphatidylglycerolphosphate synthase;	PssA	Phosphatidylserine synthase	CDP-diacylglycerol-serine O- phosphatidyltransferase	putative phosphatidylserine synthase	CDP-diacylglycerol--serine O- phosphatidyltransferase	CDP-diacylglycerol--serine O- phosphatidyltransferase	CDP-diacylglycerol--serine O- phosphatidyltransferase	CDP-diacylglycerol--serine O- phosphatidyltransferase	CDP-diacylglycerol--serine O- phosphatidyltransferase	Phosphatidylserine synthase	Phosphatidylserine synthase; phospholipid synthesis	Phosphatidylserine/phosphatidylglycerophosphate, cardiolipin synthase	Residues 1 to 452 of 452 are 99 pct identical to residues 7 to 458 of a 458 aa protein from Escherichia coli dbj: BAA16470.1 CDP-diacylglycerol--serine O-phosphatidyltransferase (phosphatidylserine synthase)	CDP-diacylglycerol--serine O- phosphatidyltransferase	PssA protein	CDP-diacylglycerol--serine O- phosphatidyltransferase	CDPdiacylglycerol-serine O- phosphatidyltransferase	Phosphatidylserine synthase	IPR001736: Phospholipase D/Transphosphatidylase phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase)	similar to Salmonella typhi CT18 CDP-diacylglycerol-serine O-phosphatidyltransferase CDP-diacylglycerol-serine O-phosphatidyltransferase	CDP-diacylglycerol-serine O- phosphatidyltransferase	CDP-diacylglycerol--serine O-phosphatidyltransferase	
ECOLI02514	Alpha-ketoglutarate permease	Alpha-ketoglutarate permease	Alpha-ketoglutarate permease	Putative ABC transport system, permease protein	Alpha-ketoglutarate permease	identified by match to PFAM protein family HMM PF03845 metabolite-proton symporter	Alpha-ketoglutarate permease	Dicarboxylic acid transport protein	Alpha-ketoglutarate permease	ALPHA-KETOGLUTARATE PERMEASE	Alpha-ketoglutarate permease	SC6G3.06c, probable transmembrane transport protein, len: 426 aa; similar to many transporters e.g.  SW:KGTP_ECOLI (EMBL:X53027), kgtP, Escherichia coli alpha-ketoglutarate permease (432 aa), fasta scores; opt: 1088 z-score: 1249.1 E(): 0, 41.1% identity in 419 aa overlap. Highly similar to TR:Q03095 (EMBL:M64783) Streptomyces hygroscopicus putative bialaphos transport protein (447 aa) (57.3% identity in 412 aa overlap).  Similar to TR:O86563 (EMBL:AL031184) S.coelicolor probable transmembrane transport protein (472 aa) (31.7% identity in 436 aa overlap). Contains hydrophobic, possible membrane-spanning regions. Contains Pfam match to PF00083 sugar_tr, Sugar (and other) transporter, PS00216 Sugar transport proteins signature 1 and PS00217 Sugar transport proteins signature 2 putative transmembrane transport protein	Alpha-ketoglutarate permease	Residues 35 to 466 of 466 are 100 pct identical to residues 1 to 432 of a 432 aa protein from Escherichia coli K12 ref: NP_417082.1 alpha-ketoglutarate permease	Putative alpha-ketoglutarate permease transmembrane protein	identified by similarity to SP:P17448; match to protein family HMM PF00083 alpha-ketoglutarate permease	IPR005829: Sugar transporter superfamily; IPR007114: Major facilitator superfamily MFS family, alpha-ketoglutarate permease	similar to Salmonella typhi CT18 alpha-ketoglutarate permease alpha-ketoglutarate permease	similar to BR1453, metabolite-proton symporter metabolite-proton symporter	Alpha-ketoglutarate permease	ALPHA-KETOGLUTARATE PERMEASE	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter dicarboxylic acid transport protein; alpha-ketoglutarate permease (MFS superfamily)	Dicarboxylate MFS transporter	MFS family alpha-ketoglutarate permease	identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00883 dicarboxylic acid transport protein	identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00883 dicarboxylic acid transport protein	Citrate-proton symport	Citrate-proton symport	Code: GEPR; COG: COG0477 alpha-ketoglutarate permease	
ECOLI02513	Uncharacterized protein yfiM	Putative uncharacterized protein STY2846	Hypothetical protein yfiM	Putative uncharacterized protein	Putative uncharacterized protein yfiM	Residues 25 to 114 of 114 are 97 pct identical to residues 1 to 90 of a 90 aa protein from Escherichia coli K12 ref: NP_417081.1 orf, conserved hypothetical protein	Putative lipoprotein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative lipoprotein	Putative outer membrane lipoprotein	Code: R; COG: COG5544 conserved hypothetical protein	Code: R; COG: COG5544 conserved hypothetical protein	predicted periplasmic lipoprotein COG5544	Code: R; COG: COG5544; orf conserved hypothetical protein	Putative uncharacterized protein	Putative lipoprotein precursor	Putative uncharacterized protein yfiM	Lipoprotein precursor	Putative exported protein	putative outer membrane lipoprotein	conserved hypothetical protein Code: R; COG: COG5544	Lipoprotein precursor	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfiM	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	




ECOLI02515	Chaperone protein clpB	Oligomeric mitochondrial matrix chaperone that cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; able to prevent the aggregation of misfolded proteins as well as resolubilize protein aggregates. [Source:SGD;Acc:S000002666]	Chaperone protein clpB	Heat shock protein 78, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC4F6.17c]	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	HSP 101 RELATED PROTEIN;11_1420, HSP 101 RELATED PROTEIN, BELONGS TO THE CLPB PROTEASE FAMILY (induced by heat shock), CLPB_HAEIN, H101_ARATH, gene found by Glimmer;	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	highly similar to uniprot|Q12137 Saccharomyces cerevisiae YDR258c heat shock protein of clpb family of ATP-dependent proteases;	DEHA2E20834p;highly similar to uniprot|P33416 Saccharomyces cerevisiae YDR258C HSP78 Oligomeric mitochondrial matrix chaperone that cooperates with Ssc1p in mitochondrial thermotolerance after heat shock;	Chaperone protein clpB 1	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Chaperone protein clpB	Endopeptidase Clp ATP-binding chain B	ClpB heat-shock protein	
ECOLI02516	UPF0124 protein yfiH	Putative uncharacterized protein	UPF0124 protein PD_1754	Putative uncharacterized protein	UPF0124 protein HI0175	similar to GB:M16753,  and PID:143529; identified by sequence similarity; putative hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	UPF0124 protein aq_167	Putative uncharacterized protein	UPF0124 protein RC0672	Putative uncharacterized protein	Putative uncharacterized protein	UPF0124 protein PA4543	UPF0124 protein Cj1217c	Putative uncharacterized protein VV0714	UPF0124 protein DR_1966	Putative uncharacterized protein	Hypothetical cytosolic protein	Putative uncharacterized protein	Putative uncharacterized protein STY2850	All5255 protein	Putative uncharacterized protein	Putative uncharacterized protein	UPF0124 protein Cgl2154/cg2365	UPF0124 protein ML0918	Putative uncharacterized protein	Hypothetical Cytosolic Protein	
ECOLI02517	Ribosomal large subunit pseudouridine synthase D	Pseudouridine synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase D	Uncharacterized RNA pseudouridine synthase slr1629	Ribosomal large subunit pseudouridine synthase D	Uncharacterized RNA pseudouridine synthase MG209	Ribosomal large subunit pseudouridine synthase D	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Putative uncharacterized protein	Uncharacterized RNA pseudouridine synthase aq_1758	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase D	Ribosomal large subunit pseudouridine synthase D	Ribosomal large subunit pseudouridine synthase D	Pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase D	Pseudouridine synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase D	Alr0522 protein	Pseudouridine synthase	
ECOLI02518	UPF0169 lipoprotein yfiO	Lipoprotein, putative	UPF0169 lipoprotein PD_1756	Competence lipoprotein	Putative UPF0169 lipoprotein HI0177	UPF0169 lipoprotein CC_1984	Putative uncharacterized protein	Competence lipoprotein comL	UPF0169 lipoprotein PM1720	UPF0169 lipoprotein PA4545	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Competence lipoprotein ComL, putative	conserved hypothetical protein	Competence protein ComL	UPF0169 lipoprotein yfiO precursor	similar to GB:X77722, PID:1147572, PID:488364, PID:994725, PID:994726, PID:995295, and PID:995297; identified by sequence similarity; putative competence protein ComL, putative	Competence protein, putative	UPF0169 lipoprotein VC_0708	Probable lipoprotein	Competence lipoprotein	Competence lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	UPF0169 protein BUsg_389	
ECOLI02519	Ribosome-associated inhibitor A	Putative uncharacterized protein	Putative sigma-54 modulation protein	Putative sigma(54) modulation protein	Probable Sigma (54) modulation protein , SSU ribosomal protein S30P	Ribosomal subunit interface protein	hypothetical sigma-54 modulation protein	Ribosome-associated inhibitor A	identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741 ribosomal subunit interface protein	Sigma-54 modulation protein, putative	Ribosomal subunit interface protein	Putative sigma(54) modulation protein	ribosomal protein S30EA	Putative sigma-54 modulation protein	Ribosome-associated inhibitor A	Ribosome-associated protein Y	Ribosome-associated protein Y	Residues 1 to 113 of 113 are 100 pct identical to residues 1 to 113 of a 113 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289151.1 putative yhbH sigma 54 modulator	Putative sigma 54 modulation protein	Similar to probable sigma-54 modulation protein YfiA of Escherichia coli	IPR003489: Sigma 54 modulation protein/ribosomal protein S30EA ribosome associated factor, stabilizes ribosomes against dissociation	similar to Salmonella typhi CT18 putative sigma(54) modulation protein putative sigma(54) modulation protein	Putative sigma 54 modulation protein	ribosome-associated factor Y	Similar to: HI0257, YFIA_HAEIN conserved hypothetical protein	Ribosome-associated protein Y (PSrp-1) Hypothetical protein	Ribosome associated factor	conserved hypothetical protein	Code: J; COG: COG1544 putative yhbH sigma 54 modulator	
ECOLI02521	P-protein	conserved hypothetical protein;	Prephenate dehydratase, catalyzes the conversion of prephanate to phenylpyruvate, which is a step in the phenylalanine biosynthesis pathway.  [Source:SGD;Acc:S000005260]	Prephenate dehydratase	Putative prephenate dehydratase [Source:GeneDB_Spombe;Acc:SPBC30D10.16]	similar to sp|P32452 Saccharomyces cerevisiae YNL316c PHA2 prephenate dehydratase singleton, start by similarity	Prephenate dehydratase	Chorismate mutase	Chorismate mutase/prephenate dehydratase	Probable chorismate mutase (CM)/prephenate dehydratase	Chorismate mutase/prephenate dehydratase	Chorismate mutase /prephenate dehydratase	P-protein	Prephenate dehydratase	Prephenate dehydratase	Probable chorismate mutase (CM); prephenate dehydratase	P-protein	Chorismate mutase-Prephenate dehydratase	Prephenate dehydratase	Prephenate dehydratase	Prephenate dehydratase	Chorismate mutase/prephenate dehydratase	PheA	Chorismate mutase/prephenate dehydratase	Prephenate dehydratase	Chorismate mutase/prephenate dehydratase	Prephenate dehydratase	Chorismate mutase-P	Prephenate dehydratase	
ECOLI02522	T-protein	Chorismate mutase/prephenate dehydrogenase	T-protein	hypothetical protein	TyrA	Prephenate dehydrogenase	Chorismate mutase	Chorismate mutase/prephenate dehydrogenase	putative chorismate mutase/prephenate dehydrogenase	T-protein	Prephenate dehydrogenase	Chorismate mutase/prephenate dehydrogenase	Chorismate mutase/prephenate dehydrogenase	T-protein	Chorismate mutase/prephenate dehydrogenase	Chorismate mutase-T and prephenate dehydrogenase	Prephenate dehydrogenase	Residues 1 to 373 of 373 are 99 pct identical to residues 1 to 373 of a 373 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289153.1 chorismate mutase-T and prephenate dehydrogenase	T-protein	T-protein	Chorismate mutase/prephenate dehydrogenase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark chorismate mutase; prephenate dehydrogenase	bifunctional chorismate mutase T/prephenate dehydrogenase	similar to Salmonella typhi CT18 chorismate mutase/prephenate dehydrogenase chorismate mutase/prephenate dehydrogenase	Chorismate mutase	Bifunctional: chorismate mutase T and prephenate dehydrogenase	chorismate mutase/prephenate dehydrogenase	prephenate dehydrogenase chorismate mutase	CM; PDH; Similar to: HI1290, TYRA_HAEIN T-protein	
ECOLI02523	Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase	Phospho-2-keto-3-deoxyheptonate aldolase	AroF	Phospho-2-dehydro-3-deoxyheptonate aldolase	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	Phospho-2-dehydro-3-deoxyheptonate aldolase	Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase	putative phospho-2-dehydro-3-deoxyheptonatealdolase, tyr-sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, tyr- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, tyr- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr- sensitive	Phospho-2-dehydro-3-deoxyheptonate aldolase	Phospho-2-dehydro-3-deoxyheptonate aldolase, tyr- sensitive	3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase	Residues 1 to 356 of 356 are 99 pct identical to residues 1 to 356 of a 356 aa protein from Escherichia coli K12 ref: NP_417092.1 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible)	Phospho-2-dehydro-3-deoxyheptonate aldolase,tyr- sensitive	AroF protein	Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr- sensitive	phospho-2-dehydro-3-deoxyheptonate aldolase	conserved gene 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	phospho-2-dehydro-3-deoxyheptonate aldolase	2-dehydro-3-deoxy-phosphoheptonate aldolase	Phospho-2-dehydro-3-deoxyheptonate aldolase, tyr- sensitive	IPR006219: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 1 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase), tyrosine repressible	similar to Salmonella typhi CT18 phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive	
ECOLI02524	Uncharacterized protein yfiL	Hypothetical protein yfiL	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP0541	Putative uncharacterized protein yfiL	Putative uncharacterized protein	Residues 1 to 127 of 127 are 99 pct identical to residues 8 to 134 of a 134 aa protein from Escherichia coli K12 ref: NP_417093.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yfiL	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative lipoprotein	Predicted protein	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein yfiL	Putative uncharacterized protein	
ECOLI02525	Uncharacterized protein yfiR	Putative exported protein	Hypothetical protein yfiR	Uncharacterized protein yfiR	Residues 1 to 172 of 172 are 99 pct identical to residues 1 to 172 of a 172 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289156.1 orf, conserved hypothetical protein	Putative membrane protein	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative membrane protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	Putative uncharacterized protein	Putative periplasmic protein	conserved hypothetical protein	hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative membrane protein precursor	hypothetical protein	Putative uncharacterized protein yfiR	Membrane protein precursor	conserved hypothetical protein	Putative membrane protein precursor	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein Evidence 4 : Homologs of previously reported genes of unknown function	Hypothetical protein	
ECOLI02526	Inner membrane protein yfiN	Putative membrane protein	Hypothetical protein yfiN	Putative uncharacterized protein yfiN	Putative exported protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative exported protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative membrane protein	GGDEF domain protein	Putative diguanylate cyclase/phosphodiesterase	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 GGDEF domain protein	identified by match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM TIGR00254 GGDEF domain protein	GGDEF	Code: T; COG: COG2199 conserved hypothetical protein	conserved hypothetical protein	Putative diguanylate cyclase (GGDEF domain)	diguanylate cyclase (GGDEF domain)	Code: T; COG: COG2199; orf conserved hypothetical protein	Diguanylate cyclase precursor	Putative uncharacterized protein	Hypothetical protein precursor	diguanylate cyclase (GGDEF domain)	Putative uncharacterized protein yfiN	diguanylate cyclase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein KEGG: bur:Bcep18194_B0644 diguanylate cyclase (GGDEF domain)	Hypothetical protein precursor	diguanylate cyclase TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein KEGG: bcn:Bcen_3340 diguanylate cyclase	inner membrane protein YfiN identified by match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM TIGR00254	Putative exported protein precursor	GGDEF domain protein	
ECOLI02527	Putative lipoprotein yfiB	Probable outer membrane protein	Putative lipoprotein yfiB	Putative outer membrane protein	Residues 1 to 160 of 160 are 98 pct identical to residues 1 to 160 of a 160 aa protein from Escherichia coli K12 ref: NP_417096.1 putative outer membrane protein	Putative lipoprotein	Membrane-associated protein map18	Putative OmpA/OmpF family outer membrane porin	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pm : putative membrane component putative lipoprotein precursor	OmpA family protein	identified by match to protein family HMM PF00691 OmpA family protein	OmpA/MotB	Code: M; COG: COG2885 putative outer membrane protein	Code: M; COG: COG2885 putative outer membrane protein	OmpA/MotB	outer membrane protein, OmpA/MotB family	Code: M; COG: COG2885 putative outer membrane protein	OmpA/MotB	Putative lipoprotein YfiB	Putative lipoprotein precursor	OmpA/MotB	Putative lipoprotein YfiB	OmpA/MotB domain protein PFAM: OmpA/MotB domain protein KEGG: bur:Bcep18194_B0645 outer membrane protein, OmpA/MotB family	Lipoprotein precursor	OmpA/MotB domain protein PFAM: OmpA/MotB domain protein KEGG: bcn:Bcen_3341 OmpA/MotB	OmpA family protein identified by match to protein family HMM PF00691	Putative lipoprotein	OmpA family protein	probable outer membrane protein precursor	
ECOLI02528	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	similar to GB:X61070,  and PID:33509; identified by sequence similarity; putative ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	50S ribosomal protein L19	
ECOLI02529	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	similar to GB:M27377, GB:U32525,  and PID:639897; identified by sequence similarity; putative tRNA (guanine-N1)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N(1)-)-methyltransferase	
ECOLI02530	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	16S rRNA-processing protein rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Probable 16S rRNA-processing protein rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	Ribosome maturation factor rimM	putative 16S rRNA processing protein RimM	16S rRNA-processing protein rimM	Ribosome maturation factor rimM	
ECOLI02531	30S ribosomal protein S16	similar to sp|Q02608 Saccharomyces cerevisiae YPL013c, hypothetical start	30S ribosomal protein S16	Probable 40S ribosomal protein S16, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC354.06]	similar to sp|Q02608 Saccharomyces cerevisiae YPL013c singleton, start by similarity	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	similar to uniprot|Q02608 Saccharomyces cerevisiae YPL013c;	identified by match to TIGR protein family HMM TIGR00002 ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	30S ribosomal protein S16	
ECOLI02532	Signal recognition particle protein	Signal recognition particle, subunit FFH/SRP54	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	similar to GB:M82827, GB:X56058, SP:P29590, SP:P29591, SP:P29592, SP:P29593, SP:Q00755,  and PID:182796; identified by sequence similarity; putative signal recognition particle	Putative signal recognition protein	Signal recognition particle protein	Putative signal recognition particle, subunit SRP54	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	hypothetical signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle protein	Ffh	Signal recognition particle protein Ffh	Signal recognition particle protein	Signal recognition particle protein	Signal recognition particle GTPase	Signal recognition particle protein	
ECOLI02533	Inner membrane protein ypjD	Putative uncharacterized protein	CcsA-related protein	Putative uncharacterized protein	Putative uncharacterized protein	ABC-type uncharacterized transport system, permease component	Putative membrane protein	conserved hypothetical protein	Inner membrane protein ypjD	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Membrane protein, putative	Putative membrane protein	Membrane protein, putative	Putative cytochrome c biogenesis protein	Putative uncharacterized protein VP2535	Inner membrane protein ypjD	ABC-type uncharacterized transport system, permease component	Residues 1 to 288 of 288 are 99 pct identical to residues 1 to 288 of a 288 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289164.1 orf, conserved hypothetical protein	Putative membrane protein	Putative transmembrane protein	Similar to putative membrane protein YpjD of Escherichia coli	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative cytochrome c-type biogenesis protein (heme exporter protein C	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Putative membrane protein	
ECOLI02534	UPF0053 inner membrane protein yfjD	UPF0053 protein HI0107	Putative transport protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative hemolysin	Putative membrane protein	putative Mg2+ and Co2+ transporter CorB	Hemolysin	Hypothetical protein	CBS domain protein	Hemolysin, putative	Hemolysin protein, putative	Conserved protein, putative hemolysin	Putative hemolysin	Magnesium and cobalt efflux protein	Putative Mg2+ and Co2+ transporter CorB	Residues 1 to 399 of 399 are 99 pct identical to residues 15 to 413 of a 413 aa protein from Escherichia coli dbj: BAA16497.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Similar to putative membrane protein YfjD of Escherichia coli	identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471 CBS domain protein	IPR000644: CBS domain putative membrane protein	similar to Salmonella typhi Ty2 putative membrane protein putative membrane protein	Possible CorC/HlyC family of putative transporters	magnesium and cobalt efflux protein CorB	Similar to: HI0107, YFJD_HAEIN putative Mg2+ and Co2+ transporter	Uncharacterized CBS domain-containing proteins Hypothetical protein	CBS domain protein	
ECOLI02535	Protein grpE	conserved hypothetical protein;	Protein of the mitochondrial matrix involved in protein import into mitochondria; acts as a cochaperone and a nucleotide release factor for Ssc1p; homolog of E. coli GrpE. [Source:SGD;Acc:S000005758]	similar to sp|P38523 Saccharomyces cerevisiae YOR232w MGE1 heat shock protein - chaperone, start by similarity	Protein grpE	some similarities with sp|P38523 Saccharomyces cerevisiae YOR232w MGE1 heat shock protein - chaperone singleton, hypothetical start	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	highly similar to uniprot|P38523 Saccharomyces cerevisiae YOR232w MGE1 heat shock protein;	GrpE protein	DEHA2C16830p;similar to uniprot|P38523 Saccharomyces cerevisiae YOR232w MGE1 Protein of the mitochondrial matrix involved in protein import into mitochondria;	similar to GB:U18550, SP:P46089, PID:1061126, PID:577417, PID:602312,  and PID:604504; identified by sequence similarity; putative grpE protein	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	Protein grpE	
ECOLI02536	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Putative uncharacterized protein	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase 2	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	Probable inorganic polyphosphate/ATP-NAD kinase	
ECOLI02537	DNA repair protein recN	DNA repair protein recN	DNA repair protein RecN	DNA repair protein recN	DNA repair protein recN	Recombination protein N	DNA repair protein recN	DNA repair protein recN	Recombination/replication protein RecN	Putative DNA recombination and repair protein	DNA repair protein RecN	DNA repair protein recN	Putative DNA repair protein	DNA REPAIR PROTEIN RECN, ABC transporter	DNA repair and genetic recombination protein	DNA repair protein RecN	DNA repair protein RecN	DNA repair protein recN	DNA repair protein RecN	RecN	DNA repair protein RecN	DNA repair protein recN	DNA repair protein RecN	DNA repair protein recN	DNA repair protein RecN	Putative DNA repair and genetic recombination protein	DNA repair protein RecN	DNA repair protein	DNA repair protein	
ECOLI02538	Small protein A	Putative uncharacterized protein	Small protein A	Small protein A	hypothetical small protein A	Small protein A precursor	Small protein A homolog	Putative outer membrane lipopotein	Small protein A	Outer membrane lipoprotein	Small protein A	Residues 1 to 113 of 113 are 100 pct identical to residues 1 to 113 of a 113 aa protein SMPA_ECOLI sp: P23089 Small protein A precursor	Putative uncharacterized protein	Small protein A	Outer membrane lipoprotein OmlA	IPR001993: Mitochondrial substrate carrier; IPR002048: Calcium-binding EF-hand; IPR007450: SmpA/OmlA small membrane protein A	similar to Salmonella typhi CT18 small protein A small protein A	Conserved hypothetical small protein A	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter outer membrane lipoprotein	small protein A	Similar to: HI0838, SMPA_HAEIN small protein A	Small protein A (tmRNA-binding) SmpA protein	Outer membrane lipoprotein OmlA (small protein A)	Small membrane protein A	small protein A	ortholog to Escherichia coli bnum: b2617; MultiFun: Cell structure 6.1 small membrane protein A	SmpA/OmlA	Code: J; COG: COG2913 small membrane protein A	Evidence 4 : Homologs of previously reported genes of unknown function; Product type m : membrane component conserved protein of unknown function ; putative small protein A [Precursor] (smpA)	
ECOLI02539	UPF0125 protein yfjF	UPF0125 protein HI0395	UPF0125 protein NMB0796	UPF0125 protein PM0166	UPF0125 protein PA4766	UPF0125 protein VV0820	UPF0125 protein yfjF	Putative uncharacterized protein	conserved hypothetical protein	UPF0125 protein yfjF	UPF0125 protein VC_0850	Putative uncharacterized protein	Putative uncharacterized protein	UPF0125 protein SO_1475	Putative uncharacterized protein	UPF0125 protein BUsg_244	UPF0125 protein PSPTO_4512	Putative uncharacterized protein	TGS domain protein	UPF0125 protein VP0646	UPF0125 protein yfjF	UPF0125 protein CBU_1303	UPF0125 protein BU253	UPF0125 protein VV1_0369	Residues 1 to 102 of 102 are 98 pct identical to residues 1 to 102 of a 102 aa protein from Escherichia coli K12 ref: NP_417108.1 orf, conserved hypothetical protein	UPF0125 protein YPO1103/y3077/YP_1053	Putative uncharacterized protein	UPF0125 protein RSc1426	UPF0125 protein plu3376	
ECOLI02540	UPF0083 protein yfjG	Blr4478 protein	Coenzyme Q-binding protein coq10, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC16A11.07]	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	UPF0083 protein PA4767	Putative uncharacterized protein VV0819	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Aromatic-rich protein family	conserved hypothetical protein	Hypothetical protein yfjG	identified by match to PFAM protein family HMM PF03654 conserved hypothetical protein	UPF0083 protein VC_0849	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical Cytosolic Protein	
ECOLI02541	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	similar to SP:P04034; identified by sequence similarity; putative small protein B	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	SsrA-binding protein	

ECOLI02542	Prophage CP4-57 integrase	Phage integrase family	Phage integrase	Prophage integrase	Phage integrase	Residues 1 to 413 of 413 are 83 pct identical to residues 1 to 413 of a 413 aa protein from Escherichia coli K12 ref: NP_417111.1 prophage CP4-57 integrase	Putative prophage integrase	Similar to: INTA_ECOLI prophage CP4-57-like integrase	Integrase	Fels-2 prophage protein	Putative prophage integrase	Integrase	Prophage integrase	Putative prophage integrase	prophage CP4-57 integrase Code: L; COG: COG0582	Prophage integrase	Phage integrase family protein	Prophage integrase	Phage integrase family protein	PFAM: integrase family protein KEGG: vvy:VV0817 phage integrase integrase family protein	Putative phage integrase	Putative integrase	Putative uncharacterized protein	Phage integrase family protein	Phage integrase family protein	Integrase family protein	Putative uncharacterized protein	Prophage CP4-57-like integrase	Putative uncharacterized protein	
ECOLI02543	Uncharacterized protein yfjH	CP4-57 prophage; predicted protein	
ECOLI02544	Prophage CP4-57 regulatory protein alpA	Prophage CP4-57 Regulatory protein alpA	Transcriptional regulator	Putative prophage regulatory protein	Phage-related protein	phage-related protein	Phage transcriptional regulator, AlpA	hypothetical protein COG3311 Predicted transcriptional regulator	Hypothetical protein	phage transcriptional regulator, AlpA PFAM: Prophage CP4-57 regulatory KEGG: xac:XAC2204 prophage regulatory protein	Prophage regulatory protein	regulatory protein, AlpA family	Phage transcriptional regulator, AlpA	Putative prophage regulator protein	Prophage cp4-57 regulatory protein AlpA	Prophage CP4-57 regulatory protein alpA	Phage transcriptional regulator, AlpA	Phage transcriptional regulator, AlpA	Phage transcriptional regulator, AlpA	Putative uncharacterized protein	Putative transcriptional regulator	Phage-related regulatory protein	CP4-57 prophage; DNA-binding transcriptional activator	Phage transcriptional regulator, AlpA	Phage transcriptional regulator, AlpA	Phage transcriptional regulator, AlpA	Phage transcriptional regulator, AlpA	Putative prophage regulatory protein	Phage transcriptional regulator, AlpA	
ECOLI02545	Uncharacterized protein yfjI	Putative uncharacterized protein	Hypothetical Membrane Spanning Protein	Putative uncharacterized protein	hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	conserved hypothetical protein KEGG: pfo:Pfl_0744 hypothetical protein	Hypothetical protein	conserved hypothetical protein KEGG: son:SO1442 hypothetical protein	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Uncharacterized conserved protein	Hypothetical membrane-spanning protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein	CP4-57 prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02546	Uncharacterized protein yfjJ	CP4-57 prophage; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	CP4-57 prophage; predicted protein	
ECOLI02547	Uncharacterized protein yfjK	Hypothetical protein	helicase domain protein PFAM: helicase domain protein KEGG: dde:Dde_0781 helicase-like	DEAD/DEAH box helicase domain protein	CP4-57 prophage; conserved protein	Putative uncharacterized protein	Helicase conserved C-terminal domain protein	Putative helicase	Superfamily II helicase	Helicase domain protein	Superfamily II helicase	CP4-57 prophage; conserved protein	
ECOLI02548	Uncharacterized protein yfjL	CP4-57 prophage; predicted protein	Putative uncharacterized protein	YfjL	Putative uncharacterized protein	CP4-57 prophage; predicted protein	
ECOLI02550	Uncharacterized protein yfjN	pseudo	KEGG: ecj:JW2611 hypothetical protein conserved hypothetical protein	CP4-57 prophage; RNase LS	CP4-57 prophage; RNase LS	
ECOLI02551	Uncharacterized protein yfjO	CP4-57 prophage; predicted protein	CP4-57 prophage; predicted protein	
ECOLI02552	Uncharacterized protein yfjP	CP4-57 prophage; predicted GTP-binding protein	CP4-57 prophage; predicted GTP-binding protein	
ECOLI02553	UPF0380 protein yfjQ	Putative uncharacterized protein	Residues 1 to 272 of 272 are 94 pct identical to residues 1 to 273 of a 273 aa protein from Escherichia coli O157:H7 ref: NP_310828.1 orf, conserved hypothetical protein	CP4-57 prophage; predicted protein	Putative uncharacterized protein	Predicted protein	CP4-57 prophage; predicted protein	Putative uncharacterized protein	
ECOLI02554	Uncharacterized HTH-type transcriptional regulator yfjR	identified by similarity to SP:P52133 transcriptional regulator, putative	transcriptional regulator-like	Putative uncharacterized protein	Helix-turn-helix, type 11 domain protein	Helix-turn-helix, type 11 domain protein PFAM: Helix-turn-helix, type 11 domain protein KEGG: cjr:CJE0674 transcriptional regulator, putative	Transcriptional regulator	Putative transcriptional regulator	Putative uncharacterized protein	CP4-57 prophage; predicted DNA-binding transcriptional regulator	Transcriptional regulator	Transcriptional regulator precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative transcriptional regulator	Putative DNA-binding protein	Hypothetical phage protein	Putative HTH-type transcriptional regulator	Transcriptional regulator-like protein, helix- turn-helix domain-containing protein	Putative uncharacterized protein yfjR	Regulatory protein DeoR	CP4-57 prophage; predicted DNA-binding transcriptional regulator	predicted transcription repressor Integrative element ECO103_IE06	

ECOLI02556	Uncharacterized lipoprotein yfjS	CP4-57 prophage; predicted protein	
ECOLI02557	Uncharacterized protein yfjT	CP4-57 prophage; predicted protein	CP4-57 prophage; predicted protein	



ECOLI02560	Uncharacterized protein yfjW	CP4-57 prophage; predicted inner membrane protein	
ECOLI02562	Uncharacterized protein yfjX	CP4-57 prophage; predicted antirestriction protein	Antirestriction protein	Hypothetical phage protein	CP4-57 prophage; predicted antirestriction protein	
ECOLI02563	Putative radC-like protein yfjY	DNA repair protein RadC identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608	conserved hypothetical protein	DNA repair protein RadC	DNA repair protein RadC	CP4-57 prophage; predicted DNA repair protein	DNA repair protein, RadC family	DNA repair protein radC-like protein	DNA repair protein RadC	Hypothetical phage protein	CP4-57 prophage; predicted DNA repair protein	

ECOLI02565	Uncharacterized protein yfjZ	CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin -antitoxin system	Putative uncharacterized protein	Hypothetical phage protein	CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin -antitoxin system	
ECOLI02566	Uncharacterized protein ypjF	CP4-57 prophage; toxin of the YpjF-YfjZ toxin- antitoxin system	CP4-57 prophage; toxin of the YpjF-YfjZ toxin- antitoxin system	
ECOLI02567	Uncharacterized outer membrane protein ypjA	some similarities with sp|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase, hypothetical start	Surface protein	no similarity,;	Putative uncharacterized protein	Putative uncharacterized protein	Outer membrane protein B	Autotransporter	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL PROTEIN	Putative ATP-binding component of a transport system	serine proteinase	Outer membrane protein B	hypothetical protein	Mb1485c, PE_PGRS27, len: 1408 aa. Similar to Rv1450c, len: 1329 aa, from Mycobacterium tuberculosis strain H37Rv, (92.1% identity in 1417 aa overlap). Member of the Mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins, similar to Y03A_MYCTU|Q10637 hypothetical glycine-rich 49.6 kd protein (603 aa), fasta scores: opt: 2112, E(): 0, (56.5% identity in 630 aa overlap).  REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, insertions of 27 bp, 207 bp and 27 bp, substitutions of 60 bp to 63 bp and 11 bp, and a 27 bp deletion, leads to a longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (1408 aa versus 1329 aa). PE-PGRS FAMILY PROTEIN	Hemagglutinin/hemolysin-related protein	Putative pertactin family virulence factor/autotransporter	identified by match to protein family HMM PF01833; match to protein family HMM PF03797; match to protein family HMM PF05345; match to protein family HMM TIGR01414 outer membrane autotransporter barrel domain protein	Hemolysin-type calcium-binding protein	putative serine protease autotransporter	perilipin 4 [Source:HGNC Symbol;Acc:29393]	pseudo surface expressed Ser-Thr rich repeat protein	transcript_id=ENSOCUT00000005237	Hemolysin-type calcium-binding region	Outer membrane autotransporter barrel	Outer membrane autotransporter barrel	Hemolysin-type calcium-binding region	transcript_id=ENSFCAT00000007710	secreted protein containing hyalin domain	
ECOLI02569	Uncharacterized protein ypjB	pseudo	pseudo	
ECOLI02570	Putative uncharacterized protein ypjC	pseudo	pseudo	
ECOLI02571	pseudo	Code: G; COG: COG0366 putative enzyme	putative enzyme	Alpha amylase domain protein	pseudo	Alpha amylase family protein	Alpha amylase catalytic region	Alpha amylase family protein	Putative Alpha-amylase	Putative Alpha-amylase	pseudo	
ECOLI02571	pseudo	Code: G; COG: COG0366 putative enzyme	putative enzyme	Alpha amylase domain protein	pseudo	Alpha amylase family protein	Alpha amylase catalytic region	Alpha amylase family protein	Putative Alpha-amylase	Putative Alpha-amylase	pseudo	
ECOLI02571	pseudo	Code: G; COG: COG0366 putative enzyme	putative enzyme	Alpha amylase domain protein	pseudo	Alpha amylase family protein	Alpha amylase catalytic region	Alpha amylase family protein	Putative Alpha-amylase	Putative Alpha-amylase	pseudo	
ECOLI02571	pseudo	Code: G; COG: COG0366 putative enzyme	putative enzyme	Alpha amylase domain protein	pseudo	Alpha amylase family protein	Alpha amylase catalytic region	Alpha amylase family protein	Putative Alpha-amylase	Putative Alpha-amylase	pseudo	
ECOLI02572	Protein csiD	Protein csiD	Protein csiD	Residues 1 to 345 of 345 are 93 pct identical to residues 1 to 360 of a 360 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289208.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 gab protein homolog gab protein homolog	Protein csiD	Protein csiD	conserved hypothetical protein	gab protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	carbon starvation-inducible protein	conserved hypothetical protein	Protein csiD	Protein csiD	conserved hypothetical protein	conserved hypothetical protein KEGG: cps:CPS_4661 hypothetical protein	conserved hypothetical protein	Protein csiD	Putative uncharacterized protein csiD	Putative uncharacterized protein	Protein csiD	Protein of unknown function CsiD PFAM: Protein of unknown function CsiD KEGG: ecc:c3207 hypothetical protein	Putative uncharacterized protein	Predicted protein	Protein csiD	Protein csiD	
ECOLI02573	Uncharacterized protein ygaF	Sll1495 protein	Uncharacterized protein MG039	Uncharacterized protein MG039 homolog	Putative uncharacterized protein	Putative uncharacterized protein Ta1123	Putative uncharacterized protein	Predicted dehydrogenase	FAD dependent oxidoreductase	Putative GAB DTP gene cluster repressor	Alr2826 protein	hypothetical dehydrogenase	Hypothetical protein ygaF	similar to GP:15139973; identified by sequence similarity; putative conserved hypothetical protein	Transcriptional regulator, putative	best DB hits: BLAST: pir:S76786; hypothetical protein - Synechocystis sp. (strain PCC; E=5e-83 gb:AAG57767.1; AE005495_2 (AE005495) orf, hypothetical protein; E=1e-80 swissprot:P37339; YGAF_ECOLI HYPOTHETICAL 48.6 KDA PROTEIN IN; E=2e-80 COG: sll1495; COG0579 Predicted dehydrogenase; E=5e-84 VCA0747; COG0578 Glycerol-3-phosphate dehydrogenase; E=0.005 PFAM: PF01224; FAD-dependent glycerol-3-phospha; E=0.37 PF00070; Pyridine nucleotide-disulphide o; E=0.038 conserved hypothetical protein-putative oxidoreductase	Product confidence : hypothetical Gene name confidence : hypothetical CONSERVED HYPOTHETICAL PROTEIN	Dehydrogenase, FAD-dependent	hypothetical protein	hypothetical conserved protein	Putative uncharacterized protein	AMINOBUTYRALDEHYDE DEHYDROGENASE	Glycerol-3-phosphate dehydrogenase	Putative transcriptional regulator	Putative uncharacterized protein ygaF	GLYCEROL-3-PHOSPHATE DEHYDROGENASE	Aminobutyraldehyde dehydrogenase	SCD17A.05c, conserved hypothetical protein, len: 426 aa; similar to TR:P74590 (EMBL:D90916) Synechocystis sp. hypothetical 43.5 kDa protein SLL1495, 397 aa; fasta scores: opt: 1264 z-score: 1402.4 E(): 0; 49.1% identity in 401 aa overlap conserved hypothetical protein	Predicted dehydrogenase	
ECOLI02574	Succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	similar to sp|P38067 Saccharomyces cerevisiae YBR006w UGA2 succinate semialdehyde dehydrogenase P9.1.f7.  1, start by similarity	DEHA2B06556p;similar to uniprot|P38067 Saccharomyces cerevisiae YBR006W UGA2 Succinate semialdehyde dehydrogenase;	Succinate semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	putative succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	go_component: cytoplasm [goid 0005737]; go_function: succinate-semialdehyde dehydrogenase [NAD(P)+] activity [goid 0009013]; go_process: glutamate catabolism [goid 0006538]; go_process: response to oxidative stress [goid 0006979] succinate-semialdehyde dehydrogenase, putative	Succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE [NADP+] PROTEIN	Succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase, NADP- dependent activity	CDS_ID OB2247 succinate-semialdehyde dehydrogenase	Succinate-semialdehyde dehydrogenase	NAD-dependent aldehyde dehydrogenase	similar to Escherichia coli K12 succinate-semialdehyde dehydrogenase, NADP-dependent activity gi: 1789015 (483 aa). BLAST with identity of 96% in 483 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Probable succinate-semialdehyde dehydrogenase oxidoreductase protein	identified by similarity to SP:P25526; match to protein family HMM PF00171; match to protein family HMM TIGR01780 succinate-semialdehyde dehydrogenase	InterProMatches:IPR002086; Biological Process: metabolism (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491) succinate-semialdehyde dehydrogenase	IPR002086: Aldehyde dehydrogenase succinate-semialdehyde dehydrogenase I, NADP-dependent	similar to Salmonella typhi CT18 succinate-semialdehyde dehydrogenase succinate-semialdehyde dehydrogenase	
ECOLI02575	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase activity	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	Residues 1 to 375 of 375 are 98 pct identical to residues 52 to 426 of a 426 aa protein from Escherichia coli K12 ref: NP_417148.1 4-aminobutyrate aminotransferase activity	4-aminobutyrate aminotransferase	Mb2620, gabT, len: 449 aa. Equivalent to Rv2589, len: 449 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 449 aa overlap). Probable gabT, 4-aminobutyrate aminotransferase (EC 2.6.1.9), equivalent to P40829|GABT_MYCLE|ML0485|MLCB1259.03c|B1177_F2_67 4-AMINOBUTYRATE AMINOTRANSFERASE (446 aa), FASTA scores: opt: 2468, E(): 4.5e-141, (83.75% identity in 449 aa overlap). Also highly similar to others e.g. O86823|GABT from Streptomyces coelicolor (444 aa), FASTA scores: opt: 1832, E(): 8e-103, (63.9% identity in 443 aa overlap); AAK79395|CAC1427 from Clostridium acetobutylicum (445 aa), FASTA scores: opt: 1283, E(): 8.4e-70, (45.75% identity in 433 aa overlap); Q9KE66|BH0991 from Bacillus halodurans (443 aa), FASTA scores: opt: 1224, E(): 2.9e-66, (44.55% identity in 431 aa overlap); etc. Contains PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. BELONGS TO CLASS-III OF PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASES. COFACTOR: PYRIDOXAL PHOSPHATE. 4-AMINOBUTYRATE AMINOTRANSFERASE GABT (GAMMA-AMINO-N-BUTYRATE TRANSAMINASE) (GABA TRANSAMINASE) (GLUTAMATE:SUCCINIC SEMIALDEHYDE TRANSAMINASE) (GABA AMINOTRANSFERASE) (GABA-AT)	IPR004632: Bacterial 4-aminobutyrate aminotransferase; IPR005814: Aminotransferase class-III 4-aminobutyrate aminotransferase	similar to Salmonella typhi CT18 4-aminobutyrate aminotransferase 4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	identified by similarity to SP:P22256; match to protein family HMM PF00202; match to protein family HMM TIGR00700 4-aminobutyrate transaminase	identified by match to protein family HMM PF00202; match to protein family HMM TIGR00700 4-aminobutyrate transaminase	4-aminobutyrate aminotransferase	Code: E; COG: COG0160 4-aminobutyrate aminotransferase activity	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	4-aminobutyrate aminotransferase	
ECOLI02576	GABA permease	GabA permease	GABA permease	GABA-specific permease	Gamma-aminobutyrate permease	Putative amino acid permease	GABA permease	Gamma-aminobutyrate permease	GABA permease	Transport permease protein of gamma-aminobutyrate	SC8E4.03, probable amino acid permease, len: 422 aa; similar to SW:GABP_BACSU (EMBL:U31756) Bacillus subtilis GABA permease (4-amino butyrate transport carrier) GabP, 469 aa; fasta scores: opt: 1479 z-score: 1502.0 E(): 0; 58.5% identity in 366 aa overlap, to SW:GABP_ECOLI (EMBL:M88334) Escherichia coli GABA permease (4-amino butyrate transport carrier) GabP, 466 aa; fasta scores: opt: 1334 z-score: 1355.6 E(): 0; 52.4% identity in 372 aa overlap and to S. ceolicolor SC8E4A.01 517 aa; fasta scores: opt: 1367 z-score: 1291.7 E(): 0; 54.4% identity in 371 aa overlap. Contains Pfam match to entry PF00324 aa_permeases, Amino acid permease and match to Prosite entry PS00218 Amino acid permeases signature.  Contains also several possible hydrophobic membrane spanning regions putative amino acid permease	Residues 22 to 425 of 425 are 99 pct identical to residues 1 to 404 of a 466 aa protein from Escherichia coli K12 ref: NP_417149.1 transport permease protein of gamma-aminobutyrate	IPR002293: Amino acid/polyamine transporter, family I; IPR004840: Amino acid permease; IPR004841: Amino acid permease-associated region APC family, gamma-aminobutyrate transport protein, RpoS dependent	similar to Salmonella typhi CT18 GabA permease (4-amino butyrate transport carrier) GabA permease (4-amino butyrate transport carrier)	RpoS dependent gamma-aminobutyrate transport protein	gamma-aminobutyrate permease	identified by match to protein family HMM PF00324; match to protein family HMM TIGR01773 GABA permease	identified by match to protein family HMM PF00324; match to protein family HMM TIGR01773 GABA permease	GABA permease	Code: E; COG: COG1113 transport permease protein of gamma-aminobutyrate	Code: E; COG: COG1113 transport permease protein of gamma-aminobutyrate	GABA permease	GABA transporter	Code: E; COG: COG1113 transport permease protein of gamma-aminobutyrate	GABA permease precursor	GABA permease identified by match to protein family HMM PF00324; match to protein family HMM TIGR01773	GabA permease	GABA permease	GABA permease TIGRFAM: GABA permease PFAM: amino acid permease-associated region KEGG: bur:Bcep18194_A3609 GabA transporter	
ECOLI02577	Uncharacterized HTH-type transcriptional regulator ygaE	Transcriptional regulator	Putative transcriptional regulator	putative LuxZ	Hypothetical transcriptional regulator ygaE	Putative regulatory protein	Putative regulatory protein	Putative transcriptional regulator	Putative LuxZ	Putative transcriptional regulator	CDS_ID OB2880; GntR family transcriptional regulator	hypothetical protein	Bacterial regulatory protein, GntR family	2SC10A7.23, probable gntR family regulatory protein, len: 230 aa; similar to SW:YBPA_BURCE (EMBL:M86348) Burkholderia cepacia hypothetical transcriptional regulator in BphA 5' region, 245 aa; fasta scores: opt: 381 z-score: 442.5 E(): 3.8e-17; 36.0% identity in 211 aa overlap. Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family putative gntR family regulatory protein	Putative transcriptional regulator LuxZ	Residues 1 to 226 of 226 are 99 pct identical to residues 1 to 226 of a 226 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289214.1 putative transcriptional regulator	IPR000524: Bacterial regulatory protein, GntR family putative transcriptional repressor (GntR familiy)	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Transcriptional regulator, putative	Putative GntR family transcriptional repressor	putative transcriptional regulator (GntR family)	regulatory protein GntR, HTH:GntR, C-terminal	Code: K; COG: COG1802 putative transcriptional regulator	BELONGS TO THE GNTR FAMILY OF TRANSCRIPTIONAL REGULATORS. transcriptional regulator, GntR family	Code: K; COG: COG1802 putative transcriptional regulator	transcriptional regulator, GntR family	transcriptional regulator, GntR family	transcriptional regulator, GntR family	Code: K; COG: COG1802 putative transcriptional regulator	
ECOLI02578	Uncharacterized protein ygaU	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Protein ygaU	Putative membrane protein	Putative membrane protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	LysM domain protein	Putative membrane protein	Putative uncharacterized protein ygaU	hypothetical protein	Residues 10 to 158 of 158 are 100 pct identical to residues 1 to 149 of a 149 aa protein from Escherichia coli O157:H7 ref: NP_311553.1 orf, conserved hypothetical protein	Hypothetical peptidoglycan-binding lysm protein	identified by match to protein family HMM PF01476; match to protein family HMM PF04972 LysM/phospholipid-binding domain protein	IPR002482: Peptidoglycan-binding LysM; IPR007055: Transport-associated domain putative LysM domain	similar to Salmonella typhimurium putative LysM domain putative LysM domain	Putative uncharacterized protein	Uncharacterized BCR XkdP protein	LysM domain protein	Putative LysM domain protein	conserved hypothetical protein, probably involved in cell wall turnover	Putative LysM domain protein	conserved hypothetical protein	identified by match to protein family HMM PF01476; match to protein family HMM PF04972 LysM domain protein	Peptidoglycan-binding LysM:Transport-associated	Peptidoglycan-binding LysM:Transport-associated	Code: S; COG: COG1652 conserved hypothetical protein	Code: S; COG: COG1652 conserved hypothetical protein	
ECOLI02579	UPF0057 membrane protein yqaE	Plasma membrane proteolipid 3 [Source:GeneDB_Spombe;Acc:SPBC713.11c]	similar to sp|P56508 Saccharomyces cerevisiae YDR525wa singleton, start by similarity	UPF0057 membrane protein ssr1169	DEHA2C01320p;similar to uniprot|P87284 Saccharomyces cerevisiae YDR276C PMP3 plasma membrane protein involved in salt tolerance;	UPF0057 membrane protein PA0567	Stress induced protein	Putative uncharacterized protein	Putative uncharacterized protein	UPF057 membrane protein yqaE	go_component: plasma membrane [goid 0005886]; go_process: cation transport [goid 0006812] cation transport-related protein, putative	Putative membrane protein	Putative uncharacterized protein	UPF0057 membrane protein yqaE	IPR000612: Protein of unknown function UPF0057 putative YqaE family transport protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Pmp3 family protein	Putative YqaE family transport protein	go_process: response to stress [goid 0006950] stress response RCI peptide, putative	identified by match to protein family HMM PF01679; similar to Arabidopsis thaliana low temperature and salt responsive protein LTI6B. unnamed protein product	identified by similarity to SP:Q9I5W9; match to protein family HMM PF01679 conserved hypothetical protein	Protein of unknown function UPF0057	Code: S; COG: COG0401 conserved hypothetical protein	Protein of unknown function UPF0057	Evidence 4 : Homologs of previously reported genes of unknown function; PubMedId : 9342870; Product type m : membrane component conserved protein of unknown function ; putative low temperature and salt responsive protein	Code: S; COG: COG0401 conserved hypothetical protein	protein of unknown function UPF0057	conserved hypothetical protein	
ECOLI02580	Uncharacterized HTH-type transcriptional regulator ygaV	Transcriptional regulator, ArsR family	Transcriptional regulator, ArsR family	Putative uncharacterized protein	Transcriptional regulator, ArsR family	Transcriptional regulator, ArsR family	Putative transcriptional regulator	putative Transcription activator HlyU	Hypothetical transcriptional regulator ygaV	similar to GB:L04270, SP:P36941, and PID:339762; identified by sequence similarity; putative transcriptional regulator, ArsR family	Transcriptional activator hlyU	NODULATION PROTEIN NOLR	Putative uncharacterized protein	similar to AL078610-52|CAB44425.1| percent identity: 47 in 119 aa putative transcription regulator	transcriptional regulator, nolR protein	Transcriptional activator HLYU, HTH of ArsR family	Transcriptional regulator	Residues 1 to 99 of 99 are 97 pct identical to residues 1 to 99 of a 99 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289217.1 orf, conserved hypothetical protein	Probable transcriptional regulator, ArsR family	IPR000485: Bacterial regulatory proteins, AsnC/Lrp; IPR001845: Bacterial regulatory protein, ArsR family putative regulatory protein, arsR family	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	similar to BR1589, transcriptional regulator, ArsR family transcriptional regulator, ArsR family	Transcriptional regulator, ArsR family	transcriptional activator HlyU	Transcriptional regulator, ArsR family	Putative arsR family regulatory protein	Transcriptional regulatory protein, ArsR family	Code: K; COG: COG0640 conserved hypothetical protein	Bacterial regulatory protein LysR, HTH motif:Bacterial regulatory protein, ArsR family	
ECOLI02581	Inner membrane protein ygaP	Rhodanese family protein	Putative uncharacterized protein	Putative uncharacterized protein	Alr3905 protein	Putative uncharacterized protein	Rhodanese-related sulfurtransferases	Hypothetical protein ygaP	Putative uncharacterized protein	PMID: 9733650 PMID: 8702871 best DB hits: BLAST: swissprot:P73801; YC61_SYNY3 HYPOTHETICAL 19.1 KD PROTEIN SLR1261; E=5e-25 embl:CAB62750.1; (AL133424) hypothetical protein SCF56.05; E=6e-17 swissprot:P55734; YGAP_ECOLI HYPOTHETICAL 18.6 KD PROTEIN IN; E=2e-14 COG: slr1261; COG0607 Rhodanese-related sulfurtransferases; E=5e-26 PFAM: PF00581; Rhodanese-like domain; E=2.1e-15 conserved hypothetical protein	Putative uncharacterized protein ygaP	Putative uncharacterized protein	SCF56.05, hypothetical protein, len: 194 aa; similar to various hypothetical proteins, e.g.  SW:YC61_SYNY3 (EMBL:D90909) Synechocystis sp. hypothetical 19.1 kD proetin, 179 aa; fasta scores: opt: 349 z-score: 408.6 E(): 2.2e-15; 41.3% identity in 155 aa overlap conserved hypothetical protein SCF56.05	Residues 1 to 174 of 174 are 97 pct identical to residues 1 to 174 of a 174 aa protein from Escherichia coli K12 ref: NP_417154.1 orf, conserved hypothetical protein	hypothetical protein	IPR000010: Cysteine protease inhibitor; IPR001763: Rhodanese-like putative rhodanese-related sulfurtransferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Rhodanese-related sulfurtransferases PspE protein	Similar to Q8YQC8 Hypothetical protein from Anabaena sp. (177 aa). FASTA: opt: 465 Z-score: 572.2 E(): 5e-24 Smith-Waterman score: 465; 43.023 identity in 172 aa overlap ORF ftt1426c conservered hypothetical membrane protein	Putative rhodanese-related sulfurtransferase	Rhodanese-like protein	Code: P; COG: COG0607 conserved hypothetical protein	Code: P; COG: COG0607 conserved hypothetical protein	Rhodanese-like protein	rhodanese domain protein identified by match to protein family HMM PF00581	Rhodanese-like	putative detoxifying sulphurtransferase	rhodanese family protein identified by match to protein family HMM PF00581	Rhodanese-like	
ECOLI02582	DNA-binding protein stpA	Hns	DNA-binding protein stpA	DNA-binding protein stpA	DNA-binding protein stpA	Residues 1 to 134 of 134 are 100 pct identical to residues 1 to 134 of a 134 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289219.1 DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing?	IPR001801: Histone-like nucleoid-structuring protein H-NS DNA-binding protein with chaperone activity	similar to Salmonella typhi CT18 DNA-binding protein StpA DNA-binding protein StpA	DNA-binding protein stpA	H-NS-like protein; chaperone activity; possibly involved in RNA splicing; Code: R; COG: COG2916 DNA-binding protein	DNA-binding protein; H-NS-like protein; chaperone activity; possibly involved in RNA splicing; Code: R; COG: COG2916 StpA	H-NS-like protein; chaperone activity; possibly involved in RNA splicing; Code: R; COG: COG2916 DNA-binding protein	DNA-binding protein StpA	DNA-binding protein H-NS	DNA-binding protein StpA	Histone family protein nucleoid-structuring protein H-NS	DNA-binding protein stpA Code: R; COG: COG2916	DNA-binding protein StpA	Nucleoid protein StpA	DNA-bending protein with chaperone activity	Putative uncharacterized protein	H-NS histone family protein StpA	Histone family protein nucleoid-structuring protein H-NS	DNA binding protein, nucleoid-associated	H-NS histone family protein StpA	Histone family protein nucleoid-structuring protein H-NS	H-NS histone family protein StpA	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02583	Uncharacterized protein ygaW	Putative membrane protein	putative inner membrane protein	Hypothetical protein ygaW	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein VP1070	Uncharacterized protein ygaW	Putative uncharacterized protein	Residues 1 to 149 of 149 are 100 pct identical to residues 1 to 149 of a 149 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289220.1 orf, conserved hypothetical protein	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	putative membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein ygaW	Membrane protein	Putative membrane protein	conserved hypothetical protein	Membrane protein	conserved hypothetical protein	
ECOLI02584	Uncharacterized protein ygaC	Hypothetical protein ygaC	Uncharacterized protein ygaC	Residues 1 to 114 of 114 are 100 pct identical to residues 5 to 118 of a 118 aa protein from Escherichia coli dbj: BAA16536.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ygaC	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ygaC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02585	Uncharacterized protein ygaM	Hypothetical protein ygaM	Uncharacterized protein ygaM	Residues 1 to 80 of 80 are 100 pct identical to residues 1 to 80 of a 113 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289222.1 orf, conserved hypothetical protein	putative inner membrane protein	Putative inner membrane protein	Code: S; COG: COG4575 conserved hypothetical protein	Code: S; COG: COG4575 conserved hypothetical protein	Code: S; COG: COG4575; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ygaM	conserved hypothetical protein Code: S; COG: COG4575	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ygaM	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative uncharacterized protein ygaM	Putative uncharacterized protein	
ECOLI02586	Glutaredoxin-like protein nrdH	Ribonucleoside-diphosphate reductase 2, NrdH- redoxin	Glutaredoxin protein	Putative glutaredoxin	Glutaredoxin and related proteins	Glutaredoxin electron transport component of NrdEF	Glutaredoxin-like protein nrdH	NrdH-redoxin	similar to GP:1800061; identified by sequence similarity; putative glutaredoxin-like protein nrdH	Putative glutaredoxin	Putative glutaredoxin-like protein	GLUTAREDOXIN	Putative glutaredoxin	Putative uncharacterized protein	Glutaredoxin-like protein nrdH	similar to AF112535-1|AAD41034.1| percent identity: 85 in 77 aa putative glutaredoxin NrdH	Glutaredoxin-like protein nrdH	Residues 1 to 81 of 81 are 100 pct identical to residues 1 to 81 of a 81 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289225.1 glutaredoxin-like protein; hydrogen donor	Putative glutaredoxin	Glutaredoxin-like protein NrdH	Glutaredoxin-like protein NrdH	Glutaredoxin	glutaredoxin	NrdH	Glutaredoxin protein	Glutaredoxin NrdH, putative	Mb3079c, nrdH, len: 79 aa. Equivalent to Rv3053c, len: 79 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 79 aa overlap). Probable nrdH, glutaredoxin-like protein, equivalent to Q9CBP8|NRDH|ML1736 from Mycobacterium leprae (80 aa), FASTA scores: opt: 478, E(): 2.7e-27, (91.15% identity in 79 aa overlap), and similar to many glutaredoxin-like proteins e.g. Q9XD65|NRDH from Corynebacterium glutamicum (Brevibacterium flavum) (77 aa), FASTA scores: opt: 382, E(): 1.5e-20, (72.35% identity in 76 aa overlap); and Q56108|NRDH_SALTY from Salmonella typhimurium (81 aa), FASTA scores: opt: 243, E(): 9.9e-11, (45.85% identity in 72 aa overlap). BELONGS TO THE GLUTAREDOXIN FAMILY. PROBABLE GLUTAREDOXIN ELECTRON TRANSPORT COMPONENT OF NRDEF (GLUTAREDOXIN-LIKE PROTEIN) NRDH	Glutaredoxin-like protein nrdH	IPR000345: Cytochrome c heme-binding site glutaredoxin-like protein; hydrogen donor	
ECOLI02587	Protein nrdI	Protein nrdI	NrdI-like protein	NrdI protein	Protein nrdI	Protein nrdI	NrdI protein	Protein nrdI	Protein nrdI	NrdI protein	Ribonucleotide reduction-related protein	Protein nrdI	identified by match to protein family HMM TIGR00333 nrdI protein	similar to GB:M82882, and SP:P32519; identified by sequence similarity; putative nrdI protein	Protein nrdI	Putative uncharacterized protein nrdI	Protein nrdI	Protein nrdI	Protein nrdI	Protein nrdI	Protein nrdI	NrdI protein	Protein nrdI	nrdI protein	Residues 1 to 136 of 136 are 100 pct identical to residues 82 to 217 of a 217 aa protein from Escherichia coli dbj: BAA16538.1 orf, conserved hypothetical protein	Protein nrdI	Protein nrdI	Protein nrdI	Protein nrdI	
ECOLI02588	Ribonucleoside-diphosphate reductase 2 subunit alpha	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase alpha subunit	Ribonucleoside-diphosphate reductase subunit alpha	Ribonucleoside reductase large chain	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase alpha chain	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase subunit alpha	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase alpha chain, C-terminal region	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase 2 alpha chain	ribonucleoside-diphosphate reductase, alpha subunit, group I intron-containing	similar to GP:15154934, and SP:P39452; identified by sequence similarity; putative ribonucleoside-diphosphate reductase, alpha subunit	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase subunit alpha	Ribonucleoside-diphosphate reductase	ribonucleoside-diphosphate reductase alpha subunit	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	Ribonucleoside-diphosphate reductase	
ECOLI02589	Ribonucleoside-diphosphate reductase 2 subunit beta	Ribonucleoside-diphosphate reductase subunit beta	Ribonucleoside-diphosphate reductase subunit beta	Ribonucleoside-diphosphate reductase 2 beta chain	Ribonucleoside-diphosphate reductase 2, beta subunit	Ribonucleoside-diphosphate reductase, beta chain	Ribonucleoside-diphosphate reductase 2 beta chain	Ribonucleoside-diphosphate reductase 2 beta chain	Ribonucleoside-diphosphate reductase, beta subunit	Ribonucleotide reductase beta subunit	Ribonucleoside-diphosphate reductase subunit beta	Ribonucleoside-diphosphate reductase beta chain	Ribonucleoside-diphosphate reductase, beta subunit	Ribonucleoside-diphosphate reductase 2 beta chain	Ribonucleoside-diphosphate reductase 2, beta subunit	identified by match to protein family HMM PF00268 ribonucleoside-diphosphate reductase, beta subunit	similar to GP:15154935, GB:M63193, SP:P19971, PID:1399964, and PID:189701; identified by sequence similarity; putative ribonucleoside-diphosphate reductase, beta subunit	Ribonucleotide reductase beta subunit	Ribonucleoside-diphosphate reductase 2 beta chain	Putative ribonucleoside-diphosphate reductase beta subunit	Ribonucleotide diphosphate reductase subunit beta	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN	Putative ribonucleotide reductase, small subunit	Ribonucleotide reductase beta-chain 1	Ribonucleoside-diphosphate reductase 2, beta chain	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN	similar to AF112536-1|AAD41037.1| percent identity: 89 in 334 aa ribonucleotide reductase beta chain	Putative uncharacterized protein	Ribonucleoside-diphosphate reductase beta chain	
ECOLI02590	Glycine betaine/L-proline transport ATP-binding protein proV	Glycine betaine/L-proline ABC transporter, ATP- binding protein	Glycine betaine transport ATP-binding protein	ABC transporter superfamily for glycine betaine/proline, ATP binding	CBS domain:ATP/GTP-binding site motif A (P- loop):ABC transporter:AAA ATPase	Glycine betaine/L-proline ABC transporter, ATP- binding subunit	ABC transporter, nucleotide binding/ATPase protein	Glycine betaine/L-proline ABC transporter, ATP- binding protein	Probable glycine betaine/L-proline transport ATP- binding protein	ATPase homolog GbuA	Glycine betaine transport ATP-binding protein	Glycine betaine transport ATP-binding protein	Glycine betaine/L-proline ABC transporter, ATP- binding protein	Putative glycine betaine/L-proline transport ATP- binding protein	Glycine betaine, L-proline ABC transporter, ATP- binding protein	Glycine betaine/L-proline transport ATP-binding protein proV	identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186 glycine betaine/L-proline ABC transporter, ATP-binding protein	similar to SP:P46920, GB:M88282, SP:P40200, and PID:338672; identified by sequence similarity; putative glycine betaine/L-proline ABC transporter, ATP-binding protein	Glycine/betaine/L-proline ABC transporter, ATP binding protein	Glycine betaine/L-proline transport ATP-binding protein	Glycine betaine transport ATP-binding protein	Glycine betaine/L-proline ABC transporter, ATP- binding protein	Putative glycine betaine/proline ABC transporter	Glycine betaine/L-proline ABC transporter, ATP- binding protein	Putative glycine betaine/proline ABC transporter	GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV	Putative ABC transporter, ATP-binding protein, proline/glycine betaine transport system	ABC superfamily	ATP-binding component of transport system for glycine, betaine and proline	
ECOLI02591	Glycine betaine/L-proline transport system permease protein proW	ABC-type proline/glycine betaine transport system, permease component related protein	ABC transporter, membrane spanning protein	Glycine betaine/L-proline transport system permease protein P	Probable glycine betaine/L-proline transport system permease protein	Glycine betaine/L-proline transport system permease	putative permease	Glycine betaine/L-proline transport system permease protein proW	similar to GP:6119662, and GP:6119854; identified by sequence similarity; putative glycine betaine/L-proline ABC transporter, permease protein, putative	Glycine/betaine/L-proline ABC transporter, permease protein	Glycine betaine/L-proline transport system permease protein	Putative glycine-betaine binding permease protein	Glycine betaine/L-proline ABC transporter, permease protein	Glycine betaine transport system permease protein	GLYCINE BETAINE/L-PROLINE TRANSPORT SYSTEM PERMEASE PROTEIN PROW	Glycine betaine/L-proline transport system permease	High-affinity transport system for glycine betaine and proline	CDS_ID OB1000 glycine betaine ABC transporter permease	Residues 1 to 354 of 354 are 99 pct identical to residues 1 to 354 of a 354 aa protein from Escherichia coli K12 ref: NP_417164.1 high-affinity transport system for glycine betaine and proline	Glycine betaine/L-proline transport system permease	Glycine betaine/L-proline transport system permease protein proW	InterProMatches:IPR000515; glycine betaine transport,Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) glycine betaine ABC transporter (permease)	glycine betaine ABC transporter permease	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), glycine/betaine/proline transport protein	similar to Salmonella typhi CT18 glycine betaine/L-proline transport system permease protein P glycine betaine/L-proline transport system permease protein P	similar to BRA0739, glycine betaine/L-proline ABC transporter, permease protein, hypothetical glycine betaine/L-proline ABC transporter, permease protein, hypothetical	ABC glycine/betaine/L-proline transporter, permease subunit proW	ABC transporter,membrane component, glycine betaine/proline family	glycine betaine/L-proline transport system permease protein ProW	
ECOLI02592	Glycine betaine-binding periplasmic protein	ABC transporter, nucleotide binding/ATPase protein	Glycine betaine-binding periplasmic protein	Probable glycine betaine/L-proline binding protein	Glycine betaine-binding periplasmic protein	Glycine betaine-binding periplasmic protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by FrameD PUTATIVE AMINO ACID-BINDING PERIPLASMIC PROTEIN	Glycine betaine ABC transporter, periplasmic glycine betaine-binding protein	ABC superfamily	Glycine betaine-binding periplasmic protein	hypothetical protein	Residues 15 to 344 of 344 are 99 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli O157:H7 ref: NP_311569.1 high-affinity glycine betaine - proline transport system protein	Glycine betaine-binding periplasmic protein	Glycine betaine-binding periplasmic protein ProX	IPR007210: Substrate-binding region of ABC-type glycine betaine transport system ABC superfamily (bind_prot), glycine/betaine/proline transport protein	similar to Salmonella typhi CT18 glycine betaine-binding periplasmic protein precursor glycine betaine-binding periplasmic protein precursor	ABC transporter, periplasmic proline/glycine/betaine-binding protein proX	glycine betaine/L-proline-binding protein	ABC-type proline/glycine betaine transport systems, periplasmic components ProX protein	Glycine/betaine/proline transport protein	periplasmic components; similar to COG2113: ABC-type proline/glycine betaine transport systems hypothetical protein	identified by match to protein family HMM PF04069 histidine transporter, periplasmic histidine-binding protein	identified by match to protein family HMM PF04069 histidine transporter, periplasmic histidine-binding protein	Code: E; COG: COG2113 high-affinity transport system for glycine betaine and proline	ABC Glycine betaine/L-proline transporter, periplasmic ligand binding protein	high-affinity transport system for glycine betaine and proline; Code: E; COG: COG2113 ProX	glycine betaine/L-proline ABC transporter,substrate-binding periplasmic protein	glycine betaine/L-proline ABC transporter periplasmic component	Substrate-binding region of ABC-type glycine betaine transport system	


ECOLI02594	Inner membrane protein ygaZ	AzlC family protein	Branched chain amino acid transport protein AzlC	Uncharacterized membrane protein AF_1755	AzlC related protein	AzlC family protein	Putative uncharacterized protein	AzlC family protein	Transporter	Putative uncharacterized protein	AzlC family protein	Related to branched-chain amino acid transport permease	Lmo1442 protein	Branched-chain amino acid transport protein azlC	Branched-chain amino acid transport protein	Hypothetical protein ygaZ	Putative uncharacterized protein	similar to GP:14970542; identified by sequence similarity; putative AzlC family protein	AzlC family protein	pseudo	Putative membrane protein	Putative amino acid transporter	Putative branched-chain amino acid transport protein	Putative membrane protein	Putative uncharacterized protein	Uncharacterized membrane protein HP_1331	branched-chain amino acid transporter	Putative integral membrane protein; possible branched-chain amino acid permease	Putative integral membrane amino acid transport protein	
ECOLI02595	Uncharacterized protein ygaH	Putative membrane protein	Putative uncharacterized protein ygaH	Residues 1 to 111 of 111 are 100 pct identical to residues 1 to 111 of a 111 aa protein from Escherichia coli O157:H7 ref: NP_311572.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to unknown protein YgaH of Escherichia coli	Putative LIV-E family branched chain amino acid exporter, small subunit	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein ygaH	Membrane protein	Putative membrane protein	conserved hypothetical protein	Membrane protein	conserved hypothetical protein	Putative transport protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	
ECOLI02596	Transcriptional repressor mprA	Transcriptional regulator marR family	Transcriptional regulator, MarR family	Putative transcriptional regulator	Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Transcriptional repressor mprA	identified by match to protein family HMM PF01047 transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Negative regulator of multidrug resistance	transcriptional regulator (MarR family)	Transcriptional repressor mprA	Residues 1 to 143 of 143 are 97 pct identical to residues 34 to 176 of a 176 aa protein from Escherichia coli O157:H7 ref: NP_311573.1 regulator of plasmid mcrB operon	MarR-family transcriptional regulatory protein	Transcriptional repressor mprA	Transcription regulator	Transcriptional repressor emr operon, MarR family	Transcriptional regulator	hypothetical DNA-binding protein	transcriptional regulator, MarR family	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark transcriptional regulator marR family	IPR000835: Bacterial regulatory protein, MarR family transcriptional repressor of emrAB operon (MarR family)	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Transcriptional regulator marR family	Transcriptional repressor of for multidrug resistance pump	Transcriptional repressor of emrAB operon	transcriptional regulator marR family	
ECOLI02597	Multidrug resistance protein A	Multidrug resistance protein A	putative multidrug resistance protein	Multidrug resistance protein A	Multidrug resistance secretion protein	similar to Escherichia coli K12 multidrug resistance secretion protein gi: 1789041 (391 aa). BLAST with identity of 97% in 391 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Multidrug resistance protein A	Multidrug resistant protein A	ABC-transporter membrane fusion protein	IPR005694: Efflux pump membrane protein Emr; IPR006143: Secretion protein HlyD multidrug resistance secretion protein	similar to Salmonella typhi CT18 multidrug resistance protein A multidrug resistance protein A	Multidrug efflux pump, membrane fusion (MFP/HlyD) family subunit emrA	Multidrug resistance secretion protein	Membrane fusion component of tripartite multidrug resistance system	Code: V; COG: COG1566 multidrug resistance secretion protein	Code: V; COG: COG1566 multidrug resistance secretion protein	Code: V; COG: COG1566 multidrug resistance secretion protein	Secretion protein HlyD	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance translocase	Efflux pump membrane protein precursor	Multidrug resistance secretion protein	Putative uncharacterized protein	Multidrug resistance protein A	
ECOLI02597	Multidrug resistance protein A	Multidrug resistance protein A	putative multidrug resistance protein	Multidrug resistance protein A	Multidrug resistance secretion protein	similar to Escherichia coli K12 multidrug resistance secretion protein gi: 1789041 (391 aa). BLAST with identity of 97% in 391 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Multidrug resistance protein A	Multidrug resistant protein A	ABC-transporter membrane fusion protein	IPR005694: Efflux pump membrane protein Emr; IPR006143: Secretion protein HlyD multidrug resistance secretion protein	similar to Salmonella typhi CT18 multidrug resistance protein A multidrug resistance protein A	Multidrug efflux pump, membrane fusion (MFP/HlyD) family subunit emrA	Multidrug resistance secretion protein	Membrane fusion component of tripartite multidrug resistance system	Code: V; COG: COG1566 multidrug resistance secretion protein	Code: V; COG: COG1566 multidrug resistance secretion protein	Code: V; COG: COG1566 multidrug resistance secretion protein	Secretion protein HlyD	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance protein A	Multidrug resistance translocase	Efflux pump membrane protein precursor	Multidrug resistance secretion protein	Putative uncharacterized protein	Multidrug resistance protein A	
ECOLI02598	Multidrug resistance protein B	hypothetical protein;similar to multidrug resistant protein;	Multidrug resistance protein B	Putative multidrug resistance protein B	Multidrug resistance protein B	Putative multidrug resistance protein	Putative multidrug resistance protein	Multidrug resistance protein B	pseudo	Drug resistance transporter, EmrB/QacA family	Multidrug resistance protein B	Residues 4 to 515 of 515 are 99 pct identical to residues 1 to 512 of a 512 aa protein from Escherichia coli O157:H7 ref: NP_311575.1 multidrug resistance membrane translocase	Multidrug resistance protein B	Probable multidrug resistance b (Translocase) transmembrane protein	Multidrug resistance protein B	Probable multidrug resistance protein	IPR004638: Drug resistance transporter EmrB/QacA subfamily; IPR005828: General substrate transporter; IPR007114: Major facilitator superfamily putative MFS superfamily, multidrug transport protein	similar to Salmonella typhi CT18 multidrug resistance protein B multidrug resistance protein B	MFS multidrug efflux pump, emrB subunit	Putative MFS superfamily multidrug transport protein	Best Blastp Hit: gb|AAD54074.1| (AF132910) efflux pump protein FarB [Neisseria gonorrhoeae] COG0477 Permeases efflux pump protein, fatty acid resistance	multidrug resistance; Code: GEPR; COG: COG0477 probably membrane translocase	probable membrane translocase; Code: GEPR; COG: COG0477 multidrug resistance	Drug resistance transporter EmrB/QacA subfamily	drug resistance transporter, EmrB/QacA family identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711	Multidrug resistance protein B	Multidrug resistance protein B	Multidrug resistance protein B	drug resistance transporter, EmrB/QacA subfamily TIGRFAM: drug resistance transporter, EmrB/QacA subfamily PFAM: major facilitator superfamily MFS_1 KEGG: bur:Bcep18194_A4644 drug resistance transporter EmrB/QacA subfamily	
ECOLI02599	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	putative autoinducer-2 production protein LuxS	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	identified by match to protein family HMM PF02664 autoinducer-2 production protein LuxS	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	autoinducer-2 production protein (AI-2 synthesis protein)	S-ribosylhomocysteine lyase	S-ribosylhomocysteine lyase	
ECOLI02600	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	putative glutamate-cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Residues 4 to 446 of 446 are 99 pct identical to residues 76 to 518 of a 518 aa protein from Escherichia coli K12 ref: NP_417173.1 gamma-glutamate-cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	Glutamate--cysteine ligase	IPR006334: Glutamate--cysteine ligase; IPR007370: Glutamate-cysteine ligase gamma-glutamate-cysteine ligase	similar to Salmonella typhi CT18 gamma-glutamylcysteine synthetase gamma-glutamylcysteine synthetase	Glutamate--cysteine ligase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme gamma-glutamate-cysteine ligase	Glutamate--cysteine ligase	glutamate--cysteine ligase	
ECOLI02601	Inner membrane protein yqaA	Membrane protein, putative	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein HI0489	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative integral membrane protein	Predicted membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative integral membrane protein	conserved hypothetical protein	Hypothetical protein yqaA	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Product confidence : hypothetical Gene name confidence : hypothetical conserved hypothetical membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2541	Putative uncharacterized protein	hypothetical protein (putative membrane protein)	Predicted membrane protein	
ECOLI02602	Phosphatase yqaB	Phosphoglycolate phosphatase (Pgp), conjectural	Hydrolase family protein	Uncharacterized protein HI0488	similar to uniprot|Q86ZR7 Saccharomyces cerevisiae YKL033wa;	CbbY family protein	Putative uncharacterized protein	Predicted phosphatase/phosphohexomutase	Hypothetical protein yqaB	Putative hydrolase	Putative phosphatase	CbbY family protein	Putative phosphatase	2SCG38.13, probable hydrolase, len: 238 aa; similar to SW:GPHC_ALCEU (EMBL:M68904) Alcaligenes eutrophus phosphoglycolate phosphatase, chromosomal (EC 3.1.3.18) CbbZC, 231 aa; fasta scores: opt: 300 z-score: 354.5 E(): 2.7e-12; 32.9% identity in 207 aa overlap. Contains Pfam match to entry PF00702 Hydrolase, haloacid dehalogenase-like hydrolase putative hydrolase	Predicted phosphatase/phosphohexomutase	Residues 1 to 188 of 188 are 98 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289241.1 putative phosphatase	Putative hydrolase	IPR005833: Haloacid dehalogenase/epoxide hydrolase; IPR005834: Haloacid dehalogenase-like hydrolase; IPR006402: HAD-superfamily hydrolase, subfamily IA, variant 3 putative phosphoglucomutase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative phosphoglucomutase, contains a phophatase-like domain	Similar to: HI0488, YQAB_HAEIN predicted phosphatase/phosphohexomutase	Similar to YQAB_ECOLI (P77475) Hypothetical protein yqaB from Escherichia coli (188 aa). FASTA: opt: 336 Z-score: 422.2 E(): 1.3e-15 Smith-Waterman score: 336; 33.889 identity in 180 aa overlap haloacid dehalogenase	Putative phosphoglucomutase	phosphatase	Code: R; COG: COG0637 putative phosphatase	Predicted phosphatases	Code: R; COG: COG0637 putative phosphatase	HAD-superfamily hydrolase, subfamily IA, variant 3 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509	haloacid dehalogenase-like hydrolase domain containing 1A [Source:HGNC Symbol;Acc:16818]	
ECOLI02603	Carbon storage regulator	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator	putative carbon storage regulator	Carbon storage regulator	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	PMID: 9211896 best DB hits: BLAST: swissprot:Q9WY93; CSRA_THEMA CARBON STORAGE REGULATOR HOMOLOG; E=8e-08 swissprot:P44879; CSRA_HAEIN CARBON STORAGE REGULATOR HOMOLOG; E=1e-07 gb:AAK03372.1; (AE006168) CsrA [Pasteurella multocida]; E=2e-07 COG: TM0251; COG1551 Carbon storage regulator (could also regulate; E=1e-08 PFAM: PF02599; Carbon storage regulator; E=3.6e-16 probable CsrA_thema carbon storage regulator homolog	Carbon storage regulator homolog	carbon storage regulator	Carbon storage regulator homolog	Carbon storage regulator	CDS_ID OB2503 carbon storage regulator	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator homolog	Carbon storage regulator	
ECOLI02604	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	similar to GB:Z11737, SP:P31512,  and PID:31430; identified by sequence similarity; putative alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	Alanyl-tRNA synthetase	
ECOLI02605	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Residues 1 to 166 of 166 are 100 pct identical to residues 1 to 166 of a 166 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289245.1 regulator, OraA protein	Regulatory protein recX	Regulatory protein recX	Regulatory protein recX	Regulatory protein RecX	conserved gene regulatory protein RecX	Regulatory protein RecX	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark Regulatory protein recX	IPR003783: Regulatory protein RecX putative regulatory protein RecX	similar to Salmonella typhi CT18 putative regulatory protein RecX putative regulatory protein RecX	Regulatory protein recX	Regulatory protein recX	RecX protein	Similar to: HI0599, RECX_HAEIN regulatory protein RecX	Uncharacterized BCR OraA protein	Regulatory protein recX	Regulatory protein RecX OraA	
ECOLI02606	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	similar to GB:M16626, SP:P07804,  and PID:154630; identified by sequence similarity; putative recA protein	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	Protein recA	
ECOLI02607	Protein ygaD	Bll4484 protein	Putative uncharacterized protein	Putative uncharacterized protein	Vng0368c	DEHA2D12518p;highly similar to CA2864|IPF17234.3 Candida albicans IPF17234.3;	Competence/damage-inducible protein CinA	Putative uncharacterized protein	Putative uncharacterized protein	CinA-related protein	Putative uncharacterized protein STY2951	Uncharacterized protein	Putative competence-damaged related protein	putative CinA-related protein	CinA-like protein	Protein ygaD	competence/damage-inducible protein CinA	similar to GP:15074388, and GP:15074388; identified by sequence similarity; putative competence/damage-inducible protein CinA	Competence/damage-inducible protein CinA protein, truncation	CinA-related protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative competence-damaged protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	CinA domain protein	Putative uncharacterized protein	Conserved hypothetical integral membrane protein	Competence/damage-inducible protein CinA domain protein	Putative competence-damage inducible protein	
ECOLI02608	Membrane-bound lytic murein transglycosylase B	Soluble and membrane-bound lytic transglycosylase	Membrane-bound lytic transglycosylase B	Putative exported transglycosylase	Membrane-bound lytic murein transglycosylase B	transglycosylase, putative	Membrane-bound lytic murein transglycosylase B	Membrane-bound lytic murein transglycosylase B	Membrane-bound lytic murein transglycosylase B	Membrane-bound lytic murein transglycosylase B	Murein transglycosylase domain protein	MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE B	Membrane-bound lytic murein transglycosylase B	Membrane-bound lytic murein transglycosylase B	Residues 36 to 396 of 396 are 99 pct identical to residues 1 to 361 of a 361 aa protein from Escherichia coli K12 ref: NP_417181.1 membrane-bound lytic murein transglycosylase B	Putative membrane-bound lytic murein transglycosylase B	Putative membrane-bound lytic transglycosylase	Putative membrane-bound lytic murein transglycosylase b protein	similar to membrane-bound lytic murein transglycosylase B precursor hypothetical protein	conserved gene membrane bound lytic murein transglycosylase	similar to membrane-bound lytic murein transglycosylase B precursor hypothetical protein	identified by similarity to PIR:D97614 conserved hypothetical protein	Peptidoglycan N-acetylmuramoylhydrolase	membrane-bound lytic murein transglycosylase B	similar to Salmonella typhi CT18 membrane-bound lytic transglycosylase B precursor membrane-bound lytic transglycosylase B precursor	similar to BR0031, transglycosylase, hypothetical hypothetical transglycosylase	Membrane-bound lytic transglycosylase	Putative membrane-bound lytic murein transglycosylase B	Murein hydrolase	
ECOLI02609	Glucitol/sorbitol permease IIC component	Putative uncharacterized protein	Glucitol/sorbitol-specific IIBC component of PTS system	PTS system, glucitol/sorbitol-specific IIC2 component	PTS system enzyme II sorbitol-specific factor	PTS system, sorbitol (Glucitol) phosphotransferase enzyme IIC2	PTS system, glucitol/sorbitol-specific IIC component, one of two; frag	similar to Escherichia coli K12 PTS system, glucitol-sorbitol-specific IIC component, one of two gi: 1789054 (187 aa). BLAST with identity of 92% in 131 aa.  This CDS ontains frameshift. The sequence has been checked and is believed to be correct. pseudo	InterProMatches:IPR004699; Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401), Cellular Component: integral to membrane (GO:0016021) Phosphotransferase enzyme II	PTS system, glucitol/sorbitol-specific enzyme II, C2 component	IPR004699: PTS system enzyme II sorbitol-specific factor PTS family, glucitol/sorbitol-specific enzyme IIC component,one of two IIC components	similar to Salmonella typhi CT18 PTS system, glucitol/sorbitol-specific IIBC component PTS system, glucitol/sorbitol-specific IIBC component	PTS family glucitol/sorbitol-specific enzyme IIC component	Code: G; COG: COG3730 PTS system, glucitol/sorbitol-specific IIC component, one of two	Code: G; COG: COG3730 PTS system glucitol/sorbitol-specific IIC component, one of two	PTS system, glucitol/sorbitol-specific IIC2 component COG3730 [G] Phosphotransferase system sorbitol-specific component IIC	one of two; Code: G; COG: COG3730 PTS system, glucitol/sorbitol-specific IIC component	PTS family, glucitol/sorbitol-specific enzyme IIC component,one of two IIC components	PTS system, glucitol/sorbitol-specific IIC2 component	PTS system, glucitol/sorbitol-specific IIC2 component	Pts system, glucitol/sorbitol-specific iic2 component	PTS system, glucitol/sorbitol-specific IIBC component	PTS system, glucitol/sorbitol-specific IIc2 component	PTS system, glucitol/sorbitol-specific IIC component, one of two Code: G; COG: COG3730	sorbitol PTS, EIIC	PTS system, glucitol/sorbitol-specific IIC2 component	PTS system, glucitol/sorbitol-specific IIC2 component	PTS family enzyme IIC, glucitol/sorbitol-specific	Glucitol/sorbitol permease IIC component	
ECOLI02610	Glucitol/sorbitol-specific phosphotransferase enzyme IIB component	Putative uncharacterized protein	Glucitol/sorbitol-specific IIBC component of PTS system	PTS system, glucitol/sorbitol-specific IIBC component	PTS system, glucitol/sorbitol-specific IIBC component	PTS system, sorbitol phosphotransferase enzyme IIBC	PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components; frag	Residues 1 to 319 of 319 are 98 pct identical to residues 1 to 319 of a 319 aa protein gi: 1789055 PTS system, glucitol-sorbitol-specific IIB component and second of two IIC components	InterProMatches:IPR004702; Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401), Cellular Component: integral to membrane (GO:0016021) putative phosphotransferase	PTS system, glucitol/sorbitol-specific enzyme II, BC component	IPR000719: Protein kinase; IPR004702: Sorbitol phosphotransferase enzyme II PTS family, glucitol/sorbitol-specific IIB component, one of two IIC components	similar to Salmonella typhi CT18 PTS system, glucitol/sorbitol-specific IIBC component PTS system, glucitol/sorbitol-specific IIBC component	PTS family, glucitol/sorbitol-specific IIB component	Code: G; COG: COG3732 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components	Code: G; COG: COG3732 PTS system glucitol/sorbitol-specific IIB component and second of two IIC components	PTS system, glucitol/sorbitol-specific IIBC component COG3732 [G] Phosphotransferase system sorbitol-specific component IIBC	PTS system, glucitol/sorbitol-specific IIBC component	PTS system, glucitol-sorbitol-specific IIB component and second of two IIC components	PTS system, glucitol/sorbitol-specific IIBC component	Protein-N(Pi)-phosphohistidine--sugar phosphotransferase	Pts system, glucitol/sorbitol-specific iibc component	PTS system, glucitol/sorbitol-specific IIBC component	PTS system, glucitol/sorbitol-specific IIbc component	sorbitol PTS, EIIBC	PTS system, glucitol/sorbitol-specific IIBC component	PTS system, glucitol/sorbitol-specific IIBC component	PTS family enzyme IIBC, glucitol/sorbitol- specific	Glucitol/sorbitol-specific phosphotransferase enzyme IIB component	Putative uncharacterized protein	
ECOLI02611	Glucitol/sorbitol-specific phosphotransferase enzyme IIA component	Putative uncharacterized protein	Glucitol/sorbitol-specific IIA component of PTS system	PTS system, glucitol/sorbitol-specific IIA component	PTS system, glucitol/sorbitol-specific IIA component	Phosphotransferase enzyme IIA	PTS system, glucitol/sorbitol-specific enzyme IIA component	phosphotransferase system enzyme III	PTS system, glucitol-specific enzyme III	Residues 1 to 123 of 123 are 98 pct identical to residues 1 to 123 of a 123 aa protein from Escherichia coli K12 gi: 1789056 PTS system, glucitol-sorbitol-specific enzyme IIA component	InterProMatches:IPR004716; Cellular Component: cytoplasm (GO:0005737), Molecular Function: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (GO:0008982), Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401) putative phosphotransferase	PTS system, glucitol-specific enzyme III	IPR004716: PTS system glucitol/sorbitol-specific IIA component PTS family, glucitol/sorbitol-specific	similar to Salmonella typhi Ty2 glucitol/sorbitol-specific IIA component of PTS system glucitol/sorbitol-specific IIA component of PTS system	PTS family glucitol/sorbitol-specific protein	Code: G; COG: COG3731 PTS system, glucitol/sorbitol-specific enzyme IIA component	Code: G; COG: COG3731 PTS system glucitol/sorbitol-specific enzyme IIA component	PTS system, glucitol/sorbitol-specific IIA component COG3731 [G] Phosphotransferase system sorbitol-specific component IIA	Code: G; COG: COG3731 PTS system, glucitol/sorbitol-specific enzyme IIA component	PTS system, glucitol/sorbitol-specific IIA component	PTS system, glucitol/sorbitol-specific IIA component	PTS system, glucitol/sorbitol-specific IIA component	PTS system glucitol/sorbitol-specific IIA component	Pts system, glucitol/sorbitol-specific iia component	PTS system, glucitol/sorbitol-specific IIA component	PTS system, glucitol/sorbitol-specific enzyme IIA component Code: G; COG: COG3731	sorbitol PTS, EIIA	PTS system, glucitol/sorbitol-specific IIA component	PTS system glucitol/sorbitol-specific IIA component	
ECOLI02612	Sorbitol-6-phosphate 2-dehydrogenase	Sorbitol-6-phosphate 2-dehydrogenase	Sorbitol-6-phosphate 2-dehydrogenase	Glucitol (Sorbitol)-6-phosphate dehydrogenase	Residues 1 to 259 of 259 are 99 pct identical to residues 1 to 259 of a 259 aa protein from Escherichia coli K12 ref: NP_417185.1 glucitol (sorbitol)-6-phosphate dehydrogenase	IPR002198: Short-chain dehydrogenase/reductase SDR; IPR002347: Glucose/ribitol dehydrogenase; IPR003560: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase glucitol (sorbitol)-6-phosphate dehydrogenase	similar to Salmonella typhi CT18 sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase) sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase)	Glucitol (Sorbitol)-6-phosphate dehydrogenase	Code: IQR; COG: COG1028 glucitol (sorbitol)-6-phosphate dehydrogenase	sorbitol-6-phosphate dehydrogenase; Code: IQR; COG: COG1028 glucitol-6-phosphate dehydrogenase	Sorbitol-6-phosphate 2-dehydrogenase	oxidoreductase, short chain dehydrogenase/reductase family identified by similarity to SP:P05707; match to protein family HMM PF00106	Sorbitol-6-phosphate 2-dehydrogenase	Sorbitol-6-phosphate 2-dehydrogenase	Sorbitol-6-phosphate 2-dehydrogenase	Sorbitol-6-phosphate 2-dehydrogenase	glucitol (sorbitol)-6-phosphate dehydrogenase Code: IQR; COG: COG1028	sorbitol-6-phosphate 2-dehydrogenase	Botrytis cinerea hypothetical protein	Sorbitol-6-phosphate 2-dehydrogenase	Putative uncharacterized protein	Sorbitol-6-phosphate 2-dehydrogenase	Short-chain dehydrogenase/reductase SDR	Short-chain dehydrogenase/reductase SDR	Sorbitol-6-phosphate dehydrogenase	Sorbitol-6-phosphate 2-dehydrogenase	Short-chain dehydrogenase/reductase SDR	Sorbitol-6-phosphate 2-dehydrogenase	Short-chain dehydrogenase/reductase SDR	
ECOLI02613	Glucitol operon activator protein	Glucitol operon activator protein	Glucitol operon activator protein	Glucitol operon activator	Residues 1 to 119 of 119 are 98 pct identical to residues 1 to 119 of a 119 aa protein from Escherichia coli K12 ref: NP_417186.1 glucitol operon activator	InterProMatches:IPR009693 hypothetical protein	sorbitol operon activator	putative glucitol (srl) operon regulatory protein	similar to Salmonella typhi Ty2 glucitol operon activator protein glucitol operon activator protein	Putative glucitol (Srl) operon regulatory protein	Code: K; COG: COG4578 glucitol operon activator	Code: K; COG: COG4578 glucitol operon activator	Glucitol operon activator protein	Glucitol operon activator protein	Glucitol operon activator	Glucitol operon activator protein	Glucitol/sorbitol operon activator	glucitol operon activator Code: K; COG: COG4578	DNA-binding transcriptional activator of glucitol operon	Glucitol operon activator protein	Putative uncharacterized protein	Glucitol operon activator protein	Glucitol operon activator	Glucitol operon activator protein	Glucitol operon activator	DNA-binding transcriptional activator of glucitol operon	Glucitol operon activator protein	Glucitol operon activator protein	Glucitol operon activator precursor	
ECOLI02614	Glucitol operon repressor	Transcriptional repressor accR	Glucitol operon repressor	Glucitol operon repressor	Regulator for gut (Srl), glucitol operon	Transcriptional regulator	Residues 1 to 257 of 257 are 99 pct identical to residues 1 to 257 of a 257 aa protein from Escherichia coli K12 ref: NP_417187.1 regulator for gut (srl), glucitol operon	transcriptional regulator, DeoR family	IPR001034: Bacterial regulatory protein, DeoR family transcriptional repressor for glucitol operon (DeoR family)	similar to Salmonella typhi CT18 glucitol operon repressor glucitol operon repressor	Transcriptional regulators of sugar metabolism GlpR protein	Transcriptional repressor for glucitol operon	Code: KG; COG: COG1349 regulator for gut (srl), glucitol operon	regulator for gut (srl) operon; Code: KG; COG: COG1349 regulator for glucitol operon	regulator for gut (srl) operon; Code: KG; COG: COG1349 regulator for glucitol operon	Galactitol utilization operon repressor	Glucitol operon repressor	Glucitol operon repressor	transcriptional regulator, GntR family	Putative glucitol operon repressor	Glucitol/sorbitol operon transcriptional repressor	Complete genome	regulator for gut (srl), glucitol operon Code: KG; COG: COG1349	DNA-bindng transcriptional repressor	Regulator for gut (Srl), glucitol operon	Putative uncharacterized protein	Glucitol operon repressor	Transcriptional regulator, DeoR family	Putative DeoR-family transcriptional regulator	
ECOLI02616	Anaerobic nitric oxide reductase transcription regulator norR	Anaerobic nitric oxide reductase transcription regulator norR	Anaerobic nitric oxide reductase transcription regulator norR	Sigma-54 dependent transcriptional regulator	Anaerobic nitric oxide reductase transcription regulator norR	Anaerobic nitric oxide reductase transcription regulator norR	Anaerobic nitric oxide reductase transcription regulator norR	Residues 1 to 529 of 529 are 99 pct identical to residues 1 to 529 of a 529 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289258.1 putative 2-component transcriptional regulator	IPR002078: Sigma-54 factor interaction domain; IPR003018: GAF domain; IPR003593: AAA ATPase putative regulator (EBP family)	similar to Salmonella typhi CT18 putative sigma-54-dependent transriptional regulator putative sigma-54-dependent transriptional regulator	nitric oxide reductase regulator NorR	Anaerobic nitric oxide reductase transcription regulator norR	Code: KT; COG: COG3604 putative 2-component transcriptional regulator	Code: KT; COG: COG3604 putative 2-component transcriptional regulator	transcriptional regulator, NifA subfamily, Fis Family	Transcriptional Regulator, NifA subfamily, Fis Family	Code: KT; COG: COG3604 putative 2-component transcriptional regulator	Anaerobic nitric oxide reductase transcription regulator norR	Transcriptional regulator, NifA subfamily, Fis Family	Transcriptional regulator, NifA subfamily, Fis Family	Anaerobic nitric oxide reductase transcription regulator norR	transcriptional regulator, NifA subfamily, Fis Family	two component transcriptional regulator, Fis family	Transcriptional regulator, NifA subfamily, Fis family	anaerobic nitric oxide reductase transcription regulator NorR identified by match to protein family HMM PF00158; match to protein family HMM PF01590	transcriptional regulator, NifA subfamily, Fis Family PFAM: sigma-54 factor, interaction domain-containing protein; GAF domain protein SMART: AAA ATPase KEGG: she:Shewmr4_3090 transcriptional regulator, NifA subfamily, fis family	Nitric oxide reductase transcription regulator norR	putative GAF sensor protein PFAM: sigma-54 factor, interaction domain-containing protein; GAF domain protein SMART: AAA ATPase KEGG: eca:ECA0903 anaerobic nitric oxide reductase transcription regulator	putative 2-component transcriptional regulator Code: KT; COG: COG3604	
ECOLI02615	Protein gutQ	Putative phosphosugar binding protein	Lmo0502 protein	Putative capsule expression protein	GutQ protein	Putative uncharacterized protein gutQ	Lin0502 protein	Residues 1 to 321 of 321 are 98 pct identical to residues 1 to 321 of a 321 aa protein GUTQ_ECOLI sp: P17115 GUTQ PROTEIN	Sugar phosphate isomerase involved in capsule formation	IPR000644: CBS domain; IPR001347: Sugar isomerase (SIS); IPR004800: KpsF/GutQ family protein putative polysialic acid capsule expression protein	similar to Salmonella typhi CT18 putative phosphosugar binding protein putative phosphosugar binding protein	identified by similarity to GP:16412942; match to protein family HMM PF01380 SIS domain protein	Putative polysialic acid capsule expression protein	ortholog to Escherichia coli bnum: b2708; MultiFun: Cell structure 6.7; Regulation 3.1.4 putative phosphosugar binding protein	Code: M; COG: COG0794 conserved hypothetical protein	Code: M; COG: COG0794 conserved hypothetical protein	Code: M; COG: COG0794; orf conserved hypothetical protein	arabinose-5-phosphate isomerase identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393	Putative phosphosugar binding protein	KpsF/GutQ family protein	GutQ protein	KpsF/GutQ family protein KEGG: bur:Bcep18194_C7389 KpsF/GutQ TIGRFAM: KpsF/GutQ family protein PFAM: CBS domain containing protein; sugar isomerase (SIS)	carbohydrate isomerase, KpsF/GutQ family identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393	Hypothetical protein gutQ	arabinose-5-phosphate isomerase identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393	conserved hypothetical protein	putative phosphosugar-binding protein	Sugar isomerase, KpsF/GutQ family	KpsF/GutQ family protein	
ECOLI02617	Anaerobic nitric oxide reductase flavorubredoxin	Flavoprotein	Putative uncharacterized protein	Rubredoxin	Anaerobic nitric oxide reductase flavorubredoxin	Probable flavoprotein	putative flavoprotein	Anaerobic nitric oxide reductase flavorubredoxin	Anaerobic nitric oxide reductase flavorubredoxin	Flavoprotein	probable flavoprotein	Anaerobic nitric oxide reductase flavorubredoxin homolog	Anaerobic nitric oxide reductase flavorubredoxin	Residues 1 to 479 of 479 are 99 pct identical to residues 1 to 479 of a 479 aa protein from Escherichia coli K12 ref: NP_417190.1 putative flavodoxin	flavoprotein	IPR001052: Rubredoxin; IPR001279: Beta-lactamase-like; IPR004039: Rubredoxin-type Fe(Cys)4 protein;IPR008254: Flavodoxin/nitric oxide synthase putative flavoprotein	similar to Salmonella typhi CT18 putative flavoprotein putative flavoprotein	flavorubredoxin	Anaerobic nitric oxide reductase flavorubredoxin	Metallo-beta-lactamase superfamily:flavin reductase-like domain	Code: C; COG: COG0426 putative flavodoxin	identified by similarity to SP:Q46877; match to protein family HMM PF00258; match to protein family HMM PF00753 anaerobic nitric oxide reductase flavorubredoxin	Uncharacterized flavoprotein	Code: C; COG: COG0426 putative flavodoxin	putative flavoprotein	putative diflavin flavoprotein identified by similarity to SP:P74373; match to protein family HMM PF00258; match to protein family HMM PF00753; match to protein family HMM PF01613	flavodoxin identified by match to protein family HMM PF00258; match to protein family HMM PF00753; match to protein family HMM PF01613	Beta-lactamase-like	Code: C; COG: COG0426 putative flavodoxin	
ECOLI02618	Nitric oxide reductase FlRd-NAD(+) reductase	Nitric oxide reductase FlRd-NAD(+) reductase	hypothetical oxidoreductase	Nitric oxide reductase FlRd-NAD(+) reductase	Nitric oxide reductase FlRd-NAD(+) reductase	Putative NADH peroxidase	NADH oxidase	Nitric oxide reductase FlRd-NAD(+) reductase	Rubredoxin-NAD(+) reductase	Nitric oxide reductase FlRd-NAD(+) reductase	Residues 1 to 377 of 377 are 97 pct identical to residues 1 to 377 of a 377 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289260.1 putative oxidoreductase	Probable rubredoxin reductase	NAD(P)H:rubredoxin oxidoreductase	NADH peroxidase	NADH peroxidase	IPR000103: Pyridine nucleotide-disulphide oxidoreductase, class-II; IPR000205: NAD-binding site; IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I;IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase putative oxidoreductase	similar to Salmonella typhi CT18 putative rubredoxin reductase putative rubredoxin reductase	NADH oxidase, water-forming	Putative NADH peroxidase	best blastp match gb|AAK34437.1| (AE006598) putative NADH peroxidase [Streptococcus pyogenes M1 GAS] putative NADH peroxidase	Evidence 1 : Function experimentally demonstrated in the studied organism; PubMedId : 7670642; Product type e : enzyme rubredoxin-NAD(+) reductase	flavorubredoxin-NAD(+) reductase	Nitric oxide reductase FlRd-NAD(+) reductase	putative rubredoxin reductase	identified by similarity to SP:P42454; match to protein family HMM PF00070; match to protein family HMM PF07992 rubredoxin reductase	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	NADH peroxidase	Code: R; COG: COG0446 putative oxidoreductase	Code: R; COG: COG0446 putative oxidoreductase	
ECOLI02619	Carbamoyltransferase hypF	Probable carbamoyltransferase hypF	Hydrogenase maturation protein	Hydrogenase maturation protein HypF	Hydrogenase expression/formation regulatory protein	Carbamoyltransferase hypF	Hydrogenase expression/formation regulatory protein	Transcriptional regulator HypF homolog	Hydrogenase maturation factor	773aa long hypothetical transcriptional regulatory protein hypF	Hydrogenase maturation protein HypF	Putative [NiFe] hydrogenase maturation protein	Putative uncharacterized protein	HypF hydrogenase expression/formation regulatory protein	Hydrogenase expression/formation regulatory protein	Carbamoyltransferase	Hydrogenase maturation protein	Hydrogenase maturation protein	[NiFe] hydrogenase maturation protein HypF	Probable hydrogenase accessory protein HypF	Hydrogenase maturation protein hypF	Hydrogenase maturation protein hypF	[NiFe] hydrogenase maturation protein HypF	Hydrogenase maturation protein	Transcriptional regulator	Transcriptional regulatory protein	Hydrogenase maturation protein hypF	Hydrogenase maturation factor	Hydrogenase maturation factor	
ECOLI02620	Electron transport protein hydN	Electron transport protein, containing 4Fe-4S binding domain	Electron transport protein	Electron transport protein hydN	Electron transport protein	Electron transport protein hydN	Residues 2 to 176 of 176 are 99 pct identical to residues 1 to 175 of a 175 aa protein from Escherichia coli O157:H7 ref: NP_311596.1 electron transport protein HydN	IPR000345: Cytochrome c heme-binding site; IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain electron transport protein (FeS senter) from formate to hydrogen	similar to Salmonella typhi CT18 electron transport protein electron transport protein	Electron transport protein (FeS center) from formate to hydrogen	Code: C; COG: COG1142 involved in electron transport from formate to hydrogen, Fe-S centers	identified by match to protein family HMM PF00037 iron-sulfur cluster-binding protein	involved in electron transport from formate to hydrogen, Fe-S centers; Code: C; COG: COG1142 HydN	Iron-sulfur cluster-binding protein	Putative electron-transport protein	Electron transport protein HydN	Electron transport protein hydN Code: C; COG: COG1142	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: sbo:SBO_1458 putative oxidoreductase, Fe-S subunit	formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit	4Fe-4S ferredoxin, iron-sulfur binding domain protein	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: shw:Sputw3181_2976 4Fe-4S ferredoxin, iron-sulfur binding domain protein 4Fe-4S ferredoxin iron-sulfur binding domain protein	Electron transport protein (Formate to hydrogen), Fe-S center	Putative uncharacterized protein	4Fe-4S binding domain protein	4Fe-4S ferredoxin iron-sulfur binding domain protein	Formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit	4Fe-4S binding domain protein	4Fe-4S ferredoxin iron-sulfur binding domain protein	4Fe-4S binding domain protein	

ECOLI02621	HTH-type transcriptional regulator ascG	Residues 14 to 350 of 350 are 98 pct identical to residues 1 to 337 of a 337 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289263.1 ascBF operon repressor	Code: K; COG: COG1609 ascBF operon repressor	Code: K; COG: COG1609 ascBF operon repressor	Code: K; COG: COG1609 ascBF operon repressor	Cryptic asc operon repressor	AscBF operon repressor	ascBF operon repressor Code: K; COG: COG1609	ascBF operon repressor	Transcriptional regulator, LacI family	AscBF operon repressor	Transcriptional regulator AscG	Transcriptional regulator, LacI family	DNA-binding transcriptional repressor	Transcriptional regulator AscG	Transcriptional regulator, LacI family	Transcriptional regulator AscG	Putative uncharacterized protein	Transcriptional regulator AscG	Transcriptional regulator AscG	Transcriptional regulator AscG	Transcriptional regulator	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	DNA-binding transcriptional repressor	AscG protein	DNA-binding transcriptional repressor	
ECOLI02622	PTS system arbutin-, cellobiose-, and salicin- specific EIIBC component	PTS system enzyme II ABC (Asc), cryptic, transports specific beta-glucosides	Beta-glucosides PTS, EIIBC	potential frameshift to 1576 beta-glucoside-specific enzyme II	transports specific beta-glucosides; Code: G; COG: COG1263 PTS system enzyme II ABC (asc), cryptic	transports specific beta-glucosides; Code: G; COG: COG1263 PTS system enzyme II ABC (asc), cryptic	PTS system enzyme II ABC (Asc), cryptic, transports specific beta-glucosides	PTS enzyme II-asc	PTS transport protein	PTS system, IIabc component	PTS family enzyme IIBC component, cellobiose/salicin/arbutin-specific Code: G; COG: COG1263	PTS enzyme II-asc	beta-glucosides PTS, EIIBC	PTS system, maltose and glucose-specific subfamily, IIC subunit	PTS family enzyme IIBC component, cellobiose/salicin/arbutin-specific	Phosphotransferase system, EIIC	PTS system, arbutin-, cellobiose-, and salicin- specific, EIIBC component	Phosphotransferase system EIIC	Fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component; IIC component	PTS system, arbutin-, cellobiose-, and salicin- specific, EIIBC component	PTS system, maltose and glucose-specific subfamily, IIC subunit	PTS system, arbutin-, cellobiose-, and salicin- specific, EIIBC component	Putative uncharacterized protein	Putative uncharacterized protein	Pts system arbutin-, cellobiose-, and salicin- specific eiibc component	PTS system, arbutin-, cellobiose-, and salicin- specific EIIBC component	PTS system, arbutin-, cellobiose-, and salicin- specific, EIIBC component	PTS system cellobiose/salicin/arbutin-specific IIABC components	Fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component ; IIC component	
ECOLI02623	6-phospho-beta-glucosidase ascB	6-phospho-beta-glucosidase; cryptic	Beta-glucosidase	Beta-glucosidase	Phospho-beta-glucosidase	Code: G; COG: COG2723 6-phospho-beta-glucosidase, cryptic	Code: G; COG: COG2723 6-phospho-beta-glucosidase; cryptic	cryptic protein; Code: G; COG: COG2723 6-phospho-beta-glucosidase	6-phospho-beta-glucosidase AscB	6-phospho-beta-glucosidase	transcript_id=ENSOGAT00000015896	Putative 6-phospho-beta-glucosidase	6-phospho-beta-glucosidase Also similar to CD3096 (70.4 38d)	Complete genome	6-phospho-beta-glucosidase; cryptic Code: G; COG: COG2723	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase. Glycosyl Hydrolase family 1.	6-phospho-beta-glucosidase; cryptic	Glycoside hydrolase, family 1	6-phospho-beta-glucosidase	Glycoside hydrolase family 1	Cryptic 6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	Glycoside hydrolase family 1	6-phospho-beta-glucosidase	Putative uncharacterized protein	Putative uncharacterized protein	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase AscB	
ECOLI02624	Hydrogenase 3 maturation protease	Coenzyme F420-reducing hydrogenase, delta subunit homolog	147aa long hypothetical hydrogenase	Hydrogen uptake protein:Hydrogenase maturation protease HycI	Hydrogenase maturation protease	Hydrogenase maturation protease	Hydrogenase 3 maturation protease	Hydrogenase 3 maturation protease	Hydrogenase 3 maturation protease	Putative uncharacterized protein	Hydrogenase 3 maturation protease	Ni,Fe-hydrogenase maturation factor	hydrogenase maturation protease HycI	IPR000671: Hydrogen uptake protein; IPR004420: Hydrogenase maturation protease HycI; IPR006227: Hydrogenase maturation peptidase protease involved in processing C-terminal end of HycE	similar to Salmonella typhi CT18 hydrogenase 3 maturation protease hydrogenase 3 maturation protease	Protease involved in processing C-terminal end of HycE	Hydrogenase maturation protease HycI	Code: C; COG: COG0680 protease involved in processing C-terminal end of the large subunit of hydrogenase 3	protease involved in processing C-terminal end of the large subunit of hydrogenase 3; Code: C; COG: COG0680 HycI	hydrogenase maturation protease HycI	protease involved in processing C-terminal end of the large subunit of hydrogenase 3; Code: C; COG: COG0680 HycI	Peptidase M52, hydrogen uptake protein	Hydrogenase 3 maturation protease	hydrogenase maturation protease HycI	Hydrogenase 3 maturation protease	Ni,Fe-hydrogenase maturation factor	conserved hypothetical protein	coenzyme F420-reducing hydrogenase, delta subunit (maturation peptidase)	hydrogenase maturation protease HycI identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072; match to protein family HMM TIGR00142	
ECOLI02625	Formate hydrogenlyase maturation protein hycH	Formate hydrogenlyase maturation protein hycH	Formate hydrogenlyase maturation protein hycH	Formate hydrogenlyase maturation protein	processing of HycE (part of the FHL complex)	similar to Salmonella typhi CT18 formate hydrogenlyase maturation protein formate hydrogenlyase maturation protein	Protein for processing of HycE	processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex) HycH	part of FHL complex processing of large subunit (HycE) of hydrogenase 3	processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex) HycH	Formate hydrogenlyase maturation protein HYch	Formate hydrogenlyase maturation protein HycH	Formate hydrogenlyase maturation HycH	Formate hydrogenlyase maturation protein	processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex)	formate hydrogenlyase maturation protein HycH	Formate hydrogenlyase maturation HycH	Processing of HycE	Putative uncharacterized protein	Formate hydrogenlyase maturation protein	Formate hydrogenlyase maturation HycH	HycH	Formate hydrogenlyase maturation protein	Formate hydrogenlyase maturation HycH	Formate hydrogenlyase maturation protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Formate hydrogenlyase maturation protein	
ECOLI02626	Formate hydrogenlyase subunit 7	Formate hydrogenlyase subunit 7	Hydrogenase activity	IPR006137: NADH ubiquinone oxidoreductase domain, 20 kDa subunit; IPR006138: NADH dehydrogenase (ubiquinone), 20 kDa subunit hydrogenase activity	similar to Salmonella typhi CT18 formate hydrogenlyase subunit 7 formate hydrogenlyase subunit 7	Hydrogenase activity	Hydrogenase 4, component I or formate hydrogen lyase, subunit 7	Code: C; COG: COG3260 hydrogenase activity	hydrogenase, group 4, HycG subunit	Code: C; COG: COG3260 hydrogenase activity	Formate hydrogenlyase-3 component G	Formate hydrogenlyase subunit 7	NADH ubiquinone oxidoreductase, 20 kDa subunit	hydrogenase activity Code: C; COG: COG3260	hydrogenase 3 and formate hydrogenase complex, HycG subunit	NADH ubiquinone oxidoreductase, 20 kDa subunit	Putative uncharacterized protein hycG	Putative uncharacterized protein	Formate hydrogenlyase, subunit G	NADH ubiquinone oxidoreductase 20 kDa subunit	Hydrogenase 3 and formate hydrogenase complex, HycG subunit	Formate hydrogenlyase, subunit G	NADH ubiquinone oxidoreductase 20 kDa subunit	Formate hydrogenlyase, subunit G	Putative uncharacterized protein	Putative uncharacterized protein	NADH ubiquinone oxidoreductase, 20 kDa subunit	Putative uncharacterized protein	Formate hydrogenlyase subunit 7	
ECOLI02627	Formate hydrogenlyase subunit 6	Formate hydrogenlyase subunit 6	Formate hydrogenlyase subunit 6	Probable iron-sulfur protein of hydrogenase 3	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain hydrogenase 3, putative quinone oxidoreductase	similar to Salmonella typhi CT18 formate hydrogenlyase subunit 6 formate hydrogenlyase subunit 6	Hydrogenase 3	part of FHL complex; Code: C; COG: COG1143 probable iron-sulfur protein of hydrogenase 3	part of FHL complex; Code: C; COG: COG1143 probable iron-sulfur protein of hydrogenase 3	part of FHL complex; Code: C; COG: COG1143 probable iron-sulfur protein of hydrogenase 3	4Fe-4S ferredoxin, iron-sulfur binding	Formate hydrogenase-3 component F	Formate hydrogenlyase subunit 6	NADH-quinone oxidoreductase, chain I KEGG: rsp:RSP_2523 subunit of NADH-ubiquinone oxidoreductase (complex I) that contains 2 Fe-S centers TIGRFAM: NADH-quinone oxidoreductase, chain I PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: rru:Rru_A0318 4Fe-4S ferredoxin, iron-sulfur binding	4Fe-4S ferredoxin, iron-sulfur binding	probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) Code: C; COG: COG1143	formate hydrogenlyase complex iron-sulfur protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein	Hydrogenase 4 Fe-S subunit	Putative uncharacterized protein	Formate hydrogenlyase, subunit F	4Fe-4S ferredoxin iron-sulfur binding domain protein	Formate hydrogenlyase complex iron-sulfur protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein	Formate hydrogenlyase, subunit F	4Fe-4S ferredoxin iron-sulfur binding domain protein	Formate hydrogenlyase, subunit F	Putative uncharacterized protein	
ECOLI02628	Formate hydrogenlyase subunit 5	Formate hydrogenlyase subunit 5	Formate hydrogenlyase subunit 5	Large subunit of hydrogenase 3	Residues 8 to 576 of 576 are 99 pct identical to residues 1 to 569 of a 569 aa protein from Escherichia coli O157:H7 ref: NP_311604.1 hydrogenase 3 large subunit	IPR001135: NADH-ubiquinone oxidoreductase, chain 49kDa; IPR001268: NADH dehydrogenase (ubiquinone), 30 kDa subunit Formate hydrogenlyase subunit 5 precursor	similar to Salmonella typhi CT18 formate hydrogenlyase subunit 5 formate hydrogenlyase subunit 5	Hydrogenase 3, large subunit	(part of FHL complex); Code: C; COG: COG3261 large subunit of hydrogenase 3	part of FHL complex; Code: C; COG: COG3261 large subunit of hydrogenase 3	part of FHL complex; Code: C; COG: COG3261 large subunit of hydrogenase 3	Formate hydrogenase-3 component E	Formate hydrogenlyase subunit 5	large subunit of hydrogenase 3 (part of FHL complex) Code: C; COG: COG3261	hydrogenase 3, large subunit	NADH dehydrogenase (Ubiquinone), 30 kDa subunit	Hydrogenase 3, large subunit	Putative uncharacterized protein	Formate hydrogenlyase, subunit E	NADH dehydrogenase (Ubiquinone) 30 kDa subunit	Hydrogenase 3, large subunit	Formate hydrogenlyase, subunit E	NADH dehydrogenase (Ubiquinone) 30 kDa subunit	Formate hydrogenlyase, subunit E	Putative uncharacterized protein	NADH-ubiquinone oxidoreductase chain 49kDa PFAM: NADH-ubiquinone oxidoreductase chain 49kDa KEGG: rrs:RoseRS_2672 NADH-ubiquinone oxidoreductase, chain 49kDa	Putative uncharacterized protein	Putative uncharacterized protein	Formate hydrogenlyase, subunit E	
ECOLI02629	Formate hydrogenlyase subunit 4	Formate hydrogenlyase subunit 4	Formate hydrogenlyase subunit 4	Membrane-spanning protein of hydrogenase 3	Residues 1 to 307 of 307 are 99 pct identical to residues 1 to 307 of a 307 aa protein from Escherichia coli K12 ref: NP_417202.1 membrane-spanning protein of hydrogenase 3 (part of FHL complex)	IPR001694: Respiratory-chain NADH dehydrogenase, subunit 1 hydrogenase 3, membrane subunit (part of FHL complex)	similar to Salmonella typhi CT18 formate hydrogenlyase subunit 4 formate hydrogenlyase subunit 4	Hydrogenase 3, membrane subunit	Code: C; COG: COG0650 membrane-spanning protein of hydrogenase 3 (part of FHL complex)	part of FHL complex; Code: C; COG: COG0650 membrane-spanning protein of hydrogenase 3	part of FHL complex; Code: C; COG: COG0650 membrane-spanning protein of hydrogenase 3	Formate hydrogenlyase subunit 4	Membrane-spanning protein of formate hydrogenase	respiratory-chain NADH dehydrogenase, subunit 1 KEGG: rpc:RPC_0930 respiratory-chain NADH dehydrogenase, subunit 1	respiratory-chain NADH dehydrogenase, subunit 1 PFAM: respiratory-chain NADH dehydrogenase, subunit 1 KEGG: rru:Rru_A0317 respiratory-chain NADH dehydrogenase, subunit 1	Hypothetical protein	membrane-spanning protein of hydrogenase 3 (part of FHL complex) Code: C; COG: COG0650	membrane-spanning protein of formate hydrogenase	Respiratory-chain NADH dehydrogenase, subunit 1 precursor	Hydrogenase 3, membrane subunit	Putative uncharacterized protein	Formate hydrogenlyase, subunit D	Respiratory-chain NADH dehydrogenase subunit 1 precursor	Hydrogenase 3, membrane subunit	Formate hydrogenlyase, subunit D	Respiratory-chain NADH dehydrogenase subunit 1	Formate hydrogenlyase, subunit D	Putative uncharacterized protein	Formate hydrogenlyase subunit 4-like protein	
ECOLI02630	Formate hydrogenlyase subunit 3	NADH dehydrogenase, putative	Formate hydrogenlyase subunit 3	Formate hydrogenlyase subunit 3	PMID: 1470679 best DB hits: BLAST: embl:CAC14149.1; (AJ245399) putative NADH-ubiquinone; E=9e-90 gb:AAG19078.1; (AE005006) Vng0560c [Halobacterium sp.  NRC-1]; E=2e-47 ddbj:BAB05035.1; (AP001511) Na+H+ antiporter [Bacillus; E=3e-26 COG: VNG0560C; COG0651 Formate hydrogenlyase subunit 3; E=2e-48 BH1319_1; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=1e-21 PH1452; COG0651 Formate hydrogenlyase subunit 3; E=6e-21 PFAM: PF00361; NADH-Ubiquinone/plastoquinone (co; E=1.4e-36 putative NADH-ubiquinone oxidoreductase subunit	Membrane-spanning protein of hydrogenase 3	SCD39.06, nuoL2, NADH dehydrogenase subunit, len: 664 aa; similar to SW:NU5C_SYNP2 (EMBL:M99378) Synechococcus sp. NADH-plastoquinone oxidoreductase chain 5 (EC 1.6.5.3) NdhF, 664 aa; fasta scores: opt: 997 z-score: 1098.6 E(): 0; 33.7% identity in 701 aa overlap and to TR:Q9XAR5 (EMBL:AL078618) Streptomyces coelicolor SCD16A.10c, NuoL, NADH dehydrogenase subunit, 654 aa; fasta scores: opt: 902 z-score: 801.3 E(): 0; 33.3% identity in 681 aa overlap. Contains Pfam matches to entries PF00662 oxidored_q1_N, NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus and PF00361 oxidored_q1, NADH-Ubiquinone/plastoquinone (complex I), various chains. Also contains possible hydrophobic membrane spanning regions NADH dehydrogenase subunit NuoL2	Residues 1 to 561 of 561 are 96 pct identical to residues 60 to 608 of a 608 aa protein from Escherichia coli K12 ref: NP_417203.1 membrane-spanning protein of hydrogenase 3 (part of FHL complex)	Uncharacterized protein Rv0083/MT0090	IPR001750: NADH/Ubiquinone/plastoquinone (complex I); IPR003918: NADH-ubiquinone oxidoreductase, chain 4 hydrogenase 3, membrane subunit (part of FHL complex)	similar to Salmonella typhi CT18 formate hydrogenlyase subunit 3 formate hydrogenlyase subunit 3	Hydrogenase 3, membrane subunit	part of FHL complex; Code: CP; COG: COG0651 membrane-spanning protein of hydrogenase 3	NADH/Ubiquinone/plastoquinone (complex I)	part of FHL complex; Code: CP; COG: COG0651 membrane-spanning protein of hydrogenase 3	Formate hydrogenase-3 component C	NADH dehydrogenase (quinone)	Putative NADH-quinone oxidoreductase	Formate hydrogenlyase subunit 3	NADH dehydrogenase (quinone) PFAM: NADH/Ubiquinone/plastoquinone (complex I) KEGG: gsu:GSU0734 NAD-dependent dehydrogenase subunit	hypothetical protein similar to oxidoreductase Mapped to H37Rv Rv0083	Probable oxidoreductase	Hypothetical protein	membrane-spanning protein of hydrogenase 3 (part of FHL complex) Code: CP; COG: COG0651	NADH dehydrogenase subunit N	NADH dehydrogenase	Putative NADH-ubiquinone oxidoreductase	NADH dehydrogenase	NADH/Ubiquinone/plastoquinone	
ECOLI02631	Formate hydrogenlyase subunit 2	Formate hydrogenlyase subunit 2	Formate hydrogenlyase subunit 2	Probable small subunit of hydrogenase-3, iron- sulfur protein (Part of formate hydrogenlyase	Residues 1 to 203 of 203 are 99 pct identical to residues 1 to 203 of a 203 aa protein from Escherichia coli K12 ref: NP_417204.1 probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex)	IPR000345: Cytochrome c heme-binding site; IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain hydrogenase-3, iron-sulfur subunit (part of FHL complex)	similar to Salmonella typhi CT18 formate hydrogenlyase subunit 2 formate hydrogenlyase subunit 2	Hydrogenase-3, iron-sulfur subunit	part of formate hydrogenlyase (FHL) complex; Code: C; COG: COG1142 probable small subunit of hydrogenase-3, iron-sulfur protein	part of formate hydrogenlyase (FHL) complex; Code: C; COG: COG1142 probable small subunit of hydrogenase-3, iron-sulfur protein	Formate hydrogenase-3 component B	Formate hydrogenlyase subunit 2	probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) Code: C; COG: COG1142	hydrogenase 3, Fe-S subunit	4Fe-4S ferredoxin, iron-sulfur binding domain protein	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: gur:Gura_1944 4Fe-4S ferredoxin, iron-sulfur binding domain protein 4Fe-4S ferredoxin iron-sulfur binding domain protein	Hydrogenase-3, Fe-S subunit	Putative uncharacterized protein	Formate hydrogenlyase, subunit B	4Fe-4S ferredoxin iron-sulfur binding domain protein	Hydrogenase 3, Fe-S subunit	Formate hydrogenlyase, subunit B	4Fe-4S ferredoxin iron-sulfur binding domain protein precursor	Formate hydrogenlyase, subunit B	Putative uncharacterized protein	4Fe-4S ferredoxin iron-sulfur binding domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Formate hydrogenlyase, subunit B	
ECOLI02632	Formate hydrogenlyase regulatory protein hycA	Formate hydrogenlyase Regulatory protein hycA	Formate hydrogenlyase regulatory protein hycA	Residues 1 to 153 of 153 are 100 pct identical to residues 1 to 153 of a 153 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289274.1 transcriptional repression of hyc and hyp operons	transcriptional repressor of hyc and hyp operons	similar to Salmonella typhi CT18 formate hydrogenlyase regulatory protein formate hydrogenlyase regulatory protein	Transcriptional repressor of hyc and hyp operons	transcriptional repression of hyc and hyp operons	transcriptional repression of hyc and hyp operons	Formate hydrogenlyase regulatory protein HycA	Transcriptional repressor of hyc and hyp operons	transcriptional repression of hyc and hyp operons	transcriptional repressor of hyc and hyp operons	Transcriptional repressor of hyc and hyp operons	HycE regulatory protein	Putative uncharacterized protein	Formate hydrogenlyase regulatory protein HycA	Transcriptional repressor	Regulator of the transcriptional regulator FhlA	Formate hydrogenlyase regulatory protein HycA	Transcriptional repression of hyc and hyp operons	Formate hydrogenlyase regulatory protein HycA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Formate hydrogenlyase regulatory protein HycA	Formate hydrogenlyase regulatory protein	Formate hydrogenlyase regulatory protein	Formate hydrogenlyase regulatory protein	
ECOLI02633	Protein hypA	Probable hydrogenase nickel incorporation protein hypA	Probable hydrogenase nickel incorporation protein hypA	Probable hydrogenase nickel incorporation protein hypA	Protein hypA	Protein hypA	Probable hydrogenase nickel incorporation protein hypA	Protein hypA	Residues 5 to 120 of 120 are 100 pct identical to residues 1 to 116 of a 116 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289276.1 pleiotrophic effects on 3 hydrogenase isozymes	identified by similarity to SP:P24189; match to protein family HMM PF01155; match to protein family HMM TIGR00100 hydrogenase nickel insertion protein HypA	IPR000688: Hydrogenase expression/synthesis, HypA family guanine-nucleotide binding protein in formate-hydrogenlyase system, functions as nickel donor for HycE of hydrogenlyase 3	similar to Salmonella typhi CT18 HypA protein HypA protein	Protein hypA	pleiotrophic effects on 3 hydrogenase isozymes; Code: R; COG: COG0375 HypA	pleiotrophic effects on 3 hydrogenase isozymes; Code: R; COG: COG0375 HypA	hydrogenase nickel insertion protein HypA identified by match to protein family HMM PF01155; match to protein family HMM TIGR00100	Hydrogenase expression/synthesis, HypA	Code: R; COG: COG0375 pleiotrophic effects on 3 hydrogenase isozymes	Guanine-nucleotide binding protein in formate- hydrogenlyase system	HypA protein	hydrogenase nickel insertion protein HypA TIGRFAM: hydrogenase nickel insertion protein HypA PFAM: hydrogenase expression/synthesis, HypA KEGG: tbd:Tbd_1382 hydrogenase expression/formation protein HypA	Putative hydrogenase nickel incorporation protein	hydrogenase nickel insertion protein HypA identified by match to protein family HMM PF01155; match to protein family HMM TIGR00100	HypA pleiotrophic effects on 3 hydrogenase isozymes; Code: R; COG: COG0375	Hydrogenase nickel insertion protein HypA	protein involved in nickel insertion into hydrogenases 3	Hydrogenase expression/formation protein HupA	Hydrogenase nickel insertion protein HypA	Hydrogenase nickel insertion protein HypA	
ECOLI02634	Hydrogenase isoenzymes nickel incorporation protein hypB	Probable hydrogenase nickel incorporation protein hypB	Hydrogenase accessory protein HypB	Hydrogenase expression/formation protein	Probable hydrogenase nickel incorporation protein hypB	Hydrogenase expression/formation protein	Hydrogenase expression/formation protein HypB	Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase	Hydrogenase accessory protein HypB	Putative [NiFe] hydrogenase expression/formation protein	ATP/GTP-binding site motif A (P-loop):HypB/UreG, nucleotide-binding:Hydrogenase accessory protein HypB	Hydrogenase isoenzymes formation protein	Hydrogenase expression/formation HypB-related protein	Hydrogenase isoenzymes formation protein HypB	Hydrogenase expression/formation protein	Hydrogenase isoenzymes nickel incorporation protein hypB	Hydrogenase accessory protein HypB	Hydrogenase accessory protein HypB	Hydrogenase isoenzymes nickel incorporation protein	Hydrogenase/urease nickel incorporation protein hypB	Guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3	Hydrogenase accessory protein HypB	Hydrogenase expression/formation protein hypB	Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase	Residues 1 to 290 of 290 are 99 pct identical to residues 1 to 290 of a 290 aa protein from Escherichia coli K12 ref: NP_417207.1 guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3	hydrogenase nickel incorporation protein HypB	conserved gene hydrogenase expression/formation protein HypB	hydrogenase nickel incorporation protein HypB	hydrogenase isoenzymes formation protein HypB	
ECOLI02635	Hydrogenase isoenzymes formation protein hypC	Hydrogenase expression/formation protein	Hydrogenase expression/formation protein HypC	Hydrogenase maturation factor	HypC hydrogenase expression/formation protein	Hydrogenase expression/formation protein	Hydrogenase isoenzymes formation protein HypC	Hydrogenase isoenzymes formation protein hypC	Hydrogenase isoenzymes formation protein	Hydrogenase expression/formation protein	Hydrogenase isoenzymes formation protein hypC	Residues 1 to 90 of 90 are 100 pct identical to residues 1 to 90 of a 90 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289278.1 pleiotrophic effects on 3 hydrogenase isozymes	IPR001109: Hydrogenase expression/formation protein (HUPF/HYPC) putative hydrogenase expression/formation protein	similar to Salmonella typhi CT18 hydrogenase isoenzymes formation protein HypC hydrogenase isoenzymes formation protein HypC	Hydrogenase expression/formation protein hypC	Hydrogenase expression/formation protein	Putative hydrogenase expression/formation protein	HypC hydrogenase expression/formation protein	Code: O; COG: COG0298 pleiotrophic effects on 3 hydrogenase isozymes	pleiotrophic effects on 3 hydrogenase isozymes; Code: O; COG: COG0298 HypC	hydrogenase expression/formation protein (HUPF/HYPC)	hydrogenase assembly chaperone hypC/hupF	hypothetical protein related to hydrogenase maturation/formation protein HypC	hydrogenase assembly chaperone HypC/HupF TIGRFAMsMatches:TIGR00074	Code: O; COG: COG0298 pleiotrophic effects on 3 hydrogenase isozymes	Hydrogenase isoenzymes formation protein HypC	hydrogenase expression/formation protein HypC	Hydrogenase isoenzymes formation protein HypC	hydrogenase expression/formation protein (P31900) Hydrogenase expression/formation protein hypC Function unclear	
ECOLI02636	Hydrogenase isoenzymes formation protein hypD	Hydrogenase expression/formation protein	Hydrogenase expression/formation protein HypD	Hydrogenase expression/formation protein	Hydrogenase isoenzymes formation protein; HypD	Hydrogenase expression/formation protein	Hydrogenase expression/formation protein HypD	Hydrogenase maturation factor	367aa long hypothetical hydrogenase expression/formation protein hypD	Hydrogenase expression/formation protein HypD	Putative [NiFe] hydrogenase expression/formation protein	Hydrogenase expression/formation protein	HypD hydrogenase expression/formation protein	Hydrogenase expression/formation protein	Hydrogenase isoenzymes formation protein	Hydrogenase isoenzymes formation protein HypD	Hydrogenase expression/formation protein	Probable hydrogenase accessory protein HypD	Hydrogenase isoenzymes formation protein hypD	Hydrogenase expression/formation protein HypD	Hydrogenase isoenzymes formation protein	HYDROGENASE PROTEIN	Hydrogenase expression/formation protein	Hydrogenase isoenzymes formation protein	Pleiotrophic effects on 3 hydrogenase isozymes	Hydrogenase expression-formation factor	Hydrogenase maturation factor	Residues 1 to 373 of 373 are 99 pct identical to residues 1 to 373 of a 373 aa protein from Escherichia coli K12 ref: NP_417209.1 pleiotrophic effects on 3 hydrogenase isozymes	hydrogenase expression/formation protein hypD	
ECOLI02637	Hydrogenase isoenzymes formation protein hypE	Putative hydrogenase expression/formation protein MJ0676	Hydrogenase expression/formation protein	Hydrogenase expression/formation protein HypE	Hydrogenase expression/formation protein	Hydrogenase expression/formation protein	Hydrogenase maturation factor	336aa long hypothetical hydrogenase expression/formation protein	Hydrogenase expression/formation protein HypE	Putative [NiFe] hydrogenase expression/formation protein	Hydrogenase expression/formation protein	Hydrogenase expression/formation protein	HypE hydrogenase expression/formation protein	Hydrogenase isoenzymes formation protein	Hydrogenase isoenzymes formation protein HypE	Hydrogenase expression/formation protein	Probable hydrogenase accessory protein HypE	Hydrogenase isoenzymes formation protein hypE	Hydrogenase expression/formation protein HypE	Hydrogenase expression/formation protein HypE	Hydrogenase isoenzymes formation protein	HYDROGENASE EXPRESSION/FORMATION PROTEIN	Hydrogenase expression/formation protein	Hydrogenase expression/formation protein HypE	Plays structural role in maturation of all 3 hydrogenases	Hydrogenase formation factor	Hydrogenase maturation factor	Residues 15 to 336 of 336 are 99 pct identical to residues 1 to 322 of a 322 aa protein from Escherichia coli O157:H7 ref: NP_311613.1 HypE protein	hydrogenase expression/formation protein HypE	
ECOLI02638	Formate hydrogenlyase transcriptional activator	Formate hydrogenlyase transcriptional activator	Hydrogenase-4 transcriptional activator	Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons	Residues 13 to 704 of 704 are 99 pct identical to residues 1 to 692 of a 692 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289281.1 formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons	IPR002078: Sigma-54 factor interaction domain; IPR002197: Helix-turn-helix, Fis-type; IPR003018: GAF domain;IPR003593: AAA ATPase formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons (EBP family)	similar to Salmonella typhi CT18 transcriptional activator of the formate hydrogenlyase system transcriptional activator of the formate hydrogenlyase system	Formate hydrogenlyase transcriptional activator	Code: KT; COG: COG3604 formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons	Formate hydrogenlyase transcriptional activator	Formate hydrogenlyase transcriptional activator	transcriptional regulator, NifA subfamily, Fis Family PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5 SMART: AAA ATPase KEGG: rru:Rru_A0326 transcriptional regulator, NifA subfamily, fis family	transcriptional regulator, Fis family PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type SMART: AAA ATPase KEGG: son:SO3059 formate hydrogenlyase transcriptional activator, putative	Putative hydrogenlyase transcriptional activator	Formate hydrogenlyase transcriptional activator Code: KT; COG: COG3604	formate hydrogenlyase transcriptional activator	Transcriptional regulator, NifA subfamily, Fis Family	Formate hydrogen-lyase transcriptional activator	Putative uncharacterized protein	Formate hydrogenlyase transcriptional activator	DNA-binding transcriptional activator	Formate hydrogenlyase transcriptional activator	Transcriptional regulator, NifA subfamily, Fis Family	Formate hydrogenlyase transcriptional activator	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Transcriptional activator of the formate hydrogenlyase system	Formate hydrogenlyase transcriptional activator	
ECOLI02639	Uncharacterized protein ygbA	Putative uncharacterized protein CPE0229	Putative uncharacterized protein VVA0912	Putative uncharacterized protein STY2982	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein ygbA	Putative uncharacterized protein	Putative uncharacterized protein ygbA	Putative uncharacterized protein	Predicted amidophosphoribosyltransferase	Residues 1 to 117 of 117 are 99 pct identical to residues 1 to 117 of a 117 aa protein from Escherichia coli K12 ref: NP_417212.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	conserved hypothetical protein	Similar, although shoreter in its C-terminal region, to Clostridium perfringens hypothetical protein CPE0229 SWALL:Q8XNV3 (EMBL:AP003185) (99 aa) fasta scores: E(): 3.5e-20, 56.25% id in 96 aa, and to Escherichia coli O6 hypothetical protein YgbA or C3293 SWALL:Q8FEL4 (EMBL:AE016765) (114 aa) fasta scores: E(): 1.1e-14, 47.42% id in 97 aa conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein identified by similarity to GB:AAO79602.1	hypothetical protein	conserved hypothetical protein identified by similarity to GB:AAO79602.1	Putative uncharacterized protein ygbA	hypothetical cytosolic protein	conserved hypothetical protein	conserved hypothetical protein KEGG: sfr:Sfri_0404 hypothetical protein	
ECOLI02640	DNA mismatch repair protein mutS	conserved hypothetical protein;	DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA, has ATPase activity and binds to DNA mismatches; has homology to E. coli MutS; transcription is induced during meiosis.  [Source:SGD;Acc:S000001162]	similar to sp|O13396 Neurospora crassa MSH-2 DNA mismatch repair protein MSH2, start by similarity	DNA mismatch repair protein mutS	MutS protein homolog 1 [Source:GeneDB_Spombe;Acc:SPAC13F5.01c]	similar to sp|P25846 Saccharomyces cerevisiae YHR120w MSH1 DNA mismatch repair protein, mitochondrial, hypothetical start	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	similar to uniprot|P25846 Saccharomyces cerevisiae YHR120w MSH1;	DNA mismatch repair protein mutS 2	DEHA2F20856p;similar to uniprot|P25846 Saccharomyces cerevisiae YHR120W MSH1 DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA;	similar to GB:X14894, SP:P13349,  and PID:34836; identified by sequence similarity; putative DNA mismatch repair protein MutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	DNA mismatch repair protein mutS	
ECOLI02641	Serine/threonine-protein phosphatase 2	Serine/threonine protein phosphatase 2	Protein phosphatase 2	IPR004843: Metallo-phosphoesterase; IPR006186: Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase serine/threonine specific protein phosphatase 2	Serine/threonine-protein phosphatase 2	Code: T; COG: COG0639 protein phosphatase 2	Serine/threonine protein phosphatase 2	serine/threonine-specific protein phosphatase 2	Metallophosphoesterase	Serine/threonine protein phosphatase 2	Serine/threonine-specific protein phosphatase 2	Serine/threonine protein phosphatase 2	Serine/threonine-protein phosphatase 2	Putative uncharacterized protein	Metallophosphoesterase	pseudo	Serine/threonine-protein phosphatase 2	Serine/threonine-protein phosphatase 2	Serine/threonine-protein phosphatase 2	Possible serine/threonine protein phosphatase	Serine/threonine-protein phosphatase 2	Serine/threonine-protein phosphatase 2	Serine/threonine-protein phosphatase 2	Possible serine/threonine protein phosphatase	Phosphatase	Serine/threonine-specific protein phosphatase 2	Serine/threonine-specific protein phosphatase 2	Serine/threonine-specific protein phosphatase 2	Serine/threonine-specific protein phosphatase 2	
ECOLI02642	Uncharacterized HTH-type transcriptional regulator ygbI	Putative uncharacterized protein	DeoR-family trancriptional regulator	Hypothetical transcriptional regulator ygbI	DeoR-family trancriptional regulator	DeoR-family transcriptional regulator	Transcriptional regulator, DeoR family	Residues 1 to 265 of 265 are 98 pct identical to residues 1 to 265 of a 265 aa protein from Escherichia coli K12 ref: NP_417215.1 putative DEOR-type transcriptional regulator	Probable deoR-family transcriptional regulatory protein	IPR001034: Bacterial regulatory protein, DeoR family putative regulatory protein, deoR family	similar to Salmonella typhi CT18 DeoR-family trancriptional regulator DeoR-family trancriptional regulator	Probable deoR-family transcriptional regulatory protein	Putative regulatory protein, deoR family	identified by match to protein family HMM PF00455 transcriptional regulator, DeoR family	identified by match to protein family HMM PF00455 transcriptional regulator, DeoR family	regulatory protein, DeoR	regulatory protein, DeoR	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	similar to gi|27467388|ref|NP_764025.1| [Staphylococcus epidermidis ATCC 12228], percent identity 65 in 250 aa, BLASTP E(): 8e-92 transcription repressor of fructose operon	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	Putative regulatory protein, DeoR family	DeoR-family transcriptional regulatory protein	transcription repressor of fructose operon fruR identified by match to protein family HMM PF00455; match to protein family HMM PF08220	Hypothetical transcriptional regulator YgbI	transcriptional regulator, DeoR family identified by match to protein family HMM PF00455; match to protein family HMM PF08220	Probable deoR-family transcriptional regulatory protein	putative DEOR-type transcriptional regulator Code: KG; COG: COG1349	DeoR-family transcriptional regulatory protein	putative transcriptional regulator YgbI	
ECOLI02643	Uncharacterized oxidoreductase ygbJ	Uncharacterized oxidoreductase HI1010	Putative uncharacterized protein	Putative dehydrogenase/oxidoreductase protein	Hypothetical oxidoreductase ygbJ	Putative oxidoreductase	PMID: 1339433 best DB hits: BLAST: swissprot:P44979; YGBJ_HAEIN HYPOTHETICAL PROTEIN HI1010 -----; E=3e-48 gb:AAK03450.1; (AE006174) unknown [Pasteurella multocida]; E=8e-47 gb:AAF25989.1; AC013354_8 (AC013354) F15H18.21 [Arabidopsis; E=6e-46 COG: HI1010; COG2084 3-hydroxyisobutyrate dehydrogenase and related; E=3e-49 PFAM: PF01089; Delta 1-pyrroline-5-carboxylate; E=0.035 PF02737; 3-hydroxyacyl-CoA dehydrogenase,; E=0.00065 PF02254; KTN NAD-binding domain; E=8.4e-05 3-hydroxyisobutyrate dehydrogenase	Product confidence : hypothetical Gene name confidence : hypothetical conserved hypothetical protein	2-hydroxy-3-oxopropionate reductase	D-BETA-HYDROXYBUTYRATE DEHYDROGENASE	similar to Escherichia coli K12 putative dehydrogenase  gi: 1789092 (303 aa). BLAST with identity of 99% in 303 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Similar to hypothetical oxidoreductase YgbJ of Escherichia coli	3-hydroxyisobutyrate dehydrogenase protein	IPR002204: 3-hydroxyisobutyrate dehydrogenase 3-hydroxyisobutyrate dehydrogenase	similar to Salmonella typhimurium 3-hydroxyisobutyrate dehydrogenase 3-hydroxyisobutyrate dehydrogenase	LmjF25.1020, predicted protein, len = 432 aa, possibly dehydrogenase; predicted pI = 5.8225; reasonable similarity to several putative dehydrogenases; contains a weak hit to a NAD binding domain of 6-phosphogluconate dehydrogenase pfam domain dehydrogenase-like protein	3-hydroxyisobutyrate dehydrogenase and related proteins MmsB protein	3-hydroxyisobutyrate dehydrogenase	oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor	Code: I; COG: COG2084 putative dehydrogenase	pseudo D-beta-hydroxybutyrate dehydrogenase	Code: I; COG: COG2084 putative dehydrogenase	3-hydroxyisobutyrate dehydrogenase	3-hydroxyisobutyrate dehydrogenase	3-hydroxyisobutyrate dehydrogenase precursor	NAD binding domain of 6-phosphogluconate dehydrogenase family identified by match to protein family HMM PF03446	putative 3-hydroxyisobutyrate dehydrogenase protein Similar to HI1010 [Haemophilus influenzae Rd], blr2928 [Bradyrhizobium japonicum] and mmsB (RB13140)[Pirellula sp.] Similar to entrez-protein:P44979 Putative location:bacterial inner membrane Psort-Score: 0.1468; go_function: oxidoreductase activity [goid 0016491]; go_function: phosphogluconate dehydrogenase (decarboxylating) activity [goid 0004616]; go_function: 3-hydroxyisobutyrate dehydrogenase activity [goid 0008442]; go_process: pentose-phosphate shunt [goid 0006098]	Hypothetical oxidoreductase YgbJ	6-phosphogluconate dehydrogenase, NAD-binding	
ECOLI02644	Uncharacterized protein ygbK	Uncharacterized protein HI1011	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein ygbK	similar to GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, and PID:386807; identified by sequence similarity; putative conserved hypothetical protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical conserved hypothetical protein	HopAN1 protein	Putative uncharacterized protein	Hypothetical pyridoxal phosphate biosynthesis protein	Putative uncharacterized protein	Similar to unknown protein YgbK of Escherichia coli	identified by match to protein family HMM PF07005 ygbK domain protein	Putative uncharacterized protein	paral putative tRNA synthase	similar to |32470068|ref|NP_863010.1| putative protein [Escherichia coli] hypothetical protein	similar to BRA0148, conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Uncharacterized BCR Hypothetical protein	Putative tRNA synthase	identified by match to protein family HMM PF07005 type III effector HopAN1	identified by match to protein family HMM PF07005 candidate type III effector Hop protein	Type III effector Hrp-dependent outers	Type III effector Hrp-dependent outers	Code: S; COG: COG3395 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3395 conserved hypothetical protein	type III effector Hrp-dependent outers	
ECOLI02645	Putative aldolase class 2 protein ygbL	L-fuculose phosphate aldolase	Putative aldolase class 2 protein HI1012	Fuculose-1-phosphate aldolase	Predicted epimerase related to ribulose-5- phosphate 4-epimerase	189aa long hypothetical L-fuculose phosphate aldolase	Methylthioribulose-1-phosphate dehydratase	L-ribulose-5-phosphate 4-epimerase	Putative uncharacterized protein	Possible sugar aldolase	L-fuculose-1-phosphate aldolase	Putative L-fuculose phosphate aldolase	Hypothetical aldolase class II protein ygbL	identified by match to TIGR protein family HMM TIGR00760 class II aldolase/adducin domain protein	Putative sugar aldolase	best DB hits: BLAST: pir:C75206; L-fuculose-phosphate aldolase (EC 4.1.2.17) - Pyrococcus; E=3e-18 pir:E71241; L-fuculose-phosphate aldolase (EC 4.1.2.17) - Pyrococcus; E=5e-18 gb:AAK03448.1; (AE006174) unknown [Pasteurella multocida]; E=2e-16 COG: PAB0117; COG0235 Ribulose-5-phosphate 4-epimerase and related; E=2e-19 PFAM: PF00596; Class II Aldolase and Adducin N-t; E=2.4e-21 L-fuculose-phosphate aldolase	Product confidence : putative Gene name confidence : hypothetical putative aldolase, possibly L-fuculose-phosphate aldolase protein	Class II aldolase/adducin domain protein	Class II aldolase/adducin domain protein	L-FUCULOSE PHOSPHATE ALDOLASE	CDS_ID OB3254 L-fuculose-phosphate aldolase	Putative class II aldolase-family protein	Similar to hypothetical aldolase class II protein YgbL of Escherichia coli	identified by similarity to SP:P11550; match to protein family HMM PF00596 L-fuculose phosphate aldolase	L-fuculose-phosphate aldolase protein	L-fuculose phosphate aldolase	IPR001303: Class II aldolase/adducin, N-terminal putative fuculose phosphate aldolase	similar to Salmonella typhi CT18 possible sugar aldolase possible sugar aldolase	similar to BRA0144, class II aldolase/adducin domain protein class II aldolase/adducin domain protein	
ECOLI02646	Protein ygbM	Uncharacterized protein HI1013	Putative uncharacterized protein	Putative uncharacterized protein	Putative hydroxypyruvate isomerase	Hydroxypyruvate isomerase	Putative hydroxypyruvate isomerase	Hypothetical protein ygbM	similar to GP:10197687, GB:J03799, GB:X15005, GB:S37431, GB:M14199, GB:X61156, GB:U36484, SP:P08865, PID:1125065, PID:34272, and PID:386857; identified by sequence similarity; putative hydroxypyruvate isomerase, putative	Putative isomerase	Product confidence : hypothetical Gene name confidence : hypothetical conserved hypothetical protein, possibly hydroxypyruvate isomerase	Hydroxypyruvate isomerase, putative	Putative exported protein	Hydroxypyruvate isomerase	HYDROXYPYRUVATE ISOMERASE	similar to L36817-2|AAC41420.1| percent identity: 42 in 250 aa conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative hydroxypyruvate isomerase , xylose isomerase-like tim barrel; protein	Similar to unknown protein YgbM of Escherichia coli	identified by similarity to SP:P30147 hydroxypyruvate isomerase, putative	Hydroxypyruvate isomerase protein	putative endonuclease	putative hydroxypyruvate isomerase homolog	similar to BRA0147, hydroxypyruvate isomerase, hypothetical hydroxypyruvate isomerase, hypothetical	Putative uncharacterized protein	Hydroxypyruvate isomerase Hfi protein	Putative endonuclease	identified by similarity to SP:P30147 hydroxypyruvate isomerase, putative	
ECOLI02647	Inner membrane permease ygbN	Gluconate permease	Gluconate transporter family protein	Putative membrane transport protein	identified by match to protein family HMM PF02447; match to protein family HMM TIGR00791 gluconate transporter family protein	identified by match to protein family HMM PF02447; match to protein family HMM TIGR00791 gluconate transporter family protein	Gluconate transporter	Code: GE; COG: COG2610 putative transport protein	Code: GE; COG: COG2610 putative transport protein	Hypothetical permease YgbN	gluconate transporter TIGRFAM: gluconate transporter PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit KEGG: eca:ECA4331 gluconate permease	gluconate permease 12 TMHs	conserved hypothetical protein putative Zn-dependent hydrolase	Putative gluconate transporter	Putative transport protein	Gluconate transporter	Transporter, gluconate:H+ symporter (GntP) family	Gluconate transporter precursor	Gluconate transporter	Predicted transporter	Transporter, gluconate:H+ symporter (GntP) family	Gluconate transporter precursor	Transporter, gluconate:H+ symporter (GntP) family	Gluconate permease	Transporter, gluconate:H+ symporter (GntP) family	Putative transport protein	Gluconate transporter	Putative transporter	Putative transporter	
ECOLI02648	RNA polymerase sigma factor rpoS	RNA polymerase sigma factor	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor rpoS	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor	RNA polymerase sigma factor rpoS	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor	RNA polymerase sigma factor RpoD	RNA polymerase sigma factor	RpoD protein	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor rpoS	RNA polymerase sigma-38 factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	PMID: 11466270 best DB hits: BLAST: gb:AAF20816.1; AF198628_2 (AF198628) RpoS [Xenorhabdus; E=7e-48 gb:AAG14981.1; AF242209_6 (AF242209) alternative sigma factor; E=3e-47 gb:AAG53883.1; AF275947_2 (AF275947) sigma factor RpoS; E=3e-47 COG: VC0534; COG0568 DNA-directed RNA polymerase sigma subunits; E=8e-48 PFAM: PF00140; Sigma-70 factor; E=1.3e-77 RNA polymerase sigma factor rpoS	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase principal sigma factor HrdD	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor sigB	RNA polymerase sigma factor	
ECOLI02649	Lipoprotein nlpD	Lipoprotein nlpD	Lipoprotein nlpD	Putative cell wall degradation lipoprotein	Lipoprotein	Residues 1 to 329 of 329 are 100 pct identical to residues 51 to 379 of a 379 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289291.1 lipoprotein	NlpD	Lipoprotein NlpD	identified by match to protein family HMM PF01476; match to protein family HMM PF01551 LysM domain/M23/M37 peptidase	Probable lipoprotein nlpD	Lipoprotein NlpD	IPR002482: Peptidoglycan-binding LysM; IPR002886: Peptidase M23/M37 lipoprotein	similar to Salmonella typhi CT18 lipoprotein NlpD precursor lipoprotein NlpD precursor	Lipoprotein	Similar to: HI0706, LPPB_HAEIN outer membrane antigenic lipoprotein B	Lipoprotein nlpD	lipoprotein	ortholog to Escherichia coli bnum: b2742; MultiFun: Cell structure 6.1 lipoprotein NlpD precursor	Code: M; COG: COG0739 lipoprotein	Code: M; COG: COG0739 lipoprotein	peptidase M23B	peptidoglycan-binding protein LysM	peptidase M23B	lipoprotein	peptidase M23B	Code: M; COG: COG0739 lipoprotein	Lipoprotein NlpD	Peptidase M23B	Lipoprotein	
ECOLI02650	Protein-L-isoaspartate O-methyltransferase	Probable protein-L-isoaspartate O-methyltransferase [Source:GeneDB_Spombe;Acc:SPAC869.08]	L-isoaspartyl protein carboxyl methyltransferase	Protein-L-isoaspartate O-methyltransferase	protein-L-isoaspartate O-methyltransferase beta- aspartate methyltransferase, putative	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase 1	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	putative L-isoaspartate protein carboxylmethyltransferase type II	L-isoaspartyl protein carboxyl methyltransferase	Protein-L-isoaspartate O-methyltransferase	protein-L-isoaspartate O-methyltransferase 1	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	Protein-L-isoaspartate O-methyltransferase	
ECOLI02651	Multifunctional protein surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE	5'-nucleotidase surE 1	5'-nucleotidase surE	Multifunctional protein surE	
ECOLI02652	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	Probable tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	hypothetical hydrogenase subunit	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	Residues 1 to 349 of 349 are 99 pct identical to residues 1 to 349 of a 349 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289294.1 putative hydrogenase subunit	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	tRNA pseudouridine synthase D	similar to conserved hypothetical proteins hypothetical protein	conserved gene hydrogenase	similar to conserved hypothetical proteins hypothetical protein	
ECOLI02653	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	identified by match to TIGR protein family HMM TIGR00151 hypothetical protein	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	
ECOLI02654	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	identified by match to PFAM protein family HMM PF02348 hypothetical protein	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	
ECOLI02655	Cell division protein ftsB	Cell division protein ftsB homolog	Cell division protein ftsB homolog	Cell division protein ftsB homolog	Cell division protein ftsB homolog	Putative uncharacterized protein	Cell division protein ftsB homolog	Cell division protein ftsB homolog	Putative membrane protein	conserved hypothetical protein	Cell division protein ftsB	Cell division protein ftsB	Cell division protein ftsB homolog	Cell division protein ftsB homolog	Cell division protein ftsB homolog	Cell division protein ftsB homolog	Putative uncharacterized protein	Cell division protein ftsB homolog	Septum formation initiator family protein	Cell division protein ftsB homolog	Cell division protein ftsB	Cell division protein	Cell division protein ftsB homolog	Residues 1 to 103 of 103 are 99 pct identical to residues 1 to 103 of a 103 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289297.1 orf, conserved hypothetical protein	Cell division protein ftsB homolog	Putative transmembrane protein	B2748 protein	Cell division protein ftsB homolog	Cell division protein ftsB homolog	
ECOLI02656	Inner membrane protein ygbE	Hypothetical protein ygbE	Putative membrane protein	Putative cytochrome oxidase subunit	Residues 1 to 107 of 107 are 99 pct identical to residues 1 to 107 of a 107 aa protein from Escherichia coli K12 ref: NP_417229.1 putative cytochrome oxidase subunit	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative membrane protein	Putative inner membrane protein	putative cytochrome oxidase subunit	putative cytochrome oxidase subunit	conserved hypothetical protein	putative cytochrome oxidase subunit	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein ygbE	Membrane protein	Putative membrane protein	putative cytochrome oxidase subunit	Membrane protein	conserved hypothetical protein	Putative cytochrome oxidase subunit	Putative cytochrome oxidase subunit	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Conserved inner membrane protein	Putative uncharacterized protein	
ECOLI02657	Adenylyl-sulfate kinase	adenylyl-sulfate kinase;	Adenylylsulfate kinase, required for sulfate assimilation and involved in methionine metabolism.  [Source:SGD;Acc:S000001484]	highly similar to tr|Q9C2Y6 Saccharomyces pastorianus MET14-CA Adenosine-5 -phosphosulfate kinase, start by similarity	Adenylyl-sulfate kinase [Source:GeneDB_Spombe;Acc:SPAC1782.11]	highly similar to sp|Q02196 Saccharomyces cerevisiae YKL001c MET14 ATP adenosine-5 -phosphosulfate 3 -phosphotransferase singleton, start by similarity	Probable adenylyl-sulfate kinase	Probable adenylyl-sulfate kinase	Probable adenylyl-sulfate kinase	highly similar to uniprot|Q02196 Saccharomyces cerevisiae YKL001c MET14 ATP adenosine-5 -phosphosulfate 3 -phosphotransferase;	DEHA2E12804p;highly similar to uniprot|Q02196 Saccharomyces cerevisiae YKL001C MET14 Adenylylsulfate kinase required for sulfate assimilation and involved in methionine metabolism;	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	putative adenylylsulfate kinase	Adenylyl-sulfate kinase	identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455 adenylylsulfate kinase	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	go_component: cell [goid 0005623]; go_function: adenylyl-sulfate kinase activity [goid 0004020]; go_process: sulfate assimilation [goid 0000103]; go_process: methionine metabolism [goid 0006555] adenylyl-sulfate kinase, putative	Adenylyl-sulfate kinase	Adenylyl-sulfate kinase	
ECOLI02658	Sulfate adenylyltransferase subunit 1	conserved hypothetical protein;	some similarities with sp|P32769 Saccharomyces cerevisiae YKR084c HBS1 translation elongation factor eEF-1 alpha chain homolog, hypothetical start	ATP sulfurylase/adenylylsulfate kinase	TRANSLATION ELONGATION FACTOR 1-ALPHA;06_1440, TRANSLATION ELONGATION FACTOR 1-ALPHA, EF1A_ENTHI, gene found by Glimmer [Shorter 152 950 99];	DEHA2C03432p;similar to uniprot|P32769 Saccharomyces cerevisiae YKR084c HBS1 GTP binding protein;	Sulfate adenylyltransferase subunit 1	Putative sulfate adenylyltransferase large subunit	Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase	Bifunctional enzyme cysN/cysC	Sulfate adenylyltransferase subunit 1	Sulfate adenylyltransferase subunit 1	Sulfate adenylyltransferase subunit 1	Sulfate adenylyltransferase subunit 1	putative sulfate adenylate transferase, subunit 1	Sulfate adenylyltransferase subunit 1	similar to GB:M27717, GB:M73716, GB:M73717, GB:M73718, GB:M73719, GB:M73720, GB:S40234, SP:P15088, PID:179934, and PID:187442; identified by sequence similarity; putative sulfate adenylate transferase, subunit 1/adenylylsulfate kinase	Sulfate adenylyltransferase subunit 1	Sulfate adenylyltransferase subunit 1	Sulfate adenylyltransferase subunit 1	PMID: 9611812 best DB hits: BLAST: swissprot:O50274; CYSN_PSEAE CYSNCYSC BIFUNCTIONAL ENZYME; E=0.0 swissprot:P72339; NODQ_RHIS3 NODQ BIFUNCTIONAL ENZYME (NODULATION; E=1e-157 swissprot:P13442; NODQ_RHIME NODQ BIFUNCTIONAL ENZYME (NODULATION; E=1e-157 COG: PA4442_1; COG2895 GTPases - Sulfate adenylate transferase subunit 1; E=1e-152 Ta0444; COG0050 GTPases - translation elongation factors; E=4e-47 PA4442_2; COG0529 Adenylylsulfate kinase and related kinases; E=2e-37 PFAM: PF01502; Phosphoribosyl-AMP cyclohydro; E=0.31 PF00009; Elongation factor Tu family; E=1e-87 PF00448; SRP54-type protein, GTPase do; E=0.0058 cysN/cysC bifunctionyal enzyme	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE SULFATE ADENYLATE TRANSFERASE CYSTEINE BIOSYNTHESIS PROTEIN	Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase	Putative sulfate adenylyltransferase subunit 1	SULFATE ADENYLYLTRANSFERASE , ADENYLYLSULFATE KINASE	Sulfate adenylyltransferase subunit 1	Sulfate adenylyltransferase subunit 1	nodulation protein nodQ, sulfate adenylate transferase, subunit 1	Sulfate adenylyltransferase subunit 1	
ECOLI02659	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	putative sulfate adenylate transferase,subunit 2	Sulfate adenylyltransferase subunit 2	similar to GB:Z14978, GB:X82206, SP:P42024, SP:P42025, PID:28346, PID:563883, PID:563886, and PID:563888; identified by sequence similarity; putative sulfate adenylate transferase, subunit 2	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	PMID: 9611812 best DB hits: BLAST: swissprot:O50273; CYSD_PSEAE SULFATE ADENYLYLTRANSFERASE SUBUNIT 2; E=1e-111 gb:AAG42465.1; AF308468_6 (AF308468) ATP sulfurylase D subunit; E=1e-108 pir:H82062; sulfate adenylate transferase, chain 2 VC2560 [imported]; E=1e-108 COG: PA4443; COG0175 3'-phosphoadenosine 5'-phosphosulfate; E=1e-112 cysD; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; E=1e-107 XF1500; COG0175 3'-phosphoadenosine 5'-phosphosulfate; E=5e-98 PFAM: PF01507; Phosphoadenosine phosphosulfate r; E=2e-77 sulfate adenyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	SULFATE ADENYLYLTRANSFERASE SUBUNIT 2	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	nodulation protein nodP, sulfate adenylate transferase, subunit 2	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	Residues 1 to 302 of 302 are 99 pct identical to residues 1 to 302 of a 302 aa protein from Escherichia coli K12 ref: NP_417232.1 ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	Sulfate adenylyltransferase subunit 2	IPR001993: Mitochondrial substrate carrier; IPR002500: Phosphoadenosine phosphosulfate reductase ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase)	similar to Salmonella typhi CT18 ATP sulfurylase (ATP:sulfate adenyltransferase) ATP sulfurylase (ATP:sulfate adenyltransferase)	similar to BR0193, sulfate adenylate transferase, subunit 2 CysD, sulfate adenylate transferase, subunit 2	Sulfate adenylyltransferase subunit 2	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme sulfate adenylyltransferase subunit 2 (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase small subunit)	Sulfate adenylyltransferase subunit 2	
ECOLI02660	Alkaline phosphatase isozyme conversion protein	Alkaline phosphatase isozyme conversion protein	Alkaline phosphatase isozyme conversion, aminopeptidase	Residues 1 to 345 of 345 are 99 pct identical to residues 1 to 345 of a 345 aa protein from Escherichia coli K12 ref: NP_417233.1 alkaline phosphatase isozyme conversion, aminopeptidase	IPR007484: Peptidase M28 aminopeptidase in alkaline phosphatase isozyme conversion	Aminopeptidase in alkaline phosphatase isozyme conversion	Code: R; COG: COG2234 alkaline phosphatase isozyme conversion, aminopeptidase	aminopeptidase; Code: R; COG: COG2234 alkaline phosphatase isozyme conversion	predicted aminopeptidase COG2234	alkaline phosphatase isozyme conversion; Code: R; COG: COG2234 aminopeptidase	Alkaline phosphatase isozyme conversion protein	Peptidase M28 precursor	Alkaline phosphatase isozyme conversion protein	aminopeptidase Y identified by match to protein family HMM PF01546; match to protein family HMM PF04389	Peptidase precursor	Peptidase, M28 family	Alkaline phosphatase isozyme conversion protein precursor Code: R; COG: COG2234	alkaline phosphatase isozyme conversion protein Iap precursor	Peptidase M28 precursor	Alkaline phosphatase isozyme conversion protein; aminopeptidase	Putative uncharacterized protein	Alkaline phosphatase isozyme conversion peptidase	Peptidase M28 precursor	Aminopeptidase in alkaline phosphatase isozyme conversion	Alkaline phosphatase isozyme conversion peptidase	Peptidase M28 precursor	Alkaline phosphatase isozyme conversion peptidase	Putative uncharacterized protein	Putative uncharacterized protein	

ECOLI02661	Uncharacterized protein ygbF	Putative uncharacterized protein STY3064	hypothetical protein	Putative uncharacterized protein ygbF	Putative uncharacterized protein TTHB194	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative inner membrane protein	putative inner membrane protein	CRISPR-associated protein Cas2	conserved hypothetical protein	CRISPR-associated protein Cas2 identified by match to protein family HMM TIGR01873	CRISPR-associated protein, Cas2	CRISPR-associated protein, Cas2	orf conserved hypothetical protein	CRISPR-associated protein, Cas2	CRISPR-associated protein, Cas2	Hypothetical protein	CRISPR-associated protein, Cas2	CRISPR-associated protein, Cas2	CRISPR-associated protein, Cas2	predicted CRISPR-associated protein similar to protein TTHB194 of thermus thermophilus	CRISPR-associated protein Cas2 TIGRFAM: CRISPR-associated protein Cas2 KEGG: gsu:GSU1393 CRISPR-associated CT1978 family protein	CRISPR-associated protein Cas2 TIGRFAM: CRISPR-associated protein Cas2 KEGG: ppr:PBPRC0033 hypothetical protein	CRISPR-associated protein Cas2 TIGRFAM: CRISPR-associated protein Cas2 KEGG: gsu:GSU1393 CRISPR-associated CT1978 family protein	hypothetical protein Evidence 5 : No homology to any previously reported sequences	CRISPR-associated protein, Cas2 family	CRISPR-associated protein Cas2	CRISPR-associated protein Cas2	
ECOLI02662	Uncharacterized protein ygbT	CRISPR-associated protein Cas1B	Putative CRISPR-associated protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein TTHB193	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	hypothetical protein	Protein of unknown function DUF48	CRISPR-associated protein Cas1	Protein of unknown function DUF48	CRISPR-associated protein Cas1	Code: L; COG: COG1518 conserved hypothetical protein	CRISPR-associated protein Cas1 identified by match to protein family HMM TIGR00287	CRISPR-associated protein Cas1	CRISPR-associated protein Cas1	Code: L; COG: COG1518; orf conserved hypothetical protein	CRISPR-associated protein Cas1	Protein of unknown function DUF48	Conserved hypothetical protein	Hypothetical protein	CRISPR-associated protein Cas1	Conserved hypothetical protein cytoplasmic protein	Conserved hypothetical protein cytoplasmic protein	
ECOLI02663	Uncharacterized protein ygcH	Putative CRISPR-associated protein	hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YgcH of Escherichia coli	Putative uncharacterized protein TTHB192	putative cytoplasmic protein	Putative cytoplasmic protein	putative CRISPR-associated protein	CRISPR-associated protein, Cse3 family identified by match to protein family HMM TIGR01907	orf conserved hypothetical protein	CRISPR-associated protein, CT1974	CRISPR-associated protein, CT1974	CRISPR-associated protein, CT1974	transcriptional regulator, Fis family protein TIGRFAM: CRISPR-associated protein, Cse3 family KEGG: ppr:PBPRC0039 hypothetical protein	CRISPR-associated protein, Cse3 family TIGRFAM: CRISPR-associated protein, Cse3 family KEGG: deh:cbdb_A1519 putative CRISPR-associated protein	CRISPR-associated protein, Cse3 family	CRISPR-associated protein, Cse3 family	CRISPR-associated protein, Cse3 family	Predicted protein	CRISPR-associated protein, Cse3 family	CRISPR-associated protein, Cse3 family	Putative uncharacterized protein	Crispr-associated protein, Cse3 family	Crispr-associated protein, Cse3 family	Putative uncharacterized protein ygcH	Crispr-associated protein, Cse3 family	CRISPR-associated protein, Cse3 family	Crispr-associated protein, Cse3 family	
ECOLI02664	Uncharacterized protein ygcI	CRISPR-associated protein, CT1976 family	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Complete genome; segment 3/17	Putative uncharacterized protein TTHB191	putative cytoplasmic protein	similar to Salmonella typhi CT18 hypothetical protein hypothetical protein	CRISPR-associated protein, CT1976 family	Putative cytoplasmic protein	hypothetical protein	CRISPR-associated protein, CT1976	putative cytoplasmic protein	conserved hypothetical protein,CRISP-associated	Putative uncharacterized protein	putative cytoplasmic protein	CRISPR-associated protein, CT1976	Hypothetical protein	Hypothetical protein	CRISPR-associated protein, CT1976	Conserved hypothetical protein cytoplasmic protein	Conserved hypothetical protein cytoplasmic protein	CRISPR-associated protein, CT1976	CRISPR-associated protein, CT1976	conserved hypothetical protein similar to protein TTHB191 of thermus thermophilus	CRISPR-associated protein Cas5 family TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5 KEGG: sth:STH668 hypothetical protein	CRISPR-associated protein Cas5 family protein TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5 KEGG: ppr:PBPRC0036 hypothetical protein	
ECOLI02665	Uncharacterized protein ygcJ	CRISPR-associated protein, CT1975 family	Putative CRISPR-associated protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Similar to unknown protein YgcJ of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 hypothetical protein hypothetical protein	CRISPR-associated protein, CT1975 family	Putative cytoplasmic protein	CRISPR-associated protein, CT1975	putative cytoplasmic protein	putative cytoplasmic protein	CRISPR-associated protein, Cse4 family identified by match to protein family HMM TIGR01869	CRISPR-associated protein, CT1975	Conserved hypothetical protein	CRISPR-associated protein, CT1975	CRISPR-associated protein, CT1975	CRISPR-associated protein, CT1975	Hypothetical protein	CRISPR-associated protein, Cse4 family protein TIGRFAM: CRISPR-associated protein, Cse4 family KEGG: ppr:PBPRC0037 hypothetical protein	CRISPR-associated protein	CRISPR-associated protein	CRISPR-associated protein, Cse4 family	CRISPR-associated protein, Cse4 family	CRISPR-associated protein, Cse4 family	CRISPR-associated protein, Cse4 family	
ECOLI02666	Uncharacterized protein ygcK	Predicted protein	CRISPR-associated protein, Cse2 family	CRISPR-associated protein, Cse2 family	Predicted protein	
ECOLI02667	Uncharacterized protein ygcL	hypothetical protein	conserved hypothetical protein	CRISPR-associated protein, Cse1 family protein TIGRFAM: CRISPR-associated protein, Cse1 family KEGG: ppr:PBPRC0035 hypothetical protein	CRISPR-associated protein, Cse1 family	Predicted protein	CRISPR-associated protein, Cse1 family	CRISPR-associated protein, Cse1 family	CRISPR-associated protein, Cse1 family	Putative uncharacterized protein	Putative uncharacterized protein	CRISPR-associated protein, Cse1 family	Putative uncharacterized protein	Predicted protein	
ECOLI02668	Uncharacterized protein ygcB	Putative CRISPR-associated helicase	Putative uncharacterized protein	hypothetical protein	Putative helicase	Putative uncharacterized protein ygcB	Similar to unknown protein YgcB of Escherichia coli	Putative uncharacterized protein TTHB187	Putative helicase	hypothetical protein	cRISPR-associated helicase Cas3, core	Code: R; COG: COG1203 putative helicase	Putative helicase	CRISPR-associated helicase Cas3, core	CRISPR-associated helicase Cas3, protein	CRISPR-associated helicase Cas3, core	CRISPR-associated helicase Cas3, core	Helicase cytoplasmic protein	Helicase cytoplasmic protein	CRISPR-associated helicase Cas3	CRISPR-associated helicase Cas3, core	CRISPR-associated helicase Cas3 KEGG: ppr:PBPRC0040 hypothetical protein TIGRFAM: CRISPR-associated helicase Cas3 PFAM: helicase domain protein SMART: DEAD-like helicases-like	CRISPR-associated helicase	hypothetical protein; putative DEAD/DEAH box helicase domain Evidence 5 : No homology to any previously reported sequences	CRISPR-associated helicase Cas3	CRISPR-associated helicase Cas3	CRISPR-associated helicase Cas3	CRISPR-associated helicase Cas3	Putative helicase protein	

ECOLI02669	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phospho-adenylylsulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	putative phosphoadenosine phosphosulfatereductase	Phosphoadenosine phosphosulfate reductase	identified by match to protein family HMM PF01507; match to protein family HMM TIGR00434 phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	phosphoadenylyl-sulfate reductase (thioredoxin-dependent)	Putative phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	similar to AL589708-24|CAC33945.1| percent identity: 46 in 233 aa putative adenosine 5'-phosphosulphate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	Phosphoadenosine phosphosulfate reductase	
ECOLI02670	Sulfite reductase [NADPH] hemoprotein beta- component	Sulfite reductase hemoprotein beta component	NADPH-sulfite reductase iron-sulfur protein	Sulfite reductase	NADPH-sulfite reductase iron-sulfur protein	Ferredoxin-sulfite reductase	hypothetical sulfite reductase	Ferredoxin-sulfite reductase	Sulfite reductase [NADPH] hemoprotein beta- component	Sulfite reductase [NADPH] hemoprotein beta- component	Sulfite reductase	Sulfite reductase [NADPH] hemoprotein beta- component	Ferredoxin-sulfite reductase	Putative nitrite/sulfite reductase	putative sulfite reductase (NADPH) hemoprotein beta-component	Sulfite reductase [NADPH] hemoprotein beta- component	Sulfite reductase [NADPH] hemoprotein beta- component	Sulfite reductase [NADPH] hemoprotein beta- component	Sulfite reductase [NADPH] hemoprotein beta- component	PMID: 8347657 best DB hits: BLAST: swissprot:P30008; SIR_SYNP7 SULFITE REDUCTASE (FERREDOXIN) -----; E=1e-125 ddbj:BAA90857.1; (AB031214) YvgQ [Bacillus halodurans]; E=1e-122 ddbj:BAB04329.1; (AP001509) sulfite reductase (NADPH) [Bacillus; E=1e-122 COG: BH0610; COG0155 Sulfite reductase hemoprotein beta-component; E=1e-123 MTH280_2; COG2221 Oxidoreductase related to nitrite reductase; E=1e-06 PA4130; COG0155 Sulfite reductase hemoprotein beta-component; E=3e-06 PFAM: PF01077; Nitrite and sulphite reductas; E=1.4e-25 sulfite reductase	Putative sulfite reductase [NADPH] hemoprotein beta-component	ferredoxin-sulfite reductase	sulfite reductase hemoprotein beta-component	Nitrite/sulfite reductase family protein	Sulfite reductase [NADPH] hemoprotein beta- component	Sulfite reductase [NADPH] hemoprotein beta- component	CDS_ID OB1654; NADPH sulfite (NADPH) reductase iron-sulfur protein	Sulfite reductase [NADPH] hemoprotein beta- component	Sulfite reductase [NADPH] hemoprotein beta- component	
ECOLI02671	Sulfite reductase [NADPH] flavoprotein alpha- component	NADPH-sulfite reductase flavoprotein subunit	NADPH-sulfite reductase flavoprotein subunit	Sulfite reductase [NADPH] flavoprotein alpha- component	Sulfite reductase [NADPH] flavoprotein alpha- component	Sulfite reductase [NADPH] flavoprotein alpha- component	putative sulfite reductase (NADPH) flavoprotein alpha-component	Sulfite reductase [NADPH] flavoprotein alpha- component	Sulfite reductase [NADPH] flavoprotein alpha- component	Sulfite reductase [NADPH] flavoprotein alpha- component	Sulfite reductase [NADPH] flavoprotein alpha- component	PMID: 2550423 best DB hits: BLAST: pir:G70040; sulfite reductase (NADPH) (EC 1.8.1.2) flavoprotein yvgR; E=8e-80 ddbj:BAB04328.1; (AP001509) sulfite reductase (NADPH) [Bacillus; E=2e-79 gb:AAG57872.1; AE005504_4 (AE005504) sulfite reductase (NADPH),; E=4e-75 COG: BS_yvgR; COG0369 Sulfite reductase flavoprotein subunit; E=8e-81 PA3490; COG2878 Predicted alternative beta subunit of; E=2e-04 PFAM: PF00667; FAD binding domain; E=1.9e-14 PF00175; Oxidoreductase FAD/NAD-binding d; E=2.8e-35 sulfite reductase [NADPH] flavoprotein alpha-component	Sulfite reductase [NADPH] flavoprotein alpha- component	sulfite reductase flavoprotein subunit	Sulfite reductase [NADPH] flavoprotein alpha- component	Sulfite reductase [NADPH] flavoprotein alpha- component	CDS_ID OB1653; NADPH sulfite (NADPH) reductase flavoprotein	Sulfite reductase	Sulfite reductase [NADPH] flavoprotein alpha- component	Sulfite reductase [NADPH] flavoprotein alpha- component	Residues 1 to 599 of 599 are 98 pct identical to residues 1 to 599 of a 599 aa protein CYSJ_ECOLI sp: P38038 sulfite reductase [NADPH] flavoprotein alpha-component (SIR-FP)	Sulfite reductase [NADPH] flavoprotein alpha- component	Sulfite reductase flavoprotein subunit	Sulfite reductase flavoprotein	Sulfite reductase [NADPH] flavoprotein alpha- component	identified by similarity to SP:P38038; match to protein family HMM PF00175; match to protein family HMM PF00258; match to protein family HMM PF00667; match to protein family HMM TIGR01931 sulfite reductase (NADPH) flavoprotein alpha-component	NADPH-sulfite reductase, flavoprotein subunit	Sulfite reductase (NADPH) flavoprotein	sulfite reductase (NADPH) flavoprotein alpha-component CysI	
ECOLI02672	Putative 6-pyruvoyl tetrahydrobiopterin synthase	6-pyruvoyltetrahydropterin synthase	6-pyruvoyl tetrahydrobiopterin synthase	6-pyruvoyltetrahydropterin synthase	Putative 6-pyruvoyl tetrahydrobiopterin synthase	6-pyruvoyl tetrahydrobiopterin synthase	Putative uncharacterized protein PH0634	PtpS-like 6-pyruvoyl-tetrahydropterin synthase	6-pyruvoyl tetrahydrobiopterin synthase, putative	Probable 6-pyruvoyl tetrahydrobiopterin synthase	6-pyruvoyl tetrahydrobiopterin synthase, putative	6-pyruvoyl-tetrahydropterin synthase	Putative 6-pyruvoyl tetrahydrobiopterin synthase	Putative 6-pyruvoyl tetrahydrobiopterin synthase	6-pyruvoyl-tetrahydropterin synthase	6-pyruvoyltetrahydropterin synthase	Putative 6-pyruvoyl tetrahydrobiopterin synthase	6-pyruvoyl tetrahydrobiopterin synthase, putative	6-pyruvoyl tetrahydrobiopterin synthase, putative	Putative 6-pyruvoyl tetrahydrobiopterin synthase	6-carboxy-5,6,7,8-tetrahydropterin synthase	6-pyruvoyl tetrahydrobiopterin synthase, putative	6-pyruvoyl tetrahydrobiopterin synthase	VACUOLAR ATP SYNTHASE 16 KD PROTEOLIPID SUBUNIT	Putative 6-pyruvoyl tetrahydrobiopterin synthase	6-carboxy-5,6,7,8-tetrahydropterin synthase	CDS_ID OB2804 6-pyruvoyl tetrahydrobiopterin synthase	unknown protein	Putative 6-pyruvol tetrahydrobiopterin synthase	
ECOLI02673	Probable electron transfer flavoprotein-quinone oxidoreductase ygcN	Probable electron transfer flavoprotein-quinone oxidoreductase ygcN	Putative uncharacterized protein ygcN	Residues 1 to 433 of 433 are 97 pct identical to residues 1 to 433 of a 433 aa protein from Escherichia coli K12 ref: NP_417246.1 orf, conserved hypothetical protein	Monooxygenase, FAD-binding, putative	Mb0576c, -, len: 408 aa. Equivalent to Rv0561c, len: 408 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 408 aa overlap). Possible oxidoreductase (EC 1.-.-.-), highly similar (except in first 30 aa) to NP_302482.1|NC_002677 putative FAD-linked oxidoreductase from Mycobacterium leprae (408 aa). Also similar to T34627 probable electron transfer oxidoreductase from Streptomyces coelicolor (430 aa); and some bacteriochlorophyll synthases e.g.  NP_069300.1|NC_000917 bacteriochlorophyll synthase from Archaeoglobus fulgidus (410 aa); Q55087 GERANYLGERANYL HYDROGENASE (407 aa), FASTA scores: opt: 208, E(): 1.7e-06, (26.9% identity in 327 aa overlap). POSSIBLE OXIDOREDUCTASE	Code: C; COG: COG0644 conserved hypothetical protein	Code: C; COG: COG0644 conserved hypothetical protein	Code: C; COG: COG0644; orf conserved hypothetical protein	Probable electron transfer flavoprotein-quinone oxidoreductase YgcN	Probable electron transfer flavoprotein-quinone oxidoreductase ygcN	FAD dependent oxidoreductase	hypothetical protein similar to oxidoreductase Mapped to H37Rv Rv0561c	Possible oxidoreductase	conserved hypothetical protein Code: C; COG: COG0644	putative electron transfer flavoprotein-quinone oxidoreductase YgcN	Putative oxidoreductase	transcript_id=ENSOPRT00000015542	Pyridine nucleotide-disulphide oxidoreductase family protein	Predicted oxidoreductase with FAD/NAD(P)-binding domain	Pyridine nucleotide-disulphide oxidoreductase family protein	Electron-transferring-flavoprotein dehydrogenase	Pyridine nucleotide-disulphide oxidoreductase family protein	Putative uncharacterized protein	FAD dependent oxidoreductase	FAD dependent oxidoreductase	Pyridine nucleotide-disulphide oxidoreductase family protein	Pyridine nucleotide-disulphide oxidoreductase family protein	Putative uncharacterized protein	
ECOLI02674	Ferredoxin-like protein ygcO	Putative uncharacterized protein	Residues 1 to 86 of 86 are 95 pct identical to residues 13 to 98 of a 98 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289317.1 orf, conserved hypothetical protein	Code: C; COG: COG2440 conserved hypothetical protein	Code: C; COG: COG2440 conserved hypothetical protein	Code: C; COG: COG2440; orf conserved hypothetical protein	Ferredoxin-like protein YgcO	Ferredoxin-like protein YgcO	conserved hypothetical protein Code: C; COG: COG2440	ferredoxin-like protein YgcO	Putative ferredoxin	4Fe-4S ferredoxin iron-sulfur binding domain protein	Predicted 4Fe-4S cluster-containing protein	Putative ferredoxin	Putative uncharacterized protein	Putative ferredoxin	Putative uncharacterized protein	Putative ferredoxin	Putative ferredoxin	Putative uncharacterized protein	Putative 4Fe-4S cluster-containing protein	Putative 4Fe-4S cluster-containing protein	Putative 4Fe-4S cluster-containing protein	Putative 4Fe-4S cluster-containing protein	Putative 4Fe-4S cluster-containing protein	Predicted 4Fe-4S cluster-containing protein	Putative 4Fe-4S cluster-containing protein	YgcO protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein	
ECOLI02675	Uncharacterized protein ygcP	Probable glycerol uptake operon antiterminator	Glycerol uptake operon antiterminator	Lmo1405 protein	Transcriptional antiterminator of glycerol uptake operon	Glycerol uptake operon antiterminator regulatory protein	transcriptional antiterminator of glycerol uptake operon	Putative anti-terminator regulatory protein	Glycerol-3-phosphate responsive antiterminator (MRNA-binding), GLPP	Glycerol-3-phosphate responsive antiterminator	Lin1442 protein	similar to Escherichia coli K12 putative anti-terminator regulatory protein gi: 1789127 (192 aa).  BLAST with identity of 96% in 192 aa. This CDS ontains frameshift. The sequence has been checked and is believed to be correct. pseudo	Glycerol uptake operon antiterminator regulatory protein	identified by similarity to EGAD:18158; match to protein family HMM PF04309 glycerol uptake operon antiterminator regulatory protein	Glycerol uptake operon antiterminator regulatory protein	InterProMatches:IPR011060; control of mRNA stability of glpD transcription antiterminator	glycerol uptake operon antiterminator regulatory protein	Ortholog of S. aureus MRSA252 (BX571856) SAR1273 putative glycerol uptake operon antiterminator regulatory protein	glycerol uptake operon antiterminator regulatory protein	identified by similarity to SP:P30300; match to protein family HMM PF04309 glycerol uptake operon antiterminator regulatory protein	glycerol uptake operon antiterminator regulatory protein	Similar to Bacillus subtilis glycerol uptake operon antiterminator regulatory protein GlpP SW:GLPP_BACSU (P30300) (192 aa) fasta scores: E(): 3.1e-26, 42.614% id in 176 aa, and to Bacillus halodurans transcriptional antiterminator of glycerol uptake operon BH1091 TR:Q9KDX0 (EMBL:AP001510) (183 aa) fasta scores: E(): 7e-26, 43.503% id in 177 aa putative glycerol uptake operon antiterminator regulatory protein	Code: K; COG: COG1954 putative anti-terminator regulatory protein	identified by similarity to EGAD:18158; match to protein family HMM PF04309 glycerol uptake operon antiterminator regulatory protein	similar to gi|15924288|ref|NP_371822.1| [Staphylococcus aureus subsp. aureus Mu50], percent identity 72 in 177 aa, BLASTP E(): 1e-69 glycerol-3-phosphate responsive antiterminator	identified by similarity to SP:P30300; match to protein family HMM PF04309 glycerol uptake operon antiterminator regulatory protein	Code: K; COG: COG1954 putative anti-terminator regulatory protein	glycerol uptake operon antiterminator regulatory protein identified by match to protein family HMM PF04309	glycerol uptake operon antiterminator regulatory protein	
ECOLI02676	Putative electron transfer flavoprotein subunit ygcQ	similar to tr|Q9HZP7 Pseudomonas aeruginosa Electron transfer flavoprotein alpha-subunit, hypothetical start	Probable electron transfer flavoprotein subunit alpha, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC27D7.06]	similar to sp|Q12480 Saccharomyces cerevisiae YPR004c singleton, start by similarity	Electron transfer flavoprotein, alpha subunit	Electron transfer flavoprotein alpha subunit	Putative electron transfer flavoprotein subunit ygcQ	ETF1 {Cryptococcus neoformans var. neoformans} - related; go_component: mitochondrion [goid 0005739]; go_function: electron carrier activity [goid 0009055] ETF1-related	Putative uncharacterized protein	Residues 1 to 297 of 297 are 97 pct identical to residues 1 to 297 of a 297 aa protein from Escherichia coli K12 ref: NP_417249.1 putative flavoprotein	CHR28_tmp.1150, predicted protein, len = 326 aa, probably similar to electron-transfer-flavoprotein, alpha polypeptide; predicted pI = 6.7861; good similarity to many electron-transfer-flavoprotein, alpha polypeptides from diverse organisms; contains a electron transfer flavoprotein alpha subunit domain electron-transfer-flavoprotein, alpha polypeptide, putative	identified by match to protein family HMM PF00766 putative electron transfer flavoprotein, alpha subunit	Code: C; COG: COG2025 putative flavoprotein	Code: C; COG: COG2025 putative flavoprotein	Electron transfer flavoprotein, alpha subunit	Putative electron transfer flavoprotein subunit YgcQ	Electron transfer flavoprotein, alpha subunit	Electron transfer flavoprotein, alpha subunit	Putative flavoprotein	Electron transfer flavoprotein subunit alpha, mitochondrial Precursor (Alpha-ETF) [Source:UniProtKB/Swiss-Prot;Acc:P13804]	transcript_id=ENSSART00000004451	electron-transfer-flavoprotein, alpha polypeptide, putative	putative flavoprotein Code: C; COG: COG2025	electron-transfer-flavoprotein, alpha polypeptide, putative	putative electron transfer flavoprotein subunit YgcQ	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit KEGG: slo:Shew_2583 electron transfer flavoprotein, alpha subunit Electron transfer flavoprotein alpha subunit	KEGG: slo:Shew_2583 electron transfer flavoprotein, alpha subunit electron transfer flavoprotein, alpha subunit	Electron transfer flavoprotein alpha subunit	
ECOLI02677	Putative electron transfer flavoprotein subunit ygcR	Putative transport protein	Residues 1 to 261 of 261 are 98 pct identical to residues 1 to 261 of a 261 aa protein from Escherichia coli K12 ref: NP_417250.1 putative transport protein	Code: C; COG: COG2086 putative transport protein	Code: C; COG: COG2086 putative transport protein	Putative electron transfer flavoprotein subunit YgcR	Putative transport protein	putative transport protein Code: C; COG: COG2086	putative electron transfer flavoprotein subunit YgcR	Electron transfer flavoprotein	Predicted flavoprotein	Electron transfer flavoprotein	Electron transfer flavoprotein alpha/beta-subunit	Electron transfer flavoprotein	Putative uncharacterized protein	Electron transfer flavoprotein alpha/beta-subunit	Electron transfer flavoprotein	Electron transfer flavoprotein	Putative electron transfer flavoprotein	Putative flavoprotein	Putative flavoprotein	Putative flavoprotein	Electron transfer flavoprotein alpha/beta-subunit	Putative flavoprotein	Putative flavoprotein	Predicted flavoprotein	Putative flavoprotein	YgcR protein	Predicted flavoprotein	
ECOLI02678	Inner membrane metabolite transport protein ygcS	Hypothetical metabolite transport protein ygcS	Partial putative transport protein	Residues 1 to 469 of 469 are 99 pct identical to residues 1 to 469 of a 469 aa protein from Escherichia coli K12 ref: NP_417251.1 putative transport protein	Putative transporter protein	membrane protein, putative	Putative MFS Superfamily sugar transporter	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Hypothetical metabolite transport protein YgcS	Putative transporter protein	Hypothetical metabolite transport protein YgcS	major facilitator superfamily MFS_1 PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: rxy:Rxyl_2255 general substrate transporter	Transporter protein	putative transport protein Code: GEPR; COG: COG0477	Transporter protein	putative metabolite transport protein YgcS	Putative benzoate transport protein	Major facilitator family transporter	Major facilitator superfamily MFS_1	Predicted transporter	Transporter, major facilitator family	Major facilitator family transporter	Major facilitator superfamily MFS_1	Major facilitator family transporter	Putative uncharacterized protein	General substrate transporter	General substrate transporter	Major facilitator family transporter	
ECOLI02679	Uncharacterized FAD-linked oxidoreductase ygcU	Alkyldihydroxyacetonephosphate synthase	Putative uncharacterized protein	Alkyldihydroxyacetonephosphate synthase	Putative conserved protein	Putative uncharacterized protein	Uncharacterized FAD-linked oxidoreductase ygcU	Alkyldihydroxyacetonephosphate synthase, putative	FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal	SCF91.28c, possible flavoprotein, len: 530 aa.  Highly similar to two hypothetical proteins from Mycobacterium tuberculosis e.g. TR:O53525 (EMBL:AL021925) hypothetical 49.8 KD protein (457 aa), fasta scores opt: 1698 z-score: 1838.9 E():0 57.7% identity in 461 aa overlap. Also similar to several eukaryotic alkyldihydroxyacetonephosphate synthases (EC 2.5.1.26) e.g. from Homo sapiens (Human) SW:ADAS_HUMAN (EMBL:Y09443) (658 aa), fasta scores opt: 598 z-score: 648.1 E(): 1e-28 30.4% identity in 573 aa overlap. Contains a Pfam match to entry PF01565 FAD_binding_4, FAD binding domain. putative flavoprotein	Alkylglycerone-phosphate synthase	Putative uncharacterized protein	alkyldihydroxyacetonephosphate synthase	, predicted protein, len = 622 aa, alkyl dihydroxyacetonephosphate synthase; predicted pI = 8.0829; characterised in Leishmania major; contains a FAD linked oxidases, C-terminal domain and a FAD binding domain alkyl dihydroxyacetonephosphate synthase	identified by match to protein family HMM PF01565; match to protein family HMM PF02913 alkyl-dihydroxyacetonephosphate synthase, putative	FAD linked oxidase-like	FAD linked oxidase-like	FAD/FMN-containing dehydrogenase COG0277	Code: C; COG: COG0277; orf conserved hypothetical protein	Hypothetical flavoprotein YgcU	FAD linked oxidase-like	Alkylglycerone-phosphate synthase	Alkylglycerone-phosphate synthase	FAD linked oxidase-like	FAD linked oxidase-like protein	Putative uncharacterized protein	FAD linked oxidase-like	FAD linked oxidase-like	flavoprotein identified by match to protein family HMM PF01565; match to protein family HMM PF02913	
ECOLI02680	Uncharacterized oxidoreductase ygcW	Putative oxidoreductase	Code: IQR; COG: COG1028 putative oxidoreductase	Hypothetical oxidoreductase YgcW	Hypothetical oxidoreductase YgcW	putative oxidoreductase YgcW	Oxidoreductase, short chain dehydrogenase/reductase family	Short-chain dehydrogenase/reductase SDR	Predicted deoxygluconate dehydrogenase	Oxidoreductase, short chain dehydrogenase/reductase family	Short-chain dehydrogenase/reductase SDR	Oxidoreductase, short chain dehydrogenase/reductase family	Putative uncharacterized protein	Oxidoreductase, short chain dehydrogenase/reductase family	Putative oxidoreductase	Putative deoxygluconate dehydrogenase	Putative deoxygluconate dehydrogenase	Putative deoxygluconate dehydrogenase	Putative deoxygluconate dehydrogenase	Putative deoxygluconate dehydrogenase	Predicted deoxygluconate dehydrogenase	Putative deoxygluconate dehydrogenase	YgcW protein	Predicted deoxygluconate dehydrogenase	Predicted deoxygluconate dehydrogenase	predicted deoxygluconate dehydrogenase	Predicted deoxygluconate dehydrogenase	
ECOLI02681	Inner membrane protein yqcE	Putative membrane protein	Hypothetical protein yqcE	Putative transport protein	putative permease, putative mpn421	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	identified by sequence similarity; putative; ORF located using Blastx; COG0477 putative permease	identified by sequence similarity; putative; ORF located using Blastx permease	Code: GEPR; COG: COG0477 putative transport protein	Major facilitator superfamily (MFS_1) transporter	Putative uncharacterized protein	major facilitator family protein identified by similarity to SP:P46907; match to protein family HMM PF07690	Putative uncharacterized protein yqcE	putative transporter	Major facilitator family protein	Major facilitator family transporter	Major facilitator superfamily MFS_1 precursor	Predicted transporter	Major facilitator family transporter	Major facilitator superfamily MFS_1	Major facilitator family transporter	Inner membrane protein	Putative uncharacterized protein	Major facilitator superfamily MFS_1	Putative membrane protein	Major facilitator family transporter	Putative transport protein	Putative transporter	pseudo	
ECOLI02682	Uncharacterized sugar kinase ygcE	Gluconate kinase	Hypothetical sugar kinase ygcE	Putative kinase	Carbohydrate kinase, FGGY family	identified by match to protein family HMM PF00370; match to protein family HMM PF02782 carbohydrate kinase, FGGY family	carbohydrate kinase, FGGY	Sugar (pentulose and hexulose) kinase COG1070	Code: G; COG: COG1070 putative kinase	Hypothetical sugar kinase YgcE	Sugar kinase, putative	Hypothetical sugar kinase YgcE	carbohydrate kinase, FGGY	carbohydrate kinase, FGGY PFAM: carbohydrate kinase, FGGY KEGG: hch:HCH_04623 sugar (pentulose and hexulose) kinase	xylulose kinase, putative	putative glycerol kinase	putative sugar kinase YgcE	Carbohydrate kinase, FGGY	KEGG: hch:HCH_04623 sugar (pentulose and hexulose) kinase sugar (pentulose and hexulose) kinase	Carbohydrate kinase FGGY	Family membership	Carbohydrate kinase, FGGY family protein	Carbohydrate kinase FGGY	Probable carbohydrate kinase	Carbohydrate kinase, FGGY	Carbohydrate kinase FGGY	Carbohydrate kinase FGGY	Predicted kinase	Carbohydrate kinase, FGGY family protein	

ECOLI02683	Uncharacterized protein ygcF	Putative uncharacterized protein	Possible organic radical activating enzyme	Possible organic radical activating enzyme	Putative uncharacterized protein	Putative uncharacterized protein	Organic radical activating enzyme	Putative uncharacterized protein	putative organic radical activating enzymes	Hypothetical protein ygcF	Putative uncharacterized protein	Putative uncharacterized protein	Radical activating enzyme	Putative uncharacterized protein	Uncharacterized protein BUsg_401	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein VP1639	7-carboxy-7-deazaguanine synthase homolog	unknown protein	Organic radical activating enzymes	Putative uncharacterized protein RP607	Residues 1 to 223 of 223 are 100 pct identical to residues 1 to 223 of a 223 aa protein from Escherichia coli O157:H7 ref: NP_311660.1 orf, conserved hypothetical protein	Organic radical activating enzymes	Similar to unknown protein YgcF of Escherichia coli	Radical activating enzyme	putative Organic radical activating enzymes	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative coenzyme PQQ synthesis protein, nitrogenase iron-molybdenum domain	
ECOLI02684	UPF0603 protein ygcG	Glycine rich protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative glycine rich membrane protein	Hypothetical membrane spanning protein	Hypothetical protein ygcG	similar to GP:14024255; identified by sequence similarity; putative conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Conserved protein	Putative membrane protein	Lipoprotein, putative	Putative uncharacterized protein	hypothetical protein	DUF477	hypothetical protein	Residues 6 to 269 of 269 are 92 pct identical to residues 37 to 313 of a 313 aa protein from Escherichia coli K12 ref: NP_417258.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Glycine rich protein	Putative uncharacterized protein	COG1512 conserved hypothetical protein	hypothetical protein	glycine rich protein	conserved hypothetical protein	Protein of unknown function DUF477	Code: R; COG: COG1512 conserved hypothetical protein	
ECOLI02685	Enolase	Enolase	Enolase	Enolase	Enolase	Enolase	Enolase	Enolase	Enolase	Enolase	Enolase	ENOLASE;10_1690, ENOLASE, ENO_FASHE, gene found by Glimmer;	Enolase	Enolase	Enolase	Enolase	identified by match to PFAM protein family HMM PF04221 enolase	Enolase	Enolase 2	Enolase	Enolase	Enolase	Enolase	Enolase	Enolase	hypothetical enolase	Enolase	Enolase	Enolase	
ECOLI02686	CTP synthase	CTP synthase;	highly similar to sp|P28274 Saccharomyces cerevisiae CTP synthase 1 (EC 6.3.4.2) (UTP--ammonia ligase 1), hypothetical start	CTP synthase	CTP synthase [Source:GeneDB_Spombe;Acc:SPAC10F6.03c]	highly similar to sp|P28274 Saccharomyces cerevisiae YBL039c URA7 CTP synthase 1, start by similarity	CTP synthase	CTP synthase	CTP synthase	CTP synthase	CTP synthase	CTP synthase	CTP synthase	CTP synthase	CTP synthase	CTP SYNTHASE;11_0880, CTP SYNTHASE, PYRG_yeast, gene found by Glimmer;	CTP synthase	CTP synthase	highly similar to uniprot|P28274 Saccharomyces cerevisiae YBL039c URA7 CTP synthase 1 or uniprot|P38627 Saccharomyces cerevisiae YJR103w URA8;	CTP synthase	DEHA2G24574p;highly similar to uniprot|P28274 Saccharomyces cerevisiae YBL039c URA7 CTP synthase 1 or uniprot|P38627 Saccharomyces cerevisiae YJR103w URA8;	CTP synthase	CTP synthase	CTP synthase	CTP synthase	similar to GB:U07349,  and PID:531820; identified by sequence similarity; putative CTP synthase	CTP synthase	CTP synthase	CTP synthase	
ECOLI02687	Protein mazG	MazG protein	Putative uncharacterized protein	Regulatory protein for beta-lactamase	Putative uncharacterized protein	Protein mazG homolog	Tetrapyrrole methylase family protein/MazG family	MazG protein	Putative uncharacterized protein	MazG family protein	MazG family protein	Mazg protein	MazG	Putative uncharacterized protein	MazG protein	Predicted pyrophosphatase	Putative pyrophosphatase	Putative uncharacterized protein mazG	Putative uncharacterized protein	Alr0512 protein	Putative uncharacterized protein	putative MazG protein	Tetrapyrrole methylase family protein/MazG family protein	MazG protein	similar to GP:2708269; identified by sequence similarity; putative mazG family protein	MazG family protein	MazG protein	MazG family protein	MazG protein	
ECOLI02688	PemK-like protein 1	Probable ppGpp-regulated growth inhibitor ChpA/MazF	Cell growth regulatory protein	putative MazF protein	Putative growth inhibitory protein	cell growth regulatory protein	ppGpp-regulated growth inhibitor (ChpA/MazF)	Putative ppGpp-regulated growth inhibitor	PemK-like protein 1	PpGpp-regulated growth inhibitor	PemK-like protein	Cell growth regulatory protein	PemK-like protein	Code: T; COG: COG2337 probable growth inhibitor, PemK-like, autoregulated	PemK-like protein	probable growth inhibitor, PemK-like, autoregulated; Code: T; COG: COG2337 ChpA	transcriptional modulator of MazE/toxin, MazF	transcriptional modulator of MazE/toxin, MazF	autoregulated; Code: T; COG: COG2337 probable PemK-like growth inhibitor	transcriptional modulator of MazE/toxin, MazF PFAM: PemK-like protein: (9.3e-26) KEGG: dra:DR0417 ppGpp-regulated growth inhibitor ChpA/MazF, putative, ev=2e-24, 50% identity	transcriptional modulator of MazE/toxin, MazF	PemK-like protein	Probable growth inhibitor, PemK-like, autoregulated	transcriptional modulator of MazE/toxin, MazF PFAM: PemK family protein KEGG: ppr:PBPRA2672 putative MazF protein	transcriptional modulator of MazE/toxin, MazF PFAM: PemK family protein KEGG: gka:GK1648 ppGpp-regulated growth inhibitor (ChpA/MazF)	transcriptional modulator of MazE/toxin, MazF	putative PemK-like protein similar to Deinococcus radiodurans gi:15805444	probable growth inhibitor, PemK-like, autoregulated	Transcriptional modulator of MazE/toxin, MazF	
ECOLI02689	PemI-like protein 1	Cell growth regulatory protein	Suppressor of growth inhibitory protein ChpA	cell growth regulatory protein	suppressor of ppGpp-regulated growth inhibitor (ChpA/MazF)	PemI-like protein 1	Suppressor of ppGpp-regulated growth inhibitor	PemI-like protein	Code: T; COG: COG2336 suppressor of inhibitory function of ChpA, PemI-like, autoregulated	suppressor of inhibitory function of ChpA, PemI-like, autoregulated; Code: T; COG: COG2336 ChpR	Transcriptional regulator/antitoxin, MazE	transcriptional regulator/antitoxin, MazE	autoregulated; Code: T; COG: COG2336 PemI-like suppressor of inhibitory function of ChpA	MazE protein	Suppressor of inhibitory function of ChpA, PemI- like, autoregulated	Transcriptional regulator/antitoxin, MazE	Transcriptional regulator/antitoxin, MazE	Transcriptional regulator/antitoxin, MazE	PemI protein 1	Antitoxin of the ChpA-ChpR toxin-antitoxin system	ChpR family protein	PemI protein 1	Transcriptional regulator/antitoxin, MazE	PemI protein 1	Transcriptional regulator/antitoxin, MazE	PemI protein 1	Transcriptional regulator/antitoxin, MazE	PemI protein 1	Suppressor of inhibitor protein	
ECOLI02690	GTP pyrophosphokinase	ATP:GTP 3'-pyrophosphotranferase	Probable guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase	GTP pyrophosphokinase	GTP pyrophosphokinase	GTP pyrophosphokinase	RelA	GTP pyrophosphokinase	GTP pyrophosphokinase	GTP pyrophosphokinase	GTP pyrophosphokinase	putative GTP pyrophosphokinase	GTP pyrophosphokinase	GTP pyrophosphokinase	Putative GTP pyrophosphokinase	Putative GTP pyrophosphokinase	GTP pyrophosphokinase	GTP pyrophosphokinase	GTP pyrophosphokinase	pseudo	RelA/SpoT family protein	GTP pyrophosphokinase (ppGpp synthetase)	GTP pyrophosphokinase	GTP pyrophosphokinase	GTP pyrophosphokinase	GTP pyrophosphokinase	PpGpp 3'-pyrophosphohydrolase	Guanosine polyphosphate pyrophosphohydrolase/synthetase	Residues 1 to 744 of 744 are 100 pct identical to residues 1 to 744 of a 744 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289338.1 (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor	
ECOLI02691	23S rRNA (uracil-5-)-methyltransferase rumA	tRNA methyltransferase, 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair. [Source:SGD;Acc:S000001764]	similar to sp|P33753 Saccharomyces cerevisiae YKR056w RNC1 tRNA(m5U54)methyltransferase, hypothetical start	Uncharacterized RNA methyltransferase GSU1748	23S rRNA (uracil-5-)-methyltransferase rumA	23S rRNA (uracil-5-)-methyltransferase rumA	highly similar to uniprot|P33753 Saccharomyces cerevisiae YKR056w RNC1 tRNA methyltransferase;	DEHA2F20042p;similar to uniprot|P33753 Saccharomyces cerevisiae YKR056W TRM2 tRNA methyltransferase;	Uncharacterized RNA methyltransferase SAV_2389	Uncharacterized RNA methyltransferase EF_2706	Uncharacterized RNA methyltransferase CC_1326	23S rRNA (uracil-5-)-methyltransferase rumA	23S rRNA (uracil-5-)-methyltransferase rumA	Uncharacterized RNA methyltransferase TM_1094	23S rRNA (uracil-5-)-methyltransferase rumA	Uncharacterized RNA methyltransferase LA_0098	23S rRNA (uracil-5-)-methyltransferase rumA	Uncharacterized RNA methyltransferase Cgl1903/cg2084	23S rRNA (uracil-5-)-methyltransferase rumA	putative TrmA family RNA methyltransferase	Uncharacterized RNA methyltransferase Bd3828	23S rRNA (uracil-5-)-methyltransferase rumA	similar to GP:15155704; identified by sequence similarity; putative RNA methyltransferase putative, TrmA family	23S rRNA (uracil-5-)-methyltransferase rumA	23S rRNA (uracil-5-)-methyltransferase rumA	23S rRNA (uracil-5-)-methyltransferase rumA	23S rRNA (uracil-5-)-methyltransferase rumA	Putative ribosomal RNA large subunit methyltransferase	23S rRNA (uracil-5-)-methyltransferase rumA	
ECOLI02692	Signal transduction histidine-protein kinase barA	Sensor protein	Sensor protein	putative sensor histidine kinase/response regulator	Signal transduction histidine-protein kinase barA	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Signal transduction histidine-protein kinase barA	Sensor protein	Residues 1 to 918 of 918 are 99 pct identical to residues 1 to 918 of a 918 aa protein from Escherichia coli O157:H7 ref: NP_311673.1 sensor-regulator protein barA	Sensor protein	Sensor protein	Legionella transmission sensor LetS	conserved gene sensory box histidine kinase/response regulator	Legionella transmission sensor LetS	IPR001789: Response regulator receiver; IPR003594: ATP-binding region, ATPase-like; IPR003660: Histidine kinase, HAMP region;IPR003661: Histidine kinase A, N-terminal;IPR004358: Bacterial sensor protein, C-terminal;IPR005467: Histidine kinase;IPR008207: Hpt sensory histidine kinase	similar to Salmonella typhi CT18 sensor protein sensor protein	Sensor protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme GacS-like sensor kinase protein	sensor protein BarA	Sensor protein	Sensor protein	identified by similarity to SP:P26607; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01627; match to protein family HMM PF02518 sensor histidine kinase/response regulator	identified by similarity to SP:P48027; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01627; match to protein family HMM PF02518 response regulator, sensor histidine kinase component GacS	identified by similarity to SP:P48027; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01627; match to protein family HMM PF02518 sensor protein GacS	Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt	
ECOLI02693	Glucarate dehydratase	Glucarate hydratase	Probable glucarate dehydratase 1	Glucarate dehydratase	Glucarate dehydratase	Glucarate dehydratase	Putative glucarate dehydratase	Glucarate dehydratase	CDS_ID OB2836 glucarate dehydratase	Residues 1 to 446 of 446 are 99 pct identical to residues 1 to 446 of a 446 aa protein from Escherichia coli O157:H7 ref: NP_311674.1 putative glucarate dehydratase	Probable glucarate dehydratase protein	glucarate dehydratase; Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolism (GO:0008152) Mandelate racemase/muconate lactonizing enzyme	IPR001354: Mandelate racemase/muconate lactonizing enzyme d-glucarate dehydratase	similar to Salmonella typhi Ty2 probable glucarate dehydratase 1 probable glucarate dehydratase 1	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme D-glucarate dehydratase	O-succinylbenzoate synthase and related enzymes DgoA protein	Glucarate dehydratase	D-glucarate dehydratase	glucarate hydratase	Glucarate dehydratase	Glucarate dehydratase	Code: MR; COG: COG4948 putative glucarate dehydratase	Code: MR; COG: COG4948 putative glucarate dehydratase	Mandelate racemase/muconate lactonizing enzyme	Mandelate racemase/muconate lactonizing enzyme	Mandelate racemase/muconate lactonizing enzyme- like	Glucarate dehydratase	mandelate racemase/muconate lactonizing enzyme	Glucarate dehydratase	
ECOLI02694	Glucarate dehydratase-related protein	Glucarate dehydratase related protein	Probable glucarate dehydratase	glimmer prediction; start codon changed based on similarity in protein database putative dehydratase	Putative glucarate dehydratase	Residues 1 to 435 of 435 are 98 pct identical to residues 12 to 446 of a 446 aa protein from Escherichia coli K12 ref: NP_417268.1 putative glucarate dehydratase	Putative d-glucarate dehydratase	Code: MR; COG: COG4948 putative glucarate dehydratase	Code: MR; COG: COG4948 putative glucarate dehydratase	Glucarate dehydratase related protein	Glucarate dehydratase related protein	Glucarate dehydratase KEGG: bur:Bcep18194_A3396 glucarate dehydratase	putative glucarate dehydratase Code: MR; COG: COG4948	glucarate dehydratase-related protein	D-glucarate dehydratase	Mandelate racemase/muconate lactonizing protein	Putative (D)-glucarate dehydratase 2	Putative uncharacterized protein	Glucarate dehydratase	Mandelate racemase/muconate lactonizing protein	Predicted glucarate dehydratase	Glucarate dehydratase	Mandelate racemase/muconate lactonizing protein	Glucarate dehydratase	Putative uncharacterized protein	Putative uncharacterized protein	Glucarate dehydratase	Glucarate dehydratase	Glucarate dehydratase	
ECOLI02695	Probable glucarate transporter	similar to ca|CA5240|IPF3032 Candida albicans allantoate permease (by homology), start by similarity	DEHA2C00220p;similar to uniprot|Q12235 Saccharomyces cerevisiae YLL055W;	Transporter	Probable glucarate transporter	Probable glucarate transporter	Probable glucarate transporter	MFS transporter, phthalate permease family	Putative transport protein	Residues 1 to 455 of 455 are 98 pct identical to residues 1 to 450 of a 450 aa protein from Escherichia coli K12 ref: NP_417269.1 putative transport protein	Putative glucarate transporter (D-glucarate permease) transmembrane protein	transporter, putative	glucarate transporter; Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021) D-galactonate transporter	IPR004744: D-galactonate transporter; IPR005828: General substrate transporter; IPR007114: Major facilitator superfamily putative MFS superfamily, D-glucarate permease	Evidence 2b : Function of strongly homologous gene; Product type t : transporter D-glucarate/D-galactarate permease (MFS superfamily)	D-glucarate permease	Putative MFS superfamily D-glucarate permease	go_component: plasma membrane [goid 0005886]; go_function: allantoate transporter activity [goid 0015124]; go_process: allantoate transport [goid 0015719] allantoate transporter, putative	identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00893 MFS transporter, phthalate permease family	D-galactonate transporter	D-galactonate transporter	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	transcript_id=ENSOCUT00000016390	D-galactonate transporter	Probable glucarate transporter	D-galactonate transporter	Probable glucarate transporter	transcript_id=ENSFCAT00000014200	
ECOLI02696	Uncharacterized protein yqcA	Putative uncharacterized protein	hypothetical protein	Hypothetical protein yqcA	Putative uncharacterized protein	Putative flavodoxin	Uncharacterized protein yqcA	Residues 1 to 149 of 149 are 100 pct identical to residues 1 to 149 of a 149 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289345.1 orf, conserved hypothetical protein	Flavodoxins	Similar to unknown protein YqcA of Escherichia coli	IPR001094: Flavodoxin-like domain; IPR008254: Flavodoxin/nitric oxide synthase putative MFS superfamily, D-glucarate permease	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	MioC protein	Putative MFS superfamily D-glucarate permease	identified by similarity to SP:P03817; match to protein family HMM PF00258 flavodoxin, putative	Flavodoxin/nitric oxide synthase	Code: C; COG: COG0716 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy putative flavoprotein	Code: C; COG: COG0716 conserved hypothetical protein	conserved hypothetical protein	flavodoxin/nitric oxide synthase	Flavodoxin/nitric oxide synthase	Flavodoxins COG0716	Code: C; COG: COG0716; orf conserved hypothetical protein	Putative uncharacterized protein	Flavodoxin/nitric oxide synthase	Flavodoxin/nitric oxide synthase	Hypothetical protein	
ECOLI02697	tRNA pseudouridine synthase C	tRNA pseudouridine synthase C	tRNA pseudouridine synthase C	Pseudouridine synthase	tRNA pseudouridine synthase C	Pseudouridine synthase	putative pseudouridine synthase Rlu family protein	Pseudouridine synthase	tRNA pseudouridine synthase C	tRNA pseudouridine synthase C	Pseudouridine synthase	tRNA pseudouridine synthase C	tRNA pseudouridine synthase C	tRNA pseudouridine synthase C	Residues 1 to 260 of 260 are 100 pct identical to residues 1 to 260 of a 260 aa protein from Escherichia coli K12 ref: NP_417271.1 orf, conserved hypothetical protein	tRNA pseudouridine synthase C	Putative uncharacterized protein	Pseudouridine synthase	Pseudouridine synthase	IPR006145: Pseudouridine synthase; IPR006224: Pseudouridine synthase, Rlu putative synthase	similar to Salmonella typhi CT18 putative RNA pseudouridylate synthase putative RNA pseudouridylate synthase	Pseudouridine synthase	conserved hypothetical protein	Pseudouridine synthase	Ortholog of S. aureus MRSA252 (BX571856) SAR1941 RNA pseudouridylate synthase	conserved hypothetical protein	tRNA pseudouridine synthase C	pseudouridylate synthase; uracil hydrolyase; Similar to: HI1435, TRUC_HAEIN tRNA pseudouridine synthase C	Predicted pseudouridylate synthase, Rlu family	
ECOLI02698	Uncharacterized protein yqcC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV2562	Putative uncharacterized protein yqcC	conserved hypothetical protein	Hypothetical protein yqcC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2323	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 109 of 109 are 99 pct identical to residues 1 to 109 of a 109 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289347.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YqcC of Escherichia coli	IPR007384: Protein of unknown function DUF446 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	Similar to: HI1436, YQCC_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved protein	Putative cytoplasmic protein	conserved hypothetical protein	identified by match to protein family HMM PF04287 tRNA pseudouridine synthase C (Pseudouridine synthase)(Uracil hydrolyase)	identified by match to protein family HMM PF04287 Domain of unknown function, DUF445 superfamily	Protein of unknown function DUF446	

ECOLI02699	Protein syd	Protein syd	hypothetical Syd protein	Protein syd	Protein syd	Protein syd	Protein syd	Protein syd	Protein syd	Protein syd	Residues 1 to 181 of 181 are 98 pct identical to residues 1 to 181 of a 181 aa protein from Escherichia coli K12 ref: NP_417273.1 interacts with secY	Protein syd	Protein syd	interacts with secY	similar to Salmonella typhi CT18 syd protein syd protein	Protein syd	Syd protein	interacts with secY Syd	Protein syd	identified by similarity to SP:P43526 putative syd protein	interacts with secY	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9668058; Product type f : factor Syd protein	interacts with secY	Syd family protein	interacts with secY Syd	Protein syd	Syd	Syd family protein	Syd protein	
ECOLI02700	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	conserved hypothetical protein	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	NADPH-dependent 7-cyano-7-deazaguanine reductase	Residues 1 to 282 of 282 are 99 pct identical to residues 1 to 282 of a 282 aa protein from Escherichia coli K12 ref: NP_417274.1 orf, conserved hypothetical protein	NADPH-dependent 7-cyano-7-deazaguanine reductase	
ECOLI02701	UPF0717 protein ygdH	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted Rossmann fold nucleotide-binding protein	Putative uncharacterized protein STY3108	conserved hypothetical protein	Hypothetical protein ygdH	Putative uncharacterized protein	Putative uncharacterized protein	Lysine decarboxylase family protein	Decarboxylase family protein	Putative uncharacterized protein VP0698	UPF0717 protein ygdH	Predicted Rossmann fold nucleotide-binding protein	Residues 1 to 454 of 454 are 99 pct identical to residues 1 to 454 of a 454 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289350.1 orf, conserved hypothetical protein	Predicted Rossmann fold nucleotide-binding protein	Similar to unknown protein YgdH of Escherichia coli	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR005269: Conserved hypothetical protein 730 putative nucleotide binding	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Decarboxylase family protein	conserved hypothetical protein	Predicted Rossmann fold nucleotide-binding protein Hypothetical protein	Decarboxylase family protein	Protein containing a predicted nucleotide-binding domain of Rossmann fold	
ECOLI02702	Serine transporter	Putative serine transporter	Serine transporter	putative serine transporter	Serine transporter	serine transporter VC1301 [imported]	Serine transporter	Serine transporter	Serine transporter	Residues 1 to 429 of 429 are 98 pct identical to residues 1 to 429 of a 429 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289351.1 probable serine transporter	Serine transporter	SdaC protein	Serine transporter SdaC protein	Similar to serine transporter hypothetical protein	conserved gene serine transporter	Similar to serine transporter hypothetical protein	Serine transporter	Serine transporter	identified by similarity to SP:P36559 serine transporter	IPR002091: Aromatic amino acid permease; IPR002422: Amino acid/polyamine transporter, family II; IPR004694: Serine transporter putative HAAAP family, serine transport protein	similar to Salmonella typhi CT18 putative serine transporter putative serine transporter	Serine transporter	HAAAP family serine transporter (Serine:H+ symporter), sdaC	Putative HAAAP family serine transport protein	serine transporter	serine transporter SdaC	Code: E; COG: COG0814 probable serine transporter	Code: E; COG: COG0814 probable serine transporter	serine transport protein	
ECOLI02703	L-serine dehydratase 2	L-serine dehydratase 2	L-serine dehydratase 2	L-serine dehydratase (Deaminase), L-SD2	Residues 1 to 455 of 455 are 99 pct identical to residues 1 to 455 of a 455 aa protein from Escherichia coli K12 ref: NP_417277.1 L-serine dehydratase (deaminase), L-SD2	L-serine dehydratase	IPR004644: Iron-sulfur-dependent L-serine dehydratase single chain form; IPR005130: Serine dehydratase alpha chain; IPR005131: Serine dehydratase beta chain L-serine dehydratase (L-threonine deaminase 2)	similar to Salmonella typhi CT18 L-serine dehydratase 2 (L-serine deaminase 2) L-serine dehydratase 2 (L-serine deaminase 2)	L-serine dehydratase	deaminase; L-SD2; Code: E; COG: COG1760 L-serine dehydratase	deaminase; L-SD2; Code: E; COG: COG1760 L-serine dehydratase	deaminase, L-SD2; Code: E; COG: COG1760 L-serine dehydratase	pseudo	L-serine dehydratase (Deaminase), L-SD2	L-serine dehydratase 2	Serine dehydratase alpha chain	L-serine dehydratase (deaminase), L-SD2 Code: E; COG: COG1760	L-serine deaminase II	L-serine dehydratase 1	L-serine deaminase 2	Putative uncharacterized protein	L-serine dehydratase 2	L-serine dehydratase 1	L-serine deaminase II	L-serine ammonia-lyase	L-serine dehydratase 1	L-serine ammonia-lyase 2	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02704	Uncharacterized exonuclease xni	Probable 5'-3' exonuclease	5'-3' exonuclease	Putative 5'-3' exonuclease	5'-3' exonuclease	Uncharacterized exonuclease xni	Uncharacterized exonuclease xni	5'-3' exonuclease family protein	Lmo1881 protein	5'-3' exonuclease	5'-3' exonuclease	putative exodeoxyribonuclease IX	Exodeoxyribonuclease IX	identified by match to protein family HMM PF01367; match to protein family HMM PF02739 5'-3' exonuclease family protein	Uncharacterized exonuclease xni	Uncharacterized exonuclease xni	Uncharacterized exonuclease xni	DNA polymerase I	5'-3' exonuclease	DNA polymerase I: 5'-3' exonuclease	DNA polymerase I	Uncharacterized exonuclease xni	Uncharacterized exonuclease xni	CDS_ID OB1701 5'-3' exonuclease	5'-3' exonuclease	5'-3' exonuclease	5'-3' exonuclease	Exo	Uncharacterized exonuclease xni	
ECOLI02705	Lactaldehyde reductase	Possible lactaldehyde reductase	Alcohol dehydrogenase, iron-containing	1,2-propanediol oxidoreductase	Lactaldehyde reductase	Lactaldehyde reductase	Lactaldehyde reductase	alcohol dehydrogenase	Lactaldehyde reductase	Residues 1 to 383 of 383 are 99 pct identical to residues 1 to 383 of a 383 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289354.1 L-1,2-propanediol oxidoreductase	Iron-containing alcohol dehydrogenase	alcohol dehydrogenase	IPR001670: Iron-containing alcohol dehydrogenase L-1,2-propanediol oxidoreductase	similar to Salmonella typhi CT18 1,2-propanediol oxidoreductase (lactaldehyde reductase) 1,2-propanediol oxidoreductase (lactaldehyde reductase)	similar to sp:P94135 Maleylacetate reductase II (EC 1.3.1.32) dehydrogenase	Similar to Escherichia coli, and Escherichia coli O157:H7 lactaldehyde reductase FucO or B2799 or Z4116 or ECS3659 SWALL:FUCO_ECOLI (SWALL:P11549) (383 aa) fasta scores: E(): 1.3e-74, 55.87% id in 383 aa, and to Bacteroides thetaiotaomicron lactaldehyde reductase BT3767 SWALL:AAO78872 (EMBL:AE016942) (384 aa) fasta scores: E(): 2.7e-88, 64.15% id in 385 aa, and to Salmonella typhimurium L-1,2-propanediol oxidoreductase FucO or STM2973 SWALL:Q8ZMC8 (EMBL:AE008836) (382 aa) fasta scores: E(): 4e-77, 56.91% id in 383 aa putative lactaldehyde reductase	Alcohol dehydrogenase IV EutG protein	1,3-propanediol dehydrogenase	L-1,2-propanediol oxidoreductase	Code: C; COG: COG1454 L-1,2-propanediol oxidoreductase	Alcohol dehydrogenase, class IV COG1454	Code: C; COG: COG1454 L-1,2-propanediol oxidoreductase	alcohol dehydrogenase, iron-containing	Lactaldehyde reductase	lactaldehyde reductase identified by match to protein family HMM PF00465; match to protein family HMM TIGR02638	lactaldehyde reductase identified by similarity to SP:P11549; match to protein family HMM PF00465; match to protein family HMM TIGR02638	Lactaldehyde reductase	iron-containing alcohol dehydrogenase PFAM: iron-containing alcohol dehydrogenase KEGG: cch:Cag_1128 alcohol dehydrogenase, iron-containing	possible lactaldehyde reductase COG family:alcohol dehydrogenase IV Orthologue of BL1673 PFAM_ID: Fe-ADH Propanediol oxidoreductase	
ECOLI02706	L-fuculose phosphate aldolase	L-fuculose phosphate aldolase	Fuculose-1-phosphate aldolase	L-fuculose phosphate aldolase	Fuculose-1-phosphate aldolase	Putative fuculose-1-phosphate aldolase	L-fuculose-phosphate aldolase	Ribulose-5-phosphate 4-epimerase	Fuculose-1-phosphate aldolase	Aldolase, class II	L-fuculose phosphate aldolase	L-fuculose phosphate aldolase	L-fuculose phosphate aldolase	L-fuculose phosphate aldolase	L-fuculose phosphate aldolase	identified by match to protein family HMM PF00596 L-fuculose phosphate aldolase	similar to GP:15075256, GB:X12466, GB:M37716, GB:M15919, SP:P08578, PID:338267, PID:338269, and PID:35105; identified by sequence similarity; putative L-fuculose phosphate aldolase, putative	L-fuculose phosphate aldolase	L-FUCULOSE PHOSPHATE ALDOLASE	L-fuculose phosphate aldolase	L-fuculose phosphate aldolase	SCI8.29c, possible aldolase, len: 240 aa. Similar to many aldolases e.g. Escherichia coli SW:FUCA_ECOLI (EMBL: M31059) L-fuculose phosphate aldolase (EC 4.1.2.17) (215 aa), fasta scores opt: 485 z-score: 552.3 E(): 2.1e-23 42.3% identity in 194 aa overlap. Contains a Pfam match to entry PF00596 Aldolase_II, Class II Aldolase and Adducin N-terminal domain. putative aldolase	Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases	Residues 1 to 215 of 215 are 100 pct identical to residues 1 to 215 of a 215 aa protein from Escherichia coli K12 ref: NP_417280.1 L-fuculose-1-phosphate aldolase	L-fuculose-phosphate aldolase protein	POSSIBLE L-FUCULOSE PHOSPHATE ALDOLASE FUCA	IPR001303: Class II aldolase/adducin, N-terminal L-fuculose-1-phosphate aldolase	similar to Salmonella typhi CT18 fuculose-1-phosphate aldolase fuculose-1-phosphate aldolase	similar to BRA1110, L-fuculose phosphate aldolase, hypothetical hypothetical L-fuculose phosphate aldolase	
ECOLI02707	L-fucose-proton symporter	L-fucose permease	L-fucose permease	conserved hypothetical protein	Fucose permease	Residues 1 to 438 of 438 are 99 pct identical to residues 1 to 438 of a 438 aa protein from Escherichia coli K12 ref: NP_417281.1 fucose permease	identified by match to protein family HMM PF00083; match to protein family HMM TIGR00885 L-fucose permease	IPR005275: L-fucose permease; IPR005828: General substrate transporter; IPR007114: Major facilitator superfamily L-fucose permease	similar to Salmonella typhi Ty2 L-fucose permease L-fucose permease	l-fucose permease, putative	Code: G; COG: COG0738 fucose permease	fucose transport protein	L-fucose permease	L-fucose permease	Major Facilitator Superfamily protein identified by match to protein family HMM PF07690	fucose permease	L-fucose:H+ symporter permease identified by match to protein family HMM PF07690; match to protein family HMM TIGR00885	fucose permease Code: G; COG: COG0738	L-fucose permease Glucose/galactose transporter L-fucose permease Glucose/galactose transporter (bacterial)	L-fucose permease	Magnaporthe grisea hypothetical protein	Botrytis cinerea hypothetical protein	Fucose permease	ustilago_maydis hypothetical protein	L-fucose permease	Putative membrane protein	Fucose permease	Putative uncharacterized protein	L-fucose:H+ symporter permease	
ECOLI02708	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase	Residues 1 to 591 of 591 are 100 pct identical to residues 1 to 591 of a 591 aa protein from Escherichia coli K12 ref: NP_417282.1 L-fucose isomerase	IPR004216: L-fucose isomerase, C-terminal; IPR005763: L-fucose isomerase L-fucose isomerase	similar to Salmonella typhi CT18 L-fuculose isomerase L-fuculose isomerase	L-fucose isomerase	Similar to: HI0614, FUCI_HAEIN L-fucose isomerase	Similar to Escherichia coli, and Shigella flexneri L-fucose isomerase FucI or B2802 or SF2816 SWALL:FUCI_ECOLI (SWALL:P11552) (591 aa) fasta scores: E(): 4.7e-158, 63% id in 592 aa, and to Bacteroides thetaiotaomicron L-fucose isomerase FucI or BT1273 SWALL:Q9RQ13 (EMBL:AF137263) (591 aa) fasta scores: E(): 0, 90.52% id in 591 aa, and to Bacteroides thetaiotaomicron L-fucose isomerase FucI or BT1273 SWALL:AAO76380 (EMBL:AF137263) (591 aa) fasta scores: E(): 0, 90.52% id in 591 aa putative L-fucose isomerase	L-fucose isomerase	Code: G; COG: COG2407 L-fucose isomerase	L-fucose isomerase	Code: G; COG: COG2407 L-fucose isomerase	L-fucose isomerase	L-fucose isomerase identified by similarity to SP:P11552; match to protein family HMM PF02952; match to protein family HMM PF07881; match to protein family HMM PF07882; match to protein family HMM TIGR01089	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase Code: G; COG: COG2407	L-fucose isomerase equivalent gene in S.pneumoniae TIGR4 = SP2158; equivalent gene in S.pneumoniae R6 = spr1964; identified by match to protein family HMM PF02952; match to protein family HMM PF07881; match to protein family HMM PF07882; match to protein family HMM TIGR01089	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase	L-fucose isomerase	
ECOLI02709	L-fuculokinase	Putative uncharacterized protein VV2178	L-fuculokinase	L-fuculokinase	IPR000577: Carbohydrate kinase, FGGY L-fuculokinase	similar to Salmonella typhi CT18 L-fuculose kinase L-fuculose kinase	L-fuculose kinase; Similar to: HI0613, FUCK_HAEIN L-fuculokinase	L-fuculokinase	Code: G; COG: COG1070 L-fuculokinase	L-fuculokinase	Xylulokinase	Code: G; COG: COG1070 L-fuculokinase	L-fuculokinase	L-fuculokinase	L-fuculokinase	L-fuculokinase	L-fuculokinase	L-fuculokinase	L-fuculokinase	Putative uncharacterized protein	L-fuculokinase	L-fuculokinase	L-fuculokinase	L-fuculokinase	L-fuculokinase	L-fuculo kinase	L-fuculokinase	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02710	L-fucose mutarotase	Fucose dissimilation pathway protein FucU	L-fucose mutarotase	Fucose operon fucU protein	Fucose operon FucU protein	fucose operon fucU protein	FUCOSE OPERON FUCU PROTEIN	L-fucose mutarotase	Residues 1 to 140 of 140 are 99 pct identical to residues 1 to 140 of a 140 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289359.1 protein of fucose operon	Fucose dissimilation pathway protein	IPR007721: RbsD or FucU transport conserved protein of fucose operon	similar to Salmonella typhi CT18 fuscose operon fucU protein fuscose operon fucU protein	similar to BR1337, fucose operon fucU protein FucU, fucose operon fucU protein	Fucose pathway protein, function unknown	Similar to: HI0612, FUCU_HAEIN fucose operon protein FucU	L-fucose mutarotase	Code: G; COG: COG4154 protein of fucose operon	RbsD or FucU transport	Code: G; COG: COG4154 protein of fucose operon	Protein fucU homolog  [Source:UniProtKB/Swiss- Prot;Acc:A2VDF0]	fucose operon protein	RbsD or FucU transport associated protein	Code: G; COG: COG4154 protein of fucose operon	putative fucose operon protein similarity:fasta; with=UniProt:FUCU_ECOLI (EMBL:H65062); Escherichia coli O157:H7.; fucU; Fucose operon fucU protein.; length=140; id 47.143; 140 aa overlap; query 1-139; subject 1-138 similarity:fasta; with=UniProt:Q982U4 (EMBL:BA000012); Rhizobium loti (Mesorhizobium loti).; Mlr8491 protein.; length=150; id 46.622; 148 aa overlap; query 1-142; subject 1-147	RbsD or FucU transport	fucose dissimilation pathway protein similar to fucU (b2804) [Escherichia coli] and BMEI0667 [Brucella melitensis] Similar to entrez-protein:P11555 Putative location:bacterial cytoplasm Psort-Score: 0.1699; go_process: fucose metabolism [goid 0006004]	transcript_id=ENSGACT00000008997	L-fucose mutarotase	fucose operon protein FucU identified by similarity to SP:P11555; match to protein family HMM PF05025	
ECOLI02711	L-fucose operon activator	L-fucose operon activator	L-fucose operon activator	Positive regulator of the fuc operon	Residues 4 to 246 of 246 are 100 pct identical to residues 1 to 243 of a 243 aa protein from Escherichia coli K12 ref: NP_417285.1 positive regulator of the fuc operon	IPR001034: Bacterial regulatory protein, DeoR family positive regulator of the fuc operon (DeoR family)	similar to Salmonella typhi CT18 l-fucose operon activator l-fucose operon activator	Putative deoR-family sugar uptake regulatory protein	Similar to: HI0615, FUCR_HAEIN L-fucose operon activator	Positive regulator of the fuc operon	Code: KG; COG: COG1349 positive regulator of the fuc operon	Code: KG; COG: COG1349 positive regulator of the fuc operon	L-fucose operon regulator	Code: KG; COG: COG1349 positive regulator of the fuc operon	L-fucose operon activator	L-fucose operon activator	positive regulator of the fuc operon Code: KG; COG: COG1349	L-fucose operon activator	L-fucose isomerase	Transcriptional regulator, DeoR family	Positive regulator of the fuc operon	Putative uncharacterized protein	L-fucose operon activator	Transcriptional regulator, DeoR family	DNA-binding transcriptional activator	Transcriptional regulator, DeoR family	L-fucose operon activator	Transcriptional regulator, DeoR family	L-fucose operon activator	
ECOLI02712	Putative RNA 2'-O-ribose methyltransferase ygdE	Putative RNA 2'-O-ribose methyltransferase XCC0816	Putative RNA 2'-O-ribose methyltransferase HI1195	Putative RNA 2'-O-ribose methyltransferase PM0568	Putative RNA 2'-O-ribose methyltransferase PA1563	Putative RNA 2'-O-ribose methyltransferase mtfA	Putative RNA 2'-O-ribose methyltransferase ygdE	putative SAM-dependentmethyltransferase	Putative RNA 2'-O-ribose methyltransferase mtfA	Putative RNA 2'-O-ribose methyltransferase mtfA	Ribosomal RNA large subunit methyltransferase M	Ribosomal RNA large subunit methyltransferase M	Ribosomal RNA large subunit methyltransferase M	Ribosomal RNA large subunit methyltransferase M	Ribosomal RNA large subunit methyltransferase M	Residues 1 to 366 of 366 are 99 pct identical to residues 1 to 366 of a 366 aa protein from Escherichia coli O157:H7 ref: NP_311693.1 orf, conserved hypothetical protein	Putative RNA 2'-O-ribose methyltransferase YPO1031/y3152/YP_2820	Ribosomal RNA large subunit methyltransferase M	Ribosomal RNA large subunit methyltransferase M	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative SAM-dependent methyltransferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Ribosomal RNA large subunit methyltransferase M	Putative RNA 2'-O-ribose methyltransferase YPTB3015	Ribosomal RNA large subunit methyltransferase M	methyltransferase	Similar to: HI1195, YGDE_HAEIN predicted SAM-dependent methyltransferase	Predicted SAM-dependent methyltransferase Hypothetical protein	Ribosomal RNA large subunit methyltransferase M	
ECOLI02713	UPF0382 inner membrane protein ygdD	UPF0382 membrane protein HI1073	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized small membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein STY3121	Alr3204 protein	Putative uncharacterized protein	Lmo0666 protein	Hypothetical Membrane Spanning Protein	Putative uncharacterized protein	conserved hypothetical protein	UPF0382 inner membrane protein ygdD	identified by match to protein family HMM PF04241 conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	PMID: 7542800 best DB hits: BLAST: swissprot:P45019; YGDD_HAEIN HYPOTHETICAL PROTEIN HI1073 -----; E=6e-10 pir:C83599; conserved hypothetical protein PA0379 [imported] -; E=2e-09 embl:CAB63338.1; (AL032631) Y106G6H.8 [Caenorhabditis elegans]; E=3e-09 COG: HI1073; COG2363 Uncharacterized small membrane protein; E=6e-11 conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	hypothetical protein	hypothetical conserved protein	Putative uncharacterized protein VP0694	UPF0382 inner membrane protein ygdD	
ECOLI02714	Glycine cleavage system transcriptional activator	GcvA	Transcriptional regulator	Transcriptional regulator, LysR family	Regulatory protein for glycine cleavage pathway	Putative LysR family transcriptional regulator	putative transcriptional regulator, LysR family	Glycine cleavage system transcriptional activator	Transcriptional regulator, LysR family	Glycine cleavage system transcriptional activator, putative	Glycine cleavage system transcriptional activator	Transcriptional regulator, LysR family	Glycine cleavage system transcriptional activator	Transcriptional regulator	Residues 1 to 305 of 305 are 99 pct identical to residues 1 to 305 of a 305 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289363.1 positive regulator of gcv operon	Glycine cleavage system transcriptional activator	Glycine cleavage system transcriptional activator	Transcription regulator	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain regulator of gcv operon (LysR family)	similar to Salmonella typhi CT18 regulatory protein for glycine cleavage pathway regulatory protein for glycine cleavage pathway	Glycine cleavage system transcriptional activator	glycine cleavage system transcriptional activator	Similar to: HI1194, GCVA_HAEIN glycine cleavage system transcriptional activator	Transcriptional regulator, LysR family	Regulator of gcv operon	identified by similarity to SP:P32064; match to protein family HMM PF00126; match to protein family HMM PF03466 glycine cleavage system transcriptional activator	Code: K; COG: COG0583 positive regulator of gcv operon	Putative transcriptional regulator, LysR family	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8188587; Product type f : factor transcriptional regulator (postitive) of cleavage of glycine (LysR family)	

ECOLI02715	Uncharacterized lipoprotein ygdI	Hypothetical lipoprotein ygdI precursor	Putative lipoprotein	Putative uncharacterized protein	Residues 1 to 76 of 76 are 97 pct identical to residues 1 to 76 of a 76 aa protein from Escherichia coli O157:H7 ref: NP_311696.1 orf, conserved hypothetical protein	putative lipoprotein	similar to Salmonella typhi CT18 possible lipoprotein possible lipoprotein	Putative lipoprotein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative lipoprotein	Putative uncharacterized protein	Lipoprotein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ygdI	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein precursor	Predicted protein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Possible lipoprotein	
ECOLI02716	Cysteine sulfinate desulfinase	Probable cysteine desulfurase	Probable cysteine desulfurase	Probable cysteine desulfurase	Selenocysteine lyase	Possible aminotransferase	putative aminotransferase, class V	Cysteine sulfinate desulfinase	Probable cysteine desulfurase	Cysteine sulfinate desulfinase	Cysteine sulfinate desulfinase	Aminotransferase protein S homolog	Cysteine desulfurase	Putative uncharacterized protein	Similar to selenocysteine lyase, class V pyridoxal phosphate aminotransferase, cysteine desulfurase	Probable cysteine desulfurase	Selenocysteine lyase	Residues 13 to 413 of 413 are 98 pct identical to residues 1 to 401 of a 401 aa protein from Escherichia coli K12 ref: NP_417290.1 orf, conserved hypothetical protein	Putative aminotransferase class V	Cysteine sulfinate desulfinase	IPR000192: Aminotransferase, class V putative selenocysteine lyase	similar to Salmonella typhi CT18 possible aminotransferase possible aminotransferase	Putative aminotransferase class V	selenocysteine lyase cysteine desulfhydrase	Similar to: HI1295, CSD_HAEIN predicted selenocysteine lyase	Selenocysteine lyase CsdB protein	Probable cysteine desulfurase	Putative selenocysteine lyase	putative aminotransferase	
ECOLI02717	Uncharacterized sufE-like protein ygdK	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Putative uncharacterized protein STY3125	conserved hypothetical protein	Hypothetical protein ygdK	Putative uncharacterized protein	Putative uncharacterized protein	Putative Fe-S metabolism associated protein	Putative uncharacterized protein VP2367	Uncharacterized sufE-like protein ygdK	SufE protein probably involved in Fe-S center assembly	Residues 1 to 147 of 147 are 98 pct identical to residues 1 to 147 of a 147 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289366.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to hypothetical protein YgdK of Escherichia coli	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR003808: Protein of unknown function UPF0050 putative SufE protein probably involved in Fe-S center assembly	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	COG2166 Fe-S center assembly protein	Similar to: HI1293, YC93_HAEIN predicted SufE protein probably involved in Fe-S center assembly	SufE protein probably involved in Fe-S center assembly Hypothetical protein	Putative uncharacterized protein	SufE-like protein probably involved in Fe-S center assembly	Putative SufE protein probably involved in Fe-S center assembly	conserved hypothetical protein	identified by match to protein family HMM PF02657 sufE protein	
ECOLI02718	Uncharacterized protein ygdL	ThiF family protein	Molybdopterin biosynthesis protein	Molybdopterin biosynthesis protein	Uncharacterized protein HI0118	ThiF family protein, putative dinucleotide- utilizing enzyme involved in molybdopterin and thiamine biosynthesis	Putative uncharacterized protein CPE0057	HesA/MoeB/ThiF family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative MoeB/ThiF family protein	HesA/MoeB/ThiF family protein	Putative uncharacterized protein STY3127	HesA/moeB/thiF family protein	Putative uncharacterized protein	Putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis	Molybdopterin biosynthesis MoeB protein	HesA/moeB/thiF family protein	ThiF family protein	putative HesA/MoeB/ThiF family protein	THIF family protein	Hypothetical protein ygdL	identified by match to protein family HMM PF00899 hesA/moeB/thiF family protein	HesA/MoeB/ThiF family protein	Putative uncharacterized protein	Putative uncharacterized protein	HesA/MoeB/ThiF family protein	Putative uncharacterized protein	Dinucleotide-utilizing enzyme	
ECOLI02719	Membrane-bound lytic murein transglycosylase A	Transglycosylase, putative	Putative membrane-bound lytic murein transglycosylase A	Putative uncharacterized protein	Probable membrane-bound lytic murein transglycolase A	Membrane-bound lytic murein transglycosylase	Membrane-bound lytic murein transglycosylase A	Alr0564 protein	Putative outer membrane-bound lytic murein transglycosylase	putative membrane-bound lytic murein transglycosylase A	Membrane-bound lytic murein transglycosylase A	Membrane-bound lytic murein transglycosylase A	Putative membrane-bound transglycolase	Putative membrane-bound transglycolase	Membrane-bound lytic murein transglycosylase A	Membrane-bound lytic murein transglycosylase A homolog	Putative membrane-bound transglycolase	hypothetical protein	Putative membrane-bound lytic murein transglycosylase A	Membrane-bound lytic murein transglycosylase A	Membrane-bound lytic murein transglycosylase A	Membrane-bound lytic murein transglycosylase A homolog	Membrane-bound lytic murein transglycosylase	Residues 1 to 398 of 398 are 99 pct identical to residues 35 to 432 of a 432 aa protein from Escherichia coli gb: AAB40463.1 orf, conserved hypothetical protein	Membrane-bound lytic murein transglycosylase A	Putative membrane-bound lytic murein transglycosylase a transmembrane protein	Membrane-bound lytic murein transglycosylase A	identified by match to protein family HMM PF03562; match to protein family HMM PF06725 MltA/3D domain protein	IPR005300: MltA family membrane-bound lytic murein transglycosylase A	
ECOLI02720	N-acetylmuramoyl-L-alanine amidase amiC	N-acetylmuramoyl-L-alanine amidase, family 3	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase amiC	N-acetylmuramoyl-L-alanine amidase	Putative N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase amiC precursor	identified by match to PFAM protein family HMM PF01520 N-acetylmuramoyl-L-alanine amidase, family 3	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	Product confidence : probable Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMIC PRECURSOR TRANSMEMBRANE PROTEIN	N-acetylmuramoyl-L-alanine amidase	N-ACETYLMURAMOYL-L-ALANINE AMIDASE	N-acetylmuramoyl-L-alanine amidase	N-ACETYLMURAMOYL-L-ALANINE AMIDASE	Putative amidase	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	Putative N-acetylmuramoyl-L-alanine amidase	Residues 1 to 447 of 447 are 99 pct identical to residues 1 to 447 of a 447 aa protein from Escherichia coli O157:H7 ref: NP_311701.1 putative amidase	N-acetylmuramoyl-L-alanine amidase AmiC	Cell wall hydrolase/autolysin	B2817 protein	Probable n-acetylmuramoyl-l-alanine amidase amic protein	N-acetylmuramoyl-L-alanine amidase	similar to N-acetylmuramoyl-L-alanine amidase hypothetical protein	conserved gene N-acetylmuramoyl-L-alanine amidase	
ECOLI02721	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Putative amino-acid acetyltransferase	putative N-acetylglutamate synthase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	pseudo	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid N-acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Residues 23 to 465 of 465 are 99 pct identical to residues 1 to 443 of a 443 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289370.1 N-acetylglutamate synthase; amino acid acetyltransferase	Amino-acid acetyltransferase	GCN5-related N-acetyltransferase:Aspartokinase superfamily	Amino-acid acetyltransferase	Amino-acid acetyltransferase	Amino-acid N-acetyltransferase	IPR000182: GCN5-related N-acetyltransferase; IPR001048: Aspartate/glutamate/uridylate kinase N-alpha-acetylglutamate synthase (amino-acid acetyltransferase)	
ECOLI02722	Exodeoxyribonuclease V alpha chain	Exodeoxyribonuclease V alpha chain	Exodeoxyribonuclease V alpha chain	Exodeoxyribonuclease V alpha chain	similar to GB:J02938, GB:U13680, GB:X15954, GB:X15957, SP:P07864, PID:187074, PID:307120,  and PID:535360; identified by sequence similarity; putative exodeoxyribonuclease V, alpha subunit, putative	Exodeoxyribonuclease V, alpha subunit	Probable exodeoxyribonuclease V, alpha subunit RecD	Possible exodeoxyribonuclease V 67 kD polypeptide	Exodeoxyribonuclease V, alpha subunit	RecD	Exodeoxyribonuclease V alpha chain	ATP-dependent exoDNAse alpha subunit	ATP-dependent exoDNAse, alpha subunit	Exonuclease V alpha-subunit	Related to exodeoxyribonuclease V, alpha chain	putative exodeoxyribonuclease V, 67 kDa subunit	Exodeoxyribonuclease V, alpha chain	Exodeoxyribonuclease V alpha chain	Exodeoxyribonuclease V, 67 kDa subunit	Exodeoxyribonuclease V, alpha subunit	Exodeoxyribonuclease V alpha chain	Exodeoxyribonuclease V alpha chain	Exodeoxyribonuclease V, alpha subunit	Putative RecD protein	Exonuclease V, alpha chain	Exodeoxyribonuclease V, 67 kDa subunit	DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease	Putative exodeoxyribonuclease V alpha chain recD	Exodeoxyribonuclease V alpha chain	
ECOLI02723	Exodeoxyribonuclease V beta chain	Exodeoxyribonuclease V, beta subunit	Exodeoxyribonuclease V beta chain	Exodeoxyribonuclease V beta chain	Exodeoxyribonuclease V beta chain	similar to GB:X02415, GB:X51473, GB:K02569, SP:P02679, SP:P04469, PID:182439, PID:182440, PID:182442, PID:182443, PID:577054, PID:577055,  and PID:930064; identified by sequence similarity; putative exodeoxyribonuclease V, beta chain, putative	Probable exodeoxyribonuclease V, beta subunit RecB	Possible UvrD/REP helicase subunit B	Exodeoxyribonuclease V 135 KD polypeptide	RecB	Exodeoxyribonuclease V beta chain	ATP-dependent exoDNAse beta subunit	Exonuclease V subunit	Related to exodeoxyribonuclease V, beta chain	ATP-dependent helicase/nuclease subunit A	ATP-dependent helicase/nuclease subunit A	putative exodeoxyribonuclease V	Exodeoxyribonuclease V beta chain	Exodeoxyribonuclease V beta chain	Exodeoxyribonuclease V beta chain	Exodeoxyribonuclease V, beta subunit	ATP-dependent DNA helicase, UvrD/REP family	Exodeoxyribonuclease V, 135 kDa subunit	Exodeoxyribonuclease V, beta subunit	Exodeoxyribonuclease V beta chain	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ATP-DEPENDENT NUCLEASE/HELICASE PROTEIN	Exodeoxyribonuclease V beta chain	Exodeoxyribonuclease V, beta subunit	UvrD/REP helicase domain protein	
ECOLI02724	Protease 3	similar to sp|Q06010 Saccharomyces cerevisiae YLR389c STE23 protease involved in a-factor processing, start by similarity	ZINC PROTEASE (INSULINASE FAMILY);06_0750, ZINC PROTEASE (INSULINASE FAMILY), IDE_DROME, gene found by Glimmer;	similar to GP:184556; identified by sequence similarity; putative metalloprotease, insulinase family	Protease 3	Protein-degrading enzyme-like protein	Protease 3 precursor	Metalloprotease, insulinase family	Protease III	Protease 3	Residues 1 to 962 of 962 are 99 pct identical to residues 1 to 962 of a 962 aa protein from Escherichia coli K12 ref: NP_417298.1 protease III	Insulinase family/Protease III	Protease III	Protease III	IPR001431: Peptidase M16, insulinase-like; IPR007863: Peptidase M16 inactive protease III	similar to Salmonella typhi CT18 protease III precursor (pitrilysin) protease III precursor (pitrilysin)	Similar to Vibrio parahaemolyticus peptidase, insulinase family VP2206 SWALL:Q87MM5 (EMBL:AP005080) (925 aa) fasta scores: E(): 3.3e-48, 24.7% id in 927 aa, and to Shewanella oneidensis peptidase, M16 family SO3083 SWALL:Q8ECQ2 (EMBL:AE015745) (929 aa) fasta scores: E(): 1.7e-41, 23.1% id in 896 aa putative exported peptidase	Protease III	LmjF31.3090, predicted protein, len = 1131 aa, possibly protease enzyme; predicted pI = 5.0006; reasonable similarity to many proteins with a Peptidase family M16 domain peptidase, putative metallo-peptidase, Clan ME, Family M16	Secreted Zn-dependent peptidase, insulinase family	Protease 3	identified by similarity to SP:P35559; match to protein family HMM PF00675; match to protein family HMM PF05193 zinc metallopeptidase, M16 family	protease III	Code: O; COG: COG1025 protease III	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative TonB-dependent receptor protease/peptidase	Code: O; COG: COG1025 protease III	nardilysin (N-arginine dibasic convertase) [Source:HGNC Symbol;Acc:7995]	protease III precursor	transcript_id=ENSDNOT00000013940	
ECOLI02725	Exodeoxyribonuclease V gamma chain	Exodeoxyribonuclease V gamma chain	Exodeoxyribonuclease V gamma chain	Exodeoxyribonuclease V gamma chain	Exodeoxyribonuclease V, gamma subunit	Probable exodeoxyribonuclease V, gamma subunit RecC	Possible exodeoxyribonuclease V subunit C 125 kD polypeptide	Exodeoxyribonuclease V 125 kD polypeptide	RecC	Exodeoxyribonuclease V gamma chain	Exonuclease V gamma subunit	Exodeoxyribonuclease V, gamma chain	Exonuclease V subunit	Related to exodeoxyribonuclease V, gamma chain	putative exodeoxyribonuclease V	Exodeoxyribonuclease V gamma chain	Exodeoxyribonuclease V, 125 kDa subunit	Exodeoxyribonuclease V, gamma subunit	Exodeoxyribonuclease V gamma chain	Exodeoxyribonuclease V gamma chain	Exodeoxyribonuclease V, gamma subunit	Putative RecC protein	Exodeoxyribonuclease V, 125 kDa subunit	DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease	Putative exodeoxyribonuclease V gamma chain	Exodeoxyribonuclease V gamma chain	Exonuclease V gamma subunit	Exodeoxyribonuclease v gamma chain	Residues 1 to 1122 of 1122 are 99 pct identical to residues 1 to 1122 of a 1122 aa protein from Escherichia coli K12 ref: NP_417299.1 DNA helicase, ATP-dependent dsDNA-ssDNA exonuclease V subunit, ssDNA endonuclease	
ECOLI02726	Prepilin peptidase-dependent protein C	Prepilin peptidase dependent protein C	Prepilin peptidase dependent protein C	Residues 9 to 124 of 124 are 88 pct identical to residues 1 to 107 of a 107 aa protein from Escherichia coli K12 ref: NP_417300.1 prepilin peptidase dependent protein C	IPR001120: Prokaryotic N-terminal methylation site prepilin peptidase dependent protein C, putative component in type IV pilin biogenesis	similar to Salmonella typhi CT18 prepilin peptidase dependent protein C precursor prepilin peptidase dependent protein C precursor	Prepilin peptidase dependent protein C	Code: NU; COG: COG4967 prepilin peptidase dependent protein C	Code: NU; COG: COG4967 prepilin peptidase dependent protein C	Code: NU; COG: COG4967 prepilin peptidase dependent protein C	Prepilin peptidase dependent protein C	Prepilin peptidase dependent protein C	prepilin peptidase dependent protein C Code: NU; COG: COG4967	prepilin peptidase dependent protein C precursor	Prepilin peptidase dependent protein C precursor	Prepilin peptidase dependent protein C	Prepilin peptidase-dependent protein C	Putative prepilin peptidase dependent protein c	Predicted protein	Prepilin peptidase-dependent protein C	Prepilin peptidase dependent protein C	Prepilin peptidase-dependent protein C	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Prepilin peptidase-dependent protein C	Prepilin peptidase dependent protein C	Prepilin peptidase-dependent protein C	Prepilin peptidase-dependent protein C	
ECOLI02727	Uncharacterized protein ygdB	Hypothetical protein ygdB	Putative exported protein	Putative uncharacterized protein ygdB	Residues 1 to 135 of 135 are 96 pct identical to residues 1 to 135 of a 135 aa protein YGDB_ECOLI sp: P08370 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ygdB	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein ygdB	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02728	Prepilin peptidase-dependent protein B	Prepilin peptidase dependent protein B	Prepilin peptidase dependent protein B	Prepilin peptidase dependent protein B	Putative prepilin peptidase dependent protein	Prepilin peptidase dependent protein B	IPR001120: Prokaryotic N-terminal methylation site prepilin peptidase dependent protein B, putative component in type IV pilin biogenesis	similar to Salmonella typhi CT18 prepilin peptidase dependent protein B precursor prepilin peptidase dependent protein B precursor	Putative prepilin peptidase dependent protein	Prepilin peptidase dependent protein B	Code: U; COG: COG4795 prepilin peptidase dependent protein B	Code: U; COG: COG4795 prepilin peptidase dependent protein B	Prepilin peptidase dependent protein B	Putative prepilin peptidase dependent protein	Prepilin peptidase dependent protein B	Prepilin peptidase dependent protein	Putative prepilin peptidase dependent protein precursor	prepilin peptidase dependent protein B Code: U; COG: COG4795	Prepilin peptidase dependent protein	prepilin peptidase dependent protein B precursor	Putative uncharacterized protein	Prepilin peptidase dependent protein B	Putative uncharacterized protein	Prepilin peptidase dependent protein B	Putative prepilin peptidase dependent protein precursor	Conserved protein	Putative prepilin peptidase dependent protein	Prepilin peptidase dependent protein B	Prepilin peptidase dependent protein B precursor	
ECOLI02729	Prepilin peptidase-dependent protein A	Prepilin peptidase dependent protein A	Prepilin peptidase dependent protein a	Prepilin peptidase dependent protein A	similar to Escherichia coli K12 prepilin peptidase dependent protein A gi: 1789190 (157 aa). BLAST with identity of 99% in 156 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	Prepilin peptidase dependent protein A	IPR001120: Prokaryotic N-terminal methylation site prepilin peptidase dependent protein A, putative component in type IV pilin biogenesis	similar to Salmonella typhi CT18 prepilin peptidase dependent protein A precursor prepilin peptidase dependent protein A precursor	Hypothetical	Prepilin peptidase dependent protein A	Code: NU; COG: COG2165 prepilin peptidase dependent protein A	Code: NU; COG: COG2165 prepilin peptidase dependent protein A	Code: NU; COG: COG2165 prepilin peptidase dependent protein A	Prepilin peptidase dependent protein A	Hypothetical protein precursor	Prepilin peptidase dependent protein A	Hypothetical protein precursor	Putative exported protein precursor	Hypothetical protein precursor	prepilin peptidase dependent protein A precursor type II secretory pathway, pseudopilin	Prepilin peptidase dependent protein A, putative component in type IV pilin biogenesis	Prepilin peptidase dependent protein A	Putative uncharacterized protein	Prepilin peptidase-dependent protein A	Putative uncharacterized protein precursor	Conserved protein	Prepilin-type N-terminal cleavage/methylation domain protein	Prepilin peptidase-dependent protein A	Prepilin peptidase dependent protein A precursor	

ECOLI02730	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	highly similar to uniprot|P06785 Saccharomyces cerevisiae YOR074c CDC21 Thymidylate synthase;	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Thymidylate synthase	Putative thymidylate synthase	putative thymidylate synthetase (thyA)	Thymidylate synthase	Thymidylate synthase	identified by match to protein family HMM PF00303 thymidylate synthase	similar to GP:15157174; identified by sequence similarity; putative thymidylate synthase	
ECOLI02731	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase 1	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase	
ECOLI02732	Phosphoenolpyruvate-protein phosphotransferase ptsP	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase PtsP	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	hypothetical phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase ptsP	similar to GB:M64855, GB:S71057, GB:M64856, GB:M64857, GB:X67171, GB:X93620, SP:P01594, SP:P01596, SP:P01597, SP:P01598, SP:P01600, SP:P01602, SP:P01606, SP:P01607, SP:P01608, SP:P01609, SP:P01611, SP:P04431, SP:P04432, SP:P80362, PID:185964, PID:185966, PID:185968, PID:470556, PID:470562, PID:470576, PID:470592, PID:470596, PID:470598, PID:470600, PID:470618, PID:483882, PID:483884, PID:483886, PID:483902, PID:506423, PID:561705, PID:563650, PID:567134, PID:567136, PID:567138, PID:567146, PID:567148, PID:567150, PID:567154, PID:567158, PID:567172, PID:575258, PID:587324, PID:587326, PID:587328, PID:587330, PID:587332, PID:587334, PID:598171, PID:619427, PID:619601, PID:619602, PID:619603, PID:619615, PID:619616, PID:619624, PID:632988, PID:642240, PID:642378, PID:663000, PID:663001, PID:722540, PID:732738, PID:732746, PID:736242, PID:736244, PID:758085, PID:758589, PID:758599, PID:758601, PID:762937, PID:790811, PID:791024, PID:791036, PID:860994, PID:861002, PID:896278, PID:940528, PID:940529, PID:940532 phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase PtsP	Phosphoenolpyruvate-protein phosphotransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PHOSPHOENOLPYRUVATE PHOSPHOTRANSFERASE PTSP (ENZYME I-NTR) PROTEIN	PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE PTSP	Phosphoenolpyruvate-protein phosphotransferase	PTS system, enzyme I, transcriptional regulator	phosphoenolpyruvate-protein phosphotransferase, PtsP	Phosphoenolpyruvate-protein phosphotransferase	Nitrogen regulatory protein PTSI(NTR)	Phosphoenolpyruvate-protein phosphotransferase	Residues 1 to 748 of 748 are 99 pct identical to residues 1 to 748 of a 748 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289381.1 PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins)	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase PtsP	phosphoenolpyruvate-protein phosphotransferase PtsP	conserved gene phosphoenolpyruvate protein phosphotransferase PtsP	phosphoenolpyruvate-protein phosphotransferase PtsP	identified by similarity to SP:P37177; match to protein family HMM PF00391; match to protein family HMM PF01590; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417 phosphoenolpyruvate-protein phosphotransferase	Enzyme I of the phosphotransferase system	IPR000121: PEP-utilizing enzyme; IPR003018: GAF domain; IPR006318: Phosphoenolpyruvate-protein phosphotransferase;IPR008279: PEP-utilising enzyme, mobile region;IPR008731: PEP-utilising enzyme, N-terminal General PTS system, enzyme I, transcriptional regulator with NPR and NTR proteins	
ECOLI02733	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	Probable (di)nucleoside polyphosphate hydrolase	Invasion-associated protein A	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	putative MutT/nudix family protein	(Di)nucleoside polyphosphate hydrolase	similar to SP:Q9KK72; identified by sequence similarity; putative invasion protein A	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	Probable (di)nucleoside polyphosphate hydrolase	RNA pyrophosphohydrolase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE INVASION PROTEIN A (ADENOSINE 5'-TETRAPHOSPHO-5'-ADENOSINE PYROPHOSPHATASE)	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	RNA pyrophosphohydrolase	

ECOLI02735	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	putative DNA mismatch repair protein MutH	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	Residues 1 to 229 of 229 are 98 pct identical to residues 1 to 229 of a 229 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289384.1 methyl-directed mismatch repair	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	similar to DNA mismatch repair protein mutH hypothetical protein	conserved gene DNA mismatch repair protein MutH	similar to DNA mismatch repair protein mutH hypothetical protein	IPR004230: DNA mismatch repair enzyme MutH methyl-directed mismatch repair protein	similar to Salmonella typhi CT18 DNA mismatch repair protein DNA mismatch repair protein	DNA mismatch repair protein mutH	DNA mismatch repair protein MutH	Similar to: HI0403, MUTH_HAEIN DNA mismatch repair protein MutH	DNA mismatch repair protein MutH protein	DNA mismatch repair protein	DNA mismatch repair protein mutH	DNA mismatch repair protein mutH	identified by similarity to SP:P06722; match to protein family HMM PF02976; match to protein family HMM TIGR02248 DNA mismatch repair protein MutH	DNA mismatch repair protein	
ECOLI02736	UPF0053 inner membrane protein ygdQ	Membrane protein, TerC family	UPF0053 protein HI0056	Membrane protein, putative	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative TerC family integral membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	All3403 protein	Conserved hypothetical membrane protein	Putative membrane protein	Membrane protein, TerC family	Putative uncharacterized protein	UPF0053 inner membrane protein ygdQ	identified by match to PFAM protein family HMM PF04020 conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Putative membrane protein	PMID: 9278503 best DB hits: BLAST: swissprot:Q46931; YGDQ_ECOLI HYPOTHETICAL 26.2 KD PROTEIN IN; E=2e-31 gb:AAF12561.1; AE001826_30 (AE001826) conserved hypothetical; E=5e-31 swissprot:P43932; YGDQ_HAEIN HYPOTHETICAL PROTEIN HI0056 -----; E=7e-30 COG: ygdQ; COG0861 Membrane protein TerC, possibly involved in tellurium; E=2e-32 DRB0131; COG0861 Membrane protein TerC, possibly involved in; E=5e-32 conserved hypothetical protein-putative integral membrane protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Membrane protein, TerC family	Putative membrane protein	Conserved hypothetical integral membrane protein	hypothetical protein	INTEGRAL MEMBRANE PROTEIN	
ECOLI02737	Uncharacterized lipoprotein ygdR	Hypothetical lipoprotein ygdR precursor	Putative lipoprotein	Uncharacterized lipoprotein ygdR	Residues 1 to 72 of 72 are 100 pct identical to residues 1 to 72 of a 72 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289386.1 orf, conserved hypothetical protein	putative POT family, peptide transport protein	similar to Salmonella typhi CT18 possible lipoprotein possible lipoprotein	Putative POT family peptide transport protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative lipoprotein	Hypothetical lipoprotein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein ygdR	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Predicted protein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	
ECOLI02738	Protein tas	Oxidoreductase Tas, aldo/keto reductase family	Possible oxidoreductase	putative oxidoreductase Tas, aldo/keto reductase family	Tas protein	Oxidoreductase Tas, aldo/keto reductase family	Probable oxidoreductase	Probable oxidoreductase	Putative aldo/keto reductase-family protein	Probable oxidoreductase	Oxidoreductase Tas, aldo/keto reductase family	Putative uncharacterized protein	Predicted oxidoreductases of the aldo/keto reductase family	Oxidoreductase Tas, aldo/keto reductase family	Residues 1 to 346 of 346 are 100 pct identical to residues 1 to 346 of a 346 aa protein from Escherichia coli K12 ref: NP_417311.1 orf, conserved hypothetical protein	Putative aldo/keto reductase-family protein	Oxidoreductase protein	IPR001395: Aldo/keto reductase putative aldo/keto reductase	similar to Salmonella typhi CT18 possible oxidoreductase possible oxidoreductase	Putative aldo/keto reductase-family protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative oxidoreductase, aldo/keto reductase family	Tas protein	Putative aldo/keto reductase	Aldo/keto reductase	Code: C; COG: COG0667 conserved hypothetical protein	Code: C; COG: COG0667 conserved hypothetical protein	Aldo/keto reductase	aldo/keto reductase	Aldo/keto reductase	
ECOLI02739	Lysophospholipid transporter lplT	Lysophospholipid transporter lplT	Putative transporter	Macrolide-efflux protein	Putative uncharacterized protein	Putative efflux protein	Hypothetical protein ygeD	transporter, putative	Lysophospholipid transporter lplT	hypothetical protein	Lysophospholipid transporter lplT	Residues 1 to 396 of 396 are 98 pct identical to residues 1 to 397 of a 397 aa protein from Escherichia coli K12 ref: NP_417312.1 putative resistance proteins	Predicted Efflux Protein	Lysophospholipid transporter lplT	Lysophospholipid transporter lplT	putative efflux protein, resistance protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Similar to Chlamydia pneumoniae hypothetical protein Cp0009 SWALL:Q9K2F0 (EMBL:AE002164) (569 aa) fasta scores: E(): 2.3e-147, 67.42% id in 571 aa and to Chlamydia pneumoniae efflux protein YgeD or cpn0736 SWALL:Q9Z7G9 (EMBL:AE001655) (565 aa) fasta scores: E(): 7.3e-146, 67.19% id in 567 aa, and to Chlamydia trachomatis efflux protein YgeD or ct641 SWALL:O84647 (EMBL:AE001334) (559 aa) fasta scores: E(): 4.4e-130, 60.46% id in 564 aa putative membrane protein	Lysophospholipid transporter lplT	Putative membrane protein	Lysophospholipid transporter lplT	conserved hypothetical protein; possible transporter	Code: GEPR; COG: COG0477 putative resistance proteins	Code: GEPR; COG: COG0477 putative resistance proteins	major facilitator superfamily MFS_1	Code: GEPR; COG: COG0477 putative resistance proteins	Lysophospholipid transporter lplT	Putative membrane protein	major facilitator superfamily MFS_1	
ECOLI02740	Bifunctional protein aas	Acyltransferase family protein	similar to GB:J02933, GB:M13232, SP:P08709, PID:1000710, PID:180334,  and PID:182801; identified by sequence similarity; putative Aas bifunctional protein, putative	Aas bifunctional protein, putative	Bifunctional protein aas	Related to AAS bifunctional protein	2-acylglycerophosphoethanolamine acyl transferase/acyl carrier	AAS bifunctional protein	Aas bifunctional protein, putative	Bifunctional protein aas	PMID: 8300626 best DB hits: BLAST: pir:A81368; probable 2-acylglycerophosphoethanolamine acyltransferase; E=2e-89 swissprot:P31119; AAS_ECOLI AAS BIFUNCTIONAL PROTEIN [INCLUDES:; E=5e-59 gb:AAG57948.1; AE005512_7 (AE005512); E=6e-59 COG: Cj0938c_3; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=6e-66 aas_2; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=6e-50 VNG1339C; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=2e-28 PFAM: PF01553; Acyltransferase; E=7.6e-22 PF00501; AMP-binding enzyme; E=2.4e-07 2-acylglycerophosphoethanolamine acyltransferase and acyl-acyl carrier protein synthetase (AAS bifunctional protein)	Bifunctional protein aas	2-acylglycerophosphoethanolamine acyltransferase	Residues 1 to 719 of 719 are 99 pct identical to residues 1 to 719 of a 719 aa protein from Escherichia coli K12 ref: NP_417313.1 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase	Acylglycerophosphoethanolamine Acyltransferase	Bifunctional protein aas	Bifunctional protein aas	Similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase hypothetical protein	conserved gene 2-acylglycerophosphoethanolamine acyltransferase	Similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase hypothetical protein	bifunctional; IPR000873: AMP-dependent synthetase and ligase; IPR002123: Phospholipid/glycerol acyltransferase 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase	similar to Salmonella typhi CT18 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthetase 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthetase	Similar to the C-terminal region of Pirellula sp 2-acylglycerophosphoethanolamine acyltransferase and acyl-acyl carrier protein synthetase Aas or RB6533 SWALL:CAD74863 (EMBL:BX294144) (766 aa) fasta scores: E(): 3.5e-39, 30.59% id in 487 aa, and of Escherichia coli Aas bifunctional protein [includes: 2-acylglycerophosphoethanolamine acyltransferase (2-acyl-GPE acyltransferase); acyl-acyl carrier protein synthetase (acyl-ACP synthetase)] or B2836 SWALL:AAS_ECOLI (SWALL:P31119) (719 aa) fasta scores: E(): 3.2e-36, 28.54% id in 536 aa putative AMP-binding enzyme	Bifunctional protein aas	Similar to AAP18158 2-acyl-glycerophospho-ethanolamine acyltransferase,acyl-acyl-carrier protein synthetase from Shigella flexneri (719 aa). FASTA: opt: 735 Z-score: 862.5 E(): 3.8e-40 Smith-Waterman score: 826; 33.661identity in 508 aa overlap. n. b. No match between aa 1 and 196. Several domains missing compared to AAP18158 ORF ftt0694 conserved hypothetical protein	Bifunctional protein aas	Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II	identical to GB:AAF19437.1: fatty acyl CoA synthetase 1 {Trypanosoma brucei;}; go_component: membrane [goid 0016020]; go_function: fatty-acyl-CoA synthase activity [goid 0004321]; go_process: fatty acid metabolism [goid 0006631] fatty acyl CoA syntetase 1	AMP-dependent synthetase and ligase:Phospholipid/glycerol acyltransferase	
ECOLI02741	HTH-type transcriptional regulator galR	Galactose operon repressor	Galactose operon repressor	Repressor of galETK operon	Residues 1 to 343 of 343 are 99 pct identical to residues 1 to 343 of a 343 aa protein from Escherichia coli K12 ref: NP_417314.1 repressor of galETK operon	Galactose operon repressor	IPR000843: Bacterial regulatory protein LacI, HTH motif; IPR001761: Periplasmic binding protein/LacI transcriptional regulator transcriptional repressor of galETK operon (GalR/LacI family)	similar to Salmonella typhi CT18 galactose operon repressor galactose operon repressor	Galactose operon repressor	HTH-type transcriptional regulator galR	Code: K; COG: COG1609 repressor of galETK operon	Code: K; COG: COG1609 repressor of galETK operon	galactose operon repressor	Code: K; COG: COG1609 repressor of galETK operon	Galactose operon repressor	Galactose operon repressor	Galactose operon repressor	Galactose operon repressor	Galactose operon repressor	Galactose operon repressor	repressor of galETK operon Code: K; COG: COG1609	Galactose operon repressor	galactose operon repressor	Transcriptional regulator, LacI family	Repressor of galETK operon	Putative uncharacterized protein	Transcriptional regulator GalR	Transcriptional regulator, LacI family	DNA-binding transcriptional repressor	
ECOLI02742	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	ornithine decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	PMID: 6350601 best DB hits: BLAST: gb:AAK05382.1; AE006360_11 (AE006360) diaminopimelate; E=1e-106 swissprot:P31851; TABA_PSESZ TABA PROTEIN ----- pir: S27649; E=6e-92 swissprot:O27390; DCDA_METTH DIAMINOPIMELATE DECARBOXYLASE (DAP; E=7e-59 COG: MTH1335; COG0019 Diaminopimelate decarboxylase; E=7e-60 PFAM: PF02784; Pyridoxal-dependent decarboxy; E=3.1e-40 PF00278; Pyridoxal-dependent decarboxy; E=1.4e-29 diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	SC9B5.05, dcdA, diaminopimelate decarboxylase, len: 440 aa; similar to many e.g. SW:DCDA_ECOLI DcdA, diaminopimelate decarboxylase from Escherichia coli (420 aa) fasta scores; opt: 1769, z-score: 2033.9, E(): 0, (65.6% identity in 398 aa overlap). Contains PS00878 Orn ,DAP /Arg decarboxylases family 2 pyridoxal-P attachment site and PS00879 Orn /DAP /Arg decarboxylases family 2 signature 2. Also contains Pfam match to entry PF00278 Orn_DAP_Arg_deC, Pyridoxal-dependent decarboxylase. diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Residues 1 to 420 of 420 are 99 pct identical to residues 1 to 420 of a 420 aa protein from Escherichia coli K12 ref: NP_417315.1 diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase	diaminopimelate decarboxylase	Diaminopimelate decarboxylase	Diaminopimelate decarboxylase protein	Diaminopimelate decarboxylase	IPR000183: Orn/DAP/Arg decarboxylase 2; IPR002986: Diaminopimelate decarboxylase diaminopimelate decarboxylase	similar to Salmonella typhi CT18 diaminopimelate decarboxylase diaminopimelate decarboxylase	
ECOLI02744	Uncharacterized protein ygeA	Putative resistance protein	Aspartate racemase	226aa long hypothetical aspartate racemase	Asp/Glu racemase:Aspartate racemase	RacD-2 aspartate racemase	Putative aspartate racemase	Aspartate racemase	Putative uncharacterized protein	Putative amino acid recemase	Putative uncharacterized protein STY3159	Aspartate racemase family protein	Putative uncharacterized protein	Aspartate racemase	Aspartate racemase	Hypothetical protein ygeA	identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035 aspartate racemase family protein	Putative aspartate/glutamate racemase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ASPARTATE RACEMASE PROTEIN	Putative uncharacterized protein	Putative amino acid recemase	Putative resistance proteins	CDS_ID OB3391 amino acid racemase	aspartate racemase	Residues 1 to 230 of 230 are 99 pct identical to residues 1 to 230 of a 230 aa protein from Escherichia coli O157:H7 ref: NP_311724.1 putative resistance proteins	Putative aspartate/glutamate racemase	aspartate racemase	Asp/Glu/Hydantoin racemase family protein	identified by similarity to OMNI:NTL01PH00693; match to protein family HMM PF01177; match to protein family HMM TIGR00035 aspartate racemase, putative	
ECOLI02743	Transcriptional activator protein lysR	Transcriptional activator protein lysR	Transcriptional activator protein LysR	Transcriptional activator LysR	Positive regulator for lys	Residues 1 to 311 of 311 are 99 pct identical to residues 1 to 311 of a 311 aa protein from Escherichia coli K12 ref: NP_417316.1 positive regulator for lys	Transcriptional activator protein LysR	Transcriptional activator protein LysR	Transcriptional activator protein LysR	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain positive transcriptional regulator (LysR family)	similar to Salmonella typhi CT18 transcriptional activator protein LysR transcriptional activator protein LysR	Transcriptional activator protein LysR	Positive LysR family transcriptional regulator	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	regulatory protein, LysR:LysR, substrate-binding	Code: K; COG: COG0583 positive regulator for lys	Code: K; COG: COG0583 positive regulator for lys	transcriptional regulator, LysR family	Code: K; COG: COG0583 positive regulator for lys	Transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein, LysR: (1.7e-17) LysR, substrate-binding: (7.2e-38) KEGG: sil:SPO0241 transcriptional regulator, LysR family, ev=1e-110, 64% identity	Transcriptional activator protein LysR	Transcriptional activator protein LysR	Transcriptional activator protein LysR	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bur:Bcep18194_B0838 transcriptional regulator, LysR family	Transcriptional activator protein LysR	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bcn:Bcen_3484 transcriptional regulator, LysR family	Transcriptional activator protein LysR	transcriptional activator for lysine biosynthesis (LysR family) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator	
ECOLI02745	Arabinose-proton symporter	L-arabinose isomerase	Arabinose-proton symporter	Arabinose-proton symporter	Possible sugar-proton symporter	Residues 36 to 507 of 507 are 99 pct identical to residues 1 to 472 of a 472 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289394.1 low-affinity L-arabinose transport system proton symport protein	IPR003663: Sugar transporter; IPR005828: General substrate transporter; IPR005829: Sugar transporter superfamily;IPR007114: Major facilitator superfamily MFS family, L-arabinose: proton symport protein (low-affinity transporter)	similar to Salmonella typhi CT18 L-arabinose isomerase L-arabinose isomerase	L-arabinose: proton symport protein	Code: GEPR; COG: COG0477 low-affinity L-arabinose transport system proton symport protein	Code: GEPR; COG: COG0477 low-affinity L-arabinose transport system proton symport protein	Arabinose-proton symporter	low-affinity L-arabinose transport system proton symport protein Code: GEPR; COG: COG0477	arabinose transporter	Sugar transporter	Low-affinity L-arabinose transport system proton symport protein	Putative uncharacterized protein	Arabinose-proton symporter	YwtG	Arabinose transporter	Arabinose-proton symporter	Sugar transporter	Arabinose-proton symporter	Putative uncharacterized protein	Putative uncharacterized protein	Arabinose-proton symporter	L-arabinose isomerase	L-arabinose/proton symport protein	L-arabinose/proton symport protein	
ECOLI02746	2-deoxy-D-gluconate 3-dehydrogenase	2-keto-3-deoxygluconate oxidoreductase	putative 2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	2-keto-3-deoxygluconate oxidoreductase	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	Dehydrogenase	Residues 1 to 253 of 253 are 99 pct identical to residues 1 to 253 of a 253 aa protein from Escherichia coli O157:H7 ref: NP_311726.1 2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	IPR002198: Short-chain dehydrogenase/reductase SDR; IPR002347: Glucose/ribitol dehydrogenase; IPR003560: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 2-deoxy-D-gluconate 3-dehydrogenase	similar to Salmonella typhi CT18 2-keto-3-deoxygluconate oxidoreductase 2-keto-3-deoxygluconate oxidoreductase	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) FabG protein	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	Code: IQR; COG: COG1028 2-deoxy-D-gluconate 3-dehydrogenase	Code: IQR; COG: COG1028 2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase Code: IQR; COG: COG1028	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	2-deoxy-D-gluconate 3-dehydrogenase	
ECOLI02747	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	CDS_ID OB2813 5-keto-4-deoxyuronate isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	Residues 1 to 278 of 278 are 98 pct identical to residues 1 to 278 of a 278 aa protein from Escherichia coli K12 ref: NP_417320.1 homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	InterProMatches:IPR007045; Molecular Function: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity (GO:0008697), Biological Process: pectin catabolism (GO:0045490) 5-keto-4-deoxyuronate isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	IPR007045: 5-keto 4-deoxyuronate isomerase putative pectin degrading enzyme 5-keto 4-deoxyuronate isomerase	similar to Salmonella typhi CT18 5-keto-4-deoxyuronate isomerase 5-keto-4-deoxyuronate isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	Similar to Erwinia chrysanthemi 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI SWALL:KDUI_ERWCH (SWALL:Q05529) (278 aa) fasta scores: E(): 3.8e-54, 49.09% id in 277 aa, and to Bacteroides thetaiotaomicron 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase BT3231 SWALL:AAO78337 (EMBL:AE016939) (280 aa) fasta scores: E(): 2e-107, 91.42% id in 280 aa, and to Bacteroides thetaiotaomicron 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase BT4106 SWALL:AAO79211 (EMBL:AE016943) (306 aa) fasta scores: E(): 1e-63, 54.67% id in 289 aa, and to Yersinia pestis 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI or YPO1725 or Y1887 SWALL:Q8ZFH8 (EMBL:AJ414150) (278 aa) fasta scores: E(): 3.2e-56, 50.54% id in 277 aa putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase	5-keto-4-deoxyuronate isomerase	Code: G; COG: COG3717 pectin degrading enzyme 5-keto 4-deoxyuronate isomerase-like protein	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	Code: G; COG: COG3717 pectin degrading enzyme 5-keto 4-deoxyuronate isomerase-like protein	putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase similarity:fasta; SWALL:KDUI_ECOLI (SWALL:Q46938); Escherichia coli; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; kduI; length 278 aa; 278 aa overlap; query 3-278 aa; subject 1-278 aa similarity:fasta; SWALL:KDUI_BACHD (SWALL:Q9KAX0); Bacillus halodurans; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; kduI; length 276 aa; 276 aa overlap; query 3-278 aa; subject 1-276 aa	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	probable 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase protein Similar to SMb21349 [Sinorhizobium meliloti] Similar to swissprot:Q92V09 Putative location:bacterial cytoplasm Psort-Score: 0.3175; go_component: extrachromosomal DNA [goid 0046821]; go_function: isomerase activity [goid 0016853]; go_process: pectin catabolism [goid 0045490]	
ECOLI02748	Probable acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase; poly-beta- hydroxybutyrate biosynthesis	Probable acetyl-CoA acetyltransferase	Probable acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	Probable acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	Putative acyltransferase	beta-ketothiolase, (ACETOACETYL-COA THIOLASE)	Residues 1 to 394 of 394 are 98 pct identical to residues 1 to 394 of a 394 aa protein from Escherichia coli K12 ref: NP_417321.1 putative acyltransferase	Acetyl-CoA acetyltransferase	FadA4	Acetyl-CoA acetyltransferase (Beta-ketothiolase) protein	Probable acetyl-CoA acetyltransferase	Mb1358, fadA4, len: 389 aa. Equivalent to Rv1323, len: 389 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 389 aa overlap). Probable fadA4, acetyl-CoA acetyltransferase (EC 2.3.1.9), equivalent to THIL_MYCLE|P46707 possible acetyl-CoA C-acetyltransferase from Mycobacterium leprae (393 aa), FASTA scores: opt: 2218, E(): 0, (87.0% identity in 392 aa overlap). Also highly similar to others e.g. CAB70629.1|AL137242 probable acetoacetyl-coA thiolase from Streptomyces coelicolor (401 aa); T51772 acetyl-CoA C-acetyltransferase (EC 2.3.1.9) [validated] from Alcaligenes latus (392 aa); etc. Some homologies indicate ATA start codon. Contains PS00098 Thiolases acyl-enzyme intermediate signature, PS00737 Thiolases signature 2, and PS00099 Thiolases active site.  BELONGS TO THE THIOLASE FAMILY. PROBABLE ACETYL-COA ACETYLTRANSFERASE FADA4 (ACETOACETYL-COA THIOLASE)	IPR002155: Thiolase putative acetyl-CoA acetyltransferase	similar to Salmonella typhi CT18 probable acetyl-CoA acetyltransferase probable acetyl-CoA acetyltransferase	Beta-ketothiolase	Putative acetyl-CoA acetyltransferase	Acetyl-CoA acetyltransferase	identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 acetyl-CoA acetyltransferase	Thiolase	Code: I; COG: COG0183 putative acyltransferase	Code: I; COG: COG0183 putative acyltransferase	Acetyl-CoA C-acetyltransferase	Thiolase	Acetyl-CoA C-acetyltransferase	
ECOLI02749	Inner membrane transport protein yqeG	Inner membrane transport protein yqeG	Inner membrane transport protein yqeG	Residues 1 to 372 of 372 are 99 pct identical to residues 38 to 409 of a 409 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289398.1 putative transporter protein	IPR002091: Aromatic amino acid permease; IPR002422: Amino acid/polyamine transporter, family II putative transport protein	similar to Salmonella typhi CT18 probable amino acid transport protein probable amino acid transport protein	Putative transport protein	Code: E; COG: COG0814 putative transporter protein	Hypothetical transport protein YqeG	Putative transporter protein	putative transport protein	Spore germination protein	Putative transport protein	Putative uncharacterized protein	Serine transporter family protein	Predicted transporter	Serine transporter family protein	Serine transporter	Serine transporter family protein	Putative uncharacterized protein	Putative uncharacterized protein	Serine transporter family protein	Probable amino acid transport protein	Inner membrane transport protein YqeG	Inner membrane transport protein YqeG	Inner membrane transport protein YqeG	Probable amino acid transport protein	Serine transporter family protein	Inner membrane transport protein YqeG	
ECOLI02750	Uncharacterized protein yqeH	Putative uncharacterized protein yqeH	IPR000792: Bacterial regulatory protein, LuxR family putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	Code: K; COG: COG2771 conserved hypothetical protein	Putative uncharacterized protein	Conserved protein with bipartite regulator domain	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	RmbA	RmbA	RmbA	Putative uncharacterized protein rmbA	RmbA	Putative uncharacterized protein	RmbA	Putative uncharacterized protein rmbA	Putative uncharacterized protein	Putative uncharacterized protein yqeH	Putative uncharacterized protein yqeH	Putative uncharacterized protein yqeH	Putative uncharacterized protein yqeH	Putative uncharacterized protein rmbA	YqeH protein	
ECOLI02751	Uncharacterized protein yqeI	Transcriptional regulatory protein, C terminal domain	putative transcriptional regulatory protein	similar to Salmonella typhimurium putative transcriptional regulatory protein putative transcriptional regulatory protein	Putative transcriptional regulatory protein	Putative sensory transducer	Transcriptional regulatory protein, C terminal	Transcriptional regulator, CadC	Predicted transcriptional regulator	Transcriptional regulatory protein, C terminal	Transcriptional regulator, CadC precursor	Putative uncharacterized protein	Putative transcriptional regulatory protein	Transcriptional regulatory protein, C	Transcriptional regulatory protein, C	Transcriptional regulatory protein, C	Putative transcriptional regulator	Transcriptional regulatory protein	Transcriptional regulatory protein, C	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulatory protein	Predicted transcriptional regulator	Predicted transcriptional regulator	predicted transcriptional regulator	
ECOLI02752	Uncharacterized protein yqeJ	Putative uncharacterized protein yqeJ	putative inner membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative inner membrane protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative exported protein	Putative inner membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative exported protein	Putative inner membrane protein	Putative uncharacterized protein	O94	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein yqeJ	Putative uncharacterized protein yqeJ	Putative uncharacterized protein yqeJ	Putative uncharacterized protein yqeJ	Putative uncharacterized protein fidL	Predicted protein	Predicted protein	
ECOLI02753	Uncharacterized protein yqeK	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yqeK	pseudo	Putative uncharacterized protein yqeK	Putative uncharacterized protein yqeK	Predicted protein	Predicted protein	pseudo conserved predicted protein, C-terminal part	
ECOLI02754	Putative uncharacterized protein ygeF	conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ygeF	Putative uncharacterized protein ygeF	Putative uncharacterized protein ygeF	Putative uncharacterized protein ygeF	Predicted protein	conserved predicted protein	
ECOLI02755	Uncharacterized protein ygeG	Putative uncharacterized protein ygeG	IpgC, cytoplasmic chaperone for IpaB and IpaC	Code: R; COG: COG0457 conserved hypothetical protein	putative type III secretion chaperone	cytoplasmic chaperone for IpaB and IpaC IpgC	type III secretion low calcium response chaperone LcrH/SycD identified by match to protein family HMM PF07720; match to protein family HMM TIGR02552	type III secretion chaperone BicA identified by match to protein family HMM PF07720; match to protein family HMM TIGR02552	Putative type III secretion apparatus protein	Tetratricopeptide repeat protein	Type III secretion, low calcium response chaperone LcrH/SycD	Predicted chaperone	Tetratricopeptide repeat protein	Tetratricopeptide TPR_3	Chaperone protein IpgC	Chaperone protein	Tetratricopeptide repeat protein	Putative uncharacterized protein	Putative chaperone	Putative chaperone	Putative chaperone	Putative chaperone	Type III secretion chaperone	Predicted chaperone	Predicted chaperone	predicted chaperone	
ECOLI02756	Uncharacterized protein ygeH	putative adenylate cyclase Codons 130 to the C-terminus are similar to codons 198 to the C-terminus of Rhizobium meliloti (Sinorhizobium meliloti) cya3 putative adenylate cyclase 3 (ec 4.6.1.1) (atp pyrophosphate-lyase 3) (adenylyl cyclase 3).  UniProt:CYA3_RHIME (EMBL:AE007273) (587 aa), and to entire protein of Rhizobium loti (Mesorhizobium loti) adenylate cyclase. UniProt:Q98JB4 (541 aa) similarity:fasta; with=UniProt:CYA3_RHIME (EMBL:AE007273); Rhizobium meliloti (Sinorhizobium meliloti).; cya3; Putative adenylate cyclase 3 (EC 4.6.1.1) (ATP pyrophosphate-lyase 3) (Adenylyl cyclase 3).; length=587; id 35.533; 394 aa overlap; query 130-520; subject 197-585 similarity:fasta; with=UniProt:Q98JB4; Rhizobium loti (Mesorhizobium loti).; Adenylate cyclase.; length=541; id 39.053; 507 aa overlap; query 34-521; subject 35-540	putative transcriptional regulator Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	Transcriptional regulatory protein, C terminal	Predictedtranscriptional regulator	Transcriptional regulatory protein, C terminal	Transcriptional regulator, CadC	Transcriptional regulatory protein	Putative uncharacterized protein	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Predictedtranscriptional regulator	Predictedtranscriptional regulator	predicted transcriptional regulator	
ECOLI02757	Uncharacterized protein ygeI	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ygeI	Putative uncharacterized protein ygeI	Putative uncharacterized protein ygeI	Putative uncharacterized protein ygeI	Predicted protein	Predicted protein	conserved predicted protein	
ECOLI02758	Putative peptidoglycan-binding-like protein	Putative PilT protein	Putative membrane protein	Putative exported protein	Putative Type IV pilus protein	PilT protein	IpgF protein, putative	Peptidoglycan-binding-like protein	putative soluble lytic murein transglycosylase PilT	Lytic transglycosylase	Lytic transglycosylase, catalytic precursor	HpaH precursor identified by match to protein family HMM PF01464	Lytic transglycosylase, catalytic	soluble lytic murein transglycosylase	Putative exported protein	Lytic transglycosylase, catalytic PFAM: Lytic transglycosylase, catalytic KEGG: gsu:GSU2121 transglycosylase SLT domain protein	BapC protein identified by match to protein family HMM PF01464	Possible type III secretion system effector protein	Invasion protein	putative transglycosylase Pfam entry PF01464; similar to Ralstonia metallidurans gi:22980939	Putative invasion protein	Putative ipgF protein	Putative invasion protein	pseudo	Lytic transglycosylase catalytic	Putative ipgF protein	Putative uncharacterized protein	Lytic transglycosylase catalytic precursor	Lytic transglycosylase catalytic precursor	
ECOLI02758	Putative peptidoglycan-binding-like protein	Putative PilT protein	Putative membrane protein	Putative exported protein	Putative Type IV pilus protein	PilT protein	IpgF protein, putative	Peptidoglycan-binding-like protein	putative soluble lytic murein transglycosylase PilT	Lytic transglycosylase	Lytic transglycosylase, catalytic precursor	HpaH precursor identified by match to protein family HMM PF01464	Lytic transglycosylase, catalytic	soluble lytic murein transglycosylase	Putative exported protein	Lytic transglycosylase, catalytic PFAM: Lytic transglycosylase, catalytic KEGG: gsu:GSU2121 transglycosylase SLT domain protein	BapC protein identified by match to protein family HMM PF01464	Possible type III secretion system effector protein	Invasion protein	putative transglycosylase Pfam entry PF01464; similar to Ralstonia metallidurans gi:22980939	Putative invasion protein	Putative ipgF protein	Putative invasion protein	pseudo	Lytic transglycosylase catalytic	Putative ipgF protein	Putative uncharacterized protein	Lytic transglycosylase catalytic precursor	Lytic transglycosylase catalytic precursor	
ECOLI02759	Putative uncharacterized response regulatory protein ygeK	identified by match to protein family HMM PF00072; match to protein family HMM PF00196 DNA-binding response regulator, LuxR family	Uncharacterized response regulatory protein ygeK	Probable two-component response regulator, LuxR family	Transcriptional regulator	putative two-component response regulator, LuxR family	two component transcriptional regulator, LuxR family PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2 KEGG: aba:Acid345_4064 two component transcriptional regulator, LuxR family	two-component response regulator	response regulator	Two component transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LuxR family	Two component transcriptional regulator, LuxR family	two component transcriptional regulator, LuxR family PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2 KEGG: rrs:RoseRS_0691 two component transcriptional regulator, LuxR family	Response regulator receiver, LuxR domain	Two component transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	DNA-binding response regulator, LuxR family	pseudo	Putative regulator in two-component regulatory system with BarA	Putative 2-component transcriptional regulator	Putative uncharacterized protein	Two component transcriptional regulator, LuxR family	Transcriptional regulator/response regulator, LuxR	pseudo two component transcriptional regulator, N-terminal truncated	
ECOLI02759	Putative uncharacterized response regulatory protein ygeK	identified by match to protein family HMM PF00072; match to protein family HMM PF00196 DNA-binding response regulator, LuxR family	Uncharacterized response regulatory protein ygeK	Probable two-component response regulator, LuxR family	Transcriptional regulator	putative two-component response regulator, LuxR family	two component transcriptional regulator, LuxR family PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2 KEGG: aba:Acid345_4064 two component transcriptional regulator, LuxR family	two-component response regulator	response regulator	Two component transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LuxR family	Two component transcriptional regulator, LuxR family	two component transcriptional regulator, LuxR family PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2 KEGG: rrs:RoseRS_0691 two component transcriptional regulator, LuxR family	Response regulator receiver, LuxR domain	Two component transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	DNA-binding response regulator, LuxR family	pseudo	Putative regulator in two-component regulatory system with BarA	Putative 2-component transcriptional regulator	Putative uncharacterized protein	Two component transcriptional regulator, LuxR family	Transcriptional regulator/response regulator, LuxR	pseudo two component transcriptional regulator, N-terminal truncated	

ECOLI02761	Putative uncharacterized protein ygeO	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	
ECOLI01533	pseudo	Code: L; COG: COG2801 IS2 ORF2	

ECOLI02763	Putative uncharacterized protein ygeQ	Residues 1 to 192 of 197 are 96 pct identical to residues 1 to 192 of a 201 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289434.1 orf, conserved hypothetical protein	conserved hypothetical protein	pseudo	YgeQ protein	Putative uncharacterized protein	
ECOLI02764	Uncharacterized lipoprotein ygeR	Lipoprotein	Lipoprotein nlpD/lppB homolog	Putative uncharacterized protein	Peptidase, M23/M37 family protein	Possible lipoprotein	Hypothetical lipoprotein ygeR	Putative peptidase	Putative peptidase	Lipoprotein NlpD, putative	Putative peptidase	Putative lipoprotein	Cell wall hydrolase	Residues 1 to 259 of 259 are 99 pct identical to residues 1 to 259 of a 259 aa protein from Escherichia coli O157:H7 ref: NP_311765.1 putative lipoprotein	novel lipoprotein homolog NlpD	conserved gene lipoprotein NlpD	novel lipoprotein homolog NlpD	Probable lipoprotein	Lipoprotein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark lipoprotein	IPR002482: Peptidoglycan-binding LysM; IPR002886: Peptidase M23/M37 putative metalloendopeptidase	similar to Salmonella typhi CT18 possible lipoprotein possible lipoprotein	Lipoprotein	Evidence 2b : Function of strongly homologous gene; Product type m : membrane component lipoprotein precursor	Lipoprotein NlpD	Putative metalloendopeptidase	lipoprotein	identified by match to protein family HMM PF01476; match to protein family HMM PF01551 lipoprotein	identified by match to protein family HMM PF01476; match to protein family HMM PF01551 peptidase M23/LysM domain protein	
ECOLI02765	Xanthine dehydrogenase molybdenum-binding subunit	possible hypoxanthine oxidase XdhD	Xanthine dehydrogenase molybdenum-binding subunit	Residues 14 to 765 of 765 are 99 pct identical to residues 1 to 752 of a 752 aa protein from Escherichia coli K12 ref: NP_417342.1 orf, conserved hypothetical protein	xanthine dehydrogenase aldehyde oxidase	Code: C; COG: COG1529 conserved hypothetical protein	Code: C; COG: COG1529 conserved hypothetical protein	Xanthine dehydrogenase, molybdenum binding subunit	Xanthine dehydrogenase, molybdenum binding subunit	xanthine dehydrogenase, molybdenum binding subunit identified by match to protein family HMM PF01315; match to protein family HMM PF02738	aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding KEGG: nfa:nfa52390 putative oxidoreductase	Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding	putative molybdenum-binding subunit of oxidoreductase	Putative xanthine dehydrogenase family protein; putative hypoxanthine oxidase	conserved hypothetical protein Code: C; COG: COG1529	Putative xanthine dehydrogenase family protein	xanthine dehydrogenase, molybdenum binding subunit aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain	Aldehyde oxidase and xanthine dehydrogenase domains protein	Putative dehydrogenase	Xanthine dehydrogenase, molybdenum binding subunit	Xanthine dehydrogenase, molybdenum-binding subunit	Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding	Putative oxidoreductase	Xanthine dehydrogenase family protein, molybdopterin-binding subunit	Xanthine dehydrogenase, molybdenum binding subunit	Xanthine dehydrogenase family protein, molybdopterin-binding subunit	Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding	Xanthine dehydrogenase	Xanthine dehydrogenase	
ECOLI02766	Xanthine dehydrogenase FAD-binding subunit	hypothetical dehydrogenase	Xanthine dehydrogenase, FAD binding subunit	Xanthine dehydrogenase FAD-binding subunit	Monoxide Dehydrogenase	BH0747 protein	SC6C5.06, probable oxidoreductase subunit, len: 296aa; similar to many, both prokaryotic and eukaryotic egs. TR:Q59127 (EMBL:X75338) nicotine dehydrogenase from Arthrobacter nicotinovorans (283 aa) fasta scores; opt: 308, z-score: 490.8, E(): 4.8e-20, (29.9% identity in 281 aa overlap) and SW:XDH_DROPS xanthine dehydrogenase from Drosophila pseudoobscura (1342 aa) fasta scores; opt: 146, z-score: 404.4, E(): 3.1e-15, (31.3% identity in 240 aa overlap). Contains Pfam match to entry PF00941 dehydrog_molyb, Molybdopterin binding domain in dehydrogenase, score 41.00, E-value 1.2e-12. putative oxidoreductase subunit	Residues 1 to 292 of 292 are 99 pct identical to residues 1 to 292 of a 292 aa protein from Escherichia coli K12 ref: NP_417343.1 putative dehydrogenase	identified by match to protein family HMM PF00941 xanthine dehydrogenase family protein, medium subunit	Medium FAD-binding subunit of molybdenum enzyme	Molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein, C-terminal	Code: C; COG: COG1319 putative dehydrogenase	identified by similarity to SP:P19920; match to protein family HMM PF00941; match to protein family HMM PF03450 carbon monoxide dehydrogenase, medium subunit	Code: C; COG: COG1319 putative dehydrogenase	Molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein-like	molybdopterin dehydrogenase, FAD-binding	Xanthine dehydrogenase, FAD binding subunit	molybdopterin dehydrogenase, FAD-binding protein PFAM: molybdopterin dehydrogenase, FAD-binding KEGG: sma:SAV2069 putative dehydrogenase	Xanthine dehydrogenase, FAD binding subunit	molybdopterin dehydrogenase, FAD-binding PFAM: molybdopterin dehydrogenase, FAD-binding KEGG: mag:amb1484 aerobic-type carbon monoxide dehydrogenase	Molybdopterin dehydrogenase, FAD-binding	dehydrogenase, putative	xanthine dehydrogenase, FAD binding subunit identified by match to protein family HMM PF00941; match to protein family HMM PF03450	molybdopterin dehydrogenase, FAD-binding protein PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein KEGG: eba:ebA2062 medium FAD-binding subunit of molybdenum enzyme	Molybdopterin dehydrogenase, FAD-binding	Xanthine dehydrogenase	putative dehydrogenase Code: C; COG: COG1319	molybdopterin dehydrogenase with FAD binding domain	putative carbon monoxide dehydrogenase ; putative signal peptide Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	
ECOLI02767	Xanthine dehydrogenase iron-sulfur-binding subunit	Putative oxidoreductase	Probable aldehyde oxidoreductase	hypothetical CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs	Xanthine dehydrogenase iron-sulfur binding subunit	Probable 2Fe-2S ferredoxin	Probable 2Fe-2S ferredoxin	Product confidence : putative Gene name confidence : hypothetical putative oxidoreductase protein	Probable 2Fe-2S ferredoxin	Xanthine dehydrogenase iron-sulfur-binding subunit	SC6C5.07, probable iron-sulphur binding oxidoreductase subunit, len: 196aa; similar to many eg.  TR:P95635 (EMBL:U65440) 4-hydroxybenzoyl-CoA reductase from Rhodopseudomonas palustris (163 aa) fasta scores; opt: 288, z-score: 720.8, E(): 7.4e-33, (42.2% identity in 187 aa overlap) and TR:P72223 (EMBL:X98131) quinoline 2-oxidoreductase from Pseudomonas putida (168 aa) fasta scores; opt: 264, z-score: 703.7, E(): 6.6e-32, (40.4% identity in 198 aa overlap). Contains PS00197 2Fe-2S ferredoxins, iron-sulfur binding region signature. putative oxidoreductase	Residues 1 to 159 of 159 are 98 pct identical to residues 1 to 159 of a 159 aa protein from Escherichia coli K12 ref: NP_417344.1 putative dehydrogenase	Ferredoxin:(2Fe-2S)-binding	Code: C; COG: COG2080 putative dehydrogenase	identified by similarity to SP:P19915; match to protein family HMM PF00111; match to protein family HMM PF01799 2Fe-2S iron-sulfur cluster binding domain	Code: C; COG: COG2080 putative dehydrogenase	Ferredoxin:(2Fe-2S)-binding protein	(2Fe-2S)-binding	putative iron-sulphur cluster carbon monooxide dehydrogenase subunit similarity:fasta; SWALL:Q52589 (EMBL:X77931); Pseudomonas thermocarboxydovorans; Cut C protein; length 163 aa; 156 aa overlap; query 1-155 aa; subject 1-156 aa similarity:fasta; SWALL:Q92X31 (EMBL:AL603642); Rhizobium meliloti; putative oxidoreductase protein; rb0131 or smb20131; length 161 aa; 156 aa overlap; query 1-155 aa; subject 1-156 aa	Xanthine dehydrogenase iron-sulfur binding subunit	(2Fe-2S)-binding protein PFAM: ferredoxin [2Fe-2S]-binding KEGG: mlo:mll2289 carbon-monoxide dehydrogenase small chain	(2Fe-2S)-binding	Xanthine dehydrogenase iron-sulfur binding subunit	(2Fe-2S)-binding domain protein PFAM: ferredoxin; [2Fe-2S]-binding domain protein KEGG: ppu:PP4233 oxidoreductase, small subunit, putative	(2Fe-2S)-binding domain protein	carbon monoxide dehydrogenase small chain identified by match to protein family HMM PF00111; match to protein family HMM PF01799	(2Fe-2S)-binding domain protein PFAM: ferredoxin; [2Fe-2S]-binding domain protein KEGG: rpd:RPD_1525 (2Fe-2S)-binding	(2Fe-2S)-binding domain protein PFAM: ferredoxin; [2Fe-2S]-binding domain protein KEGG: mta:Moth_1961 (2Fe-2S)-binding	(2Fe-2S)-binding	
ECOLI02768	Uncharacterized sigma-54-dependent transcriptional regulator ygeV	Related to transcriptional regulator	putative transcriptional regulator	Hypothetical sigma-54-dependent transcriptional regulator ygeV	Signal-transduction and transcriptional-control protein	Putative transcriptional regulator	Putative acetoin catabolism regulatory transcription regulator protein	Evidence 1 : Function experimentally demonstrated in the studied organism; PubMedId : 10419955, 10715011, 11114944; Product type r : regulator sigma(54)-dependent transcriptionnal regulator for areCBA operon	identified by similarity to SP:P28614; match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM TIGR01199 sigma-54 dependent transcriptional regulator	Code: KT; COG: COG3829 putative transcriptional regulator	Sigma-54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains	Hypothetical sigma-54-dependent transcriptional regulator YgeV	hypothetical protein similarity to COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains(Evalue: 1E-102)	Hypothetical sigma-54-dependent transcriptional regulator ygeV	putative transcriptional regulator, Fis family	hypothetical sigma-54-dependent transcriptional regulator YgeV identified by match to protein family HMM PF00158; match to protein family HMM PF02954	sigma54 specific transcriptional regulator with PAS sensor, Fis family	probable transcriptional regulator	putative sigma-54 dependent transcriptional regulator Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	DNA-binding transcriptional regulator putative regulatory protein	Sigma54 specific transcriptional regulator, Fis family	PAS modulated sigma54 specific transcriptional regulator, Fis family	GAF modulated sigma54 specific transcriptional regulator, Fis family	Signal-transduction and transcriptional-control protein	Sigma-54 dependent transcriptional regulator, Fis family	Probable transcriptional regulator	Sigma-54 dependent transcriptional regulator	GAF modulated sigma54 specific transcriptional regulator, Fis family PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5 SMART: AAA ATPase KEGG: pen:PSEEN0635 sigma-54 dependent transcriptional regulator	Putative sigma54 specific transcriptional regulator	
ECOLI02769	Uncharacterized protein ygeW	Putative carbamoyl transferase	Hypothetical protein ygeW	Uncharacterized protein ygeW	Code: E; COG: COG0078 putative carbamoyl transferase	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain family identified by match to protein family HMM PF00185; match to protein family HMM PF02729	Putative uncharacterized protein	Putative uncharacterized protein ygeW	Ornithine carbamoyltransferase	aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain family identified by match to protein family HMM PF00185; match to protein family HMM PF02729	ornithine carbamoyltransferase identified by similarity to SP:P18186; match to protein family HMM PF00185; match to protein family HMM PF02729	ornithine carbamoyltransferase	conserved hypothetical protein aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain	Putative aspartate/ornithine carbamoyltransferase	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain	Aspartate/ornithine carbamoyltransferase family protein	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain	Aspartate/ornithine carbamoyltransferase family protein	Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain	Conserved protein	Aspartate/ornithine carbamoyltransferase family protein	Aspartate/ornithine carbamoyltransferase family protein	Carbamoyltransferase YgeW	Aspartate/ornithine carbamoyltransferase family protein	Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain	Aspartate/ornithine carbamoyltransferase family protein	Aspartate/ornithine carbamoyltransferase family protein	Ornithine carbamoyltransferase	
ECOLI02770	Putative diaminopropionate ammonia-lyase	Diaminopropionate ammonia-lyase, putative	Related to threonine deaminase	putative threonine dehydratase	Putative diaminopropionate ammonia-lyase	Putative diaminopropionate ammonia-lyase	Threonine dehydratase biosynthetic	Putative diaminopropionate ammonia-lyase	Putative diaminopropionate ammonia-lyase	hypothetical protein	identified by similarity to SP:P40817; match to protein family HMM PF00291; match to protein family HMM TIGR01747 diaminopropionate ammonia-lyase	IPR001926: Pyridoxal-5'-phosphate-dependent enzyme, beta family putatiave diaminopropionate ammonia lyase	similar to Salmonella typhimurium putatiave diaminopropionate ammonia lyase putatiave diaminopropionate ammonia lyase	Diaminopropionate ammonia-lyase	diaminopropionate ammonia-lyase, putative	identified by similarity to SP:P40817; match to protein family HMM PF00291; match to protein family HMM TIGR01747 diaminopropionate ammonia-lyase	Pyridoxal-phosphate dependent enzyme	Diaminopropionate ammonia-lyase	Code: E; COG: COG1171 putative dehydratase	Code: E; COG: COG1171 putative dehydratase	Pyridoxal-5'-phosphate-dependent enzyme, beta subunit	Diaminopropionate ammonia-lyase	Diaminopropionate ammonia-lyase	Pyridoxal-5'-phosphate-dependent enzyme, beta subunit PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit: (3.4e-26) KEGG: jan:Jann_1828 pyridoxal-5'-phosphate-dependent enzyme, beta subunit, ev=1e-97, 57% identity	Putative diaminopropionate ammonia-lyase	Pyridoxal-5'-phosphate-dependent enzyme, beta subunit PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit KEGG: mlo:mlr7936 diaminopropionate ammonia-lyase	hypothetical protein similarity to COG1171 Threonine dehydratase(Evalue: 1E-100)	Putative dehydratase	Diaminopropionate ammonia-lyase	
ECOLI02771	Uncharacterized protein ygeY	Peptidase, M20/M25/M40 family	Putative acetylornitine deacetylase	Related to acetylornithine deacetylase	Acetylornithine deacetylase	putative deacetylase	Hypothetical protein ygeY	acetylornithine deacetylase	identified by match to protein family HMM PF01546; match to protein family HMM TIGR01910 acetylornitine deacetylase, putative	Succinyl-diaminopimelate desuccinylase	Uncharacterized protein ygeY	ArgE/DapE-related deacylase	acetylornithine deacetylase	Code: E; COG: COG0624 putative deacetylase	Code: E; COG: COG0624 putative deacetylase	peptidase M20	Putative uncharacterized protein	acetylornithine deacetylase	Putative deacetylase	acetylornithine deacetylase, putative identified by match to protein family HMM PF01546; match to protein family HMM PF07687	Acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase	acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase PFAM: peptidase M20; peptidase dimerisation domain protein KEGG: rsp:RSP_1758 probable succinyl-diaminopimelate desuccinylase	peptidase, M20/M25/M40 family identified by match to protein family HMM PF01546; match to protein family HMM PF07687	succinyl-diaminopimelate desuccinylase TIGRFAM: succinyl-diaminopimelate desuccinylase PFAM: peptidase M20; peptidase dimerisation domain protein KEGG: tfu:Tfu_0495 succinyl-diaminopimelate desuccinylase	conserved hypothetical protein	Acetylornithine deacetylase	acetylornithine deacetylase	Putative peptidase	Peptidase dimerisation domain protein	
ECOLI02772	D-phenylhydantoinase	Putative dihydropyrimidinase	hypothetical D-hydantoinase	D-hydantoinase	D-hydantoinase/dihydropyrimidinase	Dihydropyrimidinase	hypothetical hydrolase ygeZ	Hypothetical hydrolase ygeZ	similar to SP:Q45515; identified by sequence similarity; putative D-hydantoinase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE D-HYDANTOINASE (DIHYDROPYRIMIDINASE) PROTEIN	D-hydantoinase	dihydropyrimidinase (D-hydantoinase)	D-HYDANTOINASE	D-phenylhydantoinase	dihydropyrimidinase	SC1A6.04, probable dihydropyrimidinase, len: 467 aa; similar to many e.g.TR:Q45515 (EMBL:S73773) hydantoinase from Bacillus stearothermophilus (471 aa), fasta scores; opt: 1585 z-score: 1511.4 E(): 0, 50.9% identity in 458 aa overlap and to SW:HYDA_PSEPU (EMBL:U84197) Pseudomonas putida D-hydantoinase (EC 3.5.2.2) Dht, 495 aa; fasta scores: opt: 1213 Z-score: 1348.8; 41.722% identity in 453 aa overlap putative D-hydantoinase	identified by match to protein family HMM PF01979; match to protein family HMM TIGR02033 D-hydantoinase	Dihydropyrimidinase	D-hydantoinase	identified by similarity to SP:Q59699; match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033 D-hydantoinase	Dihydroorotase	identified by similarity to SP:Q59699; match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033 dihydropyrimidinase	pseudo Amidohydrolase	COG0044: Dihydroorotase and related cyclic amidohydrolases (PyrC). putative D-hydantoinase (dihydropyrimidinase)	Code: F; COG: COG0044 conserved hypothetical protein	D-hydantoinase	D-hydantoinase	
ECOLI02773	Carbamate kinase-like protein yqeA	Carbamate kinase	Carbamate kinase-like protein	Carbamate kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase-like protein yqeA	Carbamate kinase	Carbamate kinase	Putative kinase	Carbamate kinase	Carbamate kinase	Carbamate kinase 1	identified by similarity to SP:P35836; match to protein family HMM PF00696; match to protein family HMM TIGR00746 carbamate kinase	InterProMatches:IPR003964; Biological Process: arginine metabolism (GO:0006525), Molecular Function: carbamate kinase activity (GO:0008804) carbamate kinase	Putative uncharacterized protein gbs2084	hypothetical protein, similar to carbamate kinase	identified by match to PFAM protein family HMM PF00696 carbamate kinase	Ortholog of S. aureus MRSA252 (BX571856) SAR1143 putative carbamate kinase	hypothetical protein, similar to carbamate kinase	Carbamate kinase-like carbamoyl phosphate synthetase	carbamate kinase homolog	Similar to Enterococcus faecium (Streptococcus faecium) carbamate kinase ArcC SW:ARCC_ENTFC (P35836) (309 aa) fasta scores: E(): 2e-49, 48.562% id in 313 aa, and to Escherichia coli carbamate kinase-like protein YqeA SW:ARCL_ECOLI (Q46807) (310 aa) fasta scores: E(): 1.3e-57, 54.397% id in 307 aa putative carbamate kinase	identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746 carbamate kinase	Code: E; COG: COG0549 putative kinase	identified by similarity to SP:P35836; match to protein family HMM PF00696; match to protein family HMM TIGR00746 carbamate kinase	Code: E; COG: COG0549 putative kinase	
ECOLI02774	Uncharacterized protein yqeB	Hypothetical protein yqeB	unknown	Putative synthases	Code: O; COG: COG1975 putative synthases	Code: O; COG: COG1975 putative synthases	Putative uncharacterized protein	Putative uncharacterized protein yqeB	xanthine dehydrogenase accessory factor, putative subfamily, putative identified by match to protein family HMM PF02625	putative synthase	Putative xanthine dehydrogenase accessory factor	Putative uncharacterized protein	Conserved protein with NAD(P)-binding Rossman fold	Putative xanthine dehydrogenase accessory factor	Selenium-dependent molybdenum hydroxylase system protein, YqeB family	Putative xanthine dehydrogenase accessory factor	Putative xanthine dehydrogenase accessory factor	Putative uncharacterized protein	Putative uncharacterized protein yqeB	Putative uncharacterized protein yqeB	Putative uncharacterized protein yqeB	Putative uncharacterized protein yqeB	Putative uncharacterized protein yqeB	Conserved protein with NAD(P)-binding Rossman fold	Putative uncharacterized protein yqeB	YqeB protein	Conserved protein with NAD(P)-binding Rossman fold	Putative uncharacterized protein	Conserved protein with NAD(P)-binding Rossman fold	
ECOLI02775	Uncharacterized protein yqeC	Putative uncharacterized protein	Conserved hypothetical protein	Hypothetical protein yqeC	Putative uncharacterized protein	anaerobic dehydrogenase cluster protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	uncharacterized MobA-related protein-like protein KEGG: mta:Moth_2003 uncharacterized MobA-related protein-like	hypothetical protein	Putative uncharacterized protein yqeC	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02776	Uncharacterized protein ygfJ	hypotehtical ygfJ	Hypothetical protein ygfJ	Molybdopterin-guanine dinucleotide biosynthesis protein A	Putative uncharacterized protein ygfJ	Code: R; COG: COG2068 conserved hypothetical protein	Code: R; COG: COG2068 conserved hypothetical protein	conserved hypothetical protein, possibly involved in molybdenum cofactor biosynthesis	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein ygfJ	hypotehtical YgfJ	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized MobA-related protein-like protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypotehtical YgfJ	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized MobA-related protein	Putative uncharacterized protein precursor	
ECOLI02777	Uncharacterized protein ygfK	putative oxidoreductase, Fe-S subunit	Hypothetical protein ygfK	Uncharacterized protein ygfK	Putative uncharacterized protein	Putative uncharacterized protein ygfK	pyridine nucleotide-disulphide oxidoreductase domain protein identified by match to protein family HMM PF00070; match to protein family HMM PF07992	FAD dependent oxidoreductase	putative oxidoreductase, Fe-S subunit	Pyridine nucleotide-disulfide oxidoreductase	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Oxidoreductase, pyridine nucleotide-disulfide family	Oxidoreductase, pyridine nucleotide-disulfide family	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Predicted oxidoreductase, Fe-S subunit	Oxidoreductase, pyridine nucleotide-disulfide family	Oxidoreductase, pyridine nucleotide-disulfide family	Selenate reductase YgfK	Oxidoreductase, pyridine nucleotide-disulfide family	Oxidoreductase, pyridine nucleotide-disulfide family	Oxidoreductase, pyridine nucleotide-disulfide family	Uncharacterized protein ygfk	Putative selenate reductase	Putative oxidoreductase	Putative oxidoreductase, Fe-S subunit	Putative oxidoreductase, Fe-S subunit	Putative oxidoreductase, Fe-S subunit	Putative oxidoreductase, Fe-S subunit	Putative oxidoreductase, Fe-S subunit	
ECOLI02778	Protein ssnA	putative proteoglycan	SsnA protein	N-ethylammeline chlorohydrolase	Putative proteoglycan	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative cytosine deaminase	Code: FR; COG: COG0402 putative proteoglycan	SsnA protein	SsnA protein	Amidohydrolase	amidohydrolase PFAM: amidohydrolase; Amidohydrolase 3 KEGG: sme:SMb20288 hypothetical protein	protein SsnA identified by match to protein family HMM PF01979	ssnA protein identified by similarity to SP:Q46812; match to protein family HMM PF01979	putative amidohydrolase Also similar to CD2084 (92.4 38d)	cytosine deaminase or related metal-dependent hydrolase	putative chlorohydrolase/aminohydrolase SsnA	Cytosine deaminase or related metal-dependent hydrolase	Putative amidohydrolase	Amidohydrolase	Amidohydrolase family protein SsnA	Amidohydrolase	Selenium metabolism protein SsnA	Amidohydrolase family protein	Amidohydrolase	Predicted chlorohydrolase/aminohydrolase	Amidohydrolase family protein	Amidohydrolase family protein SsnA	Selenium metabolism protein SsnA	Amidohydrolase family protein SsnA	
ECOLI02779	Uncharacterized protein ygfM	Hypothetical protein ygfM	nicotine dehydrogenase chain A	Uncharacterized protein ygfM	Code: C; COG: COG1319 conserved hypothetical protein	Putative uncharacterized protein	Carbon-monoxide dehydrogenase	molybdopterin dehydrogenase, FAD-binding protein PFAM: molybdopterin dehydrogenase, FAD-binding CO dehydrogenase flavoprotein-like KEGG: rpb:RPB_3094 carbon-monoxide dehydrogenase	Putative uncharacterized protein ygfM	Molybdopterin dehydrogenase, FAD-binding	FAD binding domain in molybdopterin dehydrogenase protein identified by match to protein family HMM PF00941; match to protein family HMM PF03450	putative oxidoreductase	Molybdopterin dehydrogenase, FAD-binding	Oxidoreductases, FAD binding	Molybdopterin dehydrogenase FAD-binding	Molybdopterin dehydrogenase, FAD-binding	Molybdopterin dehydrogenase FAD-binding	Predicted oxidoreductase	Oxidoreductases, FAD binding	Selenate reductase, FAD-binding subunit	Putative selenate reductase, FAD-binding subunit	Molybdopterin dehydrogenase, FAD-binding	Putative dehydrogenase	Putative selenate reductase, FAD-binding subunit	Putative uncharacterized protein	Putative oxidoreductase	Putative oxidoreductase	Putative oxidoreductase	Putative oxidoreductase	
ECOLI02780	Probable hypoxanthine oxidase xdhD	putative dehydrogenase	Possible hypoxanthine oxidase xdhD	Probable hypoxanthine oxidase xdhD	Code: C; COG: COG1529 putative dehydrogenase	aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding	Possible hypoxanthine oxidase XdhD	Possible hypoxanthine oxidase XdhD	possible hypoxanthine oxidase XdhD identified by match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738	xanthine dehydrogenase, molybdenum binding subunit Also similar to CD2079 (49.9 38d)	putative xanthine/hypoxanthine oxidase: molybdopterin-binding subunit/Fe-S binding subunit	Probable xanthine dehydrogenase molybdenum binding subunit	Putative dehydrogenase	Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding	Putative hypoxanthine oxidase XdhD	Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding	Xanthine dehydrogenase	Fused predicted xanthine/hypoxanthine oxidase: molybdopterin-binding subunit; Fe-S binding subunit	Putative hypoxanthine oxidase XdhD	Selenate reductase, molybdenum-binding subunit	Putative hypoxanthine oxidase XdhD	Putative hypoxanthine oxidase	Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding	Putative hypoxanthine oxidase XdhD	Putative dehydrogenase	aldehyde oxidase and xanthine dehydrogenase molybdopterin binding PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_1728 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding	Fused putative xanthine/hypoxanthine oxidase: molybdopterin-binding subunit ; Fe-S binding subunit	Fused putative xanthine/hypoxanthine oxidase: molybdopterin-binding subunit ; Fe-S binding subunit	Fused putative xanthine/hypoxanthine oxidase: molybdopterin-binding subunit ; Fe-S binding subunit	
ECOLI02781	Putative purine permease ygfO	similar to ca|CA1407|CaUAPC Candida albicans purine permease (by homology), start by similarity	Xanthine/uracil permease family protein	Probable transporter	Putative purine permease ygfO	Putative purine permease ygfO	Putative transmembrane transport protein	uracil-xanthine permease	Putative transmembrane transport protein	Putative transport protein	xanthine/uracil permease family protein identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801	putative xanthine/uracil permease	Uric acid-xanthine permease (UAPA transporter) go_component: membrane; go_function: transporter activity; go_process: transport	predicted transporter	Putative transmembrane transport protein	hypothetical protein	ustilago_maydis hypothetical protein	Xanthine/uracil permease family protein	Probable transporter	xanthine/uracil permease family protein Code: F; COG: COG2233	jgi|Lotgi1|153464|fgenesh2_pg.C_sca_3000367	Predicted transporter	Xanthine/uracil permease family protein	Uracil-xanthine permease	Xanthine/uracil permease family protein	Xanthine/uracil/vitamin C permease	Xanthine permease	Xanthine permease	Putative transmembrane transport protein	
ECOLI02782	Guanine deaminase	similar to sp|Q07729 Saccharomyces cerevisiae YDL238c singleton, start by similarity	DEHA2A05302p;similar to uniprot|Q07729 Saccharomyces cerevisiae YDL238C GUD1 Guanine deaminase;	Chlorohydrolase	Putative amidohydrolase family protein	Guanine deaminase	Guanine deaminase	putative guanine aminohydrolase	Guanine deaminase	identified by match to TIGR protein family HMM TIGR01224 chlorohydrolase family protein	Guanine deaminase	GUANINE DEAMINASE	Putative uncharacterized protein ygfP	guanine deaminase	Probable guanine deaminase (Guanine aminohydrolase) (Gah) protein	Similar to guanine deaminase hypothetical protein	Similar to guanine deaminase hypothetical protein	identified by similarity to SP:P76641; match to protein family HMM PF01979 guanine deaminase, putative	Probable guanine deaminase	identified by similarity to SP:P76641; match to protein family HMM PF01979 amidohydrolase family protein	Guanine deaminase	similar to BR0354, chlorohydrolase family protein chlorohydrolase family protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme guanine deaminase	metal-dependent hydrolases; COG0402 cytosine deaminase	go_component: cytoplasm [goid 0005737]; go_function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [goid 0016811]; go_process: guanine metabolism [goid 0046098] chlorohydrolase family protein	Guanine deaminase	Guanine deaminase	Amidohydrolase	
ECOLI02783	Uncharacterized protein ygfQ	Hypothetical protein	Putative uncharacterized protein	Similar to putative xanthine/uracil permease and YjcD of Escherichia coli	Putative uncharacterized protein	Putative uncharacterized protein	xanthine/uracil permease family protein identified by match to protein family HMM PF00860; match to protein family HMM PF00916	putative transporter	Inorganic anion transporter, sulfate permease (SulP) family	Xanthine/uracil/vitamin C permease	Predicted transporter	Inorganic anion transporter, sulfate permease (SulP) family	Xanthine/uracil/vitamin C permease	Inorganic anion transporter, sulfate permease (SulP) family	Putative permease	Inorganic anion transporter, sulfate permease (SulP) family	Putative transport protein	Putative transporter	Putative transporter	Putative transporter	Putative transporter	Putative transporter	Purine permease	Predicted transporter	Putative transporter	YgfQ protein	Putative transport protein	Predicted transporter	Putative uncharacterized protein	
ECOLI02784	Putative electron transport protein ygfS	Carbon-monoxide dehydrogenase, Fe-S subunit	Carbon monoxide dehydrogenase, iron sulfur subunit	Formate hydrogenlyase, iron-sulfur subunit 2	Putative oxidoreductase, Fe-S subunit	Iron-sulfur cluster-binding protein	Putative electron transport protein ygfS	Electron transport protein	Electron transport protein	Putative oxidoreductase, Fe-S subunit	iron-sulfur cluster-binding protein	Code: C; COG: COG1142 putative oxidoreductase, Fe-S subunit	iron-sulfur cluster-binding protein	carbon-monoxide dehydrogenase, Fe-S subunit	Putative oxidoreductase, Fe-S subunit	Putative electron transport protein YgfS	4Fe-4S ferredoxin, iron-sulfur binding	Putative electron transport protein YgfS	4Fe-4S ferredoxin, iron-sulfur binding domain protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: mhu:Mhun_1271 4Fe-4S ferredoxin, iron-sulfur binding	putative oxidoreductase, 4Fe-4S ferredoxin-type subunit	4Fe-4S ferredoxin iron-sulfur binding domain protein	4Fe-4S binding protein	4Fe-4S ferredoxin iron-sulfur binding domain protein	4Fe-4S binding protein	4Fe-4S ferredoxin iron-sulfur binding domain protein	4Fe-4S binding protein	4Fe-4S ferredoxin	4Fe-4S ferredoxin iron-sulfur binding domain protein	
ECOLI02785	Uncharacterized protein ygfT	Hypothetical protein ygfT	Putative oxidoreductase, Fe-S subunit	Code: ER; COG: COG0493 putative oxidoreductase, Fe-S subunit	Putative uncharacterized protein	Putative uncharacterized protein ygfT	putative NADPH-dependent glutamate synthase beta chain	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Protein aegA homolog	Fused predicted oxidoreductase: Fe-S subunit; nucleotide-binding subunit	Protein aegA	Glutamate synthase, small subunit	Protein aegA	Glutamate synthase, small subunit	Putative oxidoreductase	Fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit	NADPH-dependent glutamate synthase small subunit	Fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit	Fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit	Fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit	Fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit	Fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit	Fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Fused predicted oxidoreductase: Fe-S subunit, nucleotide-binding subunit	Fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit	fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit	Fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit	Putative oxidoreductase	
ECOLI02786	Putative purine permease ygfU	Xanthine permease	Probable transporter	Xanthine permease	Lmo1884 protein	Xanthine/uracil permeases	Xanthine permease	Xanthine permease	Putative permease protein	hypothetical xanthine/uracil permease	Putative purine permease ygfU	identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801 xanthine permease	Xanthine/uracil permeases family protein	Putative permease	CDS_ID OB1062 xanthine permease	similar to AX067041-1|CAC26748.1| percent identity: 86 in 628 aa putative purine permease	Lin1997 protein	Residues 1 to 505 of 505 are 99 pct identical to residues 1 to 505 of a 505 aa protein from Escherichia coli K12 ref: NP_417364.1 putative permease	Putative xanthine permease transmembrane protein	Xanthine , uracil transport protein	identified by similarity to EGAD:30678; match to protein family HMM PF00860; match to protein family HMM TIGR00801 xanthine permease	Xanthine permease	Xanthine permease	InterProMatches:IPR006042; Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) xanthine permease	xanthine permease	Xanthine permease	xanthine permease	Ortholog of S. aureus MRSA252 (BX571856) SAR0407 putative xanthine permease	Putative purine permease	
ECOLI02787	Isopentenyl-diphosphate Delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	hypothetical isopentenyldiphosphate isomerase	Isopentenyl-diphosphate Delta-isomerase	probable isopentenyl-diphosphate delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	similar to AX066657-1|CAC26556.1| percent identity: 86 in 189 aa putative isopentenyl-diphosphate delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	SC5F2A.33c, possible IPP isomerase, len: 197 aa; similar to many e.g. SW:BCH4_RHOCA bacteriochlorophyll synthase (176 aa) fasta scores; opt: 354, z-score: 431.9, E(): 9.6e-17, (42.0% identity in 157 aa overlap) and SW:IPPI_SCHPO isopentenyl diphosphate isomerase from Schizosaccharomyces pombe (227 aa) fasta scores; opt: 219, z-score: 270.0, E(): 9.9e-08, (36.0% identity in 178 aa overlap). putative IPP isomerase	Residues 1 to 182 of 182 are 97 pct identical to residues 1 to 182 of a 190 aa protein pdb: 1HZT Chain A, Crystal Structure Of Metal-Free Isopentenyl Diphosphate:dimethylallyl Diphosphate Isomerase	Isopentenyl-diphosphate Delta-isomerase 1	identified by similarity to SP:P26173; match to protein family HMM PF00293; match to protein family HMM TIGR02150 isopentyl-diphosphate delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	Mb1774c, idi, len: 176 aa. Equivalent to Rv1745c, len: 203 aa, from Mycobacterium tuberculosis strain H37Rv, (99.4% identity in 176 aa overlap). Probable idi, isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2), similar to Q46822|ORF_O182 from Escherichia coli (182 aa), FASTA scores: opt: 465, E(): 4.7e-25, (46.9% identity in 162 aa overlap), and to IPPI_SCHPO|Q10132 isopentenyl-diphosphate delta-isomerase from Schizosaccharomyces pombe (227 aa), FASTA scores: opt: 185, E(): 5.4e-06, (30.3% identity in 152 aa overlap).  BELONGS TO THE IPP ISOMERASE TYPE 1 FAMILY.  REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, truncation at the 3' end due to a single base tranversion (g-t), leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (176 aa versus 203 aa). Probable isopentenyl-diphosphate delta-isomerase IDI (IPP isomerase) (Isopentenyl pyrophosphate isomerase)	IPR000086: NUDIX hydrolase; IPR002667: Isopentenyl-diphosphate delta-isomerase isopentenyldiphosphate isomerase	similar to Salmonella typhi CT18 probable isomerase probable isomerase	isopentenyl-diphosphate delta-isomerase	Isopentenyl-diphosphate Delta-isomerase	putative isopentenyl-diphosphate delta-isomerase	isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) I	Code: I; COG: COG1443 putative enzyme	pfam: NUDIX domain, COG1443: Isopentenyldiphosphate isomerase, KEGG hit: (mvaD) diphosphomevalonate decarboxylase Citation: Addlesee HA, Fiedor L, Hunter CN.  (2000) J Bacteriol. 182(11):3175-82. Isopentenyl-diphosphate delta-isomerase	Code: I; COG: COG1443 putative enzyme	Isopentenyl-diphosphate delta-isomerase, type 1	
ECOLI02788	Lysyl-tRNA synthetase	highly similar to sp|P15180 Saccharomyces cerevisiae YDR037w KRS1 lysyl-tRNA synthetase, cytosolic, start by similarity	Lysyl-tRNA synthetase, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC18.08]	LYSYL tRNA SYNTHETASE;04_0580, LYSYL tRNA SYNTHETASE, SYK_CRILO, gene found by Glimmer, modified ATG by annotation;	highly similar to uniprot|P15180 Saccharomyces cerevisiae YDR037w KRS1 lysyl-tRNA synthetase;	DEHA2F06820p;similar to uniprot|P15180 Saccharomyces cerevisiae YDR037W KRS1 Lysyl-tRNA synthetase;	similar to SP:P80105; identified by sequence similarity; putative lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	putative lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Residues 1 to 505 of 505 are 99 pct identical to residues 1 to 505 of a 505 aa protein from Escherichia coli K12 ref: NP_417366.1 lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Highly similar to lysyl-tRNA synthetase hypothetical protein	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	identified by similarity to SP:P13030; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	IPR002312: Aspartyl-tRNA synthetase, class IIb; IPR002313: Lysyl-tRNA synthetase, class-2; IPR004364: tRNA synthetase, class II (D, K and N);IPR004365: OB-fold nucleic acid binding domain;IPR006195: Aminoacyl-transfer RNA synthetase, class II lysine tRNA synthetase, constitutive	


ECOLI02790	Single-stranded-DNA-specific exonuclease recJ	Single-stranded-DNA-specific exonuclease recJ	Single-stranded-DNA-specific exonuclease RecJ	Single-stranded DNA exonuclease	Putative single stranded DNA exonuclease	Single-stranded-DNA-specific exonuclease recJ	identified by match to PFAM protein family HMM PF03020 single-stranded-DNA-specific exonuclease RecJ	Single-stranded-DNA-specific exonuclease recJ	Single-stranded-DNA-specific exonuclease RecJ	Single-strand-DNA-specific exonuclease RecJ	Possible single-stranded-DNA-specific exonuclease	Probable single-strand DNA-specific exonuclease	Single-stranded-DNA-specific exonuclease RecJ	Single-stranded-DNA-specific exonuclease RecJ	Single-stranded-DNA-specific exonuclease RecJ	Single-stranded-DNA-specific exonuclease RecJ	RecJ	Single-stranded-DNA-specific exonuclease RecJ	Putative single-stranded-DNA-specific exonuclease	Single-stranded DNA-specific exonuclease	Single-stranded-DNA-specific exonuclease, putative	Single-stranded-DNA-specific exonuclease recJ	Single-stranded DNA specific exonuclease RecJ	Single-stranded-DNA-specific exonuclease	Single-stranded DNA-specific exonuclease	Single-stranded-DNA-specific exonuclease	Related to single-strand DNA-specific exonuclease	Lmo1525 protein	Single-stranded DNA-specific exonuclease	
ECOLI02791	Thiol:disulfide interchange protein dsbC	Disulfide isomerase	Disulfide isomerase	Thiol:disulfide interchange protein dsbC	Thiol:disulfide interchange protein dsbC	Thiol:disulfide interchange protein DsbC	Protein-disulfide isomerase	Thiol:disulfide interchange protein	hypothetical protein	Thiol:disulfide interchange protein dsbC	Thiol:disulfide interchange protein DsbC	Probable thiol:disulfide interchange protein dsbC	Probable thiol:disulfide interchange protein dsbC	Thiol:disulfide interchange protein DsbC	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein DsbC	Probable thiol:disulfide interchange protein dsbC	Thiol:disulfide interchange protein DsbC	Thiol:disulfide interchange protein dsbC	Protein-disulfide isomerase	Residues 1 to 236 of 236 are 99 pct identical to residues 1 to 236 of a 236 aa protein from Escherichia coli O157:H7 ref: NP_311792.1 protein disulfide isomerase II	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein DsbC	Chitinase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark disulfide isomerase	IPR000345: Cytochrome c heme-binding site; IPR006662: Thioredoxin type domain protein disulfide isomerase II	similar to Salmonella typhi CT18 thiol:disulfide interchange protein thiol:disulfide interchange protein	Disulfide isomerase	Thiol:disulfide interchange protein	
ECOLI02792	Tyrosine recombinase xerD	Integrase/recombinase XerD	XerC/D integrase-recombinase protein	Tyrosine recombinase xerD	Tyrosine recombinase xerD	Tyrosine recombinase xerD	similar to GB:D00173, GB:S46963, SP:P11712, SP:P11713, SP:P33259, SP:P33261, PID:181362, PID:181364, PID:181366,  and PID:219571; identified by sequence similarity; putative integrase/recombinase XerD	Integrase	Tyrosine recombinase xerD	Site-specific integrase/recombinase XerD related protein	Probable integrase/recombinase	Integrase/recombinase XerD, putative	Tyrosine recombinase xerD	Tyrosine recombinase xerD	Tyrosine recombinase xerD	Tyrosine recombinase xerD	Tyrosine recombinase xerD	DNA recombinase	Tyrosine recombinase xerD	Tyrosine recombinase xerD	Tyrosine recombinase xerD	Tyrosine recombinase xerD	Integrase/recombinase XerD	Tyrosine recombinase xerD	Tyrosine recombinase xerD	Tyrosine type site-specific recombinase	DNA integration/recombination/invertion protein	Integrase/recombinase	Putative integrase/recombinase	
ECOLI02793	Flavodoxin-2	Flavodoxin	Flavodoxin	Flavodoxin	Flavodoxin	Flavodoxin-2	putative flavodoxin 2	Flavodoxin-2	Flavodoxin 2	Flavodoxin 2	Flavodoxin 2	Flavodoxin-2	Flavodoxins	Residues 1 to 173 of 173 are 99 pct identical to residues 1 to 173 of a 173 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289464.1 flavodoxin 2	Flavodoxin 2	Flavodoxin 2	IPR001226: Flavodoxin; IPR008254: Flavodoxin/nitric oxide synthase flavodoxin 2	similar to Salmonella typhi CT18 flavodoxin II flavodoxin II	Flavodoxin 2	flavodoxin	Flavodoxin	Flavodoxin-2	identified by match to protein family HMM PF00258; match to protein family HMM TIGR01752 flavodoxin	Code: C; COG: COG0716 flavodoxin 2	Evidence 2b : Function of strongly homologous gene; Product type c : carrier flavodoxin 2	Code: C; COG: COG0716 flavodoxin 2	flavodoxin II	Code: C; COG: COG0716 flavodoxin 2	Flavodoxin 2	
ECOLI02794	Uncharacterized protein ygfX	Hypothetical protein ygfX	Putative membrane protein	Putative uncharacterized protein	Residues 1 to 135 of 135 are 98 pct identical to residues 1 to 135 of a 135 aa protein from Escherichia coli K12 ref: NP_417372.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YgfX of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein	Hypothetical protein	Putative uncharacterized protein ygfX	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ygfX	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	
ECOLI02795	UPF0350 protein ygfY	UPF0350 protein XCC2128	UPF0350 protein HI0627	UPF0350 protein PM1790	UPF0350 protein PA0760	UPF0350 protein VV2841	UPF0350 protein ygfY	conserved hypothetical protein	UPF0350 protein ygfY	UPF0350 protein VC_2471	UPF0350 protein SO_1339	UPF0350 protein ECA0759	UPF0350 protein PSPTO_4227	UPF0350 protein VP2582	UPF0350 protein ygfY	UPF0350 protein CBU_0870	UPF0350 protein VV1_1557	Residues 1 to 88 of 88 are 98 pct identical to residues 1 to 88 of a 88 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289466.1 orf, conserved hypothetical protein	UPF0350 protein YPO0897/y3282/YP_3594	UPF0350 protein NE2372	UPF0350 protein WIGBR4380	UPF0350 protein plu3555	Conserved hypothetical protein hypothetical protein	Conserved hypothetical protein hypothetical protein	UPF0350 protein XF_1074	IPR005631: Protein of unknown function DUF339 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0350 protein YPTB3173	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	
ECOLI02796	tRNA-modifying protein ygfZ	Putative uncharacterized protein	Uncharacterized protein HI0466	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	tRNA-modifying protein ygfZ	Glycine cleavage system T protein, aminomethyltransferase	tRNA-modifying protein ygfZ	Putative uncharacterized protein	hypothetical protein	tRNA-modifying protein ygfZ	tRNA-modifying protein ygfZ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	tRNA-modifying protein ygfZ	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	tRNA-modifying protein ygfZ	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	tRNA-modifying protein ygfZ	tRNA-modifying protein ygfZ	hypothetical protein	tRNA-modifying protein ygfZ	tRNA-modifying protein ygfZ	Residues 1 to 326 of 326 are 100 pct identical to residues 1 to 326 of a 326 aa protein from Escherichia coli K12 ref: NP_417374.1 orf, conserved hypothetical protein	
ECOLI02797	UPF0073 inner membrane protein yqfA	Hemolysin III	Hemolysin III protein	Hemolysin III	similarity to HYPOTHETICAL INTEGRAL MEMBRANE PROTEINS YA85_MYCTU;06_1500, similarity to HYPOTHETICAL INTEGRAL MEMBRANE PROTEINS YA85_MYCTU, Y117 BORBU, gene found by Glimmer;	Hemolysin III	Putative uncharacterized protein	Putative uncharacterized protein	Probable hemolysin III	Hemolysin III	Putative hemolysin	Putative uncharacterized protein	Hemolysin III homolog	Hemolysin III	Putative membrane protein	Hemolysin III	Related to hemolysin III	Lmo1864 protein	Hemolysin III	Hemolysin III	Hemolysin III	Putative hemolysin	Putative Hemolysin	Hemolysin III	UPF0073 inner membrane protein yqfA	Hemolysin	identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065 hemolysin III	similar to GP:15155898, GB:M27339, and PID:540472; identified by sequence similarity; putative channel protein, hemolysin III family	Hemolysin III homolog	
ECOLI02798	UPF0267 protein yqfB	UPF0267 protein PM1447	UPF0267 protein VVA0554	UPF0267 protein yqfB	conserved hypothetical protein	UPF0267 protein yqfB	UPF0267 protein VC_1576	UPF0267 protein SO_1922	UPF0267 protein VPA1414	UPF0267 protein yqfB	UPF0267 protein VV2_0047	UPF0267 protein YPO1778/y2529/YP_1615	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0267 protein YPTB1654	conserved hypothetical protein	Similar to: HI1394, YD94_HAEIN conserved hypothetical protein	UPF0267 protein yqfB	conserved hypothetical protein	Code: S; COG: COG3097 conserved hypothetical protein	Code: S; COG: COG3097 conserved hypothetical protein	Code: S; COG: COG3097; orf conserved hypothetical protein	UPF0267 protein yqfB	Hypothetical protein	Uncharacterized conserved protein UCP029143	Hypothetical protein	Hypothetical protein	UPF0267 protein yqfB	
ECOLI02799	6-phospho-beta-glucosidase bglA	6-phospho-beta-glucosidase bglA	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase A; cryptic	Residues 7 to 485 of 485 are 98 pct identical to residues 1 to 479 of a 479 aa protein from Escherichia coli K12 ref: NP_417377.1 6-phospho-beta-glucosidase A; cryptic	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	phospho-beta-galactosidase I	IPR001360: Glycoside hydrolase, family 1 6-phospho-beta-glucosidase A	similar to Salmonella typhi CT18 6-phospho-beta-glucosidase 6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	Ortholog of S. aureus MRSA252 (BX571856) SAR0264 6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase A	Code: G; COG: COG2723 6-phospho-beta-glucosidase A, cryptic	identified by similarity to EGAD:36677; match to protein family HMM PF00232 6-phospho-beta-glucosidase	Code: G; COG: COG2723 6-phospho-beta-glucosidase A; cryptic	6-phospho-beta-glucosidase identified by match to protein family HMM PF00232	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase BglA	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase, putative	6-phospho-beta-glucosidase BglA	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase A Code: G; COG: COG2723	6-phospho-beta-glucosidase	
ECOLI02800	Uncharacterized oxidoreductase ygfF	Residues 1 to 205 of 205 are 99 pct identical to residues 43 to 247 of a 247 aa protein from Escherichia coli K12 ref: NP_417378.1 putative oxidoreductase	Similar to hypothetical oxidoreductase YgfF protein of Escherichia coli	Code: IQR; COG: COG1028 putative oxidoreductase	Short-chain dehydrogenase/reductase SDR	transcript_id=ENSOPRT00000011921	Putative oxidoreductase	NAD dependent epimerase/dehydratase family	Short-chain dehydrogenase/reductase SDR	Predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain	NAD dependent epimerase/dehydratase family	Short-chain dehydrogenase/reductase SDR	Putative uncharacterized protein	NAD dependent epimerase/dehydratase family	Short chain dehydrogenase	NAD dependent epimerase/dehydratase family	Putative oxidoreductase	Putative NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain	Short-chain dehydrogenase/reductase SDR	Putative NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain	YgfF protein	Predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain	predicted NAD(P)-binding oxidoreductase contains NAD(P)-binding Rossmann-fold domain	Predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain	
ECOLI02801	Glycine dehydrogenase	similar to sp|P49095 Saccharomyces cerevisiae YMR189w GSD2 glycine decarboxylase P subunit, start by similarity	similar to sp|P49095 Saccharomyces cerevisiae YMR189w GSD2 glycine decarboxylase P subunit singleton, hypothetical start	Glycine dehydrogenase	DEHA2F03806p;similar to uniprot|P49095 Saccharomyces cerevisiae YMR189W GCV2 P subunit of the mitochondrial glycine decarboxylase complex required for the catabolism of glycine to 5 10-methylene-THF;	Glycine dehydrogenase	Glycine cleavage system P-protein	Glycine dehydrogenase [decarboxylating] 2	Glycine dehydrogenase	Glycine dehydrogenase	Glycine dehydrogenase	Glycine dehydrogenase	Glycine dehydrogenase	Glycine dehydrogenase	identified by match to PFAM protein family HMM PF02347 glycine cleavage system P protein	go_component: mitochondrion [goid 0005739]; go_function: glycine dehydrogenase (decarboxylating) activity [goid 0004375]; go_process: one-carbon compound metabolism [goid 0006730] glycine dehydrogenase mitochondrial precursor, putative	Glycine dehydrogenase	Glycine dehydrogenase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLYCINE DEHYDROGENASE DECARBOXYLATING PROTEIN	Glycine cleavage system P protein	Glycine dehydrogenase	Glycine dehydrogenase	Glycine dehydrogenase	Glycine dehydrogenase	glycine cleavage system protein P	Glycine dehydrogenase	Glycine dehydrogenase	Glycine cleavage system protein p	Residues 1 to 957 of 957 are 99 pct identical to residues 1 to 957 of a 957 aa protein from Escherichia coli K12 ref: NP_417379.1 glycine decarboxylase, P protein of glycine cleavage system	
ECOLI02802	Glycine cleavage system H protein	H subunit of the mitochondrial glycine decarboxylase complex, required for the catabolism of glycine to 5,10- methylene-THF; expression is regulated by levels of levels of 5,10-methylene-THF in the cytoplasm.  [Source:SGD;Acc:S000000042]	similar to sp|P39726 Saccharomyces cerevisiae YAL044c GCV3 glycine decarboxylase, subunit H, hypothetical start	Glycine cleavage system H protein	Putative glycine cleavage system H protein, mitochondrial [Source:GeneDB_Spombe;Acc:SPBP19A11.01]	similar to sp|P39726 Saccharomyces cerevisiae YAL044c GCV3 glycine decarboxylase, subunit H singleton, start by similarity	Glycine cleavage system H protein	Probable glycine cleavage system H protein 1	Glycine cleavage system H protein	Glycine cleavage system H protein	Glycine cleavage system H protein	Probable glycine cleavage system H protein	similar to uniprot|P39726 Saccharomyces cerevisiae YAL044c GCV3 glycine decarboxylase subunit H;	Probable glycine cleavage system H protein	DEHA2D05368p;similar to uniprot|P39726 Saccharomyces cerevisiae YAL044C GCV3 H subunit of the mitochondrial glycine decarboxylase complex;	Probable glycine cleavage system H protein	Probable glycine cleavage system H protein	identified by match to PFAM protein family HMM PF00364 glycine cleavage system H protein	Glycine cleavage system H protein	Glycine cleavage system H protein	Glycine cleavage system H protein	Glycine cleavage system H protein	Glycine cleavage system H protein 4	Glycine cleavage system H protein	Probable glycine cleavage system H protein	Probable glycine cleavage system H protein	Probable glycine cleavage system H protein	hypothetical glycine cleavage system H protein	Probable glycine cleavage system H protein	
ECOLI02803	Aminomethyltransferase	Aminomethyltransferase	aminomethyltransferase, mitochondrial precursor	Aminomethyltransferase	Aminomethyltransferase	Probable aminomethyltransferase	Probable aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Probable aminomethyltransferase	Probable aminomethyltransferase	hypothetical aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	Aminomethyltransferase	
ECOLI02804	Protein visC	Putative flavin-dependent monooxygenase, involved in ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with other ubiquinone biosynthetic enzymes.  [Source:SGD;Acc:S000003487]	similar to sp|P53318 Saccharomyces cerevisiae Ubiquinone biosynthesis monooxgenase COQ6 (EC 1.14.13.-), start by similarity	Probable ubiquinone biosynthesis monooxygenase coq6 [Source:GeneDB_Spombe;Acc:SPBC146.12]	similar to sp|P53318 Saccharomyces cerevisiae YGR255c COQ6 monooxygenase singleton, start by similarity	Oxygenase	similar to uniprot|P53318 Saccharomyces cerevisiae YGR255c COQ6 monooxygenase;	DEHA2E14740p;similar to uniprot|P53318 Saccharomyces cerevisiae YGR255C COQ6 Putative flavin-dependent monooxygenase involved in ubiquinone (Coenzyme Q) biosynthesis and similar to ca|CA5081|CaCOQ6 Candida albicans CaCOQ6 monooxygenase (by homology);	VisC	Probable FAD-dependent monooxygenase	VisC protein	Possible monooxygenase	Putative monooxygenase	putative VisC protein	Protein visC	identified by match to PFAM protein family HMM PF01494 UbiH/COQ6 monooxygenase family	VisC protein	Putative monooxygenase	Putative monooxygenase	go_component: mitochondrion [goid 0005739]; go_function: ubiquinone biosynthesis monooxygenase activity [goid 0015997]; go_process: ubiquinone metabolism [goid 0006743] ubiquinone biosynthesis monooxygenase, putative	Oxidoreductase, FAD-binding, UbiH/Coq6 family	Putative monooxygenase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE OXIDOREDUCTASE PROTEIN	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	Putative monooxygenase	Monooxygenase family protein	2-OCTAPRENYL-3-METHYL-6-METHOXY-1,4-BENZOQUINOL HYDROXYLASE	VisC protein	Putative uncharacterized protein visC	
ECOLI02805	2-octaprenyl-6-methoxyphenol hydroxylase	2-octaprenyl-6-methoxyphenol hydroxylase	Putative uncharacterized protein	UbiH protein	2-polyprenyl-6-methoxyphenol hydroxylase	2-octaprenyl-6-methoxyphenol hydroxylase	Putative ubiquinone biosynthesis-related protein	hypothetical ubiH protein	2-octaprenyl-6-methoxyphenol hydroxylase	UbiH protein	2-octaprenyl-6-methoxyphenol hydroxylase	2-octaprenyl-6-methoxyphenol hydroxylase	2-octaprenyl-6-methoxyphenyl hydroxylase	Putative monooxygenase	2-octaprenyl-6-methoxyphenol hydroxylase	UbiH protein	2-octaprenyl-6-methoxyphenol--] 2-octaprenyl-6- methoxy-1, 4-benzoquinone	CDS_ID OB0638 pentachlorophenol-4-monooxygenase	2-polyprenyl-6-methoxyphenol hydroxylase	Residues 1 to 392 of 392 are 97 pct identical to residues 1 to 392 of a 392 aa protein from Escherichia coli K12 ref: NP_417383.1 2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1, 4-benzoquinone	2-octaprenyl-6-methoxyphenol hydroxylase	Aromatic-ring hydroxylase	UbiH protein	Probable 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase protein	2-octaprenyl-6-methoxyphenol hydroxylase	similar to 2-octaprenyl-6-methoxyphenol hydroxylase hypothetical protein	conserved gene 2-octaprenyl-6-methoxyphenol hydroxylase	similar to 2-octaprenyl-6-methoxyphenol hydroxylase hypothetical protein	2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase protein	
ECOLI02806	Xaa-Pro aminopeptidase	hypothetical protein;similar to aminopeptidase;	Uncharacterized peptidase C12B10.05 [Source:GeneDB_Spombe;Acc:SPAC12B10.05]	Xaa-Pro dipeptidase	X-pro aminopeptidase	Aminopeptidase P	Aminopeptidase P	Aminopeptidase P	Xaa-Pro aminopeptidase	Putative Xaa-Pro aminopeptidase	Xaa-Pro aminopeptidase I	Putative aminopeptidase P	Putative aminopeptidase P	Probable X-pro aminopeptidase	PepP	Aminopeptidase P	Xaa-Pro aminopeptidase	Proline aminopeptidase II	Aminopeptidase P	Putative xaa-pro aminopeptidase	Xaa-Pro aminopeptidase	Xaa-Pro aminopeptidase	Aminopeptidase P	Aminopeptidase P	Xaa-Pro aminopeptidase	identified by similarity to SP:P15034; match to protein family HMM PF00557; match to protein family HMM PF05195 xaa-pro aminopeptidase, putative	Xaa-Pro aminopeptidase	Putative Xaa-Pro aminopeptidase	Putative Xaa-Pro aminopeptidase	
ECOLI02807	UPF0149 protein ygfB	UPF0149 protein XCC3260	UPF0149 protein HI0817	UPF0149 protein PM1723	UPF0149 protein PA5225	UPF0149 protein VV2847	UPF0149 protein ygfB	conserved hypothetical protein	UPF0149 protein ygfB	UPF0149 protein VC_2476	Putative uncharacterized protein	Putative uncharacterized protein	UPF0149 protein PSPTO_5224	UPF0149 protein VP2588	UPF0149 protein ygfB	UPF0149 protein VV1_1551	Residues 1 to 194 of 194 are 100 pct identical to residues 1 to 194 of a 194 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289477.1 orf, conserved hypothetical protein	UPF0149 protein YPO0911/y3298/YP_3608	UPF0149 protein plu3602	Similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	Similar to conserved hypothetical protein hypothetical protein	UPF0149 protein XF_2010	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR005356: Protein of unknown function UPF0149 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0149 protein XAC3406	UPF0149 protein YPTB3186	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	
ECOLI02808	Cell division protein zapA	Cell division protein zapA	Cell division protein zapA	Putative uncharacterized protein VV2848	Cell division protein zapA	conserved hypothetical protein	Hypothetical protein ygfE	Putative uncharacterized protein	Putative uncharacterized protein	Cell division protein zapA	Putative uncharacterized protein VP2590	Cell division protein zapA	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Residues 1 to 109 of 109 are 100 pct identical to residues 1 to 109 of a 109 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289478.1 orf, conserved hypothetical protein	Cell division protein zapA	Putative uncharacterized protein	YgfE protein	Similar to unknown protein YgfE of Escherichia coli	Cell division protein ZapA	IPR007838: Protein of unknown function DUF710 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Cell division protein zapA	Putative uncharacterized protein	conserved hypothetical protein	Similar to: HI0857, YGFE_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved protein	Cell division protein zapA	

ECOLI02809	Uncharacterized protein ygfA	similar to sp|P40099 Saccharomyces cerevisiae YER183c FAU1 similarity to human 5, 10-methenyltetrahydrofolate synthetase, start by similarity	Blr1527 protein	5-formyltetrahydrofolate cyclo-ligase family protein	Putative uncharacterized protein	Sll1643 protein	Putative uncharacterized protein	Uncharacterized protein HI0858	Putative 5-formyltetrahydrofolate cyclo-ligase	5-formyltetrahydrofolate cyclo-ligase, putative	Putative ligase	Putative uncharacterized protein	Probable 5-formyltetrahydrofolate cyclo-ligase	5-formyltetrahydrofolate cyclo-ligase family protein	5-formyltetrahydrofolate cyclo-ligase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	5-formyltetrahydrofolate cyclo-ligase	5-formyltetrahydrofolate cyclo-ligase	Putative uncharacterized protein STY3217	5-formyltetrahydrofolate cyclo-ligase	Probable 5-formyltetrahydrofolate cyclo-ligase	Lmo1336 protein	Putative 5-formyltetrahydrofolate cyclo-ligase	5-formyltetrahydrofolate cyclo-ligase	Possible 5-formyltetrahydrofolate cyclo-ligase	5-formyltetrahydrofolate cyclo-ligase, putative	hypothetical 5-formyltetrahydrofolatecyclo-ligase-family protein	

ECOLI02810	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase 1;	similar to sp|P40054 Saccharomyces cerevisiae YER081w SER3 3-phosphoglycerate dehydrogenase and DEHA0B11198g Debaryomyces hansenii, hypothetical start	D-3-phosphoglycerate dehydrogenase	Putative D-3-phosphoglycerate dehydrogenase [Source:GeneDB_Spombe;Acc:SPCC364.07]	highly similar to sp|P40054 Saccharomyces cerevisiae YER081w SER3 3-phosphoglycerate dehydrogenase, start by similarity	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	highly similar to uniprot|P40510 Saccharomyces cerevisiae YIL074c SER33 3-phosphoglycerate dehydrogenase;	DEHA2B11000p;highly similar to uniprot|P40510 Saccharomyces cerevisiae YIL074C SER33 3-phosphoglycerate dehydrogenase;	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	SerA	D-3-phosphoglycerate dehydrogenase	Phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	similar to SP:P08328; identified by sequence similarity; putative D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	go_component: cytoplasm [goid 0005737]; go_function: phosphoglycerate dehydrogenase activity [goid 0004617]; go_process: serine family amino acid biosynthesis [goid 0009070] d-3-phosphoglycerate dehydrogenase 2, putative	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	D-3-phosphoglycerate dehydrogenase	
ECOLI02811	Ribose-5-phosphate isomerase A	similar to sp|Q12189 Saccharomyces cerevisiae YOR095c RKI1 D-ribose-5-phosphate ketol-isomerase, hypothetical start	Ribose-5-phosphate isomerase [Source:GeneDB_Spombe;Acc:SPAC144.12]	similar to sp|Q12189 Saccharomyces cerevisiae YOR095c RKI1 D-ribose-5-phosphate ketol-isomerase singleton, start by similarity	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose 5-phosphate isomerase	Ribose 5-phosphate isomerase	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	highly similar to uniprot|Q12189 Saccharomyces cerevisiae YOR095c RKI1 D-ribose-5-phosphate ketol-isomerase;	DEHA2A09328p;similar to uniprot|Q12189 Saccharomyces cerevisiae YOR095C RKI1 Ribose-5-phosphate ketol-isomerase;	Ribose-5-phosphate isomerase A	Ribose 5-phosphate isomerase	Ribose-5-phosphate isomerase A	similar to GB:X08058, GB:X08094, GB:X08095, GB:X08096, GB:X15480, GB:X06547, GB:M24485, GB:D28456, GB:U30897, GB:U62589, SP:P09211, PID:1575434, PID:2076717, PID:2204207, PID:31946, PID:31948, PID:579940, PID:598158, PID:726098,  and PID:763405; identified by sequence similarity; putative ribose 5-phosphate isomerase	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	Ribose-5-phosphate isomerase A	hypothetical ribose 5-phosphate isomerase	
ECOLI02812	Putative uncharacterized protein yqfE	Putative uncharacterized protein	Putative uncharacterized protein yqfE	Conserved protein	Conserved domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yqfE	Putative uncharacterized protein yqfE	Putative uncharacterized protein yqfE	YqfE protein	Putative uncharacterized protein yqfE	
ECOLI02813	Chromosome initiation inhibitor	Chromosome initiation inhibitor	Chromosome initiation inhibitor	Chromosome initiation inhibitor	Putative LysR-family transcriptional regulator	putative transcriptional regulator	Chromosome initiation inhibitor	Chromosome initiation inhibitor	Chromosome initiation inhibitor	Chromosome initiation inhibitor	Chromosome initiation inhibitor	Chromosome initiation inhibitor	Putative transcriptional regulator	Putative chromosome initiation inhibitor IciA	Chromosome initiation inhibitor	Lysine export transcriptional regulatory protein LysG	Chromosome initiation inhibitor	similar to AX063767-1|CAC25125.1| percent identity: 81 in 289 aa lysine export regulator protein	SC5F8.17c, possible LysR-family transcriptional regulator, len: 300 aa. Similar to many other LysR-family proteins including: Corynebacterium glutamicum SW:LYSG_CORGL (EMBL:X96471) lysine export transcriptional regulatory protein, LysG (290 aa), fasta scores opt: 780 z-score: 918.3 E():0 44.5% identity in 290 aa overlap and Escherichia coli SW:ICIA_ECOLI (EMBL:M62865) chromosome initiation inhibitor, IciA (297 aa), fasta scores opt: 538 z-score: 635.6 E(): 6.2e-28 37.1% identity in 291 aa overlap. Contains a Prosite hit to PS00044 Bacterial regulatory proteins, lysR family signature and a Pfam match to entry PF00126 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family with the putative helix-turn-helix motif situated between residues 23..44 (+4.82 SD). putative LysR-family transcriptional regulator	Chromosome initiation inhibitor	Residues 23 to 319 of 319 are 100 pct identical to residues 1 to 297 of a 297 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289483.1 replication initiation inhibitor, binds to 13-mers at oriC	Chromosome initiation inhibitor	Chromosome initiation inhibitor	Inhibitor of chromosome initiation IciA	Transcriptional regulator protein	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain inhibitor of replication initiation, also transcriptional regulator of dnaA and argK (LysR family)	similar to Salmonella typhi CT18 chromosome intitiation inhibitor chromosome intitiation inhibitor	Chromosome initiation inhibitor	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator inhibitor of replication initiation (transcriptional regulator of dnaA and argK (affects arginine transport) (LysR family))	
ECOLI02814	Protein sbm	Methylmalonyl-CoA mutase large subunit	Putative methylmalonyl-CoA mutase, coenzyme B12- dependent alpha subunit	Methylmalonyl-CoA mutase, alpha subunit	Methylmalonyl-CoA mutase, beta subunit	Methylmalonyl-CoA mutase	Methylmalonyl-CoA mutase	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Methylmalonyl-CoA mutase, [alpha] subunit	Methylmalonyl-CoA mutase large subunit	similar to SP:O86028; identified by sequence similarity; putative methylmalonyl-CoA mutase	methylmalonyl-CoA mutase protein	Methylmalonyl-CoA mutase large subunit	methylmalonyl-CoA mutase large subunit	Putative methylmalonyl-CoA mutase alpha subunit	Methylmalonyl-CoA mutase large subunit	METHYLMALONYL-COA MUTASE	Putative methylmalonyl-CoA mutase large subunit	Methylmalonyl-CoA mutase	similar to AX065501-1|CAC25990.1| percent identity: 91 in 736 aa putative methylmalonyl-CoA mutase large subunit	methylmalonyl-CoA large subunit	Methylmalonyl-CoA mutase, subunit alpha, N- terminus	Methylmalonyl-CoA mutase alpha subunit	Methylmalonyl-COA mutase large subunit	Residues 1 to 700 of 700 are 99 pct identical to residues 15 to 714 of a 714 aa protein from Escherichia coli K12 ref: NP_417392.1 methylmalonyl-CoA mutase (MCM)	identified by similarity to SP:O86028; match to protein family HMM PF01642; match to protein family HMM PF02310; match to protein family HMM TIGR00640; match to protein family HMM TIGR00641 methylmalonyl-CoA mutase	MutB	Methylmalonyl-CoA mutase protein	Probable methylmalonyl-CoA mutase large subunit	
ECOLI02815	LAO/AO transport system kinase	Putative ArgK protein with ATPase and kinase domains	LAO/AO transport system kinase	Putative lysine arginine ornithine transport system kinase	Uncharacterized protein CC_2483	Putative uncharacterized protein	ArgK	Putative periplasmic protein kinase ArgK and related GTPases of G3E family	Putative kinase	Putative ArgK protein with ATPase and kinase domains	LAO/AO transport system ATPase	hypothetical conserved protein	Putative transporter ATPase/kinase	Kinase ArgK, involved in lysine, arginine, ornithine transport	Putative kinase	Putative nucleotide-binding protein	similar to AE007022-20|AAK45810.1| percent identity: 57 in 326 aa conserved hypothetical protein	LAO/AO transport system kinase	BH2954 protein	Transport system kinase	Residues 1 to 331 of 331 are 97 pct identical to residues 1 to 331 of a 331 aa protein from Escherichia coli K12 ref: NP_417393.1 putative nucleotide-binding protein	identified by similarity to SP:P27254; match to protein family HMM PF03308; match to protein family HMM TIGR00750 LAO/AO transport system ATPase	Putative uncharacterized protein	Uncharacterized protein Rv1496/MT1543	Mb1533, -, len: 334 aa. Equivalent to Rv1496, len: 334 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 334 aa overlap). Possible transport system kinase (EC 2.7.-.-). Equivalent to NP_302220.1|NC_002677 putative kinase from Mycobacterium leprae (327 aa). Highly similar to several transport system kinases and NTPase transporters e.g.  P27254|ARGK_ECOLI|B2918 LAO/AO transport system kinase (EC 2.7.-.-) from Escherichia coli K12 (331 aa) (see citation below); NP_311815.1|NC_002695 ATPase component of two convergent arginine transporter from Escherichia coli O157:H7 (331 aa); etc. Also similar to YPLE_CAUCR|P37895 hypothetical 34.6 kd protein in Caulobacter crescentus (326 aa), FASTA scores, opt: 1125, E(): 0, (55.7% identity in 316 aa overlap). Possible transport system kinase	kinase-like protein	Similar to Escherichia coli Lao/Ao transport system kinase ArgK or B2918 SWALL:ARGK_ECOLI (SWALL:P27254) (331 aa) fasta scores: E(): 7.2e-46, 42.08% id in 316 aa, and to Bacteroides thetaiotaomicron putative ArgK protein with ATPase and kinase domains BT4049 SWALL:Q8A0H2 (EMBL:AE016943) (364 aa) fasta scores: E(): 2.9e-124, 92.56% id in 363 aa, and to Porphyromonas gingivalis W83 Lao/Ao transport system ATPase PG0321 SWALL:AAQ65535 (EMBL:AE017173) (343 aa) fasta scores: E(): 4.2e-89, 70.44% id in 335 aa putative Lao/Ao arginine transport system kinase	LAO/AO transport system kinase	ArgK protein	
ECOLI02816	Methylmalonyl-CoA decarboxylase	Residues 1 to 261 of 261 are 99 pct identical to residues 1 to 261 of a 261 aa protein YGFG_ECOLI sp: P52045 orf, conserved hypothetical protein	Putative enoyl-CoA hydratase	Putative enoyl-CoA hydratase	Code: I; COG: COG1024 putative enzyme	Code: I; COG: COG1024 putative enzyme	Enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/isomerase	Putative enoyl-CoA hydratase	Enoyl-CoA hydratase	Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase KEGG: bcn:Bcen_0459 enoyl-CoA hydratase/isomerase	Putative enoyl-CoA hydratase	Possible dehydratase	putative enzyme Code: I; COG: COG1024	Enoyl-CoA hydratase	Putative uncharacterized protein	Methylmalonyl-CoA decarboxylase	Methylmalonyl-CoA decarboxylase, biotin- independent	Enoyl-CoA hydratase/isomerase family protein	Methylmalonyl-CoA decarboxylase	Enoyl-CoA hydratase/isomerase	Methylmalonyl-CoA decarboxylase	Enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/isomerase	Enoyl-CoA hydratase/isomerase	Methylmalonyl-CoA decarboxylase	Enoyl-CoA hydratase/isomerase family protein	Methylmalonyl-CoA decarboxylase	
ECOLI02818	Uncharacterized HTH-type transcriptional regulator ygfI	Hypothetical transcriptional regulator ygfI	Partial putative transcriptional regulator LYSR- type	similar to D85415-10|BAB62046.1| percent identity: 25 in 257 aa putative transcription regulator	Residues 1 to 290 of 321 are 99 pct identical to residues 1 to 290 of a 303 aa protein from Escherichia coli K12 ref: NP_417396.1 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Hypothetical transcriptional regulator YgfI	Hypothetical transcriptional regulator YgfI	Putative LysR-family transcriptional regulatory protein precursor	Hypothetical protein	putative transcriptional regulator YgfI	Putative uncharacterized protein	Transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	YgfI protein	Predicted DNA-binding transcriptional regulator	predicted DNA-binding transcriptional regulator	
ECOLI02817	Uncharacterized protein ygfH	acetyl-CoA hydrolase;	Acetyl-coA hydrolase, primarily localized to mitochondria; phosphorylated; required for acetate utilization and for diploid pseudohyphal growth.  [Source:SGD;Acc:S000000111]	similar to sp|P32316 Saccharomyces cerevisiae ACH1 Acetyl-CoA hydrolase (EC 3.1.2.1) (Acetyl-CoA deacylase) (Acetyl-CoA acylase), hypothetical start	Acetyl-CoA hydrolase [Source:GeneDB_Spombe;Acc:SPAC1952.09c]	highly similar to sp|P32316 Saccharomyces cerevisiae YBL015w ACH1 acetyl-CoA hydrolase singleton, start by similarity	CoA tranferase	highly similar to uniprot|P32316 Saccharomyces cerevisiae YBL015w ACH1 acetyl-CoA hydrolase;	4-hydroxybutyrate CoA transferase	DEHA2F18744p;highly similar to uniprot|P32316 Saccharomyces cerevisiae YBL015W ACH1 Acetyl-coA hydrolase;	Putative coenzyme A transferase	Coenzyme A transferase, putative	Probable coenzyme A transferase	Coenzyme A transferase	Acetyl-CoA hydrolase/transferase family protein	Probable 4-hydroxybutyrate CoA-transferase	Putative coenzyme A transferase	Succinyl-CoA:coenzyme A transferase	Succinyl-CoA: coenzyme A transferase	identified by match to protein family HMM PF02550 acetyl-CoA hydrolase/transferase family protein	Putative acyl-CoA transferase	Putative acyl-CoA transferase	Acetyl-CoA hydrolase/transferase family protein	Putative acyl-CoA transferase	Acetyl-CoA hydrolase/transferase family protein	Coenzyme A transferase	Putative coenzyme A transferase	CDS_ID OB3115 coenzyme A transferase	Coenzyme A transferase	
ECOLI02819	Uncharacterized protein yggE	Outer membrane protein	Outer membrane protein	Outer membrane protein	Putative uncharacterized protein	Putative uncharacterized protein VV2853	Periplasmic immunogenic protein	Putative uncharacterized protein STY3221	All0089 protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	Outer membrane protein	Hypothetical protein yggE	identified by match to protein family HMM PF04402 conserved hypothetical protein	similar to GB:D28593, SP:P48740, PID:439713, PID:471128, GB:D28593, SP:P48740, PID:439713, and PID:471128; identified by sequence similarity; putative immunoreactive 28 kDa outer membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	hypothetical conserved protein	26 kDa periplasmic immunogenic protein precursor	Putative uncharacterized protein VP2594	Uncharacterized protein yggE	Putative periplasmic immunogenic protein	hypothetical protein	Lipoprotein, putative	
ECOLI02820	Arginine exporter protein argO	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Probable transporter	Lysine efflux permease	Arginine exporter protein argO	LysE/yggA family protein	Conserved hypothetical membrane protein	Lysine exporter protein	Transporter, LysE family	Transporter, LysE family	Putative transport-related membrane protein	putative Lysine efflux permease	Arginine exporter protein argO	identified by match to protein family HMM PF01810 lysE/yggA family protein	L-lysine exporter, putative	LysE/YggA family protein	Probable transporter	Probable transporter	L-lysine exporter, putative	Arginine exporter protein argO	Putative uncharacterized protein	Transporter, LysE family	Probable transporter	Conserved hypothetical integral membrane protein	Putative transporter	LysE family protein	LysE/YggA family protein	
ECOLI02821	Small-conductance mechanosensitive channel	Putative mechanosensitive ion channel	Putative uncharacterized protein	Small conductance mechanosensitive ion channel	Putative uncharacterized protein	Uncharacterized mscS family protein slr0639	Putative uncharacterized protein PH0336	Uncharacterized mscS family protein aq_812	Putative mechanosensitive ion channel	Putative uncharacterized protein PF0816	Putative uncharacterized protein	Putative uncharacterized protein	Small-conductance mechanosensitive channel	Putative uncharacterized protein	Putative membrane protein	Conserved hypothetical membrane protein	conserved hypothetical protein	Putative uncharacterized protein BB0453	Hypothetical protein yggB	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative mechanosensitive ion channel	Putative uncharacterized protein	glimmer prediction; highly similar at N-terminus to hypothetical protein [Sinorhizobium meliloti strain CXM1-105] ACCESSION CAB38104 conserved hypothetical protein	Uncharacterized mscS family protein BUsg_437	Putative membrane protein	Putative uncharacterized protein	
ECOLI02822	Fructose-bisphosphate aldolase class 2	fructose-bisphosphate aldolase;	Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis; catalyzes conversion of fructose 1,6 bisphosphate to glyceraldehyde-3-P and dihydroxyacetone-P; locates to mitochondrial outer surface upon oxidative stress. [Source:SGD;Acc:S000001543]	similar to sp|P14540 Saccharomyces cerevisiae YKL060c FBA1 fructose-bisphosphate aldolase, start by similarity	Fructose-bisphosphate aldolase [Source:GeneDB_Spombe;Acc:SPBC19C2.07]	gi|21616049|emb|CAC29023.2 Kluyveromyces lactis FBAI, start by similarity	Fructose-bisphosphate aldolase	highly similar to uniprot|P14540 Saccharomyces cerevisiae YKL060c FBA1 fructose-bisphosphate aldolase;	DEHA2D17798p;highly similar to uniprot|P14540 Saccharomyces cerevisiae YKL060C FBA1 Fructose 1 6-bisphosphate aldolase required for glycolysis and gluconeogenesis;	Putative fructose 1,6-bisphosphate aldolase	Fructose-bisphosphate aldolase	Fba	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	Fructose 1,6-bisphosphate aldolase	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase	putative fructose-bisphosphate aldolase, class II	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase class II	Fructose-bisphosphate aldolase, class II	go_component: cytoplasm [goid 0005737]; go_component: cytosol [goid 0005829]; go_function: fructose-bisphosphate aldolase activity [goid 0004332]; go_process: gluconeogenesis [goid 0006094]; go_process: glycolysis [goid 0006096] fructose-bisphosphate aldolase, putative	Fructose-bisphosphate aldolase class II	Fructose-bisphosphate aldolase class 2	Putative fructose 1,6-bisphosphate aldolase	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase, class II	Fructose-bisphosphate aldolase	Fructose-bisphosphate aldolase class 2	
ECOLI02823	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	PHOSPHOGLYCERATE KINASE;05_0320, PHOSPHOGLYCERATE KINASE, PGK_KLULA, gene found by Glimmer;	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	identified by match to PFAM protein family HMM PF02881 phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	Phosphoglycerate kinase	
ECOLI02824	D-erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	Probable D-erythrose 4-phosphate dehydrogenase	putative erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose 4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	Residues 29 to 367 of 367 are 100 pct identical to residues 1 to 339 of a 339 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289494.1 D-erythrose 4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	IPR000173: Glyceraldehyde 3-phosphate dehydrogenase; IPR006422: D-erythrose-4-phosphate dehydrogenase D-erythrose 4-phosphate dehydrogenase	similar to Salmonella typhi CT18 D-erythrose 4-phosphate dehydrogenase D-erythrose 4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose 4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose 4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01532 D-erythrose-4-phosphate dehydrogenase	identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01532 D-erythrose 4-phosphate dehydrogenase	identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01532 D-erythrose-4-phosphate dehydrogenase	Glyceraldehyde 3-phosphate dehydrogenase	D-erythrose-4-phosphate dehydrogenase	
ECOLI02825	Uncharacterized protein yggC	similar to wi|NCU04309.1 Neurospora crassa NCU04309.  1, start by similarity	Putative uridine kinase C227.14 [Source:GeneDB_Spombe;Acc:SPAC227.14]	Putative uncharacterized protein	Putative kinase	Hypothetical protein yggC	similar to GP:11066210, and GP:11066210; identified by sequence similarity; putative kinase-related protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	PANTOTHENATE KINASE	Putative kinase	Putative kinase	Similar to FrcK [Sinorhizobium meliloti] (kinase-like protein in fructose transporter operon)	3SC5B7.01, conserved hypothetical protein (fragment), len: >151 aa; similar to TR:Q9SA67 (EMBL:AC006550) Arabidopsis thaliana F10O3 protein, 270 aa; fasta scores: opt: 219 z-score: 240.7 E(): 7.1e-06; 30.4% identity in 125 aa overlap SCF42.33, unknown, partial CDS, len: > 117 aa. Similar to a protein of undefined function from Schizosaccharomyces pombe (Fission yeast) TR:CAB61463(EMBL:AL133156) (235 aa), fasta scores opt: 241 z-score: 282.8 E(): 2.3e-08 37.0% identity in 119 aa overlap and Escherichia coli SW:YGGC_ECOLI(EMBL:X14436) (237 aa), fasta scores opt: 184 z-score: 219.2 E(): 8.1e-05 36.4% identity in 99 aa overlap. Contains a Prosite Hit to PS00017 ATP/GTP-binding site motif A (P-loop). conserved hypothetical protein	Residues 1 to 237 of 237 are 94 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289500.1 putative kinase	Pantothenate kinase protein	similar to BR0062, kinase-related protein kinase-related protein	putative kinase	Code: H; COG: COG1072 putative kinase	Uridine kinase:ATP/GTP-binding site motif A (P-loop)	Panthothenate kinase	Code: H; COG: COG1072 putative kinase	conserved hypothetical protein	Code: H; COG: COG1072 putative kinase	conserved hypothetical protein similarity:fasta; with=UniProt:Q8UJ72 (EMBL:AE007949); Agrobacterium tumefaciens (strain C58/ATCC 33970).; frcK; Pantothenate kinase (AGR_C_100p).; length=209; id 63.285; 207 aa overlap; query 1-207; subject 1-207	phosphoribulokinase/uridine kinase	conserved hypothetical protein KEGG: sme:SMc02167 hypothetical protein, ev=5e-46, 47% identity	pantothenate kinase protein similar to FrcK [Sinorhizobium meliloti] and AGR_C_100p [Agrobacterium tumefaciens] Similar to entrez-protein:AAG28501.1 Putative location:bacterial cytoplasm Psort-Score: 0.0625	Putative uncharacterized protein	
ECOLI02826	Uncharacterized protein yggD	Putative transcriptional regulator	Putative transcriptional regulator	Residues 1 to 169 of 169 are 97 pct identical to residues 1 to 169 of a 169 aa protein from Escherichia coli K12 ref: NP_417404.1 putative transcriptional regulator	transcriptional regulator	Code: K; COG: COG3722 putative transcriptional regulator	Code: K; COG: COG3722 putative transcriptional regulator	Putative uncharacterized protein	Putative transcriptional regulator	putative transcriptional regulator Code: K; COG: COG3722	putative transcriptional regulator	Putative uncharacterized protein	Mannitol repressor	Predicted DNA-binding transcriptional regulator	Mannitol operon repressor	Mannitol repressor, MtlR	Mannitol operon repressor	Putative uncharacterized protein	Mannitol operon repressor	Mannitol operon repressor	Transcriptional regulator	Mannitol operon repressor	Mannitol operon repressor	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	
ECOLI02827	Uncharacterized protein yggF	Putative uncharacterized protein yggF	Residues 1 to 258 of 258 are 99 pct identical to residues 64 to 321 of a 321 aa protein from Escherichia coli K12 ref: NP_417405.1 orf, conserved hypothetical protein	fructose-1,6-bisphosphatase	Code: G; COG: COG1494 conserved hypothetical protein	conserved hypothetical protein Code: G; COG: COG1494	Putative uncharacterized protein	Fructose-1,6-bisphosphatase, class II	Predicted hexoseP phosphatase	Fructose-1,6-bisphosphatase, class II	Fructose-1,6-bisphosphatase, class II	Fructose-1,6-bisphosphatase, class II	Putative uncharacterized protein	Fructose-1,6-bisphosphatase, class II	Fructose-1,6-bisphosphatase, class II	Fructose-1,6-bisphosphatase, class II	Putative uncharacterized protein	Putative hexoseP phosphatase	Putative hexoseP phosphatase	Putative hexoseP phosphatase	Predicted hexose P phosphatase	Putative hexoseP phosphatase	YggF protein	Predicted hexoseP phosphatase	Predicted hexoseP phosphatase	predicted hexoseP phosphatase	Fructose-1,6-bisphosphatase, class II	
ECOLI02828	Uncharacterized protein yggP	Putative oxidoreductase	Putative oxidoreductase	Residues 7 to 413 of 413 are 99 pct identical to residues 19 to 425 of a 425 aa protein YGGP_ECOLI sp: P52048 orf, conserved hypothetical protein	L-sorbose 1-phosphate reductase	Code: ER; COG: COG1063 putative L-sorbose-1-P-reductase	Code: ER; COG: COG1063 putative oxidoreductase	Code: ER; COG: COG1063 putative oxidoreductase	Putative uncharacterized protein	Putative oxidoreductase	putative oxidoreductase Code: ER; COG: COG1063	putative oxidoreductase	Alcohol dehydrogenase, zinc-binding domain protein	Alcohol dehydrogenase, zinc-binding domain protein	Putative uncharacterized protein	L-sorbose 1-phosphate reductase	Predicted dehydrogenase	Alcohol dehydrogenase, zinc-binding domain protein	L-sorbose 1-phosphate reductase	Alcohol dehydrogenase zinc-binding domain protein	L-sorbose 1-phosphate reductase	Putative uncharacterized protein	Alcohol dehydrogenase zinc-binding domain protein	L-sorbose 1-phosphate reductase	L-sorbose 1-phosphate reductase	L-sorbose 1-phosphate reductase	L-sorbose 1-phosphate reductase	L-sorbose 1-phosphate reductase	Putative oxidoreductase	
ECOLI02829	PTS system mannitol-specific cryptic EIICB component	PTS system, mannitol (Cryptic)-specific IIBC component	PTS system, mannitol-specific IIABC component	Mannitol-specific PTS system enzyme II component	PTS system mannitol-specific cryptic EIICB component	PTS SYSTEM, MANNITOL-SPECIFIC IIABC COMPONENT	PTS system, mannitol-specific IIBC component	Code: G; COG: COG2213 PTS system mannitol-specific enzyme II component, cryptic	Code: G; COG: COG2213 PTS system, mannitol-specific enzyme II component, cryptic	PTS system, mannitol (Cryptic)-specific IIBC component	PTS system, mannitol (Cryptic)-specific IIBC component	PTS system, mannitol (cryptic)-specific IIBC component	PTS system, mannitol-specific IIC subunit	Putative uncharacterized protein	PTS system, mannitol-specific cryptic EIICB component	Protein-N(Pi)-phosphohistidine--sugar phosphotransferase	PTS system, mannitol-specific cryptic EIICB component, truncation	PTS system, mannitol-specific IIC subunit	PTS system, mannitol-specific IIC subunit	Putative uncharacterized protein	PTS system, mannitol-specific cryptic EIICB component	Pts system mannitol-specific eiicba component	Pts system mannitol-specific eiicba component	Pts system mannitol-specific eiicba component	PTS system, mannitol-specific EIICB component	PTS system, mannitol-specific cryptic EIICB component	PTS system mannitol-specific IIBC components	Fused mannitol-specific PTS enzymes: IIB component ; IIC component	Fused mannitol-specific PTS enzymes: IIB component ; IIC component	
ECOLI02830	Mannitol-specific cryptic phosphotransferase enzyme IIA component	PTS system, IIA component	PTS system, mannitol (Cryptic)-specific IIA component	identified by match to protein family HMM PF00359 conserved hypothetical protein	Mannitol-specific cryptic phosphotransferase enzyme IIA component	Putative uncharacterized protein	hypothetical protein, similar to PTS fructose-specific enzyme IIBC component	Ortholog of S. aureus MRSA252 (BX571856) SAR0328 putative PTS transport system IIA component	hypothetical protein, similar to PTS fructose-specific enzyme IIBC component	Similar to Escherichia coli cryptic mannitol PTS transport system protein CmtB SW:PTYA_ECOLI (P32058) (147 aa) fasta scores: E(): 4.1e-14, 35.714% id in 140 aa, and to Escherichia coli unknown pentitol phosphotransferase enzyme IIA component SgaA SW:PTXA_ECOLI (P39303) (154 aa) fasta scores: E(): 1.6e-10, 27.273% id in 143 aa putative PTS transport system IIA component	Code: GT; COG: COG1762 PTS system, mannitol-specific enzyme II component, cryptic	identified by match to protein family HMM PF00359 PTS system, IIA component	similar to gi|57286362|gb|AAW38456.1| [Staphylococcus aureus subsp. aureus COL], percent identity 86 in 144 aa, BLASTP E(): 3e-64 phosphotransferase system mannitol-specific IIA domain	Code: GT; COG: COG1762 PTS system mannitol-specific enzyme II component, cryptic	PTS system, IIA component identified by match to protein family HMM PF00359	probable PTS system component	Code: GT; COG: COG1762 PTS system, mannitol-specific enzyme II component, cryptic	PTS system, mannitol (Cryptic)-specific IIA component	conserved hypothetical protein	PTS system, mannitol-specific enzyme II component, cryptic	Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)	Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)	PTS system, mannitol-specific enzyme II component, cryptic	Putative uncharacterized protein	Putative PTS IIA-like nitrogen-regulatory protein PtsN	Putative uncharacterized protein	Mannitol-specific cryptic phosphotransferase enzyme IIA component	phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 KEGG: sav:SAV0331 putative PTS system enzyme IIA component	putative PTS IIA-like nitrogen-regulatory protein PtsN PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	
ECOLI02831	Transketolase 1	transketolase;	Transketolase 1	Transketolase 1	Transketolase	Transketolase	Transketolase	Transketolase	Transketolase	Transketolase	Transketolase 1	Transketolase 1	Transketolase	Transketolase 1	Transketolase 1	go_component: cytoplasm [goid 0005737]; go_function: transketolase activity [goid 0004802]; go_process: pentose-phosphate shunt [goid 0006098] conserved hypothetical protein	Transketolase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology PROBABLE TRANSKETOLASE PROTEIN	Transketolase	Transketolase 1	Transketolase	Transketolase	Transketolase	Transketolase	Transketolase 1 isozyme	similar to AX065121-1|CAC25800.1| percent identity: 86 in 699 aa transketolase	Transketolase	Residues 11 to 673 of 673 are 99 pct identical to residues 1 to 663 of a 663 aa protein from Escherichia coli O157:H7 ref: NP_311837.1 transketolase 1 isozyme	Transketolase 1	
ECOLI02832	Uncharacterized metalloprotease yggG	Slr1971 protein	Putative uncharacterized protein	Putative uncharacterized protein STY3237	All4371 protein	Putative metalloprotease yggG	Putative peptidase	Putative uncharacterized protein yggG	Residues 1 to 325 of 325 are 98 pct identical to residues 5 to 329 of a 329 aa protein from Escherichia coli pir: A42604 orf, conserved hypothetical protein	Putative lipoprotein	hypothetical protein	Putative uncharacterized protein	IPR001915: Peptidase M48 putative Zn-dependent proteases with possible chaperone function	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative conserved lipoprotein. 	Hypothetical protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative Zn-dependent protease with chaperone function	Putative Zn-dependent proteases with possible chaperone function	Code: O; COG: COG0501 conserved hypothetical protein	Code: O; COG: COG0501 conserved hypothetical protein	Peptidase M48, Ste24p	peptidase, M48B family identified by match to protein family HMM PF01435	Peptidase M48, Ste24p	Code: O; COG: COG0501; orf conserved hypothetical protein	Putative metalloprotease YggG	Peptidase M48, Ste24p precursor	Peptidase M48, Ste24p precursor	Putative lipoprotein precursor	Peptidase, M48 family	
ECOLI02833	Agmatinase	similar to tr|Q96U86 Neurospora crassa B13A5.050 and KLLA0F04235g Kluyveromyces lactis, hypothetical start	similar to ca|CA3758|IPF8889 Candida albicans putative arginase (by homology), start by similarity	Hypothetical protein	Putative agmatinase	Agmatinase	SpeE	Agmatinase	Agmatinase	Agmatinase	Related to agmatinase	Agmatinase	Agmatinase	similar to GB:D13639, GB:M88080, GB:M88081, GB:M88082, GB:M88083, GB:M90813, GB:X68452, SP:P30279, PID:180000, PID:180010, PID:285991, and PID:38416; identified by sequence similarity; putative agmatinase, putative	Agmatinase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by FrameD PROBABLE AGMATINASE PROTEIN	AGMATINASE	Agmatinase	Agmatinase	agmatinase	Agmatinase	Residues 1 to 306 of 306 are 100 pct identical to residues 1 to 306 of a 306 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289508.1 agmatinase	Arginase family	Agmatinase	identified by similarity to SP:P16936; match to protein family HMM PF00491; match to protein family HMM TIGR01230 agmatinase	Agmatinase	Agmatinase	Agmatinase	IPR005925: Putative agmatinase; IPR006035: Arginase/agmatinase/formiminoglutamase agmatinase	
ECOLI02834	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Arginine decarboxylase	Biosynthetic arginine decarboxylase	Arginine decarboxylase	Biosynthetic arginine decarboxylase	Biosynthetic arginine decarboxylase	Arginine decarboxylase	PMID: 2198270 best DB hits: BLAST: pir:S76771; arginine decarboxylase (EC 4.1.1.19) 2 - Synechocystis; E=1e-143 pir:S74435; arginine decarboxylase (EC 4.1.1.19) 1 - Synechocystis; E=1e-135 pir:E82414; biosynthetic arginine decarboxylase VCA0815 [imported] -; E=1e-125 COG: slr0662; COG1166 Arginine decarboxylase (spermidine biosynthesis); E=1e-144 aq_728; COG0019 Diaminopimelate decarboxylase; E=3e-05 PFAM: PF02784; Pyridoxal-dependent decarboxy; E=3.9e-56 PF00278; Pyridoxal-dependent decarboxy; E=1.7e-30 arginine decarboxylase	Biosynthetic arginine decarboxylase	Arginine decarboxylase	Arginine decarboxylase	arginine decarboxylase	Biosynthetic arginine decarboxylase	
ECOLI02837	Uncharacterized protein yqgD	Putative uncharacterized protein yqgD	putative inner membrane protein	Putative inner membrane protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yqgD	conserved hypothetical protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	Putative inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein yqgD	Putative uncharacterized protein yqgD	Putative uncharacterized protein yqgD	Predicted inner membrane protein	Putative uncharacterized protein yqgD	Putative inner membrane protein	YqgD protein	Predicted inner membrane protein	Predicted inner membrane protein	predicted inner membrane protein	Putative uncharacterized protein	
ECOLI02838	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase;	highly similar to tr|Q9P842 Candida albicans S-adenosylmethionine synthetase 2 (EC 2.5.1.6), hypothetical start	S-adenosylmethionine synthetase [Source:GeneDB_Spombe;Acc:SPBC14F5.05c]	highly similar to sp|P19358 Saccharomyces cerevisiae YDR502c SAM2 S-adenosylmethionine synthetase 2, start by similarity	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	highly similar to uniprot|P19358 Saccharomyces cerevisiae YDR502c SAM2 S-adenosylmethionine synthetase 2 or uniprot|P10659 Saccharomyces cerevisiae YLR180w SAM1;	DEHA2E14212p;highly similar to uniprot|P19358 Saccharomyces cerevisiae YDR502C SAM2 S-adenosylmethionine synthetase catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine;	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase	
ECOLI02839	Galactose-proton symporter	Galactose-proton symport	Putative multidrug resistance protein	Multidrug resistance protein	Galactose-proton symporter	go_component: membrane [goid 0016020]; go_function: myo-inositol transporter activity [goid 0005365]; go_process: myo-inositol transport [goid 0015798] myo-inositol transporter 1, putative	Galactose-proton symport of transport system	Residues 5 to 468 of 468 are 99 pct identical to residues 1 to 464 of a 464 aa protein from Escherichia coli K12 ref: NP_417418.1 galactose-proton symport of transport system	similar to sugar transport protein hypothetical protein	similar to sugar transport protein hypothetical protein	IPR003663: Sugar transporter; IPR005828: General substrate transporter; IPR005829: Sugar transporter superfamily;IPR007114: Major facilitator superfamily MFS family, galactose:proton symporter	similar to Salmonella typhi CT18 galactose-proton symport (galactose transporter) galactose-proton symport (galactose transporter)	MFS family galactose:proton symporter	identified by match to protein family HMM PF00083; match to protein family HMM PF07690 major facilitator family transporter, putative	Code: GEPR; COG: COG0477 galactose-proton symport of transport system	Code: GEPR; COG: COG0477 galactose-proton symport of transport system	Code: GEPR; COG: COG0477 galactose-proton symport of transport system	Galactose-proton symporter	Sugar-proton symporter	Glutamate synthase, NADH/NADPH, small subunit 2	Galactose-proton symporter	transcript_id=ENSMLUT00000008192	galactose-proton symport of transport system Code: GEPR; COG: COG0477	D-galactose transporter	Sugar transporter precursor	Galactose-proton symport of transport system	Putative uncharacterized protein	Galactose-proton symporter	Sugar transporter	
ECOLI02840	Protein sprT	Protein sprT	Protein sprT	Protein sprT	Protein sprT	conserved hypothetical protein	Protein sprT	Protein sprT	Protein sprT	Protein sprT	Protein sprT	Protein sprT	Protein sprT	Protein sprT	Residues 1 to 165 of 165 are 98 pct identical to residues 1 to 165 of a 165 aa protein from Escherichia coli K12 ref: NP_417419.1 orf, conserved hypothetical protein	Protein sprT	Protein sprT	IPR005622: Putative metallopeptidase (SprT family); IPR006025: Neutral zinc metallopeptidases, zinc-binding site; IPR006640: SprT putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Protein sprT	SprT protein	Similar to: HI1173, SPRT_HAEIN SprT	Uncharacterized BCR SprT protein	Protein sprT	Protein sprT	probable SprT protein	identified by match to protein family HMM PF03926 peptidase, SprT family	identified by match to protein family HMM PF03926 peptidase, SprT family	Protein of unknown function DUF335	
ECOLI02841	Endonuclease-1	Endonuclease I	Endonuclease I	putative extracellular deoxyribonucleaseprecursor	Endonuclease I	Extracellular deoxyribonuclease	Putative exported endonulease	Putative exported endonulease	Endonuclease I	Endonuclease	Endonuclease I	Putative exported endonulease	Extracellular deoxyribonuclease	DNA-specific endonuclease I	Endonuclease-1	Endonuclease I	Residues 2 to 236 of 236 are 99 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli K12 ref: NP_417420.1 DNA-specific endonuclease I	Endonuclease I	Deoxyribonuclease I	IPR007346: Endonuclease I DNA-specific endonuclease I	similar to Salmonella typhi CT18 endonuclease I endonuclease I	Putative endonuclease I. 	endonuclease I	Endonuclease-1	DNA-specific endonuclease I	identified by match to protein family HMM PF04231 endonuclease I	identified by similarity to SP:P25736; match to protein family HMM PF04231 endonuclease I	Deoxyribonuclease I	Code: L; COG: COG2356 DNA-specific endonuclease I	
ECOLI02842	Ribosomal RNA small subunit methyltransferase E	Hypothetical cytosolic protein	Putative uncharacterized protein	Putative uncharacterized protein	Ribosomal RNA small subunit methyltransferase E	Putative uncharacterized protein	Ribosomal RNA small subunit methyltransferase E	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein sdrD	Ribosomal RNA small subunit methyltransferase E	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE2026	Putative uncharacterized protein	Putative uncharacterized protein	Ribosomal RNA small subunit methyltransferase E	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV2867	Putative uncharacterized protein	Hypothetical conserved protein	Putative uncharacterized protein	Putative uncharacterized protein STY3247	Alr1349 protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02843	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	putative glutathione synthetase	Glutathione synthetase	identified by match to TIGR protein family HMM TIGR00768 glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLUTATHIONE SYNTHETASE PROTEIN	Glutathione synthetase	Glutathione synthetase	Glutathione synthetase	glutathione synthetase	Glutathione synthetase	
ECOLI02844	UPF0301 protein yqgE	UPF0301 protein PD_1276	UPF0301 protein XCC2748	UPF0301 protein HI0304	similar to GP:5817606; identified by sequence similarity; putative transcriptional regulator, putative	UPF0301 protein BT_1078	UPF0301 protein CT0663	UPF0301 protein CC_3395	UPF0301 protein NMB1336	UPF0301 protein PM1869	UPF0301 protein algH	UPF0301 protein VV2869	Putative uncharacterized protein	UPF0301 protein Atu0781	UPF0301 protein yqgE	UPF0301 protein DP2218	UPF0301 protein ML0028	UPF0301 protein BF2056	UPF0301 protein BPSL2693	conserved hypothetical protein	UPF0301 protein CPn_0139/CP_0633/CPj0139/CpB0140	UPF0301 protein yqgE	identified by match to PFAM protein family HMM PF02622 conserved hypothetical protein	UPF0301 protein CCA_00630	UPF0301 protein VC_0467	UPF0301 protein BP0319	UPF0301 protein BB4405	UPF0301 protein SO_3346	UPF0301 protein ECA3925	
ECOLI02845	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	Putative Holliday junction resolvase	conserved hypothetical protein	Putative Holliday junction resolvase	identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250 conserved hypothetical protein TIGR00250	similar to GP:15156369, and GP:15074241; identified by sequence similarity; putative conserved hypothetical protein TIGR00250	Putative Holliday junction resolvase	Putative Holliday junction resolvase	
ECOLI02846	Uncharacterized protein yggR	Twitching motility protein	Twitching motility protein	Twitching motility protein	Twitching motility protein	Twitching motility protein PilT	Twitching mobility protein	Twitching motility protein PilT	Twitching mobility protein	Pili retraction protein pilT	Type II secretion, ATP-binding, protein	Twitching motility protein	Probable twitching mobility protein	putative twitching motility protein PilT	Twitching motility protein	Hypothetical protein yggR	Twitching motility protein PilT	Twitching motility protein PilT	Twitching mobility protein	Twitching motility protein PilT	Putative type II/IV secretion system protein	PMID: 1676385 best DB hits: BLAST: pir:C70365; twitching motility protein PilT - Aquifex aeolicus; E=7e-81 pir:B75333; twitching mobility protein - Deinococcus radiodurans; E=9e-81 embl:CAB56295.1; (AJ249385) twitching motility protein; E=2e-77 COG: aq_745; COG2805 Predicted ATPases involved in pili biogenesis, PilT; E=6e-82 TM0837; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=4e-27 PFAM: PF00437; Bacterial type II secretion syst; E=0.18 PF02283; Cobinamide kinase / cobinamide p; E=0.86 PF00437; Bacterial type II secretion syst; E=1.5e-51 twitching mobility protein PilT	Twitching motility protein	TWITCHING MOTILITY PROTEIN	twitching motility protein	twitching motility protein	Twitching motility protein PilT	Putative uncharacterized protein yggR	PilT ATPase involved in pili biogenesis	
ECOLI02847	UPF0001 protein yggS	hypothetical protein;similar to single-domain racemase;	Single-domain racemase, possibly non-specific due to the lack of the second domain, which presumably determines specificity; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS.  [Source:SGD;Acc:S000000132]	Bll0623 protein	similar to sp|P38197 Saccharomyces cerevisiae YBL036c singleton, start by similarity	Proline synthetase associated protein	UPF0001 protein slr0556	Putative uncharacterized protein	UPF0001 protein HI0090	DEHA2F25762p;similar to uniprot|P38197 Saccharomyces cerevisiae YBL036C Single-domain racemase;	Putative racemase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE1854	Putative uncharacterized protein	Putative uncharacterized protein	UPF0001 protein PM0112	UPF0001 protein PA0394	Putative uncharacterized protein	Predicted enzyme with a TIM-barrel fold	UPF0001 protein DR_1368	Putative uncharacterized protein	Putative uncharacterized protein STY3253	Alr0486 protein	Putative uncharacterized protein	Lmo2031 protein	
ECOLI02848	Uncharacterized protein yggT	Putative uncharacterized protein	Uncharacterized protein PA0392	Predicted integral membrane protein	Putative membrane protein	Putative membrane protein	Hypothetical protein yggT	Putative uncharacterized protein	Putative integral membrane protein	Putative integral membrane protein	Putative uncharacterized protein	Putative membrane protein	YGGT family protein	Putative integral membrane protein	Membrane protein, putative	FkuB	Uncharacterized protein yggT	Integral membrane protein	Predicted integral membrane protein	Residues 1 to 188 of 188 are 97 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289524.1 putative resistance protein	Putative membrane protein	YGGT family	Probable transmembrane protein	Similar to putative resistance protein YggT of Escherichia coli	Predicted integral membrane protein hypothetical protein	conserved gene hypothetical, YGGT family protein	Predicted integral membrane protein hypothetical protein	Putative uncharacterized protein	IPR003425: Protein of unknown function YGGT putative integral membran resistance protein	
ECOLI02849	UPF0235 protein yggU	UPF0235 protein CT1832	UPF0235 protein PF1765	UPF0235 protein PM1313	UPF0235 protein VV2877	UPF0235 protein yggU	Putative uncharacterized protein	conserved hypothetical protein	UPF0235 protein CPn_0497/CP_0257/CPj0497/CpB0517	Putative uncharacterized protein	UPF0235 protein yggU	UPF0235 protein VC_0458	UPF0235 protein SO_3356	UPF0235 protein ECA3630	PMID: 20150255 best DB hits: BLAST: pir:H72072; conserved hypothetical protein CP0257 [imported] -; E=2e-10 pir:F81677; conserved hypothetical protein TC0667 [imported] -; E=4e-10 pir:B71520; hypothetical protein CT388 - Chlamydia trachomatis; E=6e-10 COG: CPn0497; COG1872 Uncharacterized ACR; E=2e-11 PFAM: PF02594; Uncharacterized ACR, YggU family COG; E=4.7e-22 conserved hypothetical protein	hypothetical protein	UPF0235 protein VP2619	UPF0235 protein yggU	Putative uncharacterized protein	UPF0235 protein VV1_1522	Residues 1 to 100 of 100 are 98 pct identical to residues 1 to 100 of a 100 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289525.1 orf, conserved hypothetical protein	UPF0235 protein YPO0944/y3330/YP_3498	UPF0235 protein NE0395	hypothetical protein, conserved, YggU family	Similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	Similar to conserved hypothetical protein hypothetical protein	identified by similarity to SP:Q9Z854; match to protein family HMM PF02594 conserved hypothetical protein	IPR003746: Protein of unknown function DUF167; IPR005228: Conserved hypothetical protein 251 putative cytoplasmic protein	
ECOLI02850	Nucleoside-triphosphatase rdgB	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	HAM1 protein homolog	Nucleoside-triphosphatase	Putative uncharacterized protein PH1917	Putative uncharacterized protein TVG1341378	identified by match to TIGR protein family HMM TIGR00042 hypothetical protein	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Nucleoside-triphosphatase	HAM1 protein related	Nucleotide triphosphatase	Xanthosine triphosphate pyrophosphatase	HAM1 protein homolog	Nucleoside-triphosphatase	Nucleoside-triphosphatase	Ham1 family protein, putative	
ECOLI02851	Oxygen-independent coproporphyrinogen III oxidase -like protein yggW	Oxygen-independent coproporphyrinogen III oxidase, putative	Coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen-III oxidase -like protein sll1917	Oxidoreductase	Oxygen-independent coproporphyrinogen-III oxidase -like protein HI0463	identified by match to PFAM protein family HMM PF03127 oxygen-independent coproporphyrinogen III oxidase HemN, putative	Coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase, putative	Putative oxygen-independent coproporphyrinogen III oxidase	Possible oxygen independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Probable coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase, putative	Oxygen-independent coproporphyrinogen III oxidase, putative	Probable oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coprophorphyrinogen III oxidase family protein	Putative uncharacterized protein	Probable oxidase	Putative oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase, putative	Coproporphyrinogen III oxidase	Coproporphyrinogen III oxidase, putative	Oxygen-independent coproporphyrinogen III oxidase	Coproporphyrinogen oxidase, anaerobic	Oxygen-independent coproporphyrinogen III oxidase	Possible oxygen-independent coproporphyrinogen III oxidase	Coproporphyrinogen III oxidase	Coproporphyrinogen dehydrogenase	
ECOLI02852	Uncharacterized protein yggM	Hypothetical protein yggM	Putative alpha helix chain	Residues 1 to 308 of 308 are 99 pct identical to residues 13 to 320 of a 335 aa protein from Escherichia coli K12 ref: NP_417431.1 putative alpha helix chain	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative periplasmic protein	putative alpha helix chain	putative alpha helix chain	Putative uncharacterized protein	Putative uncharacterized protein yggM	putative alpha helix chain	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative periplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein yggM	Putative periplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	
ECOLI02853	L-asparaginase 2	L-asparaginase I;	Bll4950 protein	Probable L-asparaginase periplasmic	DEHA2G05918p;similar to uniprot|P38986 Saccharomyces cerevisiae YDR321W ASP1 Cytosolic L-asparaginase;	L-asparaginase II	Putative L-asparaginase	Glutaminase-asparaginase	Cytoplasmic L-asparaginase	L-asparaginase	Related to L-asparaginase	Lmo1940 protein	Probable L-asparaginase	L-asparaginase II	L-asparaginase	putative periplasmic L-asparaginase II	L-asparaginase II	identified by match to TIGR protein family HMM TIGR00519 asparaginase family protein	L-asparaginase	Probable L-asparaginase	L-asparaginase (L-asparagine amidohydrolase)	L-ASPARAGINASE II	Periplasmic L-asparaginase II	Periplasmic L-asparaginase II	CDS_ID OB1808 L-asparaginase	similar to AL646063-159|CAD15008.1| percent identity: 35 in 335 aa putative L-asparaginase	Lin2054 protein	Residues 1 to 348 of 348 are 99 pct identical to residues 1 to 348 of a 348 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289529.1 periplasmic L-asparaginase II	Putative L-asparaginase II	
ECOLI02854	Uncharacterized protein yggN	Hypothetical protein yggN	Putative exported protein	Uncharacterized protein yggN	Residues 1 to 239 of 239 are 99 pct identical to residues 1 to 239 of a 239 aa protein from Escherichia coli O157:H7 ref: NP_311861.1 orf, conserved hypothetical protein	Similar to unknown protein YggN of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yggN	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative periplasmic protein precursor	Putative uncharacterized protein yggN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	Putative uncharacterized protein	
ECOLI02855	Uncharacterized protein yggL	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VVA1293	Putative uncharacterized protein STY3263	Hypothetical protein yggL	Putative uncharacterized protein	Putative DNA-binding protein	Putative uncharacterized protein	Putative uncharacterized protein VPA0178	Putative uncharacterized protein yggL	Uncharacterized protein conserved in bacteria	Residues 1 to 118 of 118 are 98 pct identical to residues 1 to 118 of a 118 aa protein from Escherichia coli K12 ref: NP_417434.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YggL of Escherichia coli	IPR007416: Protein with unknown function DUF469 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Similar to: HI0341, YGGL_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	identified by similarity to OMNI:NTL02EC3797; match to protein family HMM PF04320 conserved hypothetical protein	conserved hypothetical protein	identified by similarity to GB:AAN67713.1; match to protein family HMM PF04320 conserved hypothetical protein	identified by match to protein family HMM PF04320 Protein with unknown function (DUF469) superfamily	Protein with unknown function DUF469	Code: S; COG: COG3171 conserved hypothetical protein	
ECOLI02856	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	similarity to HYPOTHETICAL METHYLTRANSFERASE-LIKE PROTEIN YGGH_ECOLI;11_1520, similarity to HYPOTHETICAL METHYLTRANSFERASE-LIKE PROTEIN YGGH_ECOLI, gene found by Glimmer;	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	putative S-adenosylmethionine-dependent methyltransferase	tRNA (guanine-N(7)-)-methyltransferase	identified by match to protein family HMM PF02390; match to protein family HMM TIGR00091 methyltransferase, putative	
ECOLI02857	A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	similar to GB:M63959, GB:U06976, SP:P30533, PID:1235526, PID:177874,  and PID:463882; identified by sequence similarity; putative A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	Putative A/G-specific adenine glycosylase	Putative adenine glycosylase	A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	MutY	A , G specific adenine glycosylase	A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	A/G-specific DNA glycosylase	A/G-specific adenine DNA glycosylase	A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	A/G-specific adenine glycosylase	Related to A/G-specific adenine glycosylase	Lmo1689 protein	Probable DNA glycosylase	A/G-specific adenine glycosylase	A/G-specific adenine DNA glycosylase	A/G-specific adenine glycosylase	Putative A/G-specific adenine glycosylase	putative A/G-specific adenine glycosylase	
ECOLI02858	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	conserved hypothetical protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Residues 1 to 91 of 91 are 100 pct identical to residues 1 to 91 of a 91 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289534.1 orf, conserved hypothetical protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	Probable Fe(2+)-trafficking protein	
ECOLI02859	Membrane-bound lytic murein transglycosylase C	Membrane-bound lytic murein transglycosylase C	Soluble lytic murein transglycosylase	Membrane-bound lytic murein transglycosylase C	putative membrane-bound lytic mureintransglycosylase C	Membrane-bound lytic murein transglycosylase C precursor	Membrane-bound lytic murein transglycosylase C	Membrane-bound lytic murein transglycosylase C	MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE C ,	Membrane-bound lytic murein transglycosylase C	Membrane-bound lytic murein transglycosylase C	Soluble lytic murein transglycosylase	Residues 1 to 360 of 360 are 99 pct identical to residues 1 to 360 of a 360 aa protein from Escherichia coli K12 ref: NP_417438.1 membrane-bound lytic murein transglycosylase C	Membrane-bound lytic murein transglycosylase C	MltC protein	Membrane-bound lytic murein transglycosylase C	IPR000189: Prokaryotic transglycosylase, active site; IPR008258: SLT domain membrane-bound lytic murein transglycosylase C	similar to Salmonella typhi CT18 membrane-bound lytic murein transglycosylase C membrane-bound lytic murein transglycosylase C	Membrane-bound lytic murein transglycosylase C	Membrane-bound lytic murein transglycosylase C	membrane-bound lytic murein transglycosylase C precursor	Murein hydrolase C; Similar to: HI0761, MLTC_HAEIN membrane-bound lytic murein transglycosylase C precursor	Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) MltE protein	Membrane-bound lytic murein transglycosylase C	Membrane-bound lytic murein transglycosylase C	membrane-bound lytic murein transglycosylase C	Code: M; COG: COG0741 membrane-bound lytic murein transglycosylase C	Code: M; COG: COG0741 membrane-bound lytic murein transglycosylase C	membrane-bound lytic murein transglycosylase C	
ECOLI02860	Nucleoside permease nupG	Nucleoside permease	Nucleoside permease nupG	Transport of nucleosides, permease protein	Residues 1 to 434 of 434 are 100 pct identical to residues 1 to 434 of a 434 aa protein from Escherichia coli O157:H7 ref: NP_311867.1 transport of nucleosides, permease protein	IPR004740: Nucleoside:H+ symporter; IPR007114: Major facilitator superfamily MFS family, nucleoside transport	similar to Salmonella typhi CT18 nucleoside permease nucleoside permease	MFS family nucleoside transport	Code: GEPR; COG: COG0477 transport of nucleosides, permease protein	transport of nucleosides, permease protein; Code: GEPR; COG: COG0477 NupG	permease protein; Code: GEPR; COG: COG0477 transport of nucleosides	Nucleoside permease NupG	Transport of nucleosides, permease protein	Nucleoside permease nupG Code: GEPR; COG: COG0477	transport of nucleosides, permease protein	Major facilitator superfamily MFS_1	Nucleoside transporter	Nucleoside transport protein	Putative uncharacterized protein	Nucleoside permease NupG	Nucleoside permease NupG	Nucleoside transporter	Nucleoside permease NupG	Putative uncharacterized protein	Putative uncharacterized protein	Nucleoside permease NupG	Nucleoside permease	Nucleoside permease NupG	Nucleoside permease NupG	
ECOLI02861	Ornithine decarboxylase, constitutive	SpeF	Ornithine decarboxylase, constitutive	Ornithine decarboxylase, inducible	Ornithine decarboxylase, inducible	Ornithine decarboxylase, constitutive	Ornithine decarboxylase isozyme	Residues 1 to 711 of 711 are 98 pct identical to residues 21 to 731 of a 731 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289537.1 ornithine decarboxylase isozyme	Ornithine decarboxylase	IPR000310: Orn/Lys/Arg decarboxylase, major region; IPR005308: Orn/Lys/Arg decarboxylase, N-terminal domain; IPR008286: Orn/Lys/Arg decarboxylase, C-terminal ornithine decarboxylase isozyme	similar to Salmonella typhimurium ornithine decarboxylase isozyme ornithine decarboxylase isozyme	Ornithine decarboxylase	Ornithine decarboxylase	Code: E; COG: COG1982 ornithine decarboxylase isozyme	Code: E; COG: COG1982 ornithine decarboxylase isozyme	Ornithine decarboxylase, constitutive	Ornithine decarboxylase	Ornithine decarboxylase	Ornithine decarboxylase, constitutive	Arginine/lysine/ornithine decarboxylase	Ornithine decarboxylase	Orn/Lys/Arg decarboxylase, major region PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein KEGG: son:SO0314 ornithine decarboxylase, inducible	ornithine decarboxylase isozyme Code: E; COG: COG1982	Ornithine decarboxylase PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein KEGG: she:Shewmr4_3667 ornithine decarboxylase	Ornithine decarboxylase	Ornithine decarboxylase	ornithine decarboxylase, constitutive	Ornithine decarboxylase KEGG: vch:VCA1063 ornithine decarboxylase, inducible	Ornithine decarboxylase	
ECOLI02862	Uncharacterized protein yqgA	Hypothetical protein yqgA	Membrane protein, putative	Putative membrane protein	Putative transport protein	Residues 1 to 235 of 235 are 99 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli K12 ref: NP_417441.1 putative transport protein	Integral membrane protein	hypothetical protein	IPR007563: Protein of unknown function DUF554 putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Uncharacterized membrane protein, possible Na+ channel or pump Hypothetical protein	Conserved hypothetical, predicted membrane protein (TMS6)	Putative inner membrane protein	Code: R; COG: COG1811 putative transport protein	Hypothetical integral membrane protein	Code: R; COG: COG1811 putative transport protein	protein of unknown function DUF554 PFAM: protein of unknown function DUF554: (4.2e-106) KEGG: dra:DR1630 hypothetical protein, ev=1e-116, 81% identity	Putative membrane protein YqgA	Putative uncharacterized protein yqgA	Hypothetical protein	Putative inner membrane protein	Hypothetical protein	putative transport protein Code: R; COG: COG1811	conserved hypothetical protein	Uncharacterized membrane protein, possible Na+ channel or pump	Hypothetical protein	Putative uncharacterized protein	Putative transport protein	Putative uncharacterized protein	
ECOLI02863	Putative general secretion pathway protein M-type yghD	putative general secretion pathway protein M	Putative general secretion pathway protein M-type yghD	General secretion pathway protein M	General secretion pathway protein M	General secretion pathway protein M	General secretion pathway protein M	Type II secretion protein	Type II secretory pathway, component EpsM	Probable general secretory pathway m transmembrane protein	Similar to putative general secretion pathway protein hypothetical protein	conserved gene putative general secretion pathway protein M-type YghD	Similar to putative general secretion pathway protein hypothetical protein	general secretion pathway protein M	Type II secretory pathway, component PulM	identified by match to protein family HMM PF04612 general secretion pathway protein M	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative general secretion pathway protein M	Code: U; COG: COG3149 putative secretion pathway protein	Type II secretory pathway, component PulM COG3149	Code: U; COG: COG3149 putative secretion pathway protein	Hypothetical type II secretion protein GspM	General secretion pathway M protein	General secretion pathway M protein	General secretion pathway M protein	General secretion pathway M protein	Putative secretion pathway protein	General secretion pathway M protein precursor	general secretion pathway protein M identified by similarity to SP:P41850; match to protein family HMM PF04612	General secretion pathway M protein PFAM: General secretion pathway M protein KEGG: shm:Shewmr7_0160 general secretion pathway M protein	
ECOLI02864	Putative general secretion pathway protein L-type yghE	Type II secretory pathway, component EpsL	Type II secretory pathway, component PulL	putative general secretion pathway for protein export (GSP); Code: U; COG: COG3297 GspL	Code: U; COG: COG3297 putative general secretion pathway for protein export (GSP)	Hypothetical type II secretion protein	General secretion pathway L	General secretion pathway protein L	General secretion pathway protein L	Hypothetical type II secretion protein GspL	General secretion pathway protein L	general secretion pathway protein L TIGRFAM: general secretion pathway protein L PFAM: General secretion pathway L KEGG: she:Shewmr4_0164 general secretion pathway protein L	general secretion pathway protein L TIGRFAM: general secretion pathway protein L PFAM: General secretion pathway L KEGG: sfr:Sfri_0113 general secretion pathway protein L	putative type II secretion protein GspL	general secretion pathway protein L KEGG: son:SO0174 general secretion pathway protein L	General secretion pathway protein L	TIGRFAM: general secretion pathway protein L PFAM: General secretion pathway L KEGG: shm:Shewmr7_0159 general secretion pathway protein L general secretion pathway protein L	KEGG: slo:Shew_3611 general secretion pathway protein L general secretion pathway protein L	General secretion pathway protein L	General secretion pathway protein L	pseudo	General secretion pathway protein L	General secretion pathway protein GspL	General secretion pathway protein GspL	General secretion pathway protein L	Putative type II secretion protein	Putative secretion pathway protein, L-type protein	General secretion pathway protein L	Putative secretion pathway protein, L-type protein	
ECOLI02865	Putative general secretion pathway protein C-type yghF	Type II secretory pathway, component EpsC	putative general secretion pathway protein C	General secretion pathway protein C	General secretion pathway protein C	General secretion pathway protein C	Type II secretion protein	Type II secretory pathway, component EpsC	Type II secretion system protein C	general secretion pathway protein C	Type II secretory pathway, component PulC	type II secretion system protein C	identified by similarity to GP:609624; match to protein family HMM TIGR01713 general secretion pathway protein C	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative general secretion pathway protein C	general secretion pathway protein C TIGRFAMsMatches:TIGR01713	Code: U; COG: COG3031 putative general secretion protein GspC	type II secretion system protein C	Hypothetical type II secretion protein GspC	Hypothetical protein	general secretion pathway protein C	General secretion pathway protein C precursor	General secretion pathway protein C	Hypothetical type II secretion protein GspC	General secretion pathway protein C	general secretion pathway protein C identified by similarity to GB:AAA58784.1; match to protein family HMM TIGR01713	general secretion pathway protein C TIGRFAM: general secretion pathway protein C KEGG: she:Shewmr4_0155 general secretion pathway protein C	General secretion pathway protein C	general secretion pathway protein C TIGRFAM: general secretion pathway protein C PFAM: PDZ/DHR/GLGF domain protein KEGG: sfr:Sfri_0104 general secretion pathway protein C	putative type II secretion protein GspC	
ECOLI02866	Uncharacterized lipoprotein yghG	Hypothetical lipoprotein	conserved hypothetical protein	Putative lipoprotein	Predicted protein	Putative lipoprotein	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein yghG	Putative uncharacterized protein yghG	Putative uncharacterized protein yghG	Putative uncharacterized protein yghG	Putative uncharacterized protein yghG	Predicted protein	Putative uncharacterized protein yghG	YghG protein	Putative lipoprotein	Predicted protein	Uncharacterized lipoprotein YghG	
ECOLI02867	Leader peptidase pppA	Pre-pilin leader peptidase	Type 4 prepilin-like proteins leader peptide- processing enzyme	Type 4 prepilin-like proteins leader peptide- processing enzyme	Type 4 prepilin peptidase	Putative type 4 prepilin peptidase	Probable prepilin peptidase	Type III leader peptidase family	Prepilin peptidase	Type IV prepilin peptidase	Type 4 prepilin-like proteins leader peptide- processing enzyme	Type IV prepilin peptidase	Type IV prepilin-like proteins leader peptide processing enzyme	Type 4 prepilin peptidase	Late competence protein comC	Related to type IV prepilin leader peptidase	ComC protein	Late competence protein	Type 4 prepilin-like proteins leader peptide- processing enzyme	putative leader peptidase PilD	Leader peptidase	identified by match to protein family HMM PF01478 late competence protein comC	Type IV prepilin-like proteins leader peptidase	Leader peptidase PilD	Type 4 prepilin-like proteins leader peptide processing enzyme	Type 4 prepilin-like proteins leader peptide processing enzyme	Type 4 prepilin-like proteins leader peptide processing enzyme	Type IV pilus prepilin peptidase PilD	Type 4 prepilin-like proteins leader peptide processing enzyme	
ECOLI02868	Putative lipoprotein acfD homolog	Putative uncharacterized protein VPA1376	Putative uncharacterized protein	accessory colonization factor AcfD-like protein	Putative lipoprotein AcfD	Putative lipoprotein AcfD-like	putative lipoprotein AcfD-like precursor	KEGG: ecj:JW5925 predicted inner membrane lipoprotein inner membrane lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Inner membrane lipoprotein	pseudo	Putative uncharacterized protein	Inner membrane lipoprotein	Inner membrane lipoprotein	Inner membrane lipoprotein	Inner membrane lipoprotein	Inner membrane lipoprotein	Predicted inner membrane lipoprotein	Inner membrane lipoprotein	YghJ protein	Accessory colonization factor AcfD	Predicted inner membrane lipoprotein	Lipoprotein AcfD-like protein	

ECOLI02869	Glycolate permease glcA	L-lactate permease	L-lactate permease	L-lactate permease	L-lactate permease	L-lactate permease	Glycolate permease	hypothetical L-lactate permease (lctP)	Glycolate permease glcA	identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795 L-lactate permease	Lactate permease family protein	Residues 1 to 465 of 465 are 93 pct identical to residues 64 to 560 of a 560 aa protein from Escherichia coli K12 ref: NP_417449.1 putative permease	L-lactate transporter	L-lactate permease	L-lactate permease lctP homolog	identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795 L-lactate transporter	L-lactate permease	L-lactate permease	L-lactate transporter	glycolate permease identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795	Glycolate permease GlcA	L-lactate transport	Putative permease	lactate permease family protein identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795	L-lactate permease	L-lactate permease	L-lactate permease Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter	putative permease Code: C; COG: COG1620	L-Lactate permease 13 TMHs	

ECOLI02870	Malate synthase G	Malate synthase G	Malate synthase G	Malate synthase G	Malate synthase G 2	Malate synthase G	malate synthase	Malate synthase G	Residues 1 to 723 of 723 are 98 pct identical to residues 1 to 723 of a 723 aa protein from Escherichia coli K12 ref: NP_417450.1 malate synthase G	Malate synthase G	Malate synthase G	malate synthase	identified by match to protein family HMM PF01274; match to protein family HMM TIGR01345 malate synthase G	malate synthase G	Malate synthase G	malate synthase G	Malate synthase G	Malate synthase G	Malate synthase G	Malate synthase G	Malate synthase	Malate synthase	Malate synthase	malate synthase G COG2225 Malate synthase	Malate synthase G	malate synthase G KEGG: bur:Bcep18194_B0029 malate synthase TIGRFAM: malate synthase G PFAM: malate synthase	Malate synthase G	malate synthase G KEGG: pol:Bpro_4517 malate synthase G TIGRFAM: malate synthase G PFAM: malate synthase	Malate synthase PFAM: malate synthase KEGG: rsp:RSP_1980 malate synthase	
ECOLI02871	Protein glcG	Putative uncharacterized protein	Putative uncharacterized protein CPE0935	Putative uncharacterized protein	GlcG protein, putative	Protein glcG	Putative uncharacterized protein	Putative uncharacterized protein	GlcG protein	Putative uncharacterized protein	SCH24.38, conserved hypothetical protein, len: 139 aa; similar to many e.g. SW:YDHY_CITFR (EMBL:U09771) Citrobacter freundii hypothetical protein (142 aa), fasta scores; opt: 257 z-score: 321.3 E(): 1.4e-10, 35.4% identity in 130 aa overlap hypothetical protein	GlcG	Residues 7 to 140 of 140 are 99 pct identical to residues 1 to 134 of a 134 aa protein from Escherichia coli K12 ref: NP_417451.1 orf, conserved hypothetical protein	Probable glcg protein	Putative uncharacterized protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	GlcG protein	uncharacterized protein, possibly involved in utilization of glycolate or propanediol	identified by match to protein family HMM PF03928 glcG protein	identified by match to protein family HMM PF03928 glcG protein	Protein of unknown function DUF336	Protein of unknown function DUF336	conserved hypothetical protein	Protein of unknown function DUF336	protein of unknown function DUF336	protein of unknown function DUF336	protein of unknown function DUF336	Putative uncharacterized protein	Protein GlcG	
ECOLI02872	Glycolate oxidase iron-sulfur subunit	Iron-sulfur cluster-binding protein	Glycolate oxidase iron-sulfur subunit. 	Fumarate reductase	Uncharacterized iron-sulfur protein MMP1067	hypothetical protein	Glycolate oxidase subunit GlcF	Glycolate oxidase, iron-sulfur subunit	Glycolate oxidase iron-sulfur subunit	Related to glycolate oxidase, iron-sulfur subunit	similar to SP:P52074; identified by sequence similarity; putative glycolate oxidase, iron-sulfur subunit	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLYCOLATE OXIDASE IRON-SULFUR SUBUNIT PROTEIN	(S)-2-HYDROXY-ACID OXIDASE SUBUNIT GLCF	glycolate oxidase subunit, (Fe-S)protein	Glycolate oxidase subunit, (Fe-S)protein, GlcF	Glycolate oxidase subunit	GlcF; glycolate oxidase (Iron-sulfur subunit) protein	glycolate oxidase subunit (Fe-S) protein	identified by similarity to SP:P52074; match to protein family HMM PF00037; match to protein family HMM PF02754 glycolate oxidase, iron-sulfur subunit	Glycolate oxidase subunit F protein	glycolate oxidase iron-sulfur subunit	similar to BRA0182, glycolate oxidase, iron-sulfur subunit glycolate oxidase, iron-sulfur subunit	Glycolate oxidase, iron-sulfur subunit	Glycolate oxidase, iron-sulfur subunit	glycolate oxidase (Iron-sulfur subunit) protein	(S)-2-hydroxy-acid oxidase	Glycolate dehydrogenase, iron-sulfur subunit GlcF	identified by similarity to SP:P52074; match to protein family HMM PF00037; match to protein family HMM PF02754 glycolate oxidase, iron-sulfur subunit	identified by similarity to SP:P52074; match to protein family HMM PF00037; match to protein family HMM PF02754 glycolate oxidase, iron-sulfur subunit	
ECOLI02873	Glycolate oxidase subunit glcE	Glycolate oxidase subunit GlcE	(S)-2-hydroxy-acid oxidase subunit glcE	Glycolate oxidase subunit	similar to GP:14026515, and SP:P52073; identified by sequence similarity; putative glycolate oxidase, subunit GlcE	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLYCOLATE OXIDASE SUBUNIT PROTEIN	Glycolate oxidase, subunit GlcE	(S)-2-HYDROXY-ACID OXIDASE SUBUNIT GLCE	glycolate oxidase subunits GlcE	Putative glycolate oxidase subunit GlcE	identified by similarity to SP:P52073; match to protein family HMM PF01565 glycolate oxidase, GlcE subunit	Glycolate oxidase subunit E protein	Glycolate oxidase subunit GlcE	similar to BRA0181, glycolate oxidase, subunit GlcE glycolate oxidase, subunit GlcE	Glycolate oxidase, subunit GlcE	GlcE (S)-2-hydroxy-acid oxidase	Glycolate dehydrogenase, FAD-binding subunit GlcE	identified by similarity to SP:P52073; match to protein family HMM PF01565 glycolate oxidase, GlcE subunit	identified by similarity to SP:P52073; match to protein family HMM PF01565 glycolate oxidase, subunit GlcE	FAD linked oxidase, N-terminal	FAD linked oxidase	FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal	putative glycolate oxidase subunit protein	FAD linked oxidase-like	FAD linked oxidase-like	FAD linked oxidase-like	FAD linked oxidase-like protein	FAD linked oxidase-like	FAD linked oxidase-like	
ECOLI02874	Glycolate oxidase subunit glcD	Glycolate oxidase subunit; GlcD	Putative glycolate oxidase subunit GlcD	hypothetical D-lactate dehydrogenase	Glycolate oxidase subunit GlcD	(S)-2-hydroxy-acid oxidase chain D	Glycolate oxidase subunit	Glycolate oxidase subunit	Glycolate oxidase subunit glcD	similar to SP:P32718, PID:396419, GB:U00096, and PID:1790522; identified by sequence similarity; putative glycolate oxidase, subunit GlcD	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLYCOLATE OXIDASE SUBUNIT PROTEIN	Glycolate oxidase, subunit GlcD	glycolate oxidase subunit	(S)-2-hydroxy-acid oxidase chain D	glycolate oxidase subunit GlcD	Glycolate oxidase subunit GlcD	similar to Escherichia coli K12 glycolate oxidase subunit D gi: 1789351 (500 aa). BLAST with identity of 98% in 497 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	GlcD; glycolate oxidase subunit GlcD	glycolate oxidase subunit GlcD	identified by similarity to SP:P52075; match to protein family HMM PF01565; match to protein family HMM PF02913 glycolate oxidase, GlcD subunit	Glycolate oxidase, subunit GlcD	glycolate oxidase subunit	Glycolate oxidase subunit	similar to BRA0180, glycolate oxidase, subunit GlcD GlcD, glycolate oxidase, subunit GlcD	putative glycolate oxidase subunit glcD	glycolate oxidase subunit	Glycolate oxidase, subunit GlcD	GlcD (S)-2-hydroxy-acid oxidase	Glycolate oxidase, subunit GlcD	
ECOLI02875	Glc operon transcriptional activator	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Glc operon transcriptional activator	pseudo	GntR-family transcriptional regulator	GntR-family transcriptional regulator	CDS_ID OB2606; GntR family transcriptional regulator	Residues 4 to 275 of 279 are 98 pct identical to residues 1 to 272 of a 274 aa protein from Escherichia coli gb: AAA69147.1 transcriptional activator for glc operon	probable transcriptional regulator (GntR family) probable transcriptional regulator YdhC	Glc operon transcriptional activator	identified by similarity to SP:P52072; match to protein family HMM PF00392; match to protein family HMM PF07729 glc operon transcriptional activator	transcriptional regulator, GntR family	putative GntR family transcriptional regulator similarity:fasta; with=UniProt:Q63IJ6_BURPS (EMBL:BX571966); Burkholderia pseudomallei (Pseudomonas pseudomallei).; GntR family regulator protein.; length=237; id 32.719; 217 aa overlap; query 18-234; subject 10-225	Glc operon transcriptional activator	transcriptional regulator, GntR family	Glc operon transcriptional activator	GntR domain protein PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: bur:Bcep18194_B0034 transcriptional regulator, GntR family	GntR domain protein PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: pau:PA14_70710 glc operon transcriptional activator	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcriptional regulator GlcC	glc operon transcriptional activator	transcriptional activator for glc operon Code: K; COG: COG2186	Glc operon transcriptional activator	Transcriptional regulator, GntR family	GntR domain protein	Transcriptional regulator, GntR family	Glc operon transcriptional activator GlcC	
ECOLI02876	Putative uncharacterized protein yghO	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein yghO	PMID: 97426617 best DB hits: BLAST: pir:C65084; hypothetical protein b2981 - Escherichia coli (strain; E=9e-35 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Similar to Bacteroides thetaiotaomicron conserved hypothetical protein, with a weak acyltransferase domain BT3032 SWALL:Q8A3C2 (EMBL:AE016938) (378 aa) fasta scores: E(): 7.3e-133, 88.06% id in 377 aa, and to Porphyromonas gingivalis W83 hypothetical protein PG0276 SWALL:AAQ65496 (EMBL:AE017173) (395 aa) fasta scores: E(): 2.1e-86, 57.67% id in 378 aa conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	DATP pyrophosphohydrolase	Hypothetical protein	Putative uncharacterized protein	hypothetical protein	conserved hypothetical protein KEGG: plt:Plut_1167 hypothetical protein	conserved hypothetical protein KEGG: plt:Plut_1167 hypothetical protein	conserved hypothetical protein KEGG: nmu:Nmul_A0400 hypothetical protein	conserved hypothetical protein KEGG: neu:NE0799 hypothetical protein	conserved hypothetical protein identified by similarity to GB:CAD78445.1	conserved protein Also detected in the membrane fraction by proteomics. cytoplasmic protein	conserved hypothetical protein	
ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	
ECOLI02877	Inner membrane protein yghQ	Hypothetical protein yghQ	Product confidence : putative Gene name confidence : hypothetical putative membrane protein, similar to putative polysaccharide transporter	Residues 1 to 355 of 449 are 98 pct identical to residues 1 to 355 of a 355 aa protein YGHQ_ECOLI sp: Q46841 orf, conserved hypothetical protein	COG2244 conserved hypothetical protein	Hypothetical protein	Code: R; COG: COG2244 conserved hypothetical protein	Putative uncharacterized protein	Polysaccharide biosynthesis family protein	Putative uncharacterized protein yghQ	hypothetical protein COG2244 Membrane protein involved in the export of O-antigen and teichoic acid	conserved hypothetical protein	Putative polysaccharide biosynthesis protein	Polysaccharide biosynthesis protein	Predicted inner membrane protein	Putative polysaccharide biosynthesis protein	Polysaccharide biosynthesis protein	Putative polysaccharide biosynthesis protein	Polysaccharide biosynthesis protein	Putative uncharacterized protein	Putative membrane protein involved in the export of O-antigen and teichoic acid	Putative uncharacterized protein	Inner membrane protein YghQ, putative	Putative membrane protein, conserved protein	Putative membrane protein, conserved protein	Putative membrane protein, conserved protein	Putative membrane protein, conserved protein	Putative membrane protein, conserved protein	Predicted inner membrane protein	
ECOLI02878	Uncharacterized ATP-binding protein yghR	Residues 1 to 252 of 252 are 97 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli K12 ref: NP_417458.1 orf, conserved hypothetical protein	conserved hypothetical protein	Hypothetical ATP-binding protein YghR	Putative uncharacterized protein yghR	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yghR	Putative uncharacterized protein yghR	Putative uncharacterized protein yghR	Putative uncharacterized protein yghR	Putative uncharacterized protein yghR	Conserved predicted protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein yghR	YghR protein	Predicted protein with nucleoside triphosphate hydrolase domain	conserved hypothetical protein contains nucleoside triphosphate hydrolase domain	Predicted protein with nucleoside triphosphate hydrolase domain	
ECOLI02879	Uncharacterized ATP-binding protein yghS	Residues 1 to 237 of 237 are 97 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli K12 ref: NP_417459.1 orf, conserved hypothetical protein	conserved hypothetical protein	Hypothetical ATP-binding protein YghS	Hypothetical ATP-binding protein YghS	putative ATP-binding protein YghS	Putative lipoprotein	Predicted protein with nucleoside triphosphate hydrolase domain	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein yghS	Putative uncharacterized protein yghS	Putative uncharacterized protein yghS	Putative uncharacterized protein yghS	Putative uncharacterized protein yghS	Conserved predicted protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein yghS	YghS protein	Predicted protein with nucleoside triphosphate hydrolase domain	conserved hypothetical protein contains nucleoside triphosphate hydrolase domain	Uncharacterized ATP-binding protein YghS	
ECOLI02880	Uncharacterized ATP-binding protein yghT	Residues 1 to 230 of 230 are 99 pct identical to residues 1 to 230 of a 230 aa protein from Escherichia coli K12 ref: NP_417460.1 orf, conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical ATP-binding protein YghT	Hypothetical ATP-binding protein YghT	putative protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein	Predicted protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yghT	pseudo	Putative uncharacterized protein yghT	Putative uncharacterized protein yghT	Putative uncharacterized protein yghT	Conserved predicted protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein yghT	YghT protein	Predicted protein with nucleoside triphosphate hydrolase domain	conserved hypothetical protein contains nucleoside triphosphate hydrolase domain	Predicted protein with nucleoside triphosphate hydrolase domain	
ECOLI02881	Probable low-affinity inorganic phosphate transporter 2	Phosphate transporter family protein	Phosphate transporter family protein	Phosphate transporter	Probable low-affinity inorganic phosphate transporter 2	Putative phosphate permease HP_1491	Phosphate transporter family protein	Partial putative transport protein	Low-affinity phosphate transporter lipoprotein transmembrane	Lin2351 protein	Residues 1 to 499 of 499 are 99 pct identical to residues 1 to 499 of a 499 aa protein from Escherichia coli K12 ref: NP_417461.1 low-affinity phosphate transport	identified by match to protein family HMM PF01384 phosphate transporter family protein	Phosphate transporter protein	InterProMatches:IPR001204; Molecular Function: inorganic phosphate transporter activity (GO:0005315), Biological Process: phosphate transport (GO:0006817), Cellular Component: membrane (GO:0016020) low-affinity inorganic phosphate transporter	phosphate transporter	low-affinity inorganic phosphate transporter	phosphate transporter	Code: P; COG: COG0306 low-affinity phosphate transport	putative phosphate transporter	Phosphate transporter	Code: P; COG: COG0306 low-affinity phosphate transport	Probable low-affinity inorganic phosphate transporter 2	phosphate permease	Probable low-affinity inorganic phosphate transporter 2	putative phosphate transporter Probable low-affinity phosphate transporter protein, PitA. Involved in phosphate transport depending on the proton motive force in E.coli. Similar to Pho-4, a cation-phosphate symporter in N. crassa. InterPro: Phosphate transporter family Signal peptide. High confidence in function and specificity	phosphate transporter PFAM: phosphate transporter KEGG: sco:SCO4138 phosphate transport protein	phosphate transporter PFAM: phosphate transporter KEGG: sil:SPO0967 phosphate transporter family protein	putative low-affinity inorganic phosphate transporter 2	phosphate transporter	
ECOLI02882	Bifunctional glutathionylspermidine synthetase/amidase	Glutathionylspermidine synthase	Glutathionylspermidine synthetase/amidase	Residues 2 to 620 of 620 are 100 pct identical to residues 1 to 619 of a 619 aa protein from Escherichia coli K12 ref: NP_417462.1 glutathionylspermidine synthetase-amidase	bifunctional; IPR005494: Glutathionylspermidine synthase; IPR007921: CHAP glutathionylspermidine synthetase; glutathionylspermidine amidase	similar to Salmonella typhi CT18 glutathionylspermidine synthetase/amidase glutathionylspermidine synthetase/amidase	trypanothione synthetase, putative	Glutathionylspermidine synthase Gsp protein	Glutathionylspermidine synthetase	go_component: cytosol [goid 0005829]; go_function: trypanothione-disulfide reductase activity [goid 0015042]; go_process: trypanothione biosynthesis [goid 0019342] trypanothione synthetase, putative	Code: E; COG: COG0754 glutathionylspermidine synthetase/amidase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7775463; Product type e : enzyme bifunctional: glutathionylspermidine amidase (N-terminal); glutathionylspermidine synthetase (C-terminal)	Code: E; COG: COG0754 glutathionylspermidine synthetase/amidase	Code: E; COG: COG0754 glutathionylspermidine synthetase/amidase	Glutathionylspermidine amidase	Glutathionylspermidine synthetase/amidase	Glutathionylspermidine synthase	trypanothione synthetase, putative	glutathionylspermidine synthetase/amidase Code: E; COG: COG0754	fused glutathionylspermidine amidase and glutathionylspermidine synthetase PFAM: glutathionylspermidine synthase; CHAP domain containing protein KEGG: pha:PSHAa2455 bifunctional: glutathionylspermidine amidase (N-terminal); glutathionylspermidine synthetase (C-terminal)	trypanothione synthetase, putative previous systematic id LinJ27.1830	glutathionylspermidine synthase	Glutathionylspermidine synthase	Bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase	Putative uncharacterized protein	Glutathionylspermidine amidase/glutathionylspermidine synthase	Glutathionylspermidine amidase	Glutathionylspermidine amidase	Fused glutathionylspermidine amidase; glutathionylspermidine synthetase	
ECOLI02883	Uncharacterized GST-like protein yghU	Glutathione S-transferase	Glutathione S-transferase	Possible transferase	Hypothetical GST-like protein yghU	Glutathione S-transferase family protein	Putative glutathione S-transferase	Glutathione S-transferase family protein	Putative glutathione S-transferase	Putative glutathione S-transferase	Putative uncharacterized protein	hypothetical protein	Possible glutathione-S-transferase	Glutathione S-transferase	Residues 1 to 304 of 304 are 98 pct identical to residues 1 to 304 of a 304 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289567.1 orf, conserved hypothetical protein	Putative glutathione S-transferase	identified by similarity to GB:BAB49280.1 conserved hypothetical protein	glutathione S-transferase family	Glutathione S-transferase protein	IPR004045: Glutathione S-transferase, N-terminal; IPR004046: Glutathione S-transferase, C-terminal putative glutathione S-transferase	similar to Salmonella typhi CT18 possible transferase possible transferase	Putative glutathione S-transferase	Low similarity to glutathione S-transferase Conserved hypothetical protein	Glutathione S-transferase family protein	glutathione S-transferase family	Putative glutathione S-transferase	identified by match to protein family HMM PF00043; match to protein family HMM PF02798 glutathione S-transferase family protein	identified by similarity to GB:BAC48204.1 glutathione S-transferase family protein	Glutathione S-transferase, C-terminal	
ECOLI02884	Hydrogenase-2 operon protein hybG	Hydrogenase-2 component protein	Hydrogenase-2 operon protein hybG	HYDROGENASE EXPRESSION/FORMATION PROTEIN	Hydrogenase-2 operon protein hybG	Putative hypC	Residues 1 to 82 of 82 are 100 pct identical to residues 1 to 82 of a 82 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289568.1 hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2	IPR001109: Hydrogenase expression/formation protein (HUPF/HYPC) hydrogenase-2 operon protein	similar to Salmonella typhi CT18 hydrogenase-2 component protein hydrogenase-2 component protein	Hydrogenase maturation factor HypC protein	Hydrogenase-2 operon protein	[NiFe] hydrogenase metallocenter assembly protein HypC	Code: O; COG: COG0298 hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2	hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2; Code: O; COG: COG0298 HybG	hydrogenase assembly chaperone hypC/hupF	may effect maturation of large subunit of hydrogenase-2; Code: O; COG: COG0298 hydrogenase-2 operon protein	Hydrogenase-2 operon protein HybG	Hydrogenase assembly chaperone hypC/hupF	Hydrogenase-2 operon protein HybG	hydrogenase assembly chaperone hypC/hupF TIGRFAM: hydrogenase assembly chaperone hypC/hupF PFAM: hydrogenase expression/formation protein (HUPF/HYPC) KEGG: sma:SAV7376 putative hydrogenase expression/formation protein	Hydrogenase maturation factor	hydrogenase assembly chaperone hypC/hupF TIGRFAM: hydrogenase assembly chaperone hypC/hupF PFAM: hydrogenase expression/formation protein (HUPF/HYPC) KEGG: rsp:RSP_0508 hydrogenase expression/formation protein HypC	Hydrogenase expression/formation protein, HupF/HypC	hydrogenase assembly chaperone HypC/HupF identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074	Hydrogenase-2 operon protein	Hydrogenase assembly chaperone HypC/HupF	Hydrogenase-2 operon protein hybG Code: O; COG: COG0298	hydrogenase assembly chaperone hypC/hupF TIGRFAM: hydrogenase assembly chaperone hypC/hupF PFAM: hydrogenase expression/formation protein (HUPF/HYPC) KEGG: son:SO2092 hydrogenase assembly chaperone hypC/hupF	HypC2 similar to Nostoc sp. PCC 7120 HypC (NP_484738)	
ECOLI02885	Probable hydrogenase nickel incorporation protein hybF	Probable hydrogenase nickel incorporation protein hypA	Probable hydrogenase nickel incorporation protein hypA	Probable hydrogenase nickel incorporation protein hypA	Probable hydrogenase nickel incorporation protein hypA	Probable hydrogenase nickel incorporation protein hypA	Probable hydrogenase nickel incorporation protein hybF	Probable hydrogenase nickel incorporation protein hybF	Probable hydrogenase nickel incorporation protein hybF	Probable hydrogenase nickel incorporation protein hypA	Residues 8 to 120 of 120 are 100 pct identical to residues 1 to 113 of a 113 aa protein from Escherichia coli K12 ref: NP_417465.1 may modulate levels of hydrogenease-2	Hydrogenase nickel incorporation protein HypA	conserved gene hydrogenase nickel incorporation protein HypA	Hydrogenase nickel incorporation protein HypA	IPR000566: Lipocalin-related protein and Bos/Can/Equ allergen; IPR000688: Hydrogenase expression/synthesis, HypA family putative hydrogenase expression/formation protein	similar to Salmonella typhi CT18 hydrogenase-2 component protein hydrogenase-2 component protein	Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) HybF protein	Probable hydrogenase nickel incorporation protein hybF	Nickel incorporation protein HybF	Hydrogenase expression/synthesis, HypA	may modulate levels of hydrogenease-2; Code: R; COG: COG0375 HybF	identified by similarity to SP:P24189; match to protein family HMM PF01155 hydrogenase nickel insertion protein HypA	may modulate levels of hydrogenease-2; Code: R; COG: COG0375 HybF	hydrogenase expression/formation protein HypA	HypA putative hydrogenase nickel incorporation protein HypA; pfam01155	hydrogenase nickel insertion protein HypA	Hydrogenase expression/synthesis, HypA	may modulate levels of hydrogenase-2; Code: R; COG: COG0375 HybF	hydrogenase expression/synthesis, HypA	
ECOLI02886	Hydrogenase-2 operon protein hybE	Hydrogenase-2 component protein	Hydrogenase-2 operon protein hybE	Hydrogenase-2 component protein	Hydrogenase-2 operon protein hybE	Putative hydrogenase expression/formation protein hupJ	Residues 1 to 162 of 162 are 99 pct identical to residues 1 to 162 of a 162 aa protein from Escherichia coli K12 ref: NP_417466.1 member of hyb operon	putative hydrogenase	similar to Salmonella typhi CT18 hydrogenase-2 component protein hydrogenase-2 component protein	Hypothetical protein	Putative hydrogenase	HybE	member of hyb operon HybE	member of hyb operon	Hydrogenase-2 operon protein HybE	Hydrogenase-2 operon protein HybE	conserved hypothetical protein	Hydrogenase expression/formation protein hupT	hydrogenase-2 operon protein HybE	Hydrogenase-2 operon protein	Member of hyb operon	Hydrogenase expression/formation protein hupJ	member of hyb operon	hydrogenase-2 operon protein HybE	HupJ, contains rubredoxin domain	Hydrogenase-2 operon protein HybE	Putative uncharacterized protein	Hydrogenase-2 operon protein HybE	Putative uncharacterized protein	
ECOLI02887	Hydrogenase 2 maturation protease	HupD hydrogenase related function	Hydrogenase maturation protease, related	Putative hydrogenase maturation protease	Hydrogenase-2 component protein	Hydrogenase maturation protease	Hydrogenase 2 maturation protease	Hydrogenase expression/formation protein, putative	Hydrogenase 2 maturation protease	Putative hydrogenase maturation protease	Probable processing element for hydrogenase-2	Residues 1 to 164 of 164 are 99 pct identical to residues 1 to 164 of a 164 aa protein from Escherichia coli K12 ref: NP_417467.1 probable processing element for hydrogenase-2	identified by similarity to SP:P37182; match to protein family HMM PF01750; match to protein family HMM TIGR00072 hydrogenase maturation protease HydD	IPR000671: Hydrogen uptake protein; IPR004419: Hydrogenase expression/formation protein; IPR006227: Hydrogenase maturation peptidase putative processing element for hydrogenase-2	similar to Salmonella typhi CT18 hydrogenase-2 component protein hydrogenase-2 component protein	Ni, Fe-hydrogenase maturation factor HyaD protein	Putative processing element for hydrogenase-2	identified by similarity to SP:P37182; match to protein family HMM TIGR00072 hydrogenase maturation protease	Peptidase M52, hydrogen uptake protein:Peptidase M52, hydrogenase expression/formation protein:Peptidase M52, hydrogenase maturation peptidase	Code: C; COG: COG0680 probable processing element for hydrogenase-2	putative Ni/Fe hydrogenase maturation protease	identified by similarity to SP:P37182; match to protein family HMM PF01750; match to protein family HMM TIGR00072 hydrogenase maturation protease	Code: C; COG: COG0680 probable processing element for hydrogenase-2	Peptidase M52, hydrogen uptake protein	Peptidase M52, hydrogenase expression/formation protein	Code: C; COG: COG0680 probable processing element for hydrogenase-2	Hydrogenase 2 maturation protease	Hydrogenase expression/formation protein	Hydrogenase 2 maturation protease	
ECOLI02888	Hydrogenase-2 large chain	Nickel-dependent hydrogenase, large subunit	F420-nonreducing hydrogenase	Coenzyme F420 hydrogenase subunit alpha	Hydrogenase-2 large subunit	Probable Ni/Fe-hydrogenase, large subunit	Hydrogenase-2 large chain	Quinone-reactive Ni/Fe hydrogenase, large subunit	Hydrogenase-2 large subunit	Quinone-reactive Ni/Fe-hydrogenase large chain	Hydrogenase-2 large chain	Periplasmic hydrogenase large subunit, dehydrogenase	Residues 1 to 567 of 567 are 100 pct identical to residues 1 to 567 of a 567 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289572.1 probable large subunit, hydrogenase-2	IPR001501: Nickel-dependent hydrogenase, large subunit hydrogenase-2, large subunit	similar to Salmonella typhi CT18 hydrogenase-2 large subunit hydrogenase-2 large subunit	Ni, Fe-hydrogenase I large subunit HyaB protein	Hydrogenase-2, large subunit	Nickel-dependent hydrogenase, large subunit	Code: C; COG: COG0374 probable large subunit, hydrogenase-2	F420-nonreducing hydrogenase	Code: C; COG: COG0374 probable large subunit, hydrogenase-2	Nickel-dependent hydrogenase, large subunit	Code: C; COG: COG0374 probable large subunit, hydrogenase-2	nickel-dependent hydrogenase, large subunit	Hydrogenase-2 large chain	Nickel-dependent hydrogenase, large subunit	Nickel-dependent hydrogenase, large subunit	Nickel-dependent hydrogenase, large subunit	Probable large subunit, hydrogenase-2	
ECOLI02889	Probable Ni/Fe-hydrogenase 2 b-type cytochrome subunit	Probable hydrogenase-2 cytochrome b subunit	Probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit	Probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit	Probable cytochrome Ni/Fe component of hydrogenase-2	Residues 1 to 392 of 392 are 99 pct identical to residues 1 to 392 of a 392 aa protein from Escherichia coli K12 ref: NP_417469.1 probable cytochrome Ni-Fe component of hydrogenase-2	IPR005614: Polysulphide reductase, NrfD putative cytochrome Ni/Fe component of hydrogenase-2	similar to Salmonella typhi CT18 probable hydrogenase-2 cytochrome b subunit probable hydrogenase-2 cytochrome b subunit	Hypothetical protein	Putative cytochrome Ni/Fe component of hydrogenase-2	Code: C; COG: COG5557 probable cytochrome Ni/Fe component of hydrogenase-2	identified by similarity to OMNI:AF0500; match to protein family HMM PF03916 putative molybdopterin oxidoreductase, membrane subunit	Molybdopterin oxidoreductase	Code: C; COG: COG5557 probable cytochrome Ni/Fe component of hydrogenase-2	Code: C; COG: COG5557 probable cytochrome Ni/Fe component of hydrogenase-2	Probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit	Probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit	nickel-dependent hydrogenase, membrane protein KEGG: aba:Acid345_4239 nickel-dependent hydrogenase, membrane protein	Polysulphide reductase, NrfD	Polysulphide reductase, NrfD PFAM: Polysulphide reductase, NrfD KEGG: mag:amb1648 polysulphide reductase	probable Ni/Fe-hydrogenase 2 b-type cytochrome subunit identified by match to protein family HMM PF03916	Ni/Fe-hydrogenase 2 B-type cytochrome subunit	probable cytochrome Ni/Fe component of hydrogenase-2 Code: C; COG: COG5557	putative Ni/Fe-hydrogenase 2 B-type cytochrome subunit	Putative Ni/Fe-hydrogenase 2 b-type cytochrome subunit	Polysulphide reductase, NrfD	Putative uncharacterized protein	Ni/Fe-hydrogenase 2 b-type cytochrome subunit	Polysulphide reductase NrfD	
ECOLI02890	Hydrogenase-2 operon protein hybA	Hydrogenase-2 small subunit	Hydrogenase-2 operon protein hybA	Hydrogenase-2 operon protein	Hydrogenase-2 operon protein hybA	Residues 1 to 328 of 328 are 100 pct identical to residues 1 to 328 of a 328 aa protein from Escherichia coli pir: A55516 hybA protein	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain; IPR006311: Twin-arginine translocation pathway signal function unknown, intitally thought to be hydrogenase-2 small subunit which now identified as hybO	similar to Salmonella typhi CT18 hydrogenase-2 small subunit hydrogenase-2 small subunit	Fe-S-cluster-containing hydrogenase components 1 HybA protein	Putative uncharacterized protein hybA	identified by similarity to SP:P33389 [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit, putative	Twin-arginine translocation pathway signal	Code: C; COG: COG0437 hydrogenase-2 small subunit	putative Ni/Fe hydrogenase, iron-sulfur cluster-binding subunit	Code: C; COG: COG0437 hydrogenase-2 small subunit	4Fe-4S ferredoxin, iron-sulfur binding protein	Code: C; COG: COG0437 hydrogenase-2 small subunit	Fe-S-cluster-containing hydrogenase	Hydrogenase-2 operon protein HybA	putative hydrogenase iron-sulfur subunit similarity to COG0437 Fe-S-cluster-containing hydrogenase components 1(Evalue: 2E-35)	Hydrogenase-2 operon protein HybA	Twin-arginine translocation pathway signal	Fe-S-cluster-containing hydrogenase components 1	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: rfr:Rfer_4089 twin-arginine translocation pathway signal	hydrogenase-2 operon protein HybA identified by match to protein family HMM PF00037; match to protein family HMM TIGR01409	Hydrogenase-2 operon protein precursor	Hydrogenase-2 small subunit	Fe-S-cluster-containing hydrogenase components 1	hydrogenase-2 small subunit Code: C; COG: COG0437	
ECOLI02891	Hydrogenase-2 small chain	Hydrogenase-2 small chain protein	Probable Ni/Fe-hydrogenase, small subunit	Hydrogenase-2 small chain precursor	Hydrogenase-2 small subunit	Hydrogenase-2 small chain	Residues 1 to 372 of 372 are 99 pct identical to residues 1 to 372 of a 372 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289575.1 putative hydrogenase subunit	IPR001821: Ni-Fe hydrogenase, small subunit; IPR006137: NADH ubiquinone oxidoreductase domain, 20 kDa subunit; IPR006311: Twin-arginine translocation pathway signal putative Ni/Fe hydrogenases, small subunit	similar to Salmonella typhi Ty2 hydrogenase-2 small chain protein hydrogenase-2 small chain protein	Ni, Fe-hydrogenase I small subunit HyaA protein	Putative Ni/Fe hydrogenases, small subunit	Ni-Fe hydrogenase, small subunit:Twin-arginine translocation pathway signal	Code: C; COG: COG1740 putative hydrogenase subunit	F420-nonreducing hydrogenase	Code: C; COG: COG1740 putative hydrogenase subunit	Ni-Fe hydrogenase, small subunit	NADH ubiquinone oxidoreductase, 20 kDa subunit	Code: C; COG: COG1740 putative hydrogenase subunit	hydrogenase (NiFe) small subunit (hydA)	Hydrogenase-2 small chain	NADH ubiquinone oxidoreductase, 20 kDa subunit	Putative hydrogenase subunit	hydrogenase (NiFe) small subunit HydA KEGG: aba:Acid345_4237 hydrogenase (NiFe) small subunit (HydA) TIGRFAM: hydrogenase (NiFe) small subunit HydA PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein	hydrogenase (NiFe) small subunit (hydA)	Ni,Fe-hydrogenase I small subunit	NADH ubiquinone oxidoreductase, 20 kda subunit	hydrogenase (NiFe) small subunit HydA KEGG: mag:amb1650 Ni,Fe-hydrogenase I small subunit TIGRFAM: hydrogenase (NiFe) small subunit HydA PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein	F420-nonreducing hydrogenase (membrane-bound), small subunit	hydrogenase (NiFe) small subunit (hydA) identified by similarity to SP:P18637; match to protein family HMM PF01058; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409	
ECOLI02892	Uncharacterized protein yghW	Hypothetical protein yghW	Putative uncharacterized protein	Uncharacterized protein yghW	Residues 1 to 95 of 95 are 100 pct identical to residues 1 to 95 of a 95 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289576.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yghW	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yghW	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	


ECOLI02894	Uncharacterized protein yghZ	Putative ion channel subunit	Possible reductase	Aldo/keto reductase family protein	Hypothetical protein yghZ	Oxidoreductase, aldo/keto reductase family	Oxidoreductase, aldo/keto reductase family	Uncharacterized protein yghZ	similar to AP003001-232|BAB50231.1| percent identity: 59 in 354 aa putative voltage-gated potassium channel beta subunit	Oxidoreductase	Residues 1 to 346 of 346 are 99 pct identical to residues 1 to 346 of a 346 aa protein from Escherichia coli O157:H7 ref: NP_311912.1 putative reductase	putative oxidoreductase	oxidoreductase	Oxidoreductase	Oxidoreductase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative oxidoreductase	identified by match to protein family HMM PF00248 oxidoreductase, aldo/keto reductase family	identified by match to protein family HMM PF00248 oxidoreductase, aldo/keto reductase family	Aldo/keto reductase	oxidoreductase	Code: C; COG: COG0667 putative reductase	Putative aldo/keto reductase (oxidoreductase)	Code: C; COG: COG0667 putative reductase	Aldo/keto reductase	Code: C; COG: COG0667 putative reductase	Aldo/keto reductase	oxidoreductase, aldo/keto reductase family identified by match to protein family HMM PF00248	Putative uncharacterized protein	Aldo/keto reductase	
ECOLI02895	UPF0114 protein yqhA	UPF0114 protein HI0507	Putative uncharacterized protein	UPF0114 protein PM1258	UPF0114 protein PA4574	Putative uncharacterized protein	UPF0114 protein yqhA	Putative membrane protein	UPF0114 protein yqhA	UPF0114 protein VC_0208	Putative membrane protein	Putative membrane protein	UPF0114 protein SO_3997	Putative membrane protein	UPF0114 protein in repA1-repA2 intergenic region	UPF0114 protein PSPTO_4583	Putative membrane protein	UPF0114 protein HP_0189	Putative uncharacterized protein	UPF0114 protein yqhA	UPF0114 protein in repA1-repA2 intergenic region	Residues 11 to 174 of 174 are 99 pct identical to residues 1 to 164 of a 164 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289579.1 orf, conserved hypothetical protein	Probable transmembrane protein	Probable uncharacterized upf0114; transmembrane protein	putative membrane protein hypothetical protein	conserved gene transmembrane protein	putative membrane protein hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02896	Uncharacterized oxidoreductase yghA	Lmo0669 protein	Dehydrogenases with different specificities	Hypothetical oxidoreductase yghA	Uncharacterized oxidoreductase yghA	CDS_ID OB3280 oxidoreductase	similar to AX065189-1|CAC25834.1| percent identity: 61 in 289 aa putative oxidoreductase	Residues 1 to 294 of 294 are 98 pct identical to residues 1 to 294 of a 294 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289580.1 putative oxidoreductase	Dehydrogenase	IPR002198: Short-chain dehydrogenase/reductase SDR; IPR002347: Glucose/ribitol dehydrogenase; IPR003560: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase putative oxidoreductase	similar to Salmonella typhi CT18 possible oxidoreductase possible oxidoreductase	hypothetical protein, similar to dehydrogenase	hypothetical protein, similar to dehydrogenase	identified by match to protein family HMM PF00106 oxidoreductase, short-chain dehydrogenase/reductase family	Putative oxidoreductase	hypothetical protein, similar to oxidoreductase	identified by match to protein family HMM PF00106 oxidoreductase, short chain dehydrogenase/reductase family	Similar to Bacillus subtilis hypothetical oxidoreductase YhxD SW:YHXD_BACSU (P40398) (299 aa) fasta scores: E(): 1.1e-63, 60.9% id in 289 aa, and to Escherichia coli hypothetical oxidoreductase YghA TR:AAG58139 (EMBL:U28377) (294 aa) fasta scores: E(): 5.5e-63, 59.79% id in 286 aa putative short chain dehydrogenase	Code: IQR; COG: COG1028 putative oxidoreductase	identified by match to protein family HMM PF00106 oxidoreductase, short chain dehydrogenase/reductase family	similar to gi|57285056|gb|AAW37150.1| [Staphylococcus aureus subsp. aureus COL], percent identity 81 in 293 aa, BLASTP E(): e-137 putative short chain dehydrogenase	Putative oxidoreductase, short chain dehydrogenase/reductase family	Code: IQR; COG: COG1028 putative oxidoreductase	oxidoreductase, short chain dehydrogenase/reductase family identified by match to protein family HMM PF00106	Code: IQR; COG: COG1028 putative oxidoreductase	Short-chain dehydrogenase/reductase SDR precursor	Hypothetical oxidoreductase YghA	conserved hypothetical protein	Hypothetical oxidoreductase YghA	
ECOLI02897	Biopolymer transport protein exbD	ExbD/TolR family protein	Biopolymer transport protein	Biopolymer transport ExbD protein	putative TonB system transport protein ExbD2	Biopolymer transport exbD protein	similar to GP:12802722, and SP:Q05606; identified by sequence similarity; putative TonB system transport protein ExbD	Biopolymer transport protein	PMID: 2670903 best DB hits: BLAST: pir:S74451; hypothetical protein sll1405 - Synechocystis sp. (strain; E=1e-08 swissprot:P18784; EXBD_ECOLI BIOPOLYMER TRANSPORT EXBD PROTEIN; E=4e-07 gb:AAC78852.1; (AF087669) ExbD [Bordetella bronchiseptica]; E=4e-06 COG: sll1405; COG0848 Biopolymer transport protein; E=1e-09 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=1.1e-11 probable Biopolymer transport exbD protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE BIOPOLYMER TRANSPORT TRANSMEMBRANE PROTEIN	TonB system transport protein ExbD	Putative uncharacterized protein EXBD	Biopolymer transport protein exbD	ExbD	Biopolymer transport protein exbD	exbD, uptake of enterochelin; tonB-dependent uptake of B colicins	Biopolymer transport exbd-related transmembrane protein	Residues 1 to 141 of 141 are 100 pct identical to residues 1 to 141 of a 141 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289582.1 uptake of enterochelin; tonB-dependent uptake of B colicins	ExbD/TolR-family transport protein	IPR003400: Biopolymer transport protein ExbD/TolR uptake of enterochelin; tonB-dependent uptake of B colicins	similar to Salmonella typhi CT18 biopolymer transport ExbD protein biopolymer transport ExbD protein	similar to BR1667, TonB system transport protein ExbD TonB system transport protein ExbD	Biopolymer transport exbD protein	Biopolymer transport exbD protein	ExbD/TolR-family transport protein	Ferric siderophore transport system, inner membrane protein ExbD	Uptake of enterochelin	ExbD protein	Biopolymer transport protein ExbD/TolR	
ECOLI02898	Biopolymer transport protein exbB	MotA/TolQ/ExbB proton channel family protein	Biopolymer transport protein	Biopolymer transport protein	Biopolymer transport protein exbB	Putative adventurous gliding motility protein R	Biopolymer transport exbB protein	similar to GP:12802721, and SP:P18783; identified by sequence similarity; putative biopolymer transport protein ExbB	Biopolymer transport protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE BIOPOLYMER TRANSPORT TRANSMEMBRANE PROTEIN	TonB system transport protein ExbB	BIOPOLYMER TRANSPORT EXBB PROTEIN	Biopolymer transport protein exbB	Residues 1 to 244 of 244 are 99 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289583.1 uptake of enterochelin; tonB-dependent uptake of B colicins	MotA/TolQ/ExbB proton channel family protein	Biopolymer transport protein ExbB	identified by similarity to SP:P18783; match to protein family HMM PF01618 TonB system transport protein ExbB	IPR002898: MotA/TolQ/ExbB proton channel uptake of enterochelin; tonB-dependent uptake of B colicins	similar to Salmonella typhi CT18 biopolymer transport ExbB protein biopolymer transport ExbB protein	similar to BR1666, biopolymer transport protein ExbB ExbB, biopolymer transport protein ExbB	Biopolymer transport exbB protein	Possible MotA/TolQ/ExbB proton channel family protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative biopolymer transport protein (ExbB)	Ferric siderophore transport system protein ExbB	Biopolymer transport protein exbB	ExbB protein	identified by match to protein family HMM PF01618 TonB system transport protein ExbB1	identified by match to protein family HMM PF01618 TonB system transport protein ExbB	MotA/TolQ/ExbB proton channel	
ECOLI02899	Cystathionine beta-lyase metC	Cystathionine beta-lyase	MetC	Cystathionine beta-lyase	Cystathionine beta lyase	Beta-cystathionase	Probable cystathionine beta-lyase	Cystathionine beta-lyase	putative cystathionine beta-lyase	Cystathionine beta-lyase	identified by match to TIGR protein family HMM TIGR01326 cystathionine beta-lyase	Cystathionine beta-lyase	Cystathionine beta-lyase	Cystathionine beta-lyase	Cystathionine beta-lyase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE CYSTATHIONINE BETA-LYASE PROTEIN	Cystathionine beta-lyase	CYSTATHIONINE BETA-LYASE	Cystathionine beta-lyase	Cystathionine beta-lyase	cystathionine beta-lyase	Cystathionine beta-lyase	Residues 1 to 395 of 395 are 100 pct identical to residues 1 to 395 of a 395 aa protein from Escherichia coli O157:H7 ref: NP_311919.1 cystathionine beta-lyase	Putative cystathionine beta-lyase	Cystathionine beta-lyase	Beta-cystathionase	IPR000277: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; IPR006233: Cystathionine beta-lyase, bacterial cystathionine beta-lyase (beta-cystathionase)	Cystathionine beta-lyase	similar to Salmonella typhi CT18 beta-cystathionase beta-cystathionase	
ECOLI02900	Inner membrane protein yghB	Putative alkaline phosphatase-like protein	Inner membrane protein yghB	Putative alkaline phosphatase	Inner membrane protein yghB	Putative DedA-family membrane protein	alkaline phosphatase	Inner membrane protein yghB	Residues 1 to 219 of 219 are 99 pct identical to residues 1 to 219 of a 219 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289586.1 orf, conserved hypothetical protein	Putative DedA-family membrane protein	Similar to DedA-family integral membrane protein YghB of Escherichia coli	IPR000252: DedA family putative DedA family, membrane protein	similar to Salmonella typhi CT18 DedA-family integral membrane protein DedA-family integral membrane protein	Putative uncharacterized protein	Putative DedA-family membrane protein	DedA family; putative alkaline phosphatase-like protein	Similar to Anabaena sp. hypothetical protein ALL5093 SWALL:Q8YM47 (EMBL:AP003598) (205 aa) fasta scores: E(): 3e-20, 37.5% id in 200 aa, and to Lactococcus lactis alkaline phosphatase like protein Apl or LL0713 SWALL:APL_LACLA (SWALL:Q9CHL6) (214 aa) fasta scores: E(): 6.7e-18, 33.49% id in 203 aa putative membrane protein	Inner membrane protein yghB	Code: S; COG: COG0586 conserved hypothetical protein	Code: S; COG: COG0586 conserved hypothetical protein	putative alkaline phosphatase-like protein	conserved hypothetical protei	Alkaline phosphatase COG0586 [S] Uncharacterized membrane-associated protein	Code: S; COG: COG0586; orf conserved hypothetical protein	Putative membrane protein	alkaline phosphatase KEGG: sth:STH2141 alkaline phosphatase	putative alkaline phosphatase-like protein	DedA family protein	Putative DedA-family membrane protein	
ECOLI02901	Uncharacterized HTH-type transcriptional regulator yqhC	Probable transcriptional regulator	AraC-type DNA-binding domain-containing protein	Probable AraC-family trancriptional regulatory protein	Hypothetical transcriptional regulator yqhC	AraC-family trancriptional regulator	Transcriptional regulator, AraC family	Putative AraC-family transcriptional regulatory protein	Putative ARAC-type regulatory protein	AraC-type DNA-binding domain-containing protein	Residues 1 to 375 of 375 are 99 pct identical to residues 1 to 375 of a 375 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289587.1 putative ARAC-type regulatory protein	AraC-family regulatory protein	IPR000005: Helix-turn-helix, AraC type putative transcriptional regulator (AraC/XylS family)	similar to Salmonella typhi CT18 probable AraC-family trancriptional regulatory protein probable AraC-family trancriptional regulatory protein	AraC-family regulatory protein	transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Putative AraC/XylS family transcriptional regulator	identified by match to protein family HMM PF00165; match to protein family HMM PF06719 transcriptional regulator, AraC family	identified by match to protein family HMM PF00165; match to protein family HMM PF06719 transcriptional regulator, AraC family	Helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type r : regulator putative AraC-family transcriptional regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	transcriptional regulator, AraC family	Transcriptional Regulator, AraC family	AraC-type DNA-binding domain-containing protein COG2207	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Hypothetical transcriptional regulator YqhC	
ECOLI02902	Alcohol dehydrogenase yqhD	Putative uncharacterized protein	Probable alcohol dehydrogenase	NADH-dependent butanol dehydrogenase	Related to butanol dehydrogenase	Lmo0554 protein	Iron-containing alcohol dehydrogenase	Putative iron-containing alcohol dehydrogenase	Hypothetical oxidoreductase yqhD	Alcohol dehydrogenase, iron-containing	Putative iron-containing alcohol dehydrogenase	Alcohol dehydrogenase, iron-containing	probable alcohol dehydrogenase	NADH-dependent butanol dehydrogenase	Alcohol dehydrogenase, iron-containing	Putative oxidoreductase	Lin0563 protein	Residues 9 to 395 of 395 are 99 pct identical to residues 1 to 387 of a 387 aa protein from Escherichia coli K12 ref: NP_417484.1 putative oxidoreductase	Putative iron-containing alcohol dehydrogenase	NADH-dependent butanol dehydrogenase	IPR001670: Iron-containing alcohol dehydrogenase putative alcohol dehydrogenase	similar to Salmonella typhi CT18 probable alcohol dehydrogenase probable alcohol dehydrogenase	Putative iron-containing alcohol dehydrogenase	identified by match to protein family HMM PF00465 alcohol dehydrogenase, iron-dependent	COG1979 NADH-dependent butanol dehydrogenase	Similar to Escherichia coli hypothetical oxidoreductase YqhD or B3011 SWALL:YQHD_ECOLI (SWALL:Q46856) (387 aa) fasta scores: E(): 3e-67, 50.51% id in 386 aa, and to Bacillus subtilis probable NADH-dependent butanol dehydrogenase 1 YugJ or BSU31370 SWALL:ADHA_BACSU (SWALL:O05239) (387 aa) fasta scores: E(): 5.5e-52, 43.55% id in 388 aa putative alcohol dehydrogenase	Butanol dehydrogenase, NADH-dependent, putative	Similar to Q8YNJ9 NADH-dependent butanol dehydrogenase from Anabaena sp. (384 aa). FASTA: opt: 1347 Z-score: 1668.9 E(): 4.6e-85 Smith-Waterman score: 1347; 52.468 identity in 385 aa overlap. contains a frameshift after aa 175. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt0517 pseudo Iron-containing alcohol dehydrogenase,pseudogene	Putative alcohol dehydrogenase	
ECOLI02903	2,5-diketo-D-gluconic acid reductase A	Lmo2247 protein	Uncharacterized oxidoreductase ML1669	2,5-diketo-D-gluconic acid reductase A	2,5-diketo-D-gluconic acid reductase A	2,5-diketo-D-gluconic acid reductase A	2,5-diketo-D-gluconic acid reductase A	Lin2349 protein	Residues 1 to 275 of 275 are 99 pct identical to residues 1 to 275 of a 275 aa protein YQHE_ECOLI sp: Q46857 orf, conserved hypothetical protein	2,5-diketo-D-gluconic acid reductase A	2,5-diketo-D-gluconic acid reductase A	Uncharacterized oxidoreductase MAP_3007	Uncharacterized oxidoreductase Rv2971/MT3049	Mb2996, -, len: 282 aa. Equivalent to Rv2971, len: 282 aa, from Mycobacterium tuberculosis strain H37Rv, (99.6% identity in 282 aa overlap). Probable oxidoreductase (EC 1.-.-.-), possibly aldo/keto reductase, equivalent to O69462 PUTATIVE OXIDOREDUCTASE from Mycobacterium leprae (282 aa), FASTA scores: opt: 1495, E(): 4.9e-93, (82.35% identity in 272 aa overlap). Also similar to others e.g. Q9KYM9|SC9H11.10C OXIDOREDUCTASE from Streptomyces coelicolor (276 aa), FASTA scores: opt: 849, E(): 1.2e-49, (51.7% identity in 267 aa overlap); Q9ZBW7|SC4B5.01C PUTATIVE OXIDOREDUCTASE from Streptomyces coelicolor (277 aa), FASTA scores: opt: 847, E(): 1.7e-49, (49.1% identity in 271 aa overlap); Q46857|YQHE_ECOLI|YQHE|B3012 HYPOTHETICAL OXIDOREDUCTASE from Escherichia coli strain K12 (275 aa), FASTA scores: opt: 827, E(): 3.7e-48, (47.45% identity in 276 aa overlap); etc. Contains PS00063 Aldo /keto reductase family putative active site signature; and PS00062 Aldo/keto reductase family signature 2. PROBABLE OXIDOREDUCTASE	IPR001395: Aldo/keto reductase 2,5-diketo-D-gluconate reductase A	similar to Salmonella typhimurium 2,5-diketo-D-gluconate reductase A 2,5-diketo-D-gluconate reductase A	Putative aldo/keto reductase family protein	identified by match to protein family HMM PF00248 oxidoreductase, aldo/keto reductase family	2,5-diketo-D-gluconic acid reductase A	Code: R; COG: COG0656 conserved hypothetical protein	Code: R; COG: COG0656 conserved hypothetical protein	aldo/keto reductase	transcript_id=ENSOCUT00000017362	Code: R; COG: COG0656; orf conserved hypothetical protein	putative 2,5-diketo-D-gluconic acid reductase A similarity:fasta; with=UniProt:DKGA_ECOLI (EMBL:U00096); Escherichia coli.; dkgA; 2,5-diketo-D-gluconic acid reductase A (EC 1.1.1.274) (2,5-DKG reductase A) (2,5-DKGR A) (25DKGR-A) (AKR5C).; length=275; id 51.471; 272 aa overlap; query 3-271; subject 2-270 similarity:fasta; with=UniProt:Q8XZA4_RALSO (EMBL:AL646064); Ralstonia solanacearum (Pseudomonas solanacearum).; PUTATIVE OXIDOREDUCTASE PROTEIN (EC 1.-.-.-).; length=276; id 61.172; 273 aa overlap; query 4-276; subject 5-276	probable oxidoreductase protein, aldo/keto reductase family similar to BMEII1060 [Brucella melitensis] Similar to swissprot:Q8YB41 Putative location:bacterial cytoplasm Psort-Score: 0.1679; go_function: oxidoreductase activity [goid 0016491]	2,5-diketo-D-gluconic acid reductase A	Putative aldo/keto reductase family protein	Alcohol dehydrogenase	
ECOLI02904	Uncharacterized protein yqhG	Putative uncharacterized protein yqhG	Residues 1 to 217 of 217 are 97 pct identical to residues 1 to 217 of a 217 aa protein from Escherichia coli O157:H7 ref: NP_311925.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yqhG	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yqhG	Putative uncharacterized protein yqhG	Putative uncharacterized protein yqhG	Putative uncharacterized protein yqhG	Putative uncharacterized protein yqhG	Predicted protein	Putative uncharacterized protein yqhG	YqhG protein	Conserved protein	Conserved protein	conserved predicted protein	
ECOLI02905	Uncharacterized lipoprotein yqhH	Putative uncharacterized protein yqhH	Residues 1 to 85 of 85 are 100 pct identical to residues 1 to 85 of a 85 aa protein from Escherichia coli K12 ref: NP_417487.1 orf, conserved hypothetical protein	Code: M; COG: COG4238 conserved hypothetical protein	Code: M; COG: COG4238 conserved hypothetical protein	Code: M; COG: COG4238; orf conserved hypothetical protein	Hypothetical lipoprotein YqhH	Hypothetical lipoprotein YqhH	conserved hypothetical protein Code: M; COG: COG4238	putative outer membrane lipoprotein	Putative lipoprotein	Predicted outer membrane lipoprotein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	YqhH	Putative uncharacterized protein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Predicted outer membrane lipoprotein	Putative outer membrane lipoprotein	YqhH protein	Predicted outer membrane lipoprotein	Predicted outer membrane lipoprotein	
ECOLI02906	UPF0313 protein ygiQ	UPF0313 protein FN0734	UPF0313 protein MJ1155	UPF0313 protein MM_1287	UPF0313 protein GSU2873	UPF0313 protein MA_4618	UPF0313 protein BT_0254	UPF0313 protein CPE1196	UPF0313 protein PA4928	UPF0313 protein TM_0337	UPF0313 protein VV2143	UPF0313 protein ygiQ	Putative uncharacterized protein	Putative Fe-S oxidoreductase	putative Fe-S oxidoreductase family 2	UPF0313 protein ygiQ	Radical SAM domain protein	UPF0313 protein VC_1711	UPF0313 protein SO_0311	UPF0313 protein PSPTO_4928	UPF0313 protein PG_0934	UPF0313 protein VP1980	UPF0313 protein ygiQ	UPF0313 protein RPA0679	UPF0313 protein VV1_2212	Residues 1 to 739 of 739 are 99 pct identical to residues 1 to 739 of a 739 aa protein from Escherichia coli O157:H7 ref: NP_311927.1 orf, conserved hypothetical protein	Putative UPF0313 protein YPO0674/y3502/YP_2990	UPF0313 protein CV_1738	IPR005839: Protein of unknown function UPF0004; IPR006638: Elongator protein 3/MiaB/NifB; IPR007197: Radical SAM putative Fe-S oxidoreductase family 2	
ECOLI02907	Protein sufI	Protein sufI	Protein sufI	Twin-arginine translocation pathway signal sequence domain protein	Putative cell division protein	Suppressor of ftsI	Residues 1 to 470 of 470 are 100 pct identical to residues 1 to 470 of a 470 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289594.1 suppressor of ftsI	Putative cell division protein	Protein SufI	IPR001117: Multicopper oxidase, type 1; IPR006311: Twin-arginine translocation pathway signal suppressor of ftsI, putative periplasmic protein	similar to Salmonella typhi CT18 SufI protein SufI protein	Putative cell division protein	Similar to: HI0733, SUFI_HAEIN SufI	Putative multicopper oxidases SufI protein	Protein sufI	Code: Q; COG: COG2132 suppressor of ftsI	Code: Q; COG: COG2132 suppressor of ftsI	putative cell division protein	Code: Q; COG: COG2132 suppressor of ftsI	multicopper oxidase, type 3 PFAM: multicopper oxidase, type 1: (0.0033) multicopper oxidase, type 2: (5.9e-22) multicopper oxidase, type 3: (1.5e-47) KEGG: sil:SPOA0360 multicopper oxidase, putative, ev=1e-134, 52% identity	probable metallo-oxidoreductase protein similar to mlr6496 [Mesorhizobium loti] and SMc01754 [Sinorhizobium meliloti] Similar to swissprot:Q989B7 Putative location:bacterial inner membrane Psort-Score: 0.1000; go_function: ATP binding [goid 0005524]; go_function: copper ion binding [goid 0005507]	Suppressor of FtsI	Putative cell division protein precursor	FtsI suppressor	Suppressor of ftsI	Cell division protein precursor	multicopper oxidase domain protein identified by match to protein family HMM PF07731; match to protein family HMM PF07732; match to protein family HMM TIGR01409	Putative cell division protein precursor	Bilirubin oxidase PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3 KEGG: cef:CE1018 putative oxidase	
ECOLI02908	1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	Putative uncharacterized protein CPE1418	PlsC	1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative	1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	putative 1-acyl-sn-glycerol-3-phosphateacyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	Putative lysophosphatidic acid acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative	1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative	1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	CDS_ID OB0869 1-acyl-sn-glycerol-3-phosphate acetyltransferase	Putative 1-acyl-SN-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	
ECOLI02909	DNA topoisomerase 4 subunit A	Topoisomerase IV subunit A	Topoisomerase IV subunit A	DNA topoisomerase 4 subunit A	Putative a subunit of topoisomerase IV	DNA topoisomerase IV, A subunit	DNA topoisomerase 4 subunit A	DNA topoisomerase 4 subunit A	Topoisomerase IV subunit A	ParC	DNA topoisomerase 4 subunit A	Topoisomerase IV, subunit A	Topoisomerase IV subunit A	Topoisomerase IV subunit A	DNA topoisomerase IV, A subunit	DNA topoisomerase IV subunit A	Topoisomerase IV subunit A	DNA topoisomerase IV, subunit A	Topoisomerase IV subunit A	putative DNA topoisomerase IV	Topoisomerase IV subunit A	identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01061 DNA topoisomerase IV, A subunit	identified by match to PFAM protein family HMM PF03989 DNA topoisomerase IV, A subunit	Topoisomerase IV, subunit A	Topoisomerase IV subunit A	Topoisomerase IV subunit A	DNA topoisomerase IV, A subunit	Topoisomerase IV subunit A	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE TOPOISOMERASE IV SUBUNIT A PROTEIN	
ECOLI02910	Putative binding protein ygiS	Putative transport periplasmic protein	Code: E; COG: COG4166 putative transport periplasmic protein	Putative binding protein YgiS	Putative binding protein YgiS	putative transporter subunit, periplasmic-binding component	Predicted transporter subunit: periplasmic- binding component of ABC superfamily	Bacterial extracellular solute-binding protein, family 5	Extracellular solute-binding protein family 5 precursor	Bacterial extracellular solute-binding protein, family 5	Bacterial extracellular solute-binding protein, family 5	Transporter subunit: periplasmic-binding component of ABC superfamily	Transporter subunit: periplasmic-binding component of ABC superfamily	Transporter subunit: periplasmic-binding component of ABC superfamily	Transporter subunit: periplasmic-binding component of ABC superfamily	Predicted transporter subunit: periplasmic- binding component of ABC superfamily	YgiS protein	Predicted transporter subunit: periplasmic- binding component of ABC superfamily	Predicted transporter subunit: periplasmic- binding component of ABC superfamily	ABC transporter, solute binding protein	Extracellular solute-binding protein family 5	
ECOLI02911	Uncharacterized HTH-type transcriptional regulator ygiT	Putative DNA-binding protein	Putative DNA-binding protein	Predicted transcriptional regulators	Putative uncharacterized protein	Putative DNA binding (HTH) protein	Transcriptional regulator, Cro/CI family	conserved hypothetical protein	transcriptional regulator, XRE family	transcriptional regulator, XRE family	transcriptional regulator, XRE family	Hypothetical protein	transcriptional regulator with HTH domain	transcriptional regulator, XRE family	helix-turn-helix domain protein PFAM: helix-turn-helix domain protein KEGG: cch:Cag_0845 transcriptional regulator, XRE family	Hypothetical protein	Helix-turn-helix domain protein	transcriptional regulator, XRE family SMART: helix-turn-helix domain protein KEGG: nha:Nham_4657 transcriptional regulator, XRE family	transcriptional regulator, XRE-family	Hypothetical protein	Transcriptional regulator, XRE family	transcriptional regulator, XRE family SMART: helix-turn-helix domain protein KEGG: bmu:Bmul_4193 transcriptional regulator, XRE family	Transcriptional regulator, XRE family	Predicted DNA-binding transcriptional regulator	Putative transcriptional regulator	Transcriptional regulator, Cro/CI family	Transcriptional regulator, XRE family	Putative transcriptional regulator, HTH cro/C1- type DNA-binding domain	Transcriptional regulator, XRE family	
ECOLI02912	Motility quorum-sensing regulator mqsR	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Hypothetical protein	hypothetical cytosolic protein	conserved hypothetical protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein KEGG: bur:Bcep18194_B1537 hypothetical protein	Putative uncharacterized protein	Quorum-sensing regulator	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Motility quorum-sensing regulator	
ECOLI02913	Uncharacterized protein ygiV	Probable transcriptional regulator ygiV	Residues 1 to 160 of 160 are 98 pct identical to residues 1 to 160 of a 160 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289598.1 orf, conserved hypothetical protein	Code: L; COG: COG3449 conserved hypothetical protein	Code: L; COG: COG3449 conserved hypothetical protein	Code: L; COG: COG3449; orf conserved hypothetical protein	Possible AraC-family transcriptional regulator	Putative uncharacterized protein ygiV	DNA gyrase inhibitor	conserved hypothetical protein Code: L; COG: COG3449	putative transcriptional regulator	Transcription activator effector binding domain/DNA gyrase inhibitor domain protein	Predicted transcriptional regulator	Transcription activator effector binding domain/DNA gyrase inhibitor domain protein	Transcription activator effector binding	Transcription activator effector binding domain/DNA gyrase inhibitor domain protein	Transcription activator effector binding domain/DNA gyrase inhibitor domain protein	Transcription activator effector binding domain/DNA gyrase inhibitor domain protein	Putative uncharacterized protein	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Predicted transcriptional regulator	Putative transcriptional regulator	YgiV protein	Predicted transcriptional regulator	Predicted transcriptional regulator	
ECOLI02914	Protein ygiW	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized conserved protein	Possible exported protein	conserved hypothetical protein	Protein ygiW	Putative exported protein	Putative exported protein	Putative exported protein	Putative uncharacterized protein VPA0694	Protein ygiW	Putative uncharacterized protein	Residues 20 to 149 of 149 are 99 pct identical to residues 1 to 130 of a 130 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289599.1 orf, conserved hypothetical protein	Putative exported protein	Similar to putative exported protein YgiW of Escherichia coli	IPR005220: Conserved hypothetical protein 156 putative outer membrane protein	similar to Salmonella typhi CT18 possible exported protein possible exported protein	Putative exported protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative membrane protein	Protein YgiW precursor	Similar to: HI1709, YGIW_HAEIN conserved hypothetical protein	Putative uncharacterized protein	Putative outer membrane protein	Code: S; COG: COG3111 conserved hypothetical protein	Code: S; COG: COG3111 conserved hypothetical protein	Code: S; COG: COG3111; orf conserved hypothetical protein	Putative uncharacterized protein precursor	conserved hypothetical protein	
ECOLI02915	Transcriptional regulatory protein qseB	Transcriptional regulatory protein qseB	Transcriptional Regulatory protein qseB	Two-component system response regulator	Transcriptional regulatory protein qseB	Residues 1 to 219 of 219 are 99 pct identical to residues 1 to 219 of a 219 aa protein from Escherichia coli O157:H7 ref: NP_311934.1 putative 2-component transcriptional regulator	Transcriptional regulatory protein qseB	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal putative transcriptional regulator (OmpR family)	similar to Salmonella typhi CT18 probable two-component system response regulator. probable two-component system response regulator.	Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain OmpR protein	Transcriptional regulatory protein qseB	similar to quorum sensing Escherichia coli regulator B; Code: TK; COG: COG0745 quorum sensing regulator B	quorum sensing Escherichia coli regulator B; Code: TK; COG: COG0745 QseB	Two component Transcriptional regulator, Winged helix family	Code: TK; COG: COG0745 putative 2-component transcriptional regulator	Probable transcriptional regulatory protein YgiX	Transcriptional Regulatory protein QseB	Two-component system response regulator	QseB quorum sensing Escherichia coli regulator B; Code: TK; COG: COG0745	transcriptional regulatory protein QseB	Two component transcriptional regulator, winged helix family precursor	Putative 2-component transcriptional regulator	Putative uncharacterized protein	Transcriptional regulatory protein QseB	Two component transcriptional regulator, winged helix family precursor	Two component transcriptional regulator, winged helix family precursor	DNA-binding response regulator in two-component regulatory system with QseC	Transcriptional regulatory protein QseB	Two component transcriptional regulator, winged helix family precursor	
ECOLI02916	Sensor protein qseC	Sensor protein qseC	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein qseC	Sensor protein	Sensor protein	Sensor protein qseC	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein qseC	Sensor protein	Residues 1 to 424 of 424 are 93 pct identical to residues 1 to 449 of a 449 aa protein from Escherichia coli K12 ref: NP_417498.1 putative 2-component sensor protein	Sensor protein	similar to sensor histidine kinase hypothetical protein	Sensor protein	Signal transduction histidine-protein kinase/phosphatase mprB	Sensor protein	IPR003594: ATP-binding region, ATPase-like; IPR003660: Histidine kinase, HAMP region; IPR003661: Histidine kinase A, N-terminal;IPR004358: Bacterial sensor protein, C-terminal;IPR005467: Histidine kinase putative sensory histidine kinase in regulatory system	similar to Salmonella typhi CT18 probable two-component system sensor histidine kinase probable two-component system sensor histidine kinase	Putative two-component system sensor kinase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative histidine kinase of 2-component regulatory system	Sensor protein	
ECOLI02918	Modulator of drug activity B	Modulator of drug activity B homolog	Putative uncharacterized protein	MdaB protein homolog	NAD(P)H dehydrogenase, quinone family	Modulator of drug activity B	NAD(P)H dehydrogenase (Quinone); possible modulator of drug activity B	Conserved hypothetical protein	Modulator of drug activity B	identified by match to protein family HMM PF02525 NAD(P)H dehydrogenase, quinone family	Flavodoxin-like fold domain protein	Putative modulator of drug activity B	Modulator of drug activity	Modulator of drug activity B	Residues 1 to 193 of 193 are 98 pct identical to residues 1 to 193 of a 193 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289602.1 modulator of drug activity B	Putative modulator of drug activity	Putative nad(P)h dehydrogenase (Quinone); protein	identified by match to protein family HMM PF02525 flavodoxin-like fold domain protein	Molecular Function: NAD(P)H dehydrogenase (quinone) activity (GO:0003955), Biological Process: electron transport (GO:0006118) NAD(P)H dehydrogenase	IPR003680: NAD(P)H dehydrogenase (quinone) NADPH specific quinone oxidoreductase (drug modulator)	similar to Salmonella typhimurium NADPH specific quinone oxidoreductase (drug modulator) NADPH specific quinone oxidoreductase (drug modulator)	Putative modulator of drug activity MdaB	Putative	Putative modulator of drug activity	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme modulator of drug activity, similar to electron transfer flavoprotein-NAD/FAD/quinone oxidoreductase	Similar to: HI0648, MDAB_HAEIN putative NADPH-quinone reductase, modulator of drug activity B	Oxidoreductase, putative	Similar to P40717 Modulator of drug activity B from Escherichia coli (193 aa). FASTA: opt: 900 Z-score: 1129.6 E(): 4.5e-55 Smith-Waterman score: 900; 63.542 identity in 192 aa overlap. modulator of drug activity B	NADPH specific quinone oxidoreductase	
ECOLI02919	Protein ygiN	Putative uncharacterized protein	Protein ygiN	Probable quinol monooxygenase ygiN	Residues 1 to 104 of 104 are 100 pct identical to residues 1 to 104 of a 104 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289603.1 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR005479: Carbamoyl-phosphate synthase L chain, ATP-binding; IPR007138: Antibiotic biosynthesis monooxygenase putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	Putative cytoplasmic protein	Code: S; COG: COG1359 conserved hypothetical protein	Code: S; COG: COG1359 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG1359; orf conserved hypothetical protein	Putative cytoplasmic protein	Protein YgiN	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG1359	Antibiotic biosynthesis monooxygenase	Putative uncharacterized protein ygiN	Putative uncharacterized protein	Quinol monooxygenase YgiN	Antibiotic biosynthesis monooxygenase	Antibiotic biosynthesis monooxygenase	Quinol monooxygenase	Quinol monooxygenase YgiN	Antibiotic biosynthesis monooxygenase	Quinol monooxygenase YgiN	
ECOLI02920	DNA topoisomerase 4 subunit B	Topoisomerase IV subunit B	Topoisomerase IV subunit B	DNA topoisomerase 4 subunit B	DNA topoisomerase 4 subunit B	DNA topoisomerase 4 subunit B	Topoisomerase IV subunit B	ParE	DNA topoisomerase 4 subunit B	Topoisomerase IV, subunit B	DNA topoisomerase 4 subunit B	Topoisomerase IV subunit B	putative topoisomerase IV, subunit B	Topoisomerase IV subunit B	Topoisomerase IV, subunit B	DNA topoisomerase 4 subunit B	Topoisomerase IV subunit B	Topoisomerase IV subunit B	DNA topoisomerase IV, B subunit	Topoisomerase IV subunit B	Product confidence : probable Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE TOPOISOMERASE IV SUBUNIT B PROTEIN	DNA topoisomerase IV, B subunit	Topoisomerase IV subunit B	DNA topoisomerase IV, subunit B	DNA gyrase subunit B	Topoisomerase IV, subunit B	DNA topoisomerase IV subunit B	Topoisomerase IV subunit B	DNA gyrase subunit B	
ECOLI02921	Esterase yqiA	Predicted esterase	Putative uncharacterized protein STY3360	Putative uncharacterized protein	conserved hypothetical protein	Esterase yqiA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP0429	Esterase yqiA	Predicted esterase	Residues 1 to 193 of 193 are 100 pct identical to residues 1 to 193 of a 193 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289611.1 orf, conserved hypothetical protein	Predicted esterase	Putative ipr000379 esterase/lipase/thioesterase protein	Similar to unknown protein YqiA of Escherichia coli	Putative uncharacterized protein	IPR000379: Esterase/lipase/thioesterase; IPR008886: Protein of unknown function UPF0227 putative esterase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative esterase	Putative hydrolase	hypothetical protein	
ECOLI02922	Protein icc	Possible ICC (3',5'-cyclic-nucleotide phosphodiesterase) protein homolog	Icc	Putative uncharacterized protein	Cyclic AMP phosphodiesterase	Putative uncharacterized protein	Putative uncharacterized protein STY3361	3',5'-cyclic-nucleotide phosphodiesterase	Putative uncharacterized protein ML2210	putative cyclic AMP phosphodiesterase	Icc protein	Cyclic AMP phosphodiesterase	Putative uncharacterized protein	Putative uncharacterized protein	LacZ expression regulator	cAMP phosphodiesterase	Ser/Thr protein phosphatase	Putative uncharacterized protein	Putative phosphoesterase	Cyclic AMP phosphodiesterase	Protein icc	3',5'-cyclic-nucleotide phosphodiesterase	Putative uncharacterized protein	Cyclic AMP phosphodiesterase	Residues 1 to 275 of 275 are 99 pct identical to residues 1 to 275 of a 275 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289612.1 regulator of lacZ	Icc protein homologue	Putative cog1409, predicted phosphohydrolases , metallophosphoesterase; protein	Icc protein	hypothetical protein	
ECOLI02923	Uncharacterized protein yqiB	Putative uncharacterized protein VV0585	Putative uncharacterized protein STY3362	conserved hypothetical protein	Hypothetical protein yqiB	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP0427	Uncharacterized protein yqiB	Putative uncharacterized protein	Residues 1 to 140 of 140 are 100 pct identical to residues 1 to 140 of a 140 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289613.1 putative enzyme	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	phosphohydrolase (MutT/nudix family protein)	Putative uncharacterized protein	Uncharacterized conserved protein	Putative cytoplasmic protein	identified by similarity to OMNI:NTL03ST2966 conserved hypothetical protein	identified by similarity to GB:AAN70485.1; match to protein family HMM PF06853 conserved hypothetical protein	identified by match to protein family HMM PF06853 conserved hypothetical protein	Protein of unknown function DUF1249	Code: S; COG: COG3151 putative enzyme	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3151 putative enzyme	conserved hypothetical protein	
ECOLI02924	ADP-ribose pyrophosphatase	Putative uncharacterized protein	Adenosine diphosphate sugar pyrophosphatase	MutT/nudix family protein	Putative uncharacterized protein STY3363	Putative MutT/nudix family protein	ADP-ribose pyrophosphatase	MutT/nudix family protein	MutT/nudix family protein	ADP-ribose pyrophosphatase	MutT/nudix family protein	hypothetical protein	MutT/nudix family protein	ADP-ribose pyrophosphatase	Putative MutT/ADP-ribose pyrophosphatase	MutT/nudix family protein	Residues 1 to 209 of 209 are 100 pct identical to residues 1 to 209 of a 209 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289614.1 orf, conserved hypothetical protein	Putative MutT-family protein	Putative uncharacterized protein	ADP-ribose pyrophosphatase	IPR000086: NUDIX hydrolase; IPR004385: Conserved hypothetical protein 52 putative resistance protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	ADP-ribose pyrophosphatase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme adenosine diphosphate sugar pyrophosphatase (ADP-ribose pyrophosphatase)	Putative uncharacterized protein	ADP-ribose pyrophosphatase	ADP-ribose diphosphatase; adenosine diphosphoribose pyrophosphatase; ADPR-PPase; ADP-ribose phosphohydrolase; Similar to: HI0398, ADPP_HAEIN ADP-ribose pyrophosphatase	NTP pyrophosphohydrolases including oxidative damage repair enzymes MutT protein	MutT/nudix family protein	
ECOLI02925	Outer membrane protein tolC	Possible RND family outer membrane efflux protein	Type I secretion system outer membrane protein RsaF	Probable outer membrane protein	Outer membrane protein TolC	Related to outer membrane protein TolC	Putative outer membrane efflux protein	Outer membrane export factor	Outer membrane protein tolC	pseudo	Putative outer membrane protein	Outer membrane protein TolC	Outer membrane protein	Outer membrane efflux protein TolC, putative	Putative outer membrane protein	Putative outer membrane protein TolC	Outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes	Type I secretion outer membrane protein	Outer membrane protein TolC	Residues 12 to 506 of 506 are 99 pct identical to residues 1 to 495 of a 495 aa protein from Escherichia coli K12 ref: NP_417507.1 outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes	ABC-transporter outer membrane component	Outer membrane efflux protein	Probable porin (Omp) abc transporter protein	Outer membrane protein TolC	similar to outer membrane protein TolC hypothetical protein	IPR003423: Outer membrane efflux protein outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes, role in organic solvent tolerance	Outer membrane protein	similar to Salmonella typhi CT18 outer membrane protein TolC precursor outer membrane protein TolC precursor	ABC-transporter outer membrane efflux component	
ECOLI02927	UPF0441 protein ygiB	Putative uncharacterized protein	Putative uncharacterized protein VV2268	UPF0441 protein ygiB	hypothetical integral membrane protein	Hypothetical protein ygiB	UPF0441 protein ECA0329	Putative uncharacterized protein VP1066	UPF0441 protein ygiB	Putative uncharacterized protein	Residues 1 to 191 of 191 are 100 pct identical to residues 44 to 234 of a 234 aa protein from Escherichia coli K12 ref: NP_417509.1 orf, conserved hypothetical protein	UPF0441 protein YPO0661/y3517/YP_2976	UPF0441 protein plu3956	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 possible lipoprotein possible lipoprotein	Putative uncharacterized protein	UPF0441 protein YPTB3401	UPF0441 protein ygiB	conserved hypothetical protein	Code: S; COG: COG5463 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG5463 conserved hypothetical protein	conserved hypothetical protein	predicted integral membrane protein COG5463	Code: S; COG: COG5463; orf conserved hypothetical protein	putative transmembrane protein similarity:fasta; SWALL:Q7CXV9 (EMBL:AE008127); Agrobacterium tumefaciens; agr_c_3818p; length 198 aa; id=43.07; ungapped id=46.4; E()=3.1e-21; 195 aa overlap; query 9-194 aa; subject 7-196 aa	putative secreted protein	UPF0441 protein ygiB	
ECOLI02928	Uncharacterized protein ygiC	Glutathionylspermidine synthase	Putative uncharacterized protein STY3366	conserved hypothetical protein	Hypothetical protein ygiC	Putative glutathionylspermidine synthase	Putative uncharacterized protein VP1067	Uncharacterized protein ygiC	Putative uncharacterized protein	Residues 1 to 386 of 386 are 99 pct identical to residues 1 to 386 of a 386 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289618.1 putative synthetase-amidase	Putative uncharacterized protein	Similar to putative synthetase/amidase YgiC of Escherichia coli	IPR005494: Glutathionylspermidine synthase putative glutathionylspermidine synthase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative glutathionylspermidine synthase	Code: E; COG: COG0754 putative synthetase/amidase	Code: E; COG: COG0754 putative synthetase/amidase	conserved hypothetical protein	Glutathionylspermidine synthase COG0754	Code: E; COG: COG0754 putative synthetase/amidase	Putative glutathionylspermidine synthase	Hypothetical protein	Glutathionylspermidine synthase	Putative synthetase/amidase	Hypothetical protein	Hypothetical protein	putative synthetase/amidase Code: E; COG: COG0754	Hypothetical protein	
ECOLI02929	Uncharacterized protein ygiD	conserved hypothetical protein;	4,5-DOPA dioxygenase extradiol-like protein [Source:GeneDB_Spombe;Acc:SPBC1709.16c]	Putative uncharacterized protein	DEHA2F22088p;highly similar to CA4579|IPF2234 Candida albicans IPF2234;	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein STY3367	Oxidoreductase	Putative uncharacterized protein	Hypothetical protein ygiD	identified by match to protein family HMM PF02900 oxidoreductase	conserved hypothetical protein	Putative uncharacterized protein	best DB hits: BLAST: gb:AAG58178.1; AE005533_11 (AE005533) orf, hypothetical protein; E=1e-59 swissprot:P24197; YGID_ECOLI HYPOTHETICAL 29.9 KD PROTEIN IN; E=6e-59 pir:S22362; hypothetical protein C - Escherichia coli ----- gb:; E=1e-54 COG: ygiD; COG3384 Uncharacterized protein; E=6e-60 conserved hypothetical protein	hypothetical conserved protein	Putative uncharacterized protein ygiD	Putative uncharacterized protein	Residues 1 to 271 of 271 are 98 pct identical to residues 1 to 271 of a 271 aa protein from Escherichia coli K12 ref: NP_417511.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	IPR004183: Catalytic LigB subunit of aromatic ring-opening dioxygenase putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Uncharacterized ACR Hypothetical protein	Putative cytoplasmic protein	Catalytic LigB subunit of aromatic ring-opening dioxygenase, putative	Code: S; COG: COG3384 conserved hypothetical protein	
ECOLI02930	Zinc transporter zupT	Integral membrane protein	ZIP zinc transporter family protein	Conserved protein	Putative uncharacterized protein	Zinc transporter zupT	Zinc transporter zupT	Zinc transporter zupT	Zinc transporter zupT	Zinc transporter zupT	GufA protein	Zinc transporter zupT	Zinc transporter	Product confidence : hypothetical Gene name confidence : hypothetical CONSERVED HYPOTHETICAL PROTEIN	Zinc uptake transporter	INTEGRAL MEMBRANE PROTEIN	Zinc transporter zupT	Zinc transporter zupT	CDS_ID OB2427 hypothetical protein	similar to AP003187-239|BAB80427.1| percent identity: 53 in 265 aa conserved hypothetical protein	SC8E7.16c, possible integral membrane protein, len: 282 aa. Similar to the several e.g. Myxococcus xanthus SW:GUFA_MYXXA(EMBL:X71062) integral membrane protein found within the carotenogenesis operon, GufA (254 aa), fasta scores opt: 173 z-score: 197.7 E(): 0.001625.8% identity in 252 aa overlap. Contains multiple possible membrane spanning hydrophobic domains. putative integral membrane protein.	Residues 7 to 271 of 271 are 99 pct identical to residues 1 to 265 of a 265 aa protein from Escherichia coli gb: AAA69208.1 orf, conserved hypothetical protein	ZIP Zinc transporter	identified by similarity to SP:P24198; match to protein family HMM PF02535 zinc transporter ZupT	IPR003689: Zinc transporter ZIP putative divalent heavy-metal cations transporter	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative integral membrane protein	Zinc transporter zupT	

ECOLI02931	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase;	3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), required for riboflavin biosynthesis from ribulose-5-phosphate, also has an unrelated function in mitochondrial respiration. [Source:SGD;Acc:S000002895]	similar to sp|Q99258 Saccharomyces cerevisiae YDR487c RIB3 3, 4-dihydroxy-2-butanone 4-phosphate synthase, hypothetical start	3,4-dihydroxy-2-butanone 4-phosphate synthase [Source:GeneDB_Spombe;Acc:SPBC23E6.06c]	similar to sp|Q99258 Saccharomyces cerevisiae YDR487c RIB3 3, 4-dihydroxy-2-butanone 4-phosphate synthase singleton, start by similarity	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	GTP cyclohydrolase II	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	similar to uniprot|Q99258 Saccharomyces cerevisiae YDR487c RIB3 3 4-dihydroxy-2-butanone 4-phosphate synthase;	DEHA2G09504p;highly similar to uniprot|Q99258 Saccharomyces cerevisiae YDR487C RIB3 3 4-dihydroxy -2-butanone-4- phosphate synthase (DHBP synthase);	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	putative 3,4-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	GTP cyclohydrolase II / 34-dihydroxy-2-butanone 4-phosphate synthase	3,4-dihydroxy-2-butanone 4-phosphate synthase	
ECOLI02932	Uncharacterized protein yqiC	Putative uncharacterized protein	Putative uncharacterized protein VV0036	Putative uncharacterized protein STY3375	conserved hypothetical protein	Hypothetical protein yqiC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP0036	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 116 of 116 are 99 pct identical to residues 1 to 116 of a 116 aa protein from Escherichia coli K12 ref: NP_417514.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YqiC of Escherichia coli	Similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	Similar to conserved hypothetical protein hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	DUF526; may be involved in protein biosynthesis	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	Uncharacterized conserved protein	Putative cytoplasmic protein	
ECOLI02933	Uncharacterized fimbrial-like protein ygiL	Hypothetical fimbrial-like protein ygiL	Putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Code: NU; COG: COG3539 putative fimbrial-like protein	Putative Yqi fimbriae subunit YgiL	conserved hypothetical protein	Fimbrial protein precursor	Putative fimbrial-like protein	Fimbrial protein	Fimbrial protein precursor	Predicted fimbrial-like adhesin protein	Fimbrial protein	Fimbrial protein precursor	Putative uncharacterized protein	Major MR/P fimbria protein	Putative fimbrial protein	Putative fimbrial protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	YgiL protein	Predicted fimbrial-like adhesin protein	predicted fimbrial-like adhesin protein	Fimbrial protein	

ECOLI01533	pseudo	Code: L; COG: COG2801 IS2 ORF2	
ECOLI02934	Putative outer membrane usher protein yqiG	Putative outer membrane usher protein	Hypothetical outer membrane usher protein yqiG	similar to Salmonella typhi CT18 probable outer membrane fimbrial usher protein probable outer membrane fimbrial usher protein	Outer membrane fimbrial usher porin	MrfC identified by match to protein family HMM PF00577	Putative outer membrane usher protein YqiG	putative outer membrane usher protein YqiG precursor	Fimbrial usher protein	Fimbrial usher protein	Fimbrial usher protein	Predicted outer membrane usher protein	Fimbrial usher protein	Fimbrial usher protein	Fimbrial biogenesis outer membrane usher protein precursor	Putative uncharacterized protein	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial biogenesis outer membrane usher protein precursor	Probable outer membrane fimbrial usher protein	Fimbrial usher protein	Fimbrial usher protein	Fimbrial usher protein	Putative fimbrial usher protein	pseudo	Outer membrane usher protein	Putative outer membrane usher protein	Putative outer membrane usher protein	Outer membrane usher protein	YqiG protein	
ECOLI02935	Uncharacterized fimbrial chaperone yqiH	Code: NU; COG: COG3121 putative membrane protein	Putative periplasmic chaperone YqiH	putative periplasmic chaperone YqiH precursor	Periplasmic pilus chaperone family protein	Predicted periplasmic pilin chaperone	Periplasmic pilus chaperone family protein	Pili assembly chaperone precursor	Putative fimbrial chaperone	Periplasmic pilin chaperone	Periplasmic pilin chaperone	Putative periplasmic pilin chaperone	Putative periplasmic pilin chaperone	Periplasmic pilin chaperone	YqiH protein	Predicted periplasmic pilin chaperone	predicted periplasmic pilin chaperone	Pili assembly chaperone, N-terminal	
ECOLI02936	Uncharacterized protein yqiI	conserved hypothetical protein	Fimbrial protein precursor	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yqiI	Putative uncharacterized protein yqiI	Putative uncharacterized protein yqiI	YqiI protein	Conserved protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI02937	Glycogen synthesis protein glgS	Glycogen synthesis protein glgS	Glycogen synthesis protein glgS	Residues 1 to 68 of 68 are 95 pct identical to residues 1 to 68 of a 68 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289624.1 glycogen biosynthesis, rpoS dependent	glycogen biosynthesis, rpoS dependent	similar to Salmonella typhi CT18 glycogen synthesis protein GlgS glycogen synthesis protein GlgS	Glycogen synthesis protein glgS	glycogen biosynthesis, rpoS dependent	glycogen biosynthesis protein GlgS	Glycogen synthesis protein glgS	Glycogen synthesis protein glgS	Putative uncharacterized protein	Glycogen synthesis protein glgS	Predicted glycogen synthesis protein	Glycogen synthesis protein glgS	Glycogen synthesis protein glgS	Glycogen synthesis protein GlgS	Putative uncharacterized protein	Putative uncharacterized protein	Glycogen synthesis protein GlgS	Conserved domain protein	Conserved domain protein	Conserved domain protein	Glycogen synthesis protein GlgS	Glycogen synthesis protein GlgS	Conserved domain protein	Glycogen synthesis protein GlgS	Conserved domain protein	Glycogen synthesis protein GlgS	
ECOLI02938	Inner membrane protein yqiJ	Putative membrane protein	Hypothetical protein yqiJ	Putative uncharacterized protein	Putative oxidoreductase	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	putative oxidoreductase	conserved hypothetical protein	putative transmembrane protein similarity:fasta; with=UniProt:Q89LS4_BRAJA (EMBL:BA000040); Bradyrhizobium japonicum.; Blr4469 protein.; length=219; id 46.890; 209 aa overlap; query 4-204; subject 8-216	protein of unknown function DUF1449 PFAM: protein of unknown function DUF1449: (6.7e-09) KEGG: jan:Jann_1795 hypothetical protein, ev=4e-56, 49% identity	hypothetical conserved protein similar to blr4469 [Bradyrhizobium japonicum] Similar to swissprot:Q89LS4 Putative location:bacterial inner membrane Psort-Score: 0.4843	Putative membrane protein YqiJ	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein yqiJ	Hypothetical protein	protein of unknown function DUF1449 PFAM: protein of unknown function DUF1449 KEGG: shm:Shewmr7_2900 protein of unknown function DUF1449	protein of unknown function DUF1449 PFAM: protein of unknown function DUF1449 KEGG: son:SO1376 hypothetical protein	protein of unknown function DUF1449 PFAM: protein of unknown function DUF1449 KEGG: shm:Shewmr7_2900 protein of unknown function DUF1449	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein KEGG: son:SO1376 hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	PFAM: protein of unknown function DUF1449 KEGG: shw:Sputw3181_2979 protein of unknown function DUF1449 protein of unknown function DUF1449	Putative inner membrane protein	
ECOLI02939	Inner membrane protein yqiK	Uncharacterized protein sll1021	Flotillin-like protein	Putative membrane protein	Putative uncharacterized protein	Putative exported protein	SPFH domain/band 7 family protein	PUTATIVE secreted or MEMBRANE PROTEIN	Flotillin-like protein	Flottilin	Band 7 protein, SPFH domain	Hypothetical protein yqiK	identified by match to protein family HMM PF01145; match to protein family HMM PF03149 SPFH domain/band 7 family protein	Putative uncharacterized protein	Flottilin	PMID: 8843436 best DB hits: BLAST: pir:T36106; hypothetical protein SCE15.03c - Streptomyces coelicolor; E=3e-87 pir:A83179; conserved hypothetical protein PA3729 [imported] -; E=4e-73 gb:AAG58185.1; AE005534_7 (AE005534) putative membrane protein; E=2e-28 COG: PA3729; COG2268 Uncharacterized BCR; E=4e-74 conserved hypothetical protein	epidermal surface antigen	Putative membrane protein	Epidermal surface antigen	SCE15.03, putative secreted protein, len: 677 aa; weak similarity to SW:YQIK_ECOLI hypothetical protein from Escherichia coli (553 aa) fasta scores; opt: 542, z-score: 501.2, E(): 1.3e-20, (27.0% identity in 504 aa overlap).  Contains possible N-terminal region signal peptide sequence also contains a highly hidrophilic central part of the protein putative secreted protein	flotillin-like protein	Flotillin-like protein	IPR001107: Band 7 protein paral putative membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Similar to Bacteroides thetaiotaomicron flotillin-like protein BT4220 SWALL:AAO79325 (EMBL:AE016944) (552 aa) fasta scores: E(): 2e-138, 94.6% id in 537 aa, and to Lactococcus lactis flotillin-like protein FloL or ll0739 SWALL:Q9CHJ2 (EMBL:AE006307) (503 aa) fasta scores: E(): 5.4e-19, 30.79% id in 526 aa, and to Bacillus subtilis hypothetical protein YuaG SWALL:YUAG_BACSU (SWALL:O32076) (509 aa) fasta scores: E(): 1.2e-15, 27.72% id in 541 aa conserved hypothetical protein	Putative membrane protein	band 7 protein, SPFH domain	conserved hypothetical protein	Code: S; COG: COG2268 putative membrane protein	
ECOLI02940	Bifunctional protein hldE	ADP-heptose synthase	Bifunctional protein hldE	Bifunctional protein hldE	Carbohydrate kinase, PfkB family	ADP-heptose synthase	Bifunctional protein hldE	Putative ADP-heptose synthase	Bifunctional protein hldE	Bifunctional protein hldE	Bifunctional protein hldE	Bifunctional protein hldE	ADP-heptose synthase	Bifunctional protein hldE	putative ADP-heptose synthase	Bifunctional protein hldE	ADP-heptose synthase, putative	ADP-heptose synthase	ADP-heptose synthase	Bifunctional protein hldE	Bifunctional protein hldE	Uncharacterized sugar kinase BUsg_057	Bifunctional protein hldE	ADP-heptose synthase	Bifunctional protein hldE	Bifunctional protein hldE	glr2641	Putative uncharacterized protein	Bifunctional protein hldE	
ECOLI02941	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia ligase adenylyltransferase domain protein	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate ammonia ligase adenylyl-transferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	putative glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	similar to GB:J03565, GB:M24008, GB:M24010, GB:M26009, GB:M26012, GB:M26013, GB:M26015, GB:M26317, GB:M26016, and PID:181920; identified by sequence similarity; putative glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	Glutamate-ammonia-ligase adenylyltransferase	PMID: 10984043 best DB hits: BLAST: pir:B83021; glutamate-ammonia-ligase adenylyltransferase PA5014; E=1e-45 swissprot:P44419; GLNE_HAEIN GLUTAMATE-AMMONIA-LIGASE; E=7e-44 swissprot:P30870; GLNE_ECOLI GLUTAMATE-AMMONIA-LIGASE; E=7e-43 COG: PA5014; COG1391 Glutamine synthetase adenylyltransferase; E=1e-46 glutamate-ammonia-ligase adenylyltransferase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE GLUTAMATE-AMMONIA-LIGASE ADENYLYLTRANSFERASE PROTEIN	Glutamate-ammonia-ligase adenylyltransferase	
ECOLI02942	Uncharacterized protein ygiF	Putative uncharacterized protein VV0577	Putative uncharacterized protein STY3381	conserved hypothetical protein	Hypothetical protein ygiF	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP0420	Putative uncharacterized protein ygiF	Putative uncharacterized protein	Residues 1 to 433 of 433 are 98 pct identical to residues 1 to 433 of a 433 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289629.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YgiF of Escherichia coli	IPR007899: CHAD; IPR008172: Adenylate cyclase putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	putative adenylate cyclase family	Putative cytoplasmic protein	identified by match to protein family HMM PF01928 conserved hypothetical protein	Code: S; COG: COG3025 conserved hypothetical protein	Code: S; COG: COG3025 conserved hypothetical protein	Adenylate cyclase	Code: S; COG: COG3025; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ygiF	CHAD domain containing protein PFAM: CHAD domain containing protein; adenylate cyclase KEGG: nmu:Nmul_A0383 adenylate cyclase	CHAD domain containing protein PFAM: CHAD domain containing protein; adenylate cyclase KEGG: mlo:mll9114 hypothetical protein	Hypothetical protein	

ECOLI02943	Uncharacterized protein ygiM	Putative uncharacterized protein	Putative uncharacterized protein	SH3 domain protein	Putative membrane protein	hypothetical protein	Hypothetical protein ygiM precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein VP0417	Uncharacterized protein ygiM	SH3 domain protein	Residues 1 to 206 of 206 are 100 pct identical to residues 1 to 206 of a 206 aa protein from Escherichia coli O157:H7 ref: NP_311965.1 orf, conserved hypothetical protein	Putative exported protein	Bacterial SH3 domain homologue	Similar to putative exported protein YgiM of Escherichia coli	IPR003646: Bacterial SH3-like region putative SH3 domain protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Conserved hypothetical membrane protein. 	arylsulfatase	Similar to: HI1605, YGIM_HAEIN conserved hypothetical protein	SH3 domain protein Hypothetical protein	Putative uncharacterized protein	Putative SH3 domain protein	identified by similarity to GP:27360197 conserved hypothetical protein	conserved hypothetical protein	identified by similarity to GB:AAN69231.1 conserved hypothetical protein	
ECOLI02944	Multifunctional CCA protein	Multifunctional CCA protein	Multifunctional CCA protein	Multifunctional CCA protein	PolyA polymerase family protein	Putative RNA nucleotidyltransferase	Poly A polymerase family protein	Multifunctional CCA protein	Multifunctional CCA protein	Multifunctional CCA protein	Multifunctional CCA protein	Poly(A) polymerase/tRNA nucleotidyl transferase	Multifunctional CCA protein	Related to poly(A) polymerase	tRNA nucleotidyltransferase/poly(A) polymerase	Multifunctional CCA protein	putative tRNA nucleotidyltransferase	Multifunctional CCA protein	tRNA nucleotidyltransferase, putative	Multifunctional CCA protein	Multifunctional CCA protein	CCA-adding enzyme	Multifunctional CCA protein	Putative tRNA nucleotidyltransferase	Multifunctional CCA protein	Multifunctional CCA protein	Multifunctional CCA protein	similar to AL583926-101|CAC32229.1| percent identity: 64 in 470 aa putative tRNA nucleotidyltransferase	PolyA polymerase family protein	
ECOLI02945	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase 1	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase 2	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase 2	Undecaprenyl-diphosphatase 3	Undecaprenyl-diphosphatase 2	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	identified by match to protein family HMM PF02673; match to protein family HMM TIGR00753 bacitracin resistance protein	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Product confidence : probable Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD BACITRACIN RESISTANCE PROTEIN PUTATIVE UNDECAPRENOL KINASE	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	bacitracin resistance protein	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	Undecaprenyl-diphosphatase	bacitracin resistance protein	
ECOLI02946	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	FolB	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	putative Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase FolB, putative	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	Putative dihydroneopterin aldolase FolB	Putative kinase	Dihydroneopterin aldolase	Putative dihydroneopterin aldolase	Dihydroneopterin aldolase	Dihydroneopterin aldolase	FolA protein	Residues 1 to 123 of 123 are 99 pct identical to residues 1 to 123 of a 123 aa protein from Escherichia coli K12 ref: NP_417530.1 putative kinase	Putative dihydroneopterin aldolase	YgiG protein	
ECOLI02947	UPF0078 membrane protein ygiH	UPF0078 membrane protein FN0537	UPF0078 membrane protein GSU0507	UPF0078 membrane protein MPN_350	UPF0078 membrane protein HI0266	UPF0078 membrane protein aq_676	UPF0078 membrane protein CC_2446	UPF0078 membrane protein NMB1062	UPF0078 membrane protein PM1696	UPF0078 membrane protein PA0581	UPF0078 membrane protein Cj0357c	UPF0078 membrane protein TM_1447	UPF0078 membrane protein VV0567	UPF0078 membrane protein DR_2021	UPF0078 membrane protein LA_1304	UPF0078 membrane protein Atu1306	UPF0078 membrane protein ygiH	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	putative membrane protein	UPF0078 membrane protein ygiH	Glycerol-3-phosphate acyltransferase	similar to GP:15074234; identified by sequence similarity; putative membrane protein, putative	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	
ECOLI02948	HTH-type transcriptional activator ttdR	HTH-type transcriptional activator ttdR	Residues 1 to 284 of 333 are 99 pct identical to residues 1 to 284 of a 310 aa protein from Escherichia coli K12 ref: NP_417532.1 putative transcriptional regulator LYSR-type	Transcriptional regulator LysR protein	Putative LysR family transcriptional regulator	HTH-type transcriptional activator ttdR	HTH-type transcriptional activator ttdR	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	putative transcriptional regulator YgiP	Transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	HTH-type transcriptional activator TtdR	Putative uncharacterized protein	Transcriptional regulator, trunscation	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	YgiP protein	Predicted DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	predicted DNA-binding transcriptional regulator, LYSR-type	Predicted DNA-binding transcriptional regulator	
ECOLI02949	L(+)-tartrate dehydratase subunit alpha	Possible fumarate hydratase (Fumarase) alpha subunit	Tartrate dehydratase	L(+)-tartrate dehydratase subunit alpha	L-TARTRATE DEHYDRATASE, SUBUNIT A	L(+)-tartrate dehydratase subunit alpha	Residues 1 to 253 of 260 are 98 pct identical to residues 11 to 263 of a 303 aa protein from Escherichia coli K12 ref: NP_417533.1 L-tartrate dehydratase, subunit A	probable fumarate hydratase, alpha subunit	L(+)-tartrate dehydratase, subunit A	IPR004646: Fe-S type hydro-lyases tartrate/fumarate alpha region putative tartrate dehydratase alpha subunit	similar to Salmonella typhi CT18 tartrate dehydratase tartrate dehydratase	Putative tartrate dehydratase alpha subunit	Fe-S type hydro-lyases tartrate/fumarate alpha region	Code: C; COG: COG1951 L-tartrate dehydratase, subunit A	Based on extensive blast search, with good homology and conservation among bacteria. Citation: J. Gen.  Microbiol. 139:1523-1530 (1993) PubMed:8371115 Putative Tartrate dehydratase alpha subunit	Code: C; COG: COG1951 L-tartrate dehydratase, subunit A	hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha protein	L(+)-tartrate dehydratase subunit alpha	Tartrate dehydratase alpha subunit	L(+)-tartrate dehydratase subunit alpha	Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain	Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit	Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit	Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit	hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region KEGG: rsp:RSP_3146 putative tartrate dehydratase alpha subunit	L-tartrate dehydratase, subunit A Code: C; COG: COG1951	Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit	tartrate dehydratase	Putative tartrate dehydratase alpha subunit	
ECOLI02950	L(+)-tartrate dehydratase subunit beta	Fumarate hydratase, beta subunit	Fumarate hydratase class I beta subunit	Fumarate hydratase, subunit beta	Fumarase	Fumarate hydratase, class I related protein	Fumarate hydratase class I, C-terminal domain	166aa long hypothetical L(+)-tartrate dehydratase	Fe-S type hydro-lyases tartrate/fumarate beta region	TtdB fumarate hydratase class I, C-terminal domain	Possible fumarate hydratase (Fumarase) beta subunit	Tartrate dehydratase	L(+)-tartrate dehydratase subunit beta	L-TARTRATE DEHYDRATASE, SUBUNIT B	L(+)-tartrate dehydratase subunit beta	Residues 1 to 201 of 201 are 100 pct identical to residues 1 to 201 of a 201 aa protein from Escherichia coli K12 ref: NP_417534.1 L-tartrate dehydratase, subunit B	probable fumarate hydratase, beta subunit	L(+)-tartrate dehydratase, subunit B	IPR004647: Fe-S type hydro-lyases tartrate/fumarate beta region putative tartrate dehydratase beta subunit	similar to Salmonella typhi CT18 tartrate dehydratase tartrate dehydratase	Putative tartrate dehydratase beta subunit	Fe-S type hydro-lyases tartrate/fumarate beta region	Code: C; COG: COG1838 L-tartrate dehydratase, subunit B	fumarate hydratase, beta subunit	based on blast alignments to other genomes. Little data to suggest anything other then putative ttdB. Putative Tartrate dehydratase beta subunit	Code: C; COG: COG1838 L-tartrate dehydratase, subunit B	Fe-S type hydro-lyases tartrate/fumarate beta protein	fumarate hydratase COG1838, pfam05683	L(+)-tartrate dehydratase subunit beta	
ECOLI02951	L-tartrate/succinate antiporter	L-tartrate/succinate antiporter	Residues 1 to 487 of 487 are 99 pct identical to residues 1 to 487 of a 487 aa protein from Escherichia coli K12 ref: NP_417535.1 orf, conserved hypothetical protein	Putative	Code: P; COG: COG0471 conserved hypothetical protein	Code: P; COG: COG0471 conserved hypothetical protein	Code: P; COG: COG0471; orf conserved hypothetical protein	L-tartrate/succinate antiporter	L-tartrate/succinate antiporter	transporter, nadc family identified by match to protein family HMM PF00939; match to protein family HMM PF03600	citrate carrier (P77405) Citrate carrier (Citrate transporter) (Citrate/succinate antiporter) High confidence in function and specificity	conserved hypothetical protein Code: P; COG: COG0471	putative tartrate:succinate antiporter	Anion transporter	Sodium:sulfate symporter family protein	Putative tartrate:succinate antiporter	Anion transporter	Predicted tartrate:succinate antiporter	Anion transporter	Anion transporter	Anion transporter	Putative uncharacterized protein	C(4)-dicarboxylates and tricarboxylates/succinate antiporter	Putative tartrate carrier	Putative tartrate carrier	Anion transporter	Putative uncharacterized protein	Putative tartrate:succinate antiporter	Putative tartrate:succinate antiporter	
ECOLI02952	Probable O-sialoglycoprotein endopeptidase	conserved hypothetical protein;	Putative metalloprotease, similar to O- sialoglycoprotein metallopeptidase from P. haemolytica; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies.  [Source:SGD;Acc:S000002262]	weakly similar to sp|P43122 Saccharomyces cerevisiae YDL104c QRI7, start by similarity	Probable O-sialoglycoprotein endopeptidase	Glycoprotease pgp1, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC1259.10]	similar to sp|P43122 Saccharomyces cerevisiae YDL104c QRI7, hypothetical start	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	similar to uniprot|P43122 Saccharomyces cerevisiae YDL104c;	identified by match to PFAM protein family HMM PF03591 O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	Probable O-sialoglycoprotein endopeptidase	
ECOLI02953	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21 A	30S ribosomal protein S21	30S ribosomal protein S21 C	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21 3	putative ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21	identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030 ribosomal protein S21	similar to SP:P02379; identified by sequence similarity; putative ribosomal protein S21	30S ribosomal protein S21	
ECOLI02954	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	identified by match to TIGR protein family HMM TIGR01391 DNA primase	Putative DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	Related to DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	DNA primase	putative DNA primase	DNA primase	
ECOLI02955	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor rpoD	identified by match to PFAM protein family HMM PF02920 RNA polymerase sigma factor RpoD	RNA polymerase sigma factor	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor	RNA polymerase sigma factor RpoD	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor rpoD	RNA polymerase sigma factor	RNA polymerase sigma factor	putative DNA-directed RNA polymerase, sigmasubunit	RNA polymerase sigma factor rpoD	similar to GB:X07898, SP:P02585, PID:1220372, PID:339736, and PID:36729; identified by sequence similarity; putative RNA polymerase sigma-70 factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma-70 factor	RNA polymerase sigma factor	PMID: 8188604 best DB hits: BLAST: pir:I40872; transcription initiation factor sigma 70 - Chlamydophila; E=1e-78 swissprot:Q9Z7F0; RPSD_CHLPN RNA POLYMERASE SIGMA FACTOR RPOD; E=9e-77 pir:E81502; RNA polymerase sigma factor, sigma-70 family CP1116; E=2e-76 COG: CPn0756; COG0568 DNA-directed RNA polymerase sigma subunits; E=8e-78 PFAM: PF00140; Sigma-70 factor; E=3.5e-109 transcription initiation factor sigma 70	predicted by Codon_usage predicted by Homology predicted by FrameD RNA POLYMERASE SIGMA FACTOR TRANSCRIPTION REGULATION PROTEIN	
ECOLI02956	G/U mismatch-specific DNA glycosylase	Putative G/U mismatch-specific DNA glycosylase	G/U mismatch-specific DNA glycosylase	G/U mismatch-specific DNA glycosylase	G/U mismatch-specific DNA glycosylase	G/U mismatch-specific DNA glycosylase	G/U mismatch-specific DNA glycosylase	Putative DNA glycosylase	Putative DNA repair protein	G/U mismatch-specific DNA glycosylase	Possible G/U mismatch-specific DNA glycosylase	2SCG18.02, mug, G/U mismatch-specific DNA glycosylase, len: 160 aa; highly similar to SW:MUG_ECOLI (EMBL:U28379) Escherichia coli mismatch-specific DNA glycosylase (EC 3.2.2.-) Mug, 168 aa; fasta scores: opt: 448 z-score: 564.7 E(): 5.7e-24; 44.7% identity in 152 aa overlap G/U mismatch-specific DNA glycosylase	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1789449 (169 aa). BLAST with identity of 99% in 168 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	G:T/U mismatch-specific DNA glycosylase	IPR005122: Uracil-DNA glycosylase superfamily DNA glycosylase, G/U mismatch specific	similar to Salmonella typhi CT18 G/U mismatch-specific DNA glycosylase G/U mismatch-specific DNA glycosylase	G/U mismatch-specific DNA glycosylase	Uracil-DNA glycosylase superfamily	putative DNA glycosylase	Code: L; COG: COG3663 conserved hypothetical protein	Code: L; COG: COG3663 conserved hypothetical protein	Uracil-DNA glycosylase superfamily	Uracil-DNA glycosylase superfamily	Code: L; COG: COG3663; orf conserved hypothetical protein	putative G/U mismatch-specific DNA glycosylase similarity:fasta; SWALL:MUG_ECOLI (SWALL:P43342); Escherichia coli, and Escherichia coli O6; g/u mismatch-specific DNA glycosylase; muG; length 168 aa; 161 aa overlap; query 8-168 aa; subject 4-163 aa similarity:fasta; SWALL:Q6D9D7 (EMBL:BX950851); Erwinia carotovora subsp. atroseptica SCRI1043; g/u mismatch-specific DNA glycosylase; muG; length 167 aa; 164 aa overlap; query 6-168 aa; subject 2-163 aa	G/U mismatch-specific uracil-DNA glycosylase	Uracil-DNA glycosylase superfamily	G/U mismatch-specific DNA glycosylase	G/U mismatch-specific DNA glycosylase	
ECOLI02957	Uncharacterized protein yqjH	Vulnibactin utilization protein	Putative uncharacterized protein STY3392	Putative iron transport/utilisation related protein	Iron utilization protein	Hypothetical protein yqjH	pseudo	Iron utilization protein	PMID: 8698519 PMID: 97000351 best DB hits: BLAST: embl:CAB59476.1; (AL132648) hypothetical protein SCI41.06; E=1e-31 swissprot:Q56743; VIUB_VIBVU VULNIBACTIN UTILIZATION PROTEIN VIUB; E=5e-31 swissprot:Q56646; VIUB_VIBCH VIBRIOBACTIN UTILIZATION PROTEIN VIUB; E=9e-30 COG: VC2210; COG2375 Siderophore-interacting protein; E=9e-31 vulnibactin utilization protein VIUB	glimmer prediction; similar to probable iron-chelator utilization protein - Deinococcus radiodurans (strain R1) ACCESSION A75620, possibly in operon (iron uptake) with SMA1746, SMA1745, SMA1742, SMA1741 conserved hypothetical protein	Iron utilization protein	Siderophore-interacting protein	Putative uncharacterized protein yqjH	Vulnibactin utilization protein viuB	Iron-chelator utilization protein	IPR007037: Siderophore-interacting protein putative transporter	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Iron utilization protein	vulnibactin utilization protein ViuB	Iron-chelator utilization protein, putative	Putative transporter	iron utilization protein	identified by match to protein family HMM PF04954; match to protein family HMM PF08021 iron utilization protein, putative	Siderophore-interacting protein	Siderophore-interacting protein	iron-chelator utilization protein	Code: P; COG: COG2375 conserved hypothetical protein	COG2375: Siderophore-interacting protein (ViuB).  PF04954. Siderophore-interacting protein	Code: P; COG: COG2375 conserved hypothetical protein	
ECOLI02958	Uncharacterized protein yqjI	Putative uncharacterized protein	Putative uncharacterized protein STY3393	Hypothetical protein yqjI	Putative uncharacterized protein yqjI	Transcriptional regulator, PadR family	Residues 1 to 207 of 207 are 100 pct identical to residues 1 to 207 of a 207 aa protein from Escherichia coli K12 ref: NP_417542.1 orf, conserved hypothetical protein	IPR005149: Transcriptional regulator PadR-like family putative transcriptional regulator	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	transcriptional regulator PadR-like family	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pr : putative regulator putative transcriptional regulator	Putative transcriptional regulator	conserved hypothetical protein	Hypothetical protein	Code: K; COG: COG1695 conserved hypothetical protein	Code: K; COG: COG1695 conserved hypothetical protein	Transcriptional regulator, PadR family	PadR-family transcriptional regulator	Code: K; COG: COG1695; orf conserved hypothetical protein	Transcriptional Regulator, PadR-like family	putative transcriptional regulator, PadR-like family	Putative uncharacterized protein	transcriptional regulator, PadR-like family	transcriptional regulator, PadR-like family	Putative uncharacterized protein yqjI	putative transcriptional regulator COG1695 Predicted transcriptional regulators	transcriptional regulator, PadR-like family PFAM: transcriptional regulator PadR family protein KEGG: rpc:RPC_3227 transcriptional regulator, PadR-like family	putative transcriptional regulator, PadR family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	
ECOLI02959	Aerotaxis receptor	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein McpD	Aerotaxis sensor receptor, flavoprotein	Aerotaxis receptor protein	Aerotaxis receptor	Aerotaxis receptor	Methyl-accepting chemotaxis protein	Probable methyl-accepting chemotaxis protein	Probable methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Aerotaxis sensor receptor, flavoprotein	Aer	similar to Escherichia coli K12 aerotaxis sensor receptor, flavoprotein gi: 1789453 (507 aa). BLAST with identity of 98% in 506 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	IPR000014: PAS domain; IPR001610: PAC motif; IPR003660: Histidine kinase, HAMP region;IPR004089: Bacterial chemotaxis sensory transducer;IPR004090: Methyl-accepting chemotaxis protein aerotaxis sensor receptor, senses cellular redox state or proton motive force	similar to Salmonella typhi Ty2 aerotaxis receptor protein aerotaxis receptor protein	Aerotaxis receptor, putative	Aerotaxis sensor receptor	PAS	PAS	PAS	methyl-accepting chemotaxis protein	Code: NT; COG: COG0840 aerotaxis sensor receptor, flavoprotein	Code: NT; COG: COG0840 aerotaxis sensor receptor, flavoprotein	chemotaxis sensory transducer	methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor	methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor	chemotaxis sensory transducer, Pas/Pac sensor	Code: NT; COG: COG0840 aerotaxis sensor receptor, flavoprotein	
ECOLI02960	Putrescine aminotransferase	Putrescine aminotransferase	Putrescine aminotransferase	Putrescine aminotransferase	Residues 1 to 496 of 496 are 99 pct identical to residues 1 to 496 of a 496 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289647.1 probable ornithine aminotransferase	IPR005814: Aminotransferase class-III Probable ornithine aminotransferase	similar to Salmonella typhi CT18 probable aminotransferase probable aminotransferase	Putrescine aminotransferase	Code: E; COG: COG4992 probable ornithine aminotransferase	Code: E; COG: COG4992 probable ornithine aminotransferase	Putrescine aminotransferase	Putrescine aminotransferase	aminotransferase class-III PFAM: aminotransferase class-III KEGG: aba:Acid345_3098 aminotransferase class-III	probable ornithine aminotransferase Code: E; COG: COG4992	putative ornithine aminotransferase	Acetylornithine, succinyldiaminopimelatetransamin ase	Aminotransferase class-III	Aminotransferase class-III	Putrescine aminotransferase	Probable ornithine aminotransferase	Putative uncharacterized protein	Ornithine--oxo-acid transaminase	Aminotransferase class-III	Putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent	Aminotransferase	Putrescine aminotransferase	Putrescine aminotransferase	Putrescine aminotransferase	Putative uncharacterized protein	
ECOLI02961	tRNA-binding protein ygjH	Methionyl-tRNA synthetase N-term homolog	TRNA-binding protein	112aa long hypothetical methionyl-tRNA synthetase	Putative uncharacterized protein TVG0523625	Methionyl-tRNA synthetase beta subunit	Fragment of probable methionine--tRNA ligase	RNA binding protein, emap domain	Partial methionyl-tRNA synthetase-matches COOH terminus	hypothetical methionyl-tRNA synthetase	Methionyl-tRNA synthetase	CsaA protein	Methionyl-tRNA synthetase-related protein	hypothetical protein	Hypothetical protein ygjH	protein secretion chaperonin CsaA	Methionyl-tRNA synthetase-related protein	Protein secretion chaperone	Protein secretion chaperone	Methionyl-tRNA synthetase-related protein	Putative tRNA synthetase	EMAP domain protein	Putative tRNA synthetase	putative tRNA-binding protein	Complete genome; segment 7/17	tRNA binding domain protein	protein secretion chaperonin CsaA	CsaA protein	Code: R; COG: COG0073 putative tRNA synthetase	
ECOLI02962	HTH-type transcriptional regulator ebgR	putative regulator of ebg operon	Ebg operon repressor	Product confidence : putative Gene name confidence : hypothetical putative transcriptional regulator, LacI family protein	Regulator of ebg operon	Regulator of ebg operon	EBG repressor-like protein	Residues 1 to 300 of 300 are 99 pct identical to residues 28 to 327 of a 327 aa protein from Escherichia coli O157:H7 ref: NP_311984.1 regulator of ebg operon	transcriptional regulator, LacI family	Ebg operon repressor	Code: K; COG: COG1609 regulator of ebg operon	Code: K; COG: COG1609 regulator of ebg operon	Code: K; COG: COG1609 regulator of ebg operon	Ebg operon repressor	Ebg operon repressor	transcription regulator of beta-galactosidase gene	regulator of ebg operon Code: K; COG: COG1609	Ebg operon repressor	Regulatory protein LacI	HTH-type transcriptional regulator EbgR	Transcriptional regulator, LacI family	DNA-binding transcriptional repressor	HTH-type transcriptional regulator EbgR	Transcriptional regulator, LacI family	HTH-type transcriptional regulator EbgR	LacI family transcriptional regulator LacR	Putative uncharacterized protein	HTH-type transcriptional regulator EbgR	HTH-type transcriptional regulator EbgR	
ECOLI02963	Evolved beta-galactosidase subunit alpha	Glycosyl hydrolase, family 2	Evolved beta-D-galactosidase, alpha-subunit	putative evolved beta-D-galactosidase, alpha subunit	Evolved beta-galactosidase alpha-subunit	Evolved beta-D-galactosidase, alpha subunit; cryptic gene	Evolved beta-D-galactosidase, alpha subunit; cryptic gene	Evolved beta-galactosidase, alpha-subunit	Residues 1 to 1028 of 1028 are 99 pct identical to residues 13 to 1042 of a 1042 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289650.1 evolved beta-D-galactosidase, alpha subunit; cryptic gene	beta-galactosidase	beta-galactosidase	beta-galactosidase	glycosyl hydrolase, family 2	Code: G; COG: COG3250 evolved beta-D-galactosidase, alpha subunit; cryptic gene	cryptic gene; Code: G; COG: COG3250 evolved beta-D-galactosidase, alpha subunit	Evolved beta-galactosidase alpha-subunit	Evolved beta-galactosidase alpha-subunit	Beta-galactosidase	evolved beta-galactosidase alpha-subunit identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929	evolved beta-D-galactosidase, alpha subunit Code: G; COG: COG3250	Beta-galactosidase (Lactase) Beta-galactosidase (Lactase) (BGAL); go_component: beta-galactosidase complex; go_function: hydrolase activity, hydrolyzing O-glycosyl compounds; beta-galactosidase activity; go_process: carbohydrate metabolism	Beta-galactosidase	evolved beta-galactosidase alpha-subunit	Botrytis cinerea hypothetical protein	hypothetical protein	Beta-galactosidase, subunit alpha	Glycoside hydrolase family 2 TIM barrel	Cryptic beta-D-galactosidase, alpha subunit	Beta-galactosidase, subunit alpha	
ECOLI02964	Evolved beta-galactosidase subunit beta	putative evolved beta-D-galactosidase, beta subunit; cryptic gene	Evolved beta-galactosidase subunit beta	Evolved beta-D-galactosidase, beta subunit; cryptic gene	Evolved beta-D-galactosidase, beta subunit; cryptic gene	Beta-galactosidase, beta subunit	Residues 1 to 149 of 149 are 99 pct identical to residues 1 to 149 of a 149 aa protein from Escherichia coli K12 ref: NP_417548.1 evolved beta-D-galactosidase, beta subunit; cryptic gene	evolved beta-galactosidase beta-subunit	Code: G; COG: COG2731 evolved beta-D-galactosidase, beta subunit; cryptic gene	cryptic gene; Code: G; COG: COG2731 evolved beta-D-galactosidase, beta subunit	Evolved beta-galactosidase beta-subunit	Evolved beta-D-galactosidase beta subunit	evolved beta-D-galactosidase, beta subunit Code: G; COG: COG2731	evolved beta-D-galactosidase, beta subunit	Evolved beta-galactosidase, beta subunit	Putative uncharacterized protein	Cryptic beta-D-galactosidase, beta subunit	Evolved beta-galactosidase, beta subunit	Putative uncharacterized protein	Evolved beta-galactosidase, beta subunit	Putative uncharacterized protein	Evolved beta-galactosidase beta-subunit	Evolved beta-galactosidase, beta subunit	Evolved beta-D-galactosidase beta subunit	Cryptic beta-D-galactosidase, beta subunit	Cryptic beta-D-galactosidase, beta subunit	Cryptic beta-D-galactosidase, beta subunit	Cryptic beta-D-galactosidase, beta subunit	Cryptic beta-D-galactosidase, beta subunit	
ECOLI02965	Inner membrane transporter ygjI	Amino acid permease	Membrane-spanning transporter protein	Amino acid permease family protein	Putative oxidoreductase	putative oxidoreductase	Hypothetical transporter ygjI	Putative oxidoreductase	Putative oxidoreductase	Putative oxidoreductase	Residues 1 to 477 of 477 are 99 pct identical to residues 1 to 477 of a 477 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289652.1 putative oxidoreductase	similar to amino acid transporter hypothetical protein	conserved gene amino acid antiporter	similar to amino acid transporter hypothetical protein	amino acid permease	Code: E; COG: COG0531 putative oxidoreductase	Hypothetical transporter YgjI	Amino acid permease identified by match to protein family HMM PF00324	amino acid permease family protein identified by match to protein family HMM PF00324	Putative oxidoreductase	inner membrane transporter YgjI identified by match to protein family HMM PF00324	putative amino acid permease	putative oxidoreductase Code: E; COG: COG0531	Amino acid transporter	Amino acid transporter	putative oxidoreductase	Amino acid antiporter	Putative amino acid permease precursor	Amino acid permease family protein	
ECOLI02966	Uncharacterized protein ygjJ	Putative uncharacterized protein ygjJ	probable transcriptional regulator SyrB	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ygjJ	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Probable transcriptional regulator SyrB	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ygjJ	Putative uncharacterized protein ygjJ	Putative uncharacterized protein ygjJ	Putative uncharacterized protein ygjJ	Putative uncharacterized protein ygjJ	Predicted protein	Putative uncharacterized protein ygjJ	YgjJ protein	Conserved protein	Conserved protein	conserved predicted protein	
ECOLI02967	Uncharacterized protein ygjK	Putative uncharacterized protein VV2646	Hypothetical protein ygjK	Putative isomerase	Putative isomerase	Putative isomerase	Residues 1 to 783 of 783 are 99 pct identical to residues 1 to 783 of a 783 aa protein from Escherichia coli K12 ref: NP_417551.1 putative isomerase	putative glucosyl hydrolase precursor	putative isomerase	putative isomerase	Putative glucosyl hydrolase	cell wall surface anchor family protein identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167	Putative uncharacterized protein ygjK	conserved hypothetical protein	glycoside hydrolase, family 37 PFAM: glycoside hydrolase, family 37 KEGG: cpr:CPR_0360 cell wall surface anchor family protein	putative glycosyl hydrolase	cell wall surface anchor family protein KEGG: cpr:CPR_0360 cell wall surface anchor family protein	PFAM: glycoside hydrolase family 37 KEGG: slo:Shew_3745 glycoside hydrolase, family 37 glycoside hydrolase family 37	KEGG: slo:Shew_3745 glycoside hydrolase, family 37 glycoside hydrolase, family 37	Putative uncharacterized protein	Putative isomerase precursor	Glycoside hydrolase family 37	Predicted glycosyl hydrolase	Putative uncharacterized protein	Putative isomerase precursor	Putative uncharacterized protein	Putative uncharacterized protein	Lipoprotein, putative	Putative uncharacterized protein	
ECOLI02968	2,4-dienoyl-CoA reductase	2,4-dienoyl-CoA reductase FadH1	pseudo	Putative 2,4-dienoyl-CoA reductase	2,4-dienoyl-CoA reductase	2,4-dienoyl-CoA reductase	Putative 2,4-dienoyl-coA reductase	2,4-dienoyl-CoA reductase	Putative NADPH dehydrogenase	NADH:flavin oxidoreductase, possible NADH oxidase	SC4G1.32, fadH, 2,4-dienoyl-CoA reductase [NADPH], len: 671 aa; highly similar to SW:FADH_ECOLI (EMBL:U93405) Escherichia coli 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) FadH, 671 aa; fasta scores: opt: 2871 z-score: 3039.3 E(): 0; 62.8% identity in 667 aa overlap. Contains Pfam match to entry PF00724 oxidored_FMN, NADH:flavin oxidoreductase / NADH oxidase family 2,4-dienoyl-CoA reductase [NADPH]	Residues 1 to 672 of 672 are 98 pct identical to residues 1 to 672 of a 672 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289655.1 putative NADPH dehydrogenase	2,4-dienoyl-CoA reductase	2,4-dienoyl-CoA reductase	2,4-dienoyl-CoA reductase FadH1	IPR000205: NAD-binding site; IPR000759: Adrenodoxin reductase; IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I;IPR001155: NADH:flavin oxidoreductase/NADH oxidase;IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2,4-dieonyl-coa reductase	similar to Salmonella typhimurium 2,4-dieonyl-coa reductase 2,4-dieonyl-coa reductase	2,4-dienoyl-CoA reductase	2,4-dienoyl-CoA reductase	Evidence 2b : Function of strongly homologous gene; Product type e : enzyme 2,4-dienoyl-CoA reductase	2,4-dienoyl-CoA reductase FadH	2,4-dieonyl-coa reductase	2,4-dienoyl-CoA reductase	identified by similarity to SP:P42593; match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF07992 2,4-dienoyl-CoA reductase	24-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) (24- dienoyl coenzyme A reductase).,Catalyzes the NADP- dependent reduction of 24-dienoyl- CoA to yield trans-2- enoyl-CoA. 2,4-dienoyl-CoA reductase	identified by match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF07992 2,4-dienoyl-CoA reductase	identified by match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF07992 2,4-dienoyl-CoA reductase FadH	NADH:flavin oxidoreductase/NADH oxidase:FAD-dependent pyridine nucleotide-disulphide oxidoreductase:HI0933-like protein	NADH:flavin oxidoreductase/NADH oxidase:FAD-dependent pyridine nucleotide-disulphide oxidoreductase	
ECOLI02969	Uncharacterized HTH-type transcriptional regulator ygjM	Putative HTH-type transcriptional regulator ygjM	HTH domain DNA binding protein	Putative DNA-binding protein	Putative uncharacterized protein ygjM	Residues 1 to 138 of 138 are 100 pct identical to residues 1 to 138 of a 138 aa protein from Escherichia coli K12 ref: NP_417553.1 orf, conserved hypothetical protein	Similar to unknown protein YgjM of Escherichia coli	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	Code: K; COG: COG5499 conserved hypothetical protein	Code: K; COG: COG5499 conserved hypothetical protein	Code: K; COG: COG5499; orf conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein Code: K; COG: COG5499	putative DNA-binding protein KEGG: eca:ECA0367 putative DNA-binding protein	Putative DNA-binding protein	Putative DNA-binding protein	Helix-turn-helix DNA-binding domain protein	Helix-turn-helix domain protein	Predicted DNA-binding transcriptional regulator	Helix-turn-helix DNA-binding domain protein	Helix-turn-helix domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Helix-turn-helix DNA-binding domain protein	Putative uncharacterized protein	Sea41	Sea41	Sea41	
ECOLI02970	Uncharacterized protein ygjN	Hypothetical protein	Putative uncharacterized protein	Uncharacterized protein ygjN	Residues 1 to 96 of 96 are 100 pct identical to residues 9 to 104 of a 104 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289657.1 orf, conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG4680 conserved hypothetical protein	Code: S; COG: COG4680 conserved hypothetical protein	Putative uncharacterized protein, YgjN-like	conserved hypothetical protein Code: S; COG: COG4680	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein, YgjN-like protein precursor	Putative uncharacterized protein	Sea40	Putative uncharacterized protein ygjN	Putative uncharacterized protein	Putative uncharacterized protein	YgjN protein	Conserved protein	Conserved protein	conserved hypothetical protein	Putative uncharacterized protein	
ECOLI02971	Ribosomal RNA large subunit methyltransferase G	Ribosomal RNA large subunit methyltransferase G	16S RNA G1207 methylase RsmC	Ribosomal RNA large subunit methyltransferase G	Hypothetical methyltransferase	Putative ribosomal RNA small subunit methyltransferase D	Ribosomal RNA large subunit methyltransferase G	Putative uncharacterized protein	Ribosomal RNA large subunit methyltransferase G	Ribosomal RNA large subunit methyltransferase G	Putative uncharacterized protein	Conserved protein	Ribosomal RNA large subunit methyltransferase G	Ribosomal RNA large subunit methyltransferase G	Putative uncharacterized protein	SCG20A.21, hypothetical protein, len: 407 aa; similar to SW:YGJO_ECOLI (EMBL:U18997) Escherichia coli hypothetical 43.4 kD protein in EbgC-UxaA intergenic region Ygjo, 388 aa; fasta scores: opt: 956 z-score: 1103.1 E(): 0; 44.0% identity in 373 aa overlap conserved hypothetical protein SCG20A.21	Ribosomal RNA large subunit methyltransferase G	Residues 1 to 378 of 378 are 98 pct identical to residues 1 to 378 of a 378 aa protein RSMD_ECOLI sp: P42596 Putative ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N2-)-methyltransferase) (16S rRNA m2G966 methyltransferase)	Ribosomal RNA large subunit methyltransferase G	IPR000051: SAM (and some other nucleotide) binding motif; IPR002052: N-6 Adenine-specific DNA methylase; IPR007848: Methyltransferase small paral putative methyltransferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Ribosomal RNA large subunit methyltransferase G	16S rRNA m(2)G 966 methyltransferase	Ribosomal RNA large subunit methyltransferase G	Ribosomal RNA large subunit methyltransferase G	identified by similarity to SP:P42596; match to protein family HMM PF05175 ribosomal RNA small subunit methyltransferase D	identified by match to protein family HMM PF05175 16S rRNA methylase RsmC	identified by match to protein family HMM PF05175 nucleotide methyltransferase, putative	rRNA (guanine-N(2)-)-methyltransferase	
ECOLI02972	Uncharacterized protein ygjP	Putative uncharacterized protein	Putative uncharacterized protein	Predicted metal-dependent hydrolase	Putative uncharacterized protein STY3401	Putative uncharacterized protein	putative metal-dependent hydrolase	Hypothetical protein ygjP	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP1323	Putative uncharacterized protein ygjP	Predicted metal-dependent hydrolase	Residues 1 to 179 of 179 are 98 pct identical to residues 1 to 179 of a 179 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289659.1 orf, conserved hypothetical protein	Predicted metal-dependent hydrolase	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative metal-dependent hydrolase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Putative metal-dependent hydrolase	conserved hypothetical protein	identified by similarity to OMNI:NTL01YP0562 conserved hypothetical protein	conserved hypothetical protein	
ECOLI02973	Uncharacterized protein ygjQ	Putative uncharacterized protein	Putative integral membrane protein	Putative uncharacterized protein STY3402	All7616 protein	Putative uncharacterized protein	Hypothetical protein ygjQ	Putative uncharacterized protein ygjQ	SC7A8.11, possible integral membrane protein, len: 228 aa; similar to SW:YGJQ_ECOLI (EMBL:U18997) Escherichia coli hypothetical 25,5 kD protein, 230 aa; fasta scores: opt: 405 z-score: 493.9 E(): 4e-20; 37.7% identity in 207 aa overlap and to SW:SANA_ECOLI (EMBL:Z47804) Escherichia coli SanA protein, 239 aa; fasta scores: opt: 328 z-score: 401.5 E(): 5.7e-15; 34.7% identity in 170 aa overlap.  Contains possible N-terminal region signal peptide sequence putative integral membrane protein	Residues 1 to 230 of 230 are 97 pct identical to residues 1 to 230 of a 230 aa protein from Escherichia coli K12 ref: NP_417557.1 orf, conserved hypothetical protein	putative integral membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Similar to Shigella flexneri ORF, conserved hypothetical protein YgjQ or SF3126 SWALL:AAN44598 (EMBL:AE015324) (230 aa) fasta scores: E(): 4e-30, 47.76% id in 201 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri SanA protein or B2144 or C2677 or Z3399 or ECS3036 or SF2229 or S2358 SWALL:SANA_ECOLI (SWALL:P33017) (239 aa) fasta scores: E(): 2.2e-27, 40.56% id in 212 aa putative transport-related membrane protein	Putative integral membrane protein	Code: S; COG: COG2949 conserved hypothetical protein	Code: S; COG: COG2949 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ygjQ	sanA protein identified by match to protein family HMM PF02698	conserved hypothetical protein Code: S; COG: COG2949	conserved hypothetical protein	Possible membrane protein	Putative SanA protein	Predicted thioredoxin-like protein	Putative SanA protein	Putative uncharacterized protein precursor	Putative SanA protein	Putative uncharacterized protein	Putative integral membrane protein	
ECOLI02974	Uncharacterized oxidoreductase ygjR	Oxidoreductase	Possible oxidoreductase	Lmo1726 protein	putative oxidoreductase ygjR	Hypothetical oxidoreductase ygjR	Oxidoreductase, Gfo/Idh/MocA family	Putative oxidoreductase	PMID: 10086842 best DB hits: BLAST: pir:T04014; hypothetical protein F17A8.20 - Arabidopsis thaliana; E=4e-24 ddbj:BAB07562.1; (AP001520) oxidoreductase [Bacillus halodurans]; E=8e-21 gb:AAD39613.1; AC007454_12 (AC007454) Similar to gb D14605 AX110P; E=2e-20 COG: BH3843; COG0673 Predicted dehydrogenases and related proteins; E=8e-22 PFAM: PF01408; Oxidoreductase family, NAD-bin; E=4.8e-38 oxidoreductase	hypothetical conserved protein	Putative oxidoreductase	Putative oxidoreductase	Putative uncharacterized protein ygjR	Oxioreductase	Lin1837 protein	Residues 1 to 334 of 338 are 98 pct identical to residues 1 to 334 of a 334 aa protein from Escherichia coli K12 ref: NP_417558.1 orf, conserved hypothetical protein	Putative MocA-family oxidoreductase	Oxidoreductase	identified by match to protein family HMM PF01408; match to protein family HMM PF02894 oxidoreductase, Gfo/Idh/MocA family	Oxidoreductase protein	Biological Process: electron transport (GO:0006118), Biological Process: metabolism (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491) putative oxidoreductase	putative dehydrogenase	Oxidoreductase	IPR000683: Oxidoreductase, N-terminal putative dehydrogenase	similar to Salmonella typhi CT18 possible oxidoreductase possible oxidoreductase	Possible MocA-family oxidoreductase	identified by match to protein family HMM PF01408 oxidoreductase, Gfo/Idh/MocA family	Putative Oxidoreductase	NAD-dependent oxidoreductase	
ECOLI02975	Inner membrane protein alx	Export protein	Export protein	Uncharacterized membrane protein RC1219	Putative uncharacterized protein	Putative transmembrane transport protein	Inner membrane protein alx	Putative tellurium resistance protein	TerC-like protein	Integral membrane protein, TerC family	Hypothetical transmembrane transportprotein	Putative transport protein	Protein alx	identified by match to protein family HMM PF03741 tellurium resistance protein, putative	TerC family protein	Putative uncharacterized protein VCA0546	Putative membrane protein	TerC family membrane protein	Uncharacterized membrane protein BUsg_160	hypothetical protein	Putative transmembrane transport protein	Inner membrane protein alx	Putative uncharacterized protein	Membrane protein TerC	Permease of the major facilitator superfamily	Residues 1 to 319 of 320 are 100 pct identical to residues 1 to 319 of a 321 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289662.1 putative transport protein	Inner membrane protein alx	Similar to putative transport proteins hypothetical protein	conserved gene drug efflux protein	
ECOLI02976	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Sodium/dicarboxylate symporter	Serine/threonine transporter sstT	Serine/threonine transporter sstT	putative sodium/dicarboxylate symporter	Hypothetical symporter ygjU	Serine/threonine transporter sstT	Sodium/dicarboxylate symporter	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Residues 1 to 414 of 414 are 99 pct identical to residues 1 to 414 of a 414 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289663.1 putative transport protein	Serine/threonine transporter sstT	Serine/threonine transporter sstT	Serine/threonine sodium symporter	identified by match to protein family HMM PF00375 sodium/dicarboxylate symporter	IPR001991: Sodium:dicarboxylate symporter; IPR002016: Haem peroxidase putative dicarboxylate permease	similar to Salmonella typhi CT18 probable membrane transport protein probable membrane transport protein	Serine/threonine transporter sstT	identified by match to PFAM protein family HMM PF00375 sodium:dicarboxylate symporter family protein	Serine/threonine transporter sstT	Putative symport protein	
ECOLI02977	Inner membrane protein ygjV	Hypothetical protein ygjV	Putative membrane protein	Putative uncharacterized protein VPA1709	Putative uncharacterized protein ygjV	Putative uncharacterized protein	Residues 1 to 183 of 183 are 100 pct identical to residues 1 to 183 of a 183 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289664.1 orf, conserved hypothetical protein	Putative membrane protein	Putative conserved membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein ygjV	conserved hypothetical protein KEGG: csa:Csal_2472 hypothetical protein	Membrane protein	Putative membrane protein	conserved hypothetical protein	Membrane protein	conserved hypothetical protein KEGG: ppr:PBPRB1884 hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein ygjV	Putative inner membrane protein	Conserved inner membrane protein	Putative membrane protein	Putative inner membrane protein	Putative uncharacterized protein	Putative inner membrane protein	
ECOLI02978	Altronate hydrolase	Putative uncharacterized protein	Putative altronate hydrolase, uxaA	Altronate hydrolase	Altronate hydrolase	PMID: 9278503 PMID: 3038546 best DB hits: BLAST: ddbj:BAB04209.1; (AP001508) altronate hydrolase [Bacillus; E=6e-65 gb:AAG58224.1; AE005539_1 (AE005539) altronate hydrolase; E=2e-64 swissprot:P42604; UXAA_ECOLI ALTRONATE HYDROLASE (ALTRONIC ACID; E=2e-63 COG: BH0490; COG2721 Altronate dehydratase; E=6e-66 altronate hydrolase	Altronate hydrolase	Putative altronate dehydratase	Altronate hydrolase	Residues 1 to 495 of 495 are 99 pct identical to residues 1 to 495 of a 495 aa protein from Escherichia coli K12 ref: NP_417562.1 altronate hydrolase	Altronate hydrolase	Putative altronate hydrolase (Altronic acid hydratase) protein	InterProMatches:IPR007389, IPR007392; Molecular Function: hydro-lyase activity (GO:0016836) altronate hydrolase	Altronate hydrolase	Altronate dehydratase UxaA protein	Hydrolase, UxaA family	Altronate dehydratase	Code: G; COG: COG2721 altronate hydrolase	identified by similarity to GB:AAL19601.1; match to protein family HMM PF04295 hydrolase, UxaA family	contains both N- and C-terminal domains of altronate hydrolase altronate hydrolase	D-altronate dehydratase	Code: G; COG: COG2721 altronate hydrolase	Altronate dehydratase	Altronate hydrolase	Altronate dehydratase	Altronate hydrolase	Altronate dehydratase	Altronate hydrolase	altronate hydrolase	
ECOLI02979	Uronate isomerase	Uronate isomerase	Uronate isomerase	Uronate isomerase	Uronate isomerase	Uronate isomerase	Uronate isomerase	Uronate isomerase	Uronate isomerase	Hypothetical uronate isomerase	Uronate isomerase	similar to GP:15140816, GB:M13267, GB:X02317, GB:K00065, GB:X01662, GB:X01780, GB:X01781, GB:X01782, GB:X01783, GB:X01784, GB:X81859, GB:X95228, SP:P00441, PID:1237406, PID:1237407, PID:1335314, PID:1335315, PID:1335317, PID:1335318, PID:338276, PID:36535, PID:36542, and PID:939773; identified by sequence similarity; putative glucuronate isomerase, putative	Uronate isomerase	Product confidence : putative Gene name confidence : putative putative glucuronate isomerase (uronic isomerase) protein	Uronate isomerase	Uronate isomerase	Uronate isomerase	Uronate isomerase	CDS_ID OB0367; glucuronate isomerase uronate isomerase	similar to AF331922-5|AAK01134.1| percent identity: 44 in 462 aa putative uronate isomerase	hexuronic acid isomerase HrmI	Uronate isomerase	Glucuronate isomerase	Uronate isomerase	Uronate isomerase	Uronate isomerase	Residues 22 to 491 of 491 are 100 pct identical to residues 1 to 470 of a 470 aa protein from Escherichia coli K12 ref: NP_417563.1 uronate isomerase	Uronate isomerase	Uronate isomerase	
ECOLI02980	Hexuronate transporter	highly similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1;	Putative uncharacterized protein TVG1435680	Hexuronate transporter	go_component: plasma membrane [goid 0005886]; go_function: allantoate transporter activity [goid 0015124]; go_process: allantoate transport [goid 0015719] conserved hypothetical protein	Galacturonate transporter	MFS transporter, phthalate permease family	Hexuronate transporter	Residues 4 to 467 of 467 are 100 pct identical to residues 9 to 472 of a 472 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289667.1 transport of hexuronates	ExuT transport protein	Probable hexuronate transporter transmembrane protein	ExuT transport protein, MFS Superfamily. 	identified by match to protein family HMM PF00083; match to protein family HMM PF07690 MFS transporter, phthalate permease family	General substrate transporter:TonB box, N-terminal	Code: GEPR; COG: COG0477 transport of hexuronates	Major facilitator superfamily MFS_1	Code: GEPR; COG: COG0477 transport of hexuronates	Hexuronate transporter	ExuT transport protein precursor	Hexuronate transporter	Conjugated Bile Salt Transporter	ExuT transport protein precursor	Major facilitator superfamily (MFS) metabolite(Phthalate/hexuronate)/H+ symporter	ExuT transport protein precursor	major facilitator superfamily MFS_1 transporter	transport of hexuronates Code: GEPR; COG: COG0477	Nitrite transporter precursor	hexuronate transporter ExuT	Botrytis cinerea hypothetical protein	
ECOLI02981	Exu regulon transcriptional regulator	Hypothetical exu regulon transcriptional regulator	Exu regulon transcriptional regulator	Exu regulon transcriptional regulator	Exu regulon transcriptional regulator	Residues 1 to 258 of 258 are 100 pct identical to residues 6 to 263 of a 263 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289668.1 negative regulator of exu regulon, exuT, uxaAC, and uxuB	Exu regulon transcriptional regulator	Exu regulon transcriptional regulator	Code: K; COG: COG2186 negative regulator of exu regulon, exuT, uxaAC, and uxuB	negative regulator of exu regulon, exuT, uxaAC, and uxuB; Code: K; COG: COG2186 ExuR	Transcriptional regulator, GntR family	putative exu regulon transcriptional regulator	transcriptional regulator, GntR family	Code: K; COG: COG2186 negative regulator of exu regulon, exuT, uxaAC, and uxuB	Exu regulon transcriptional regulator	Exu regulon transcriptional regulator	1,4-alpha-glucan branching enzyme	Exu regulon transcriptional regulator	GntR domain protein	Exu regulon transcriptional regulator	GntR domain protein PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: bur:Bcep18194_B1359 transcriptional regulator, GntR family	Exu regulon transcriptional regulator	GntR-family transcriptional regulator	Exu regulon transcriptional regulator Code: K; COG: COG2186	Exu regulon transcriptional regulator	GntR domain protein PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: dvu:DVU2785 transcriptional regulator, GntR family	negative regulator of Exu regulon, ExuT, UxaAC, and UxuB	Regulatory protein GntR HTH	Transcriptional regulator, GntR family	
ECOLI02982	Inner membrane protein yqjA	Hypothetical conserved transmembrane protein in the DedA family	Putative uncharacterized protein Ta0578	Alkaline phosphatase-like protein	Putative membrane protein	Lmo1870 protein	Inner membrane protein yqjA	Putative DedA-family membrane protein	Alkaline phosphatase	alkaline phosphatase	Inner membrane protein yqjA	CDS_ID OB2407 alkaline phosphatase	similar to AL356892-18|CAB92836.1| percent identity: 44 in 230 aa conserved hypothetical protein	Alkaline phosphatase like protein	Lin1984 protein	Residues 1 to 220 of 220 are 100 pct identical to residues 1 to 220 of a 220 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289669.1 orf, conserved hypothetical protein	Putative DedA-family membrane protein	Alkaline phosphatase	YqjA protein	Similar to putative DedA family	identified by match to protein family HMM PF00597 DedA family protein	Alkaline phosphatase	Uncharacterized DedA family conserved membrane protein	IPR000252: DedA family putative DedA family, membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	hypothetical protein, similar to alkaline phosphatase	Putative DedA-family membrane protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2590 DedA family protein	hypothetical protein, similar to alkaline phosphatase	
ECOLI02983	Uncharacterized protein yqjB	Hypothetical protein yqjB	Putative exported protein	Putative uncharacterized protein yqjB	Residues 1 to 127 of 127 are 99 pct identical to residues 1 to 127 of a 127 aa protein from Escherichia coli K12 ref: NP_417567.1 orf, conserved hypothetical protein	Putative membrane protein	putative outer membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative membrane protein	Putative outer membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein precursor	Putative uncharacterized protein yqjB	Membrane protein precursor	conserved hypothetical protein	Membrane protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yqjB	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	
ECOLI02984	Protein yqjC	Putative exported protein	Protein yqjC	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Putative exported protein	Putative uncharacterized protein yqjC	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 2367195 (128 aa). BLAST with identity of 99% in 123 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	Putative exported protein	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative exported protein	Putative uncharacterized protein	Putative periplasmic protein	identified by match to protein family HMM PF06476 Protein yqjC precursor	Protein of unknown function DUF1090	conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function ; putative signal peptide	conserved hypothetical protein	conserved hypothetical protein	Protein of unknown function DUF1090	orf conserved hypothetical protein	Putative uncharacterized protein precursor	Protein YqjC	Hypothetical protein precursor	Hypothetical protein precursor	
ECOLI02985	Uncharacterized protein yqjD	Putative uncharacterized protein STY3409	Hypothetical protein yqjD	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Uncharacterized protein yqjD	Residues 1 to 88 of 88 are 100 pct identical to residues 14 to 101 of a 101 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289672.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to putative membrane protein YqjD of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative membrane associated protein	Putative uncharacterized protein	Putative inner membrane protein	identified by match to protein family HMM PF05957 conserved hypothetical protein	identified by match to protein family HMM PF05957 conserved hypothetical protein	protein of unknown function DUF883	Code: S; COG: COG4575 conserved hypothetical protein	Code: S; COG: COG4575 conserved hypothetical protein	Protein of unknown function DUF883, ElaB	protein of unknown function DUF883, ElaB	Protein of unknown function DUF883 ElaB	Code: S; COG: COG4575; orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein yqjD	Membrane protein	
ECOLI02986	Inner membrane protein yqjE	Hypothetical protein yqjE	Putative membrane protein	Inner membrane protein yqjE	Residues 1 to 134 of 134 are 100 pct identical to residues 24 to 157 of a 157 aa protein from Escherichia coli gb: AAA57903.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YqjE of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Putative inner membrane protein	Code: S; COG: COG5393 conserved hypothetical protein	Code: S; COG: COG5393 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG5393; orf conserved hypothetical protein	Membrane protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yqjE	membrane protein KEGG: bur:Bcep18194_A3903 membrane protein	Hypothetical protein	membrane protein KEGG: bcn:Bcen_0327 membrane protein	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG5393	Hypothetical protein	conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein yqjE	Putative uncharacterized protein	
ECOLI02987	Uncharacterized protein yqjK	Hypothetical protein yqjK	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 99 of 99 are 96 pct identical to residues 1 to 99 of a 99 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289674.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yqjK	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein yqjK	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI02988	Inner membrane protein yqjF	Putative uncharacterized protein	Putative membrane protein	All3051 protein	conserved hypothetical protein	Hypothetical protein yqjF	Putative membrane protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	DoxD-like family protein	Putative uncharacterized protein yqjF	similar to AE004713-1|AAG06252.1| percent identity: 31 in 132 aa conserved hypothetical protein	Residues 1 to 128 of 128 are 76 pct identical to residues 1 to 160 of a 160 aa protein from Escherichia coli O157:H7 ref: NP_312010.1 orf, conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Similar to putative membrane protein YqjF of Escherichia coli	Conserved hypothetical membrane protein	IPR007301: DoxD-like protein putative membrane-associated protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative membrane protein	transporter	Putative membrane-associated protein	Terminal quinol oxidase membrane protein subunit similar to DoxD of Acidianus spp.	DoxD-like family protein	Code: S; COG: COG2259 conserved hypothetical protein	Code: S; COG: COG2259 conserved hypothetical protein	DoxX	DoxX	DoxX	
ECOLI02989	Uncharacterized protein yqjG	similar to tr|O94524 Schizosaccharomyces pombe Protein with glutathione S transferase domain, start by similarity	Glutathione S-transferase omega-like 2 [Source:GeneDB_Spombe;Acc:SPCC1281.07c]	similar to sp|P36156 Saccharomyces cerevisiae YKR076w ECM4 involved in cell wall biogenesis and architecture, start by similarity	Slr0605 protein	Putative uncharacterized protein	Vng2281c	Putative glutathione S-transferase	Putative uncharacterized protein	Glutathione S-transferase C terminus	Putative uncharacterized protein	Predicted glutathione S-transferase	Putative uncharacterized protein	Putative uncharacterized protein STY3413	Predicted glutathione S-transferase	putative glutathione S-transferase	glutathione S-transferase	identified by match to PFAM protein family HMM PF00043 glutathione S-transferase domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Glutathione S-transferase domain protein	hypothetical protein	Putative uncharacterized protein	Putative transferase	Putative glutathione S-transferase	Putative uncharacterized protein	Putative transferase	similar to AX065613-1|CAC26046.1| percent identity: 90 in 358 aa conserved hypothetical protein	
ECOLI02990	Inner membrane protein yhaH	Putative membrane protein	Hypothetical protein yhaH	Putative uncharacterized protein	Inner membrane protein yhaH	Residues 8 to 127 of 129 are 99 pct identical to residues 1 to 120 of a 121 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289677.1 putative cytochrome	IPR008523: Protein of unknown function DUF805 putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	similar to unknown protein	Code: S; COG: COG3152 putative cytochrome	Code: S; COG: COG3152 putative cytochrome	Code: S; COG: COG3152 putative cytochrome	Putative uncharacterized protein	Putative uncharacterized protein yhaH	Hypothetical protein	putative cytochrome Code: S; COG: COG3152	putative cytochrome	Hypothetical protein	Putative uncharacterized protein	Putative cytochrome	Putative uncharacterized protein	Putative inner membrane protein YhaH	Putative uncharacterized protein	Predicted inner membrane protein	Putative inner membrane protein YhaH	Putative uncharacterized protein	Putative inner membrane protein YhaH	Putative uncharacterized protein	
ECOLI02991	Inner membrane protein yhaI	Putative uncharacterized protein	Lmo0672 protein	Putative uncharacterized protein	Putative uncharacterized protein	Inner membrane protein yhaI	hypothetical protein	Integral membrane protein	Putative uncharacterized protein	unknown protein	Putative uncharacterized protein	identified by match to protein family HMM PF05656 conserved hypothetical protein	Unknown, predicted membrane protein (TMS3)	conserved hypothetical protein	identified by match to protein family HMM PF05656 conserved hypothetical protein	conserved hypothetical protein	Protein of unknown function DUF805	Code: S; COG: COG3152 putative cytochrome	Code: S; COG: COG3152 putative cytochrome	conserved hypothetical protein	protein of unknown function DUF805 PFAM: protein of unknown function DUF805 KEGG: bur:Bcep18194_A3369 protein of unknown function DUF805	Hypothetical protein	Hypothetical protein	protein of unknown function DUF805 PFAM: protein of unknown function DUF805 KEGG: sfr:Sfri_4038 protein of unknown function DUF805	Complete genome	conserved hypothetical protein KEGG: cps:CPS_3606 hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	
ECOLI02992	Uncharacterized HTH-type transcriptional regulator yhaJ	Transcriptional regulator	Possible LysR-family transcriptional regulator	hypothetical transcriptional regulator	Hypothetical transcriptional regulator yhaJ	Transcriptional regulator, LysR family	LysR-family transcriptional regulator	Transcriptional regulator, LysR family	Uncharacterized HTH-type transcriptional regulator yhaJ	Transcriptional regulator	Residues 1 to 298 of 298 are 99 pct identical to residues 1 to 298 of a 298 aa protein from Escherichia coli O157:H7 ref: NP_312014.1 putative transcriptional regulator LYSR-type	LysR-family transcriptional regulatory protein	Probable transcriptional regulator transcription regulator protein	Similar to LYSR-type transcriptional regulator YhaJ of Escherichia coli	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	Transcriptional regulator	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark transcriptional regulator	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 possible LysR-family transcriptional regulator possible LysR-family transcriptional regulator	Transcriptional regulator	LysR-family transcriptional regulatory protein	Putative LysR family transcriptional regulator	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	regulatory protein, LysR:LysR, substrate-binding	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type r : regulator putative transcriptional regulator (LysR family)	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	transcriptional regulator, LysR family	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Putative transcriptional regulator, LysR family	
ECOLI02993	Pirin-like protein yhaK	Hypothetical protein yhaK	conserved hypothetical protein	Putative uncharacterized protein	Pirin-like protein yhaK	Residues 1 to 233 of 233 are 99 pct identical to residues 1 to 233 of a 233 aa protein from Escherichia coli K12 ref: NP_417577.1 orf, conserved hypothetical protein	Pirin-related protein	Similar to unknown protein YhaK of Escherichia coli	IPR003829: Pirin, N-terminal putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	Code: R; COG: COG1741 conserved hypothetical protein	Code: R; COG: COG1741 conserved hypothetical protein	Code: R; COG: COG1741; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yhaK	pirin domain protein PFAM: pirin domain protein KEGG: pol:Bpro_2901 pirin-like	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: R; COG: COG1741	Hypothetical protein	putative pirin-related protein	Pirin domain protein domain protein	Putative uncharacterized protein yhaK	Putative uncharacterized protein	Pirin family protein	Pirin domain protein	
ECOLI02994	Uncharacterized protein yhaL	Hypothetical protein yhaL	Putative uncharacterized protein yhaL	Residues 1 to 56 of 56 are 96 pct identical to residues 1 to 56 of a 56 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289681.1 orf, conserved hypothetical protein	putative cytoplasmic protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhaL	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein yhaL	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative cytoplasmic protein	
ECOLI02995	UPF0597 protein yhaM	UPF0597 protein MJ1025	UPF0597 protein GSU1527	UPF0597 protein BT_2080	UPF0597 protein MMP1468	UPF0597 protein CPE0806	UPF0597 protein yhaM	UPF0597 protein DP0591	UPF0597 protein BF3772	hypothetical inner membrane protein	Hypothetical protein	UPF0597 protein DVU_0440	Putative uncharacterized protein	UPF0597 protein CTC_02309	UPF0597 protein PG_0909	UPF0597 protein PPA0217	UPF0597 protein VP2173	UPF0597 protein yhaM	UPF0597 protein TDE_2144	UPF0597 protein TTE0269	Residues 1 to 436 of 436 are 99 pct identical to residues 1 to 436 of a 436 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289682.1 orf, conserved hypothetical protein	UPF0597 protein CV_1824	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	hypothetical protein	Similar to Porphyromonas gingivalis W83 hypothetical protein PG0909 SWALL:AAQ66048 (EMBL:AE017175) (433 aa) fasta scores: E(): 1.8e-91, 55.55% id in 432 aa, and to Escherichia coli hypothetical protein YhaM or B3108/B3109 SWALL:YHAM_ECOLI (SWALL:P42626) (437 aa) fasta scores: E(): 2.7e-64, 43.52% id in 425 aa conserved hypothetical protein	UPF0597 protein yhaM	Code: S; COG: COG3681 Uncharacterized conserved protein	Hypothetical protein	
ECOLI02996	Inner membrane transport protein yhaO	Putative transport protein	Putative HAAAP family transport protein	Putative transport system permease protein	Residues 1 to 443 of 443 are 98 pct identical to residues 1 to 443 of a 443 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289683.1 putative transport system permease protein	IPR002091: Aromatic amino acid permease; IPR002422: Amino acid/polyamine transporter, family II; IPR004694: Serine transporter putative HAAAP family transport protein	COG0814 putative transport protein	serine transporter	Similar to Q87MQ6 Putative HAAAP family transport protein from Vibrio parahaemolyticus (441 aa). FASTA: opt: 848 Z-score: 1002.0 E(): 5.8e-48 Smith-Waterman score: 848; 36.292 identity in 383 aa overlap. CDS is interrupted by an ISFtu2 element. It also contains a frameshift after aa 190 and an in-frame stop codon after aa 401 ORF ftt0201 pseudo Transporter protein, pseudogene	Putative HAAAP family transport protein	Code: E; COG: COG0814 putative transport system permease protein	Putative hydroxyl/aromatic amino acid symporter	Code: E; COG: COG0814 putative transport system permease protein	Putative uncharacterized protein	Putative HAAAP family transport protein	pseudo Transporter protein, pseudogene Similar to Q87MQ6 Putative HAAAP family transport protein from Vibrio parahaemolyticus (441 aa). FASTA: opt: 848 Z-score: 1002.0 E(): 5.8e-48 Smith-Waterman score: 848; 36.292 identity in 383 aa overlap. CDS is interrupted by an ISFtu2 element. It also contains a frameshift after aa 190 and an in-frame stop codon after aa 401 ORF ftt0201	Putative transport system permease protein	inner membrane transport protein YhaO	Putative transmembrane transport protein	putative HAAAP family transport protein KEGG: vpa:VP2175 putative HAAAP family transport protein	putative transport system permease protein Code: E; COG: COG0814	serine permease	Putative HAAAP family transport protein	Conserved hypothetical membrane protein	putative amino acid permease	Putative HAAAP family transport protein	Putative HAAAP family transport protein	KEGG: she:Shewmr4_2791 putative HAAAP family transport protein putative HAAAP family transport protein	KEGG: vfi:VF0643 serine transporter serine transporter	
ECOLI02997	L-serine dehydratase tdcG	L-serine dehydratase	L-serine dehydratase	L-serine dehydratase 1	L-serine dehydratase	Putative L-serine deaminase	Residues 1 to 456 of 456 are 98 pct identical to residues 1 to 456 of a 456 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289684.1 putative L-serine deaminase	IPR004644: Iron-sulfur-dependent L-serine dehydratase single chain form; IPR005130: Serine dehydratase alpha chain; IPR005131: Serine dehydratase beta chain L-serine deaminase	similar to Salmonella typhi CT18 L-serine dehydratase L-serine dehydratase	L-serine deaminase	Code: E; COG: COG1760 putative L-serine deaminase	L-serine dehydratase 1 KEGG: sil:SPO1323 L-serine ammonia-lyase, ev=0.0, 88% identity TIGRFAM: L-serine dehydratase 1: (1.8e-213) PFAM: serine dehydratase alpha chain: (3.3e-146) serine dehydratase beta chain: (7.8e-49)	L-serine dehydratase tdcG	L-serine dehydratase	L-serine dehydratase 1	putative L-serine dehydratase Code: E; COG: COG1760	L-serine dehydratase 1 KEGG: vpa:VPA0254 L-serine dehydratase 1 TIGRFAM: L-serine dehydratase 1 PFAM: serine dehydratase alpha chain; serine dehydratase beta chain	L-serine dehydratase	L-serine dehydratase	L-serine dehydratase 1	L-serine dehydratase 1	L-serine dehydratase 1	Putative uncharacterized protein	L-serine dehydratase tdcG	L-serine dehydratase 3	L-serine ammonia-lyase	L-serine dehydratase 1	L-serine ammonia-lyase TdcG	L-serine dehydratase hypothetical protein	
ECOLI02998	Protein tdcF	UPF0076 protein aq_364	Putative uncharacterized protein	Putative endoribonuclease L-PSP	Protein tdcF	Putative uncharacterized protein yhaR	Endoribonuclease L-PSP	Residues 1 to 145 of 145 are 99 pct identical to residues 6 to 150 of a 150 aa protein from Escherichia coli K12 ref: NP_417583.1 orf, conserved hypothetical protein	identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004 endoribonuclease L-PSP, putative	YjgF-like protein	Code: J; COG: COG0251 conserved hypothetical protein	identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004 endoribonuclease L-PSP family protein	Code: J; COG: COG0251 conserved hypothetical protein	YjgF-like protein	YjgF-like protein	TdcF protein	TdcF protein	Putative translation initiation inhibitor, yjgF family COG251 Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis]	Putative translation initiation inhibitor, yjgF family	endoribonuclease L-PSP, putative identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004	Putative translation initiation inhibitor, yjgF family	Hypothetical protein	conserved hypothetical protein Code: J; COG: COG0251	putative L-PSP (mRNA) endoribonuclease	Putative translation initiation inhibitor, yjgF family COG251 Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis]	Putative endoribonuclease L-PSP	Putative uncharacterized protein	Putative endoribonuclease L-PSP	endoribonuclease L-PSP TIGRFAM: endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP KEGG: pen:PSEEN5448 endoribonuclease L-PSP	
ECOLI02999	Keto-acid formate acetyltransferase	Probable formate acetyltransferase	Keto-acid formate acetyltransferase	Putative pyruvate formate-lyase	Probable formate acetyltransferase 3	Residues 1 to 764 of 764 are 99 pct identical to residues 1 to 764 of a 764 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289686.1 probable formate acetyltransferase 3	IPR001150: Formate C-acetyltransferase glycine radical; IPR004184: Pyruvate formate-lyase, PFL; IPR005949: Formate acetyltransferase pyruvate formate-lyase 4/ 2-ketobutyrate formate-lyase	similar to Salmonella typhi CT18 probable formate acetyltransferase probable formate acetyltransferase	Pyruvate formate-lyase 4	Code: C; COG: COG1882 probable formate acetyltransferase 3	Code: C; COG: COG1882 probable formate acetyltransferase 3	Code: C; COG: COG1882 probable formate acetyltransferase 3	Keto-acid formate acetyltransferase	Keto-acid formate acetyltransferase	Keto-acid formate acetyltransferase	probable formate acetyltransferase 3 Code: C; COG: COG1882	putative formate acetyltransferase 3	Keto acid formate lyase	Probable formate acetyltransferase 3	Putative uncharacterized protein	Formate acetyltransferase	Pyruvate formate-lyase 4/2-ketobutyrate formate- lyase	Formate acetyltransferase	Formate acetyltransferase	Formate acetyltransferase	Putative uncharacterized protein	Putative uncharacterized protein	Formate acetyltransferase	Probable formate acetyltransferase	
ECOLI03000	Propionate kinase	Acetate kinase	Acetate kinase 2	Propionate kinase	Propionate kinase	Acetate kinase	Acetate kinase	Acetate kinase 2	Acetate kinase	Propionate kinase	Acetate kinase	Acetate kinase	Acetate kinase 2	Residues 1 to 406 of 406 are 99 pct identical to residues 1 to 406 of a 406 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289687.1 putative kinase	acetate kinase	identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016 acetate kinase	IPR000890: Acetate and butyrate kinase; IPR004372: Acetate kinase propionate kinase/acetate kinase II, anaerobic	similar to Salmonella typhi CT18 propionate kinase propionate kinase	Acetate kinase	Acetate kinase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme acetate kinase (propionate kinase)	acetate kinase	Propionate kinase	Code: C; COG: COG0282 putative kinase	Acetate kinase (Acetokinase)	Code: C; COG: COG0282 putative kinase	acetate kinase	acetate kinase	Code: C; COG: COG0282 putative kinase	
ECOLI03001	Threonine/serine transporter tdcC	Threonine/serine transporter tdcC	Residues 1 to 443 of 443 are 99 pct identical to residues 1 to 443 of a 443 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289688.1 anaerobically inducible L-threonine, L-serine permease	IPR002293: Amino acid/polyamine transporter, family I; IPR002422: Amino acid/polyamine transporter, family II; IPR004694: Serine transporter HAAAP family, L-threonine/ L-serine permease, anaerobically inducible	similar to Salmonella typhimurium HAAAP family, L-threonine/ L-serine permease, anaerobically inducible HAAAP family, L-threonine/ L-serine permease, anaerobically inducible	Threonine/serine transporter tdcC	Code: E; COG: COG0814 anaerobically inducible L-threonine, L-serine permease	Code: E; COG: COG0814 anaerobically inducible L-threonine, L-serine permease	Code: E; COG: COG0814 anaerobically inducible L-threonine, L-serine permease	Threonine/serine transporter tdcC	Threonine/serine transporter tdcC	Threonine/serine transporter	anaerobically inducible L-threonine, L-serine permease Code: E; COG: COG0814	L-threonine/L-serine transporter	Threonine/serine transporter tdcC	L-threonine/L-serine permease, anaerobically inducible	Putative uncharacterized protein	Threonine/serine transporter tdcC	L-threonine/L-serine transporter	Threonine/serine transporter tdcC	Threonine/serine transporter tdcC	Threonine/serine transporter	Putative uncharacterized protein	Putative uncharacterized protein	Threonine/serine transporter	HAAAP family, L-threonine, L-serine permease,anaerobically inducible	Threonine/serine transporter	Threonine/serine transporter	Threonine/serine transporter	
ECOLI03002	Threonine dehydratase catabolic	Threonine dehydratase	Threonine dehydratase	Threonine dehydratase	Threonine dehydratase catabolic	Threonine dehydratase catabolic	Threonine dehydratase	Threonine dehydratase	Threonine deaminase	Catabolic threonine dehydratase	Probable threonine dehydratase, biodegradative	hypothetical threonine dehydratase	Threonine dehydratase	Threonine dehydratase	Threonine dehydratase	Threonine dehydratase	Threonine dehydratase biosynthetic	Threonine dehydratase catabolic	Catabolic threonine dehydratase	Threonine ammonia-lyase, catabolic	Threonine dehydratase	Threonine dehydratase	Threonine ammonia-lyase	Threonine dehydratase catabolic	identified by match to protein family HMM PF00291; match to protein family HMM TIGR01127 threonine dehydratase, catabolic	Threonine dehydratase catabolic	Threonine dehydratase catabolic	Threonine dehydratase	glimmer prediction.  Contains motif similar to Pyridoxal-phosphate dependent enzymes.  Similar to D72386 401 aa threonine dehydratase catabolic - Thermotoga maritima (strain MSB8). ACCESSION   D72386 Putative threonine dehydratase	
ECOLI03003	HTH-type transcriptional regulator tdcA	Probable transcriptional regulator	TDC operon transcriptional activator	Transcriptional regulator	Tdc operon transcriptional activator	LysR family regulatory protein	LysR family regulatory protein	HTH-type transcriptional regulator tdcA	Lin1009 protein	Residues 1 to 312 of 312 are 100 pct identical to residues 1 to 312 of a 312 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289690.1 transcriptional activator of tdc operon	Malolactic regulator	identified by match to protein family HMM PF00126 transcriptional regulator, LysR family	Malolactic fermentation system transcriptional activator	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain transcriptional activator of tdc operon (LysR family)	similar to Salmonella typhi CT18 TDC operon transcriptional activator TDC operon transcriptional activator	Transcriptional regulator, LysR family	Transcriptional activator of tdc operon	Code: K; COG: COG0583 transcriptional activator of tdc operon	similar to gi|57285699|gb|AAW37793.1| [Staphylococcus aureus subsp. aureus COL], percent identity 83 in 284 aa, BLASTP E(): e-136 transcriptional regulator	Code: K; COG: COG0583 transcriptional activator of tdc operon	Transcriptional regulator, LysR family	Transcriptional regulators, LysR family COG0583 [K] Transcriptional regulator	Code: K; COG: COG0583 transcriptional activator of tdc operon	transcriptional regulator, LysR family PFAM: regulatory protein, LysR: (1.6e-17) LysR, substrate-binding: (1.4e-05) KEGG: sil:SPO0980 transcriptional regulator, LysR family, ev=1e-130, 72% identity	Tdc operon transcriptional activator	Transcriptional regulator, LysR family	transcriptional regulator, LysR family identified by match to protein family HMM PF00126; match to protein family HMM PF03466	transcriptional regulator, LysR family identified by match to protein family HMM PF00126; match to protein family HMM PF03466	Tdc operon transcriptional activator	
ECOLI03005	Uncharacterized protein yhaB	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhaB	Putative uncharacterized protein yhaB	Putative uncharacterized protein yhaB	Putative uncharacterized protein yhaB	YhaB protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI03006	Uncharacterized protein yhaC	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1789509 (396 aa). BLAST with identity of 96% in 393 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhaC	Putative uncharacterized protein yhaC	Putative uncharacterized protein yhaC	Putative uncharacterized protein yhaC	pseudo	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI04255	Putative transposon gamma-delta 80.3 kDa protein	ATPase involved in DNA repair	Putative uncharacterized protein	ATPase involved in DNA repair, putative	hypothetical protein	hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolase domain Evidence 5 : No homology to any previously reported sequences	ATPase involved in DNA repair	Putative uncharacterized protein tnpX	Putative uncharacterized protein	Putative uncharacterized protein	

ECOLI03007	Glycerate kinase 2	Glycerate kinase	Glycerate kinase	Putative uncharacterized protein STY3429	Glycerate kinase	Glycerate kinase	Glycerate kinase	putative glycerate kinase	Glycerate kinase 2	identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045 glycerate kinase	Glycerate kinase	Glycerate kinase	Glycerate kinase	glycerate kinase	Putative uncharacterized protein yhaD	CDS_ID OB2786 glycerate kinase	similar to AE004537-6|AAG04441.1| percent identity: 37 in 362 aa putative glycerate kinase	Glycerate kinase	Uncharacterized conserved protein, YHAD family	Glycerate kinase	Glycerate kinase	Residues 1 to 408 of 408 are 99 pct identical to residues 1 to 408 of a 408 aa protein from Escherichia coli O157:H7 ref: NP_312029.1 orf, conserved hypothetical protein	identified by similarity to SP:P23524; match to protein family HMM PF02595; match to protein family HMM TIGR00045 glycerate kinase 2	Glycerate kinase	Putative uncharacterized protein	probable glycerate kinase; Biological Process: protein amino acid phosphorylation (GO:0006468), Molecular Function: glycerate kinase activity (GO:0008887) Glycerate kinase GlxK	IPR004381: Conserved hypothetical protein 45 glycerate kinase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Glycerate kinase	
ECOLI03008	2-hydroxy-3-oxopropionate reductase	Putative 2-hydroxy-3-oxopropionate reductase	3-hydroxyisobutyrate dehydrogenase	Oxidoredutase	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase	Putative dehydrogenase	SC2G5.26c, probable dehydrogenase, len: 296aa; similar to many eg. TR:D1035162 (EMBL:AB015439) D-threonine dehydrogenase (292 aa) fasta scores; opt: 628, z-score:702.7, E(): 7.4e-32, (37.6% identity in 290 aa overlap). putative dehydrogenase	Residues 1 to 299 of 299 are 99 pct identical to residues 1 to 299 of a 299 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289696.1 putative dehydrogenase	IPR002204: 3-hydroxyisobutyrate dehydrogenase; IPR006115: 6-phosphogluconate dehydrogenase, NAD binding domain; IPR006183: 6-phosphogluconate dehydrogenase;IPR006398: 2-hydroxy-3-oxopropionate reductase tartronate semialdehyde reductase (TSAR)	similar to Salmonella typhi CT18 2-hydroxy-3-oxopropionate reductase 2-hydroxy-3-oxopropionate reductase	3-hydroxyisobutyrate dehydrogenase and related proteins MmsB protein	Tartronate semialdehyde reductase	probable 3-hydroxyisobutyrate dehydrogenase	2-hydroxy-3-oxopropionate reductase	Code: I; COG: COG2084 putative dehydrogenase	Code: I; COG: COG2084 putative dehydrogenase	3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase COG2084	Code: I; COG: COG2084 putative dehydrogenase	2-hydroxy-3-oxopropionate reductase	6-phosphogluconate dehydrogenase, NAD-binding protein	2-hydroxy-3-oxopropionate reductase	2-hydroxy-3-oxopropionate reductase KEGG: dsy:DSY4169 hypothetical protein TIGRFAM: 2-hydroxy-3-oxopropionate reductase PFAM: 6-phosphogluconate dehydrogenase, NAD-binding	probable 2-hydroxy-3-oxopropionate reductase Probable 2-hydroxy-3-oxopropionate reductase Homology to glxR of E. coli of 46% (SWISSPROT:GLXR_ECOLI) Activity:- (R)-glycerate + NAD(P)(+) = 2-hydroxy-3-oxopropanoate + NAD(P)H. InterPro: 3-hydroyisobutyrate dehydrogenase (IPR002204) Pfam: Nad binding domain of 6-phosphoglucanate dehydrogenase (PF03446) Tigrfam: gnd_rel: 6-phosphoglucante no signal peptide no TMHs 0 High confidence in function and specificity	6-phosphogluconate dehydrogenase, NAD-binding PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding KEGG: mmc:Mmcs_5347 6-phosphogluconate dehydrogenase, NAD-binding protein	putative dehydrogenase Code: I; COG: COG2084	6-phosphogluconate dehydrogenase, NAD-binding PFAM: 6-phosphogluconate dehydrogenase, NAD-binding KEGG: vpa:VPA1118 3-hydroxyisobutyrate dehydrogenase	Putative hydroxyacid dehydrogenase/reductase	
ECOLI03009	5-keto-4-deoxy-D-glucarate aldolase	5-keto-4-deoxy-D-glucarate aldolase	2-dehydro-3-deoxyglucarate aldolase	Putative aldolase	Putative aldolase	2-dehydro-3-deoxyglucarate aldolase	Putative aldolase	5-keto-4-deoxy-D-glucarate aldolase	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1789514 (257 aa). BLAST with identity of 99% in 256 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase protein	IPR005000: HpcH/HpaI aldolase 2-Dehydro-3-Deoxy-Galactarate Aldolase	similar to Salmonella typhi CT18 5-keto-4-deoxy-D-glucarate aldolase 5-keto-4-deoxy-D-glucarate aldolase	Pyruvate kinase PykF protein	5-keto-4-deoxy-D-glucarate aldolase	2-dehydro-3-deoxyglucarate aldolase	Code: G; COG: COG3836 conserved hypothetical protein	Code: G; COG: COG3836 conserved hypothetical protein	2-dehydro-3-deoxyglucarate aldolase	Code: G; COG: COG3836; orf conserved hypothetical protein	5-keto-4-deoxy-D-glucarate aldolase	HpcH/HpaI aldolase	5-keto-4-deoxy-D-glucarate aldolase	2-dehydro-3-deoxyglucarate aldolase	2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase cytoplasmic protein	2-dehydro-3-deoxyglucarate aldolase PFAM: HpcH/HpaI aldolase KEGG: bur:Bcep18194_B1777 2-dehydro-3-deoxyglucarate aldolase	2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase cytoplasmic protein	2-dehydro-3-deoxyglucarate aldolase	HpcH/HpaI aldolase PFAM: HpcH/HpaI aldolase KEGG: sus:Acid_0199 HpcH/HpaI aldolase	2-dehydro-3-deoxyglucarate aldolase	
ECOLI03010	Probable galactarate transporter	Probable galactarate transporter	Probable galactarate transporter	Residues 1 to 444 of 444 are 99 pct identical to residues 1 to 444 of a 444 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289698.1 putative transport protein	similar to |16077317|ref|NP_388130.1| similar to glucarate transporter [Bacillus subtilis] hypothetical protein	identified by match to protein family HMM PF07690 major facilitator superfamily transporter	Code: GEPR; COG: COG0477 putative transport protein	transcript_id=ENSOCUT00000014007	Probable galactarate transporter	Probable galactarate transporter	transcript_id=ENSFCAT00000008255	putative transport protein Code: GEPR; COG: COG0477	putative (D)-galactarate transporter	Lodderomyces elongisporus (LELG_04001.1) conserved hypothetical protein (translation)	hypothetical protein	D-galactonate transporter	Putative transport protein	Putative uncharacterized protein	Galactarate permease GarP	Predicted (D)-galactarate transporter	Galactarate permease GarP	D-galactonate transporter	Galactarate permease GarP	Major facilitator superfamily MFS_1 precursor	transcript_id=ENSPVAT00000011505	Putative uncharacterized protein	Sodium-dependent phosphate transport protein 1 (Sodium/phosphate cotransporter 1)(Na(+)/PI cotransporter 1)(Solute carrier family 17 member 1)(Renal sodium- dependent phosphate transport protein 1)(Renal sodium- phosphate transport protein 1)(Renal Na(+)-dependent phosphate cotransporter 1)(Na/Pi-4) [Source:UniProtKB/Swiss-Prot;Acc:Q14916]	Galactarate permease GarP	Putative transport protein	
ECOLI03011	D-galactarate dehydratase	D-galactarate dehydratase	D-galactarate dehydratase	D-galactarate dehydratase	D-galactarate dehydratase	D-galactarate dehydratase	Putative hydrolase	Residues 1 to 500 of 500 are 99 pct identical to residues 24 to 523 of a 523 aa protein from Escherichia coli K12 ref: NP_417597.1 putative hydrolase	Probable d-galactarate dehydratase (D-galactarate dehydrogenase) protein	galactarate dehydratase; Molecular Function: hydro-lyase activity (GO:0016836), Molecular Function: hydro-lyase activity (GO:0016836) D-galactarate dehydratase/Altronate hydrolase, N-terminal,D-galactarate dehydratase/Altronate hydrolase, C-terminal	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme D-galactarate dehydrogenase	Altronate dehydratase UxaA protein	D-galactarate dehydratase, putative	Galactarate dehydrogenase	D-galactarate dehydratase	identified by similarity to SP:P39829; match to protein family HMM PF04292; match to protein family HMM PF04295 D-galactarate dehydratase	Galactarate dehydratase	Galactarate dehydratase	Code: G; COG: COG2721 putative hydrolase	D-galactarate dehydratase/Altronate hydrolase-like	Galactarate dehydratase	Galactarate dehydratase	D-galactarate dehydratase	D-galactarate dehydratase/Altronate hydrolase-like protein	Putative D-galactarate dehydratase	Galactarate dehydratase	Galactarate dehydratase PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein KEGG: bur:Bcep18194_B0333 galactarate dehydratase	Galactarate dehydratase PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein KEGG: bja:blr5874 D-galactarate dehydratase	Galactarate dehydratase PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain KEGG: pol:Bpro_3104 galactarate dehydratase	
ECOLI03012	HtrA suppressor protein	HtaR suppressor protein	HtrA suppressor protein	Putative protease; htrA suppressor protein	HtaR suppressor protein	Suppressor protein SohA	HtrA suppressor protein sohA, putative	Transcriptional regulator AbrB	HtrA suppressor protein	HtaR suppressor protein	HtrA suppressor protein sohA, putative	Hypothetical protein	HtrA suppressor protein SohA	Predicted regulator	HtrA suppressor protein SohA	Suppressor protein SohA	HtaR suppressor protein	Putative regulator PrlF	Putative uncharacterized protein	HtrA suppressor protein	Putative regulator	Putative regulator	Putative regulator	Putative regulator	Putative regulator	SohA protein	Putative protease; htra suppressor protein	Predicted regulator	Predicted regulator	
ECOLI03013	Uncharacterized protein yhaV	Slr0725 protein	Hypothetical protein yhaV	Uncharacterized protein yhaV	Similar to unknown protein YhaV of Escherichia coli	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein KEGG: bxe:Bxe_A1175 hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03014	Putative aga operon transcriptional repressor	hypothetical GlpR, transcriptional regulators of sugar metabolism	Putative aga operon transcriptional repressor	Putative aga operon transcriptional repressor	Transcriptional regulator of sugar metabolism	Residues 1 to 269 of 274 are 98 pct identical to residues 1 to 269 of a 269 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289702.1 putative DEOR-type transcriptional regulator of aga operon	Putative aga operon transcriptional repressor	Putative aga operon transcriptional repressor	Putative DEOR-type transcriptional regulator of aga operon	glucitol operon repressor identified by match to protein family HMM PF00455; match to protein family HMM PF08220	Putative aga operon transcriptional repressor	DNA-binding transcriptional dual regulator	transcriptional regulator, GlpR family KEGG: vfi:VFA1006 transcriptional regulator, GlpR family	Transcriptional regulator, DeoR family	Putative uncharacterized protein	Transcriptional regulator, DeoR family	Putative aga operon DeoR family transcriptional repressor	DNA-binding transcriptional dual regulator	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Putative uncharacterized protein	Transcriptional regulator, DeoR family	DeoR family regulatory protein Similar to Escherichia coli glucitol operon repressor srlR SWALL:SRLR_ECOLI (SWALL:P15082) (257 aa) fasta scores: E(): 4.9e-21, 35.74% id in 249 aa; contains 20 amino acid N terminal extension	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Putative transcriptional regulator	DNA-binding transcriptional dual regulator	DNA-binding transcriptional dual regulator	
ECOLI03015	D-tagatose-1,6-bisphosphate aldolase subunit kbaZ	Putative tagatose 6-phosphate kinase protein	putative tagatose 6-phosphate kinase	Putative tagatose 6-phosphate kinase agaZ	D-tagatose-1,6-bisphosphate aldolase subunit kbaZ	SC9B10.15, agaZ, possible tagatose 6-phosphate kinase, len: 435; highly similar to AGAZ_ECOLI P42903 putative tagatose 6-phosphate kinase (426 aa), fasta scores; opt: 1637 z-score: 2100.1 E(): 0, 57.5% identity in 421 aa overlap tagatose 6-phosphate kinase	Residues 1 to 426 of 426 are 99 pct identical to residues 1 to 426 of a 426 aa protein from Escherichia coli K12 ref: NP_417601.1 putative tagatose 6-phosphate kinase 2	Putative tagatose 6-phosphate kinase	Putative tagatose 6-phosphate kinase protein	Putative tagatose 6-phosphate kinase	tagatose-6-phosphate kinase	conserved hypothetical protein	Tagatose-6-phosphate kinase	Tagatose-bisphosphate aldolase noncatalytic subunit	putative tagatose 6-phosphate kinase protein identified by match to protein family HMM PF08013	D-tagatose-1,6-bisphosphate aldolase subunit kbaZ	Tagatose-6-phosphate kinase	Putative tagatose 6-phosphate kinase	D-tagatose-1,6-bisphosphate aldolase subunit kbaZ	Tagatose-6-phosphate kinase PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ KEGG: bur:Bcep18194_A5927 tagatose-6-phosphate kinase	Tagatose 6-phosphate kinase	Tagatose-6-phosphate kinase PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ KEGG: bcn:Bcen_1986 tagatose-6-phosphate kinase	D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit identified by match to protein family HMM PF08013; match to protein family HMM TIGR02810	conserved hypothetical protein identified by match to protein family HMM PF08013	D-tagatose-bisphosphate aldolase class II accessory protein AgaZ PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ KEGG: ecj:JW3101 tagatose 6-phosphate aldolase 1, kbaZ subunit	Tagatose 6-phosphate kinase	Tagatose-6-phosphate kinase	putative tagatose 6-phosphate kinase 2	Tagatose 6-phosphate kinase	
ECOLI03016	N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2	Phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component IIB	putative N-acetylgalactosamine-specific IIB component	PTS system, N-acetylgalactosamine-specific IIB component 2	PTS system, IIB component	Putative PTS dependent N-acetyl-galactosamine-IIB component	PTS system, cytoplasmic, N-acetylgalactosamine- specific IIB component 2	Phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component IIB	Residues 1 to 169 of 169 are 98 pct identical to residues 1 to 169 of a 169 aa protein from Escherichia coli O157:H7 ref: NP_312038.1 N-acetylgalactosamine-specific PTS system enzyme IIB component	PTS system, N-acetylgalactosamine-specific IIB component	Putative uncharacterized protein gbs1888	PTS system, IIB component	PTS system, N-acetylgalactosamine-specific IIB component	best blastp match gb|AAK33599.1| (AE006517) putative PTS dependent N-acetyl-galactosamine-IIB component [Streptococcus pyogenes M1 GAS] putative PTS dependent N-acetyl-galactosamine-IIB component	Putative Phosphotransferase system sugar-specific EII component	PTS system, N-acetylgalactosamine-specific IIB component	Mannose/fructose/N-acetylgalactosamine-specific component IIB	PTS system, N-acetylgalactosamine-specific IIB component	PTS system, N-acetylgalactosamine-specific IIB component	PTS system, N-acetylgalactosamine-specific IIB component 2	PTS system, IIB component identified by match to protein family HMM PF03830	PTS system, mannose/fructose/sorbose family, IIB component identified by match to protein family HMM PF03830	N-acetylgalactosamine-specific PTS system enzyme IIB component	PTS system, N-acetylgalactosamine-specific IIB component	N-acetylgalactosamine-specific phosphotransferase enzyme IIB component2 identified by match to protein family HMM PF03830; match to protein family HMM TIGR00854	Phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component IIB	PTS system, IIB component equivalent gene in S.pneumoniae TIGR4 = SP0323; equivalent gene in S.pneumoniae R6 = spr0293; identified by match to protein family HMM PF03830	Phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component IIB	Putative N-acetylgalactosamine-specific phosphotransferase system (PTS), IIB component	
ECOLI03017	Putative N-acetylgalactosamine permease IIC component 2	
ECOLI03018	Putative N-acetylgalactosamine-6-phosphate deacetylase	Predicted truncated N-acetylgalactosamine-6- phosphate deacetylase	
ECOLI03019	Putative tagatose-6-phosphate ketose/aldose isomerase	Probable tagatose-6-phosphate aldose/ketose isomerase	AgaS protein	Predicted phosphosugar isomerase	putative phosphosugar isomerase	Putative tagatose-6-phosphate ketose/aldose isomerase	Sugar isomerase domain protein AgaS	identified by match to protein family HMM PF01380 tagatose-6-phosphate ketose/aldose isomerase, putative	Putative tagatose-6-phosphate aldose/ketose isomerase	Putative tagatose-6-phosphate aldose/ketose isomerase	Putative tagatose-6-phosphate ketose/aldose isomerase	SC9B10.16, agaS, len: 385 aa; similar to AGAS_ECOLI P42907 agas protein (384 aa) (possible tagatose-6-phosphate ketose/aldose isomerase), fasta scores; opt: 960 z-score: 1350.4 E(): 0, 45.9% identity in 366 aa overlap AgaS protein	Predicted phosphosugar isomerase	Putative phosphosugar isomerase	Putative tagatose-6-phosphate ketose/aldose isomerase	Galactosamine-6-phosphate deaminase (isomerizing)	Putative phosphosugar isomerase	Putative tagatose-6-phosphate aldose/ketose isomerase	best blastp match gb|AAK33669.1| (AE006523) putative tagatose-6-phosphate aldose/ketose isomerase [Streptococcus pyogenes M1 GAS] putative tagatose-6-phosphate aldose/ketose isomerase	Putative Tagatose-6-phosphate ketose/aldose isomerase	galactosamine-6-phosphate deaminase (isomerizing)	possible tagatose-6-phosphate ketose/aldose isomerase	galactosamine-6-phosphate deaminase (isomerizing)	Galactosamine-6-phosphate deaminase (isomerizing)	Galactosamine-6-phosphate deaminase (isomerizing)	sugar isomerase (SIS)	galactosamine-6-phosphate deaminase (isomerizing)	Putative tagatose-6-phosphate ketose/aldose isomerase	Sugar isomerase	
ECOLI03020	D-tagatose-1,6-bisphosphate aldolase subunit kbaY	Tagatose-1,6-bisphosphate aldolase agaY	fructose-1,6-bisphosphate aldolase	D-tagatose-1,6-bisphosphate aldolase subunit kbaY	D-tagatose-1,6-bisphosphate aldolase subunit kbaY	hypothetical protein similarity to COG0191 Fructose/tagatose bisphosphate aldolase(Evalue: 5E-52)	D-tagatose-1,6-bisphosphate aldolase subunit kbaY	tagatose 6-phosphate aldolase 1, KbaY subunit	Tagatose-bisphosphate aldolase catalytic subunit	Putative uncharacterized protein	Tagatose-1,6-bisphosphate aldolase agaY	Tagatose 6-phosphate aldolase 1, kbaY subunit	Tagatose-1,6-bisphosphate aldolase agaY	Class II aldolase, tagatose bisphosphate family	Tagatose-1,6-bisphosphate aldolase agaY	Putative uncharacterized protein	Class II aldolase, tagatose bisphosphate family	Fructose-bisphosphate aldolase	Tagatose-1,6-bisphosphate aldolase agaY	Tagatose-bisphosphate aldolase	D-tagatose-1,6-bisphosphate aldolase subunit kbaY	D-tagatose-1,6-bisphosphate aldolase subunit kbaY	Tagatose 6-phosphate aldolase 1, kbaY subunit	Tagatose 6-phosphate aldolase 1, kbaY subunit	D-tagatose-1,6-bisphosphate aldolase subunit kbaY	Tagatose 6-phosphate aldolase 1, KbaY subunit	D-tagatose-1,6-bisphosphate aldolase subunit kbaY	KbaY protein	Class II aldolase, tagatose bisphosphate family	
ECOLI03021	N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 1	PTS system, N-acetylgalactosamine-specific IIB component 1	PTS system, cytoplasmic, N-acetylgalactosamine- specific IIB component 1	N-acetylgalactosamine PTS, EIIB	PTS system mannose/fructose/sorbose-specific IIB component	PTS system, N-acetylgalactosamine-specific IIB component 1	PTS system, cytoplasmic, N-acetylgalactosamine- specific IIB component 1	PTS system, IIb component	phosphotransferase system, sorbose subfamily IIB component	N-acetylgalactosamine-specific enzyme IIB component of PTS	PTS system, mannose/fructose/sorbose family, IIB subunit	PTS system, mannose/fructose/sorbose family, IIB subunit	PTS system, D galactosamine-specific, IIB component	N-acetylgalactosamine-specific enzyme IIB component of PTS	PTS system, D galactosamine-specific, IIB component	PTS system, mannose/fructose/sorbose family, IIB subunit	PTS system, D galactosamine-specific, IIB component	PTS system sorbose subfamily IIB component	PTS system sorbose subfamily IIB component	PTS system, D galactosamine-specific, IIB component	PTS system N-acetylgalactosamine-specific IIB component	N-acetylgalactosamine-specific enzyme IIB component of PTS	N-acetylgalactosamine-specific enzyme IIB component of PTS	N-acetylgalactosamine-specific enzyme IIB component of PTS	N-acetylgalactosamine-specific enzyme IIB component of PTS	N-acetylgalactosamine-specific enzyme IIB component of PTS	N-acetylgalactosamine-specific enzyme IIB component of PTS	N-acetylgalactosamine-specific enzyme IIB component of PTS	AgaB protein	
ECOLI03022	N-acetylgalactosamine permease IIC component 1	PTS system, N-acetylgalactosamine-specific IIC component 1	PTS system, IIC component	Putative PTS dependent N-acetyl-galactosamine-IIC component	PTS system N-acetylgalactosamine-specific IIC component 1	Residues 1 to 267 of 267 are 99 pct identical to residues 1 to 267 of a 267 aa protein from Escherichia coli K12 ref: NP_417608.1 PTS system N-acetylgalactosamine-specific IIC component 1	N-acetylgalactosamine PTS, EIIC	PTS system, N-acetylgalactosamine-specific IIC component	Putative uncharacterized protein gbs1887	PTS system, IIC component	PTS system, N-acetylgalactosamine-specific IIC component	best blastp match gb|AAK33598.1| (AE006517) putative PTS dependent N-acetyl-galactosamine-IIC component [Streptococcus pyogenes M1 GAS] putative PTS dependent N-acetyl-galactosamine-IIC component	Putative Phosphotransferase system sugar-specific EII component	PTS system, N-acetylgalactosamine-specific IIC component	PTS system, N-acetylgalactosamine-specific IIC component	PTS system, N-acetylgalactosamine-specific IIC component	PTS system, N-acetylgalactosamine-specific IIC component	PTS system, N-acetylgalactosamine-specific IIC component 1	PTS system sorbose-specific iic component superfamily identified by match to protein family HMM PF03609	PTS system, mannose/fructose/sorbose family, IIC component identified by match to protein family HMM PF03609	PTS system, N-acetylgalactosamine-specific IIC component 1	PTS system, N-acetylgalactosamine-specific IIC component	Phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component IIC	PTS system, IIC component equivalent gene in S.pneumoniae TIGR4 = SP0324; equivalent gene in S.pneumoniae R6 = spr0294; identified by match to protein family HMM PF03609	Phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component IIC	Putative N-acetylgalactosamine-specific phosphotransferase system (PTS), IIC component	PTS system, N-acetylgalactosamine-specific IIC component 1	N-acetylgalactosamine PTS, EIIC	PTS system, mannose/fructose/sorbose family, IIC subunit	
ECOLI03023	N-acetylgalactosamine permease IID component	PTS system, N-acetylglucosamine enzyme IID component 1	Residues 1 to 286 of 286 are 99 pct identical to residues 5 to 290 of a 290 aa protein from Escherichia coli gb: AAA57943.1 orf, conserved hypothetical protein	N-acetylgalactosamine PTS, EIID	PTS enzyme IID, mannose-specific	PTS system, N-acetylgalactosamine-specific IID component	PTS system, N-acetylgalactosamine-specific IID component	N-acetylglucosamine transport enzyme IID component 1	mannose-specific PTS system component IID	PTS system, mannose/fructose/sorbose family, IID subunit	PTS system, mannose/fructose/sorbose family, IID subunit	PTS system, D-galactosamine-specific, IID component	PTS system mannose/fructose/sorbose family IID component	N-acetylgalactosamine-specific enzyme IID component of PTS	PTS system, D-galactosamine-specific, IID component	PTS system, mannose/fructose/sorbose family, IID subunit	PTS system, D-galactosamine-specific, IID component	PTS system, D-galactosamine-specific, IID component	PTS system N-acetylgalactosamine-specific IID component	N-acetylgalactosamine-specific enzyme IID component of PTS	N-acetylgalactosamine-specific enzyme IID component of PTS	N-acetylgalactosamine-specific enzyme IID component of PTS	N-acetylgalactosamine-specific enzyme IID component of PTS	N-acetylgalactosamine-specific enzyme IID component of PTS	N-acetylgalactosamine-specific enzyme IID component of PTS	N-acetylgalactosamine-specific enzyme IID component of PTS	AgaD protein	N-acetylgalactosamine-specific PTS system transporter subunit IID	N-acetylgalactosamine-specific enzyme IID component of PTS	
ECOLI03024	Putative galactosamine-6-phosphate isomerase	Putative galactosamine-6-phosphate isomerase	Putative galactosamine-6-phosphate isomerase	Lin0875 protein	Residues 1 to 251 of 251 are 98 pct identical to residues 1 to 251 of a 251 aa protein from Escherichia coli K12 ref: NP_417610.1 putative galactosamine-6-phosphate isomerase	identified by similarity to SP:O35000; match to protein family HMM PF01182 glucosamine-6-phosphate isomerase, putative	Glucosamine-6-phosphate deaminase	Putative galactosamine-6-phosphate isomerase	putative N-acetylglucosamine-6-phosphate isomerase	Glucosamine-6-phosphate isomerase	Putative galactosamine-6-phosphate isomerase	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	putative galactosamine-6-phosphate isomerase	Putative galactosamine-6-phosphate isomerase	Glucosamine-6-phosphate deaminase	Galactosamine 6-phosphate isomerase	Galactosamine-6-phosphate isomerase	Galactosamine-6-phosphate isomerase	Galactosamine-6-phosphate isomerase	Glucosamine-6-phosphate deaminase	Putative galactosamine-6-phosphate isomerase	Putative galactosamine-6-phosphate isomerase	Galactosamine-6-phosphate isomerase	Glucosamine-6-phosphate isomerase, putative	Galactosamine-6-phosphate isomerase	Galactosamine-6-phosphate isomerase	Galactosamine-6-phosphate isomerase	
ECOLI03025	Uncharacterized fimbrial-like protein yraH	Fimbrial protein	Predicted fimbrial-like adhesin protein	Putative type 1 fimbrial protein	Fimbrial protein precursor	Putative uncharacterized protein	Putative type 1 fimbrial protein	Putative fimbrial protein	Putative fimbrial-like adhesin protein	Putative fimbrial-like adhesin protein	YraH protein	Predicted fimbrial-like adhesin protein	Predicted fimbrial-like adhesin protein	predicted fimbrial-like adhesin protein	Fimbrial protein	
ECOLI03026	Uncharacterized fimbrial chaperone yraI	Putative chaperone	Residues 1 to 231 of 231 are 99 pct identical to residues 1 to 231 of a 231 aa protein from Escherichia coli K12 ref: NP_417612.1 putative chaperone	putative chaperone Code: NU; COG: COG3121	Pili assembly chaperone precursor	Gram-negative pili assembly chaperone protein	Pili assembly chaperone precursor	Predicted periplasmic pilin chaperone	Gram-negative pili assembly chaperone protein	Pili assembly chaperone precursor	Long polar fimbrial operon protein LpfB	Putative uncharacterized protein	Pili assembly chaperone, N-terminal precursor	Putative uncharacterized protein	Chaperone protein FimC	Chaperone protein LpfB	Gram-negative pili assembly chaperone protein	Putative fimbrial chaperone	Putative fimbrial chaperone protein	Periplasmic pilin chaperone	Periplasmic pilin chaperone	YraI protein	Predicted periplasmic pilin chaperone	Predicted periplasmic pilin chaperone	predicted periplasmic pilin chaperone	Pili assembly chaperone, N-terminal	
ECOLI03027	Uncharacterized outer membrane usher protein yraJ	Putative outer membrane protein	Residues 1 to 840 of 840 are 99 pct identical to residues 1 to 840 of a 840 aa protein from Escherichia coli gb: AAL18163.1 LpfC	Code: NU; COG: COG3188 putative outer membrane protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function ; putative membrane protein	Code: NU; COG: COG3188 putative outer membrane protein	Fimbrial usher family protein	Predicted outer membrane protein	Fimbrial usher family protein	Fimbrial biogenesis outer membrane usher protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Fimbrial outer membrane usher protein	Outer membrane usher protein FimD	Fimbrial usher family protein	Outer membrane usher protein FimD	Putative fimbrial usher protein	Putative outer membrane protein	Predicted fimbrial outer membrane usher protein	Putative outer membrane protein	YraJ protein	Predicted outer membrane protein	Predicted outer membrane protein	predicted outer membrane protein	Fimbrial biogenesis outer membrane usher protein	
ECOLI03028	Uncharacterized fimbrial-like protein yraK	Residues 1 to 389 of 389 are 98 pct identical to residues 41 to 429 of a 429 aa protein from Escherichia coli gb: AAA57948.1 orf, conserved hypothetical protein	Code: NU; COG: COG3539 putative fimbrial protein	Code: NU; COG: COG3539 putative fimbrial protein	Code: NU; COG: COG3539 putative fimbrial protein	putative fimbrial protein Code: NU; COG: COG3539	Fimbrial protein precursor	Putative fimbrial protein	Predicted fimbrial-like adhesin protein	Putative fimbrial protein	Putative fimbrial protein precursor	Putative uncharacterized protein	Long polar fimbrial operon protein LpfD	Putative fimbrial protein precurosr	Putative fimbrial protein precurosr	Putative fimbrial protein precurosr	Fimbrial family protein	Putative fimbriae	Putative fimbrial protein	Putative fimbrial-like adhesin protein	Predicted fimbrial protein	Putative fimbrial-like adhesin protein	YraK protein	Putative fimbrial protein	Predicted fimbrial-like adhesin protein	predicted fimbrial-like adhesin protein	Predicted fimbrial-like adhesin protein	
ECOLI03029	UPF0011 protein yraL	Methyltransferase	Tetrapyrrole methylase family protein	UPF0011 protein PD_1588	UPF0011 protein sll0818	Putative uncharacterized protein	UPF0011 protein MG056	UPF0011 protein MG056 homolog	UPF0011 protein HI1654	Methyltransferase	Tetrapyrrole methylase family protein	Putative tetrapyrrole methylase	Putative uncharacterized protein	Putative uncharacterized protein	Putative tetrapyrrole methylase family protein	Putative tetrapyrrole methylase family protein	Putative uncharacterized protein CPE0280	Tetrapyrrole methylase family protein	Tetrapyrrole methylase family protein	Putative uncharacterized protein	UPF0011 protein NMB2088	UPF0011 protein PM0645	UPF0011 protein PA4422	Putative tetrapyrrole methylase family protein	UPF0011 protein TM_0709	Predicted methyltransferase	Putative uncharacterized protein	Predicted methyltransferase	Corrin/porphyrin methyltransferase	
ECOLI03030	Uncharacterized protein yraM	LppC	Putative uncharacterized protein	Putative lipoprotein	Possible exported protein	hypothetical lipoprotein	Hypothetical protein yraM	Lipoprotein, putative	Lipoprotein, putative	Putative exported protein	Lipoprotein, putative	Putative lipoprotein	Putative glycosylase	Putative lipoprotein	Residues 11 to 688 of 688 are 99 pct identical to residues 1 to 678 of a 678 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289723.1 putative glycosylase	Putative exported protein	Similar to putative glycosylase YraM of Escherichia coli	conserved hypothetical protein, putative lipoprotein hypothetical protein	conserved gene lipoprotein	conserved hypothetical protein, putative lipoprotein hypothetical protein	IPR007443: LppC putative lipoprotein paral putative transglycosylase	similar to Salmonella typhi CT18 possible exported protein possible exported protein	Putative exported protein	Putative lipoprotein	GS60 antigen	Similar to: HI1655, YRAM_HAEIN putative lipoprotein	Putative lipoprotein LppC protein	Lipoprotein, putative	Putative lipoprotein	
ECOLI03031	UPF0102 protein yraN	UPF0102 protein GSU0650	UPF0102 protein PD_1586	UPF0102 protein XCC0710	UPF0102 protein HI1656	UPF0102 protein CT2262	UPF0102 protein BL0935	UPF0102 protein NMB2089	UPF0102 protein PM0647	UPF0102 protein PA4424	UPF0102 protein VV0603	UPF0102 protein DR_2282	UPF0102 protein yraN	UPF0102 protein DP2807	UPF0102 protein BPSL3274	conserved hypothetical protein	UPF0102 protein yraN	UPF0102 protein DVU_0833	UPF0102 protein VC_0580	pseudo	UPF0102 protein BB4515	UPF0102 protein SO_0299	UPF0102 protein TP_0913	UPF0102 protein STH1475	UPF0102 protein CTC_01256	UPF0102 protein PSPTO_4420	UPF0102 protein BPP4042	UPF0102 protein NFA_41430	Putative uncharacterized protein	
ECOLI03032	DnaA initiator-associating protein diaA	Phosphoheptose isomerase	Putative uncharacterized protein	Phosphoheptose isomerase	Phosphoheptose isomerase	DnaA initiator-associating protein diaA	Putative phosphosugar isomerase	putative phosphoheptose isomerase	DnaA initiator-associating protein diaA	Phosphoheptose isomerase, putative	Probable phosphosugar isomerase	Probable phosphosugar isomerase	Phosphoheptose isomerase	DnaA initiator-associating protein diaA	Phosphoheptose isomerase	Probable phosphosugar isomerase	Phosphoheptose isomerase	Putative phosphoheptose isomerase	DnaA initiator-associating protein diaA	Phosphoheptose isomerase	Phosphoheptose isomerase	Residues 1 to 196 of 196 are 99 pct identical to residues 1 to 196 of a 196 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289725.1 orf, conserved hypothetical protein	DnaA initiator-associating protein diaA	DnaA initiator-associating protein diaA	similar to phosphoheptose isomerase hypothetical protein	conserved gene phosphoheptose isomerase	similar to phosphoheptose isomerase hypothetical protein	IPR001347: Sugar isomerase (SIS); IPR004515: Phosphoheptose isomerase putative phosphoheptose isomerase	similar to Salmonella typhi CT18 probable phosphoheptose isomerase probable phosphoheptose isomerase	
ECOLI03033	Uncharacterized protein yraP	Putative hemolysin	Putative uncharacterized protein	Putative uncharacterized protein	Putative hemolysin	Possible lipoprotein	Putative lipoprotein	Membrane protein, putative	hypothetical hemolysin	Hypothetical protein yraP precursor	Hemolysin, putative	Possible periplasmic protein	Putative exported protein	Putative exported protein	Lipoprotein, putative	Putative lipoprotein	Lipoprotein, putative	Putative exported protein	Transporter, putative	Putative hemolysin	Uncharacterized protein yraP	Lipoprotein	Predicted periplasmic or secreted lipoprotein	Putative uncharacterized protein RP391	Residues 1 to 191 of 191 are 99 pct identical to residues 1 to 191 of a 191 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289726.1 putative periplasmic protein	Putative exported protein	Putative uncharacterized protein	YraP protein	Similar to unknown protein YraP of Escherichia coli	
ECOLI03034	UPF0718 protein yraQ	Transporter	Putative uncharacterized protein	Predicted permease	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Hypothetical protein yraQ	Putative uncharacterized protein	Putative uncharacterized protein	Transporter, putative	Putative uncharacterized protein	Putative uncharacterized protein yraQ	Residues 1 to 346 of 346 are 99 pct identical to residues 1 to 346 of a 346 aa protein from Escherichia coli O157:H7 ref: NP_312059.1 orf, conserved hypothetical protein	Hypothetical membrane spanning protein	conserved hypothetical protein	Predicted permease/membrane protein	Putative uncharacterized protein gbs0751	similar to OMNI:NTL01SPL0428; identified by sequence similarity; putative ABC transporter, permease protein, putative	Hypothetical membrane spanning protein	best blastp match gb|AAK33560.1| (AE006514) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] conserved hypothetical protein	Conserved hypothetical protein	Conserved hypothetical, predicted membrane protein (TMS7)	identified by match to protein family HMM PF03773 Predicted permease family	identified by match to protein family HMM PF03773 permease, putative	hypothetical membrane spanning protein	Code: R; COG: COG0701 conserved hypothetical protein	Predicted permeases	Code: R; COG: COG0701 conserved hypothetical protein	
ECOLI03035	Uncharacterized protein yraR	conserved hypothetical protein;	Protein of unknown function, localized to the mitochondrial outer membrane; induced by treatment with 8- methoxypsoralen and UVA irradiation.  [Source:SGD;Acc:S000000806]	similar to sp|P40008 Saccharomyces cerevisiae YER004w singleton, start by similarity	similar to uniprot|P40008 Saccharomyces cerevisiae YER004w;	DEHA2F15070p;similar to uniprot|P40008 Saccharomyces cerevisiae YER004W FMP52 The authentic non-tagged protein was localized to the mitochondria;	Putative uncharacterized protein	Predicted nucleoside-diphosphate-sugar epimerase	HIV-1 Tat interactive protein-like protein	Putative uncharacterized protein STY3451	Putative uncharacterized protein	Oxidoreductase	Putative uncharacterized protein	hypothetical protein	Nucleoside-diphosphate-sugar epimerases	Hypothetical protein yraR	conserved hypothetical protein	go_component: endoplasmic reticulum [goid 0005783] endoplasmic reticulum protein, putative	Putative uncharacterized protein	Putative uncharacterized protein	semialdehyde dehydrogenase	Putative uncharacterized protein VP1303	Putative uncharacterized protein yraR	Putative uncharacterized protein	Predicted nucleoside-diphosphate-sugar epimerases	Putative uncharacterized protein	Residues 1 to 226 of 226 are 98 pct identical to residues 1 to 226 of a 226 aa protein from Escherichia coli K12 ref: NP_417621.1 orf, conserved hypothetical protein	Predicted nucleoside-diphosphate-sugar epimerases	Putative nad-dependent epimerase/dehydratase; protein	
ECOLI03037	UPF0306 protein yhbP	UPF0306 protein Cj1449c	UPF0306 protein yhbP	UPF0306 protein yhbP	Putative uncharacterized protein	UPF0306 protein WS0399	UPF0306 protein yhbP	Residues 1 to 147 of 147 are 100 pct identical to residues 1 to 147 of a 147 aa protein from Escherichia coli K12 ref: NP_417623.1 orf, conserved hypothetical protein	UPF0306 protein YPO3467/y0717/YP_0616	UPF0306 protein plu4501	identified by similarity to GP:26110162 conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0306 protein YPTB0506	UPF0306 protein yhbP	conserved hypothetical protein	Code: S; COG: COG3787 conserved hypothetical protein	Code: S; COG: COG3787 conserved hypothetical protein	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein	conserved hypothetical protein	Pyridoxamine 5'-phosphate oxidase-related, FMN- binding	Code: S; COG: COG3787; orf conserved hypothetical protein	UPF0306 protein yhbP	Hypothetical protein	UPF0306 protein yhbP	protein YhbP	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	
ECOLI03036	Protein yhbO	Protease I	Intracellular protease, PfpI family	Intracellular protease I	Protease	Uncharacterized protein AF_1281	Predicted intracellular protease/amidase	Putative intracellular protease/amidase	Putative uncharacterized protein	Intracellular protease 1	Protease PfpI	Protease I	Proteinase	Putative uncharacterized protein STY3452	ThiJ/pfpI family protein	Protease I	Protease I, ThiJ/PfpI family protein	identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382 thiJ/pfpI family protein	PMID: 96196168 best DB hits: BLAST: pir:T34745; probable proteinase pfpI - Streptomyces coelicolor; E=6e-55 pir:F75423; proteinase I - Deinococcus radiodurans (strain R1); E=1e-50 pir:E83601; proteinase PfpI PA0355 [imported] - Pseudomonas; E=3e-40 COG: DR1199; COG0693 Putative intracellular protease/amidase; E=1e-51 BH1980; COG0753 Catalase; E=4e-07 BB0621; COG0693 Putative intracellular protease/amidase; E=4e-07 PFAM: PF00117; Glutamine amidotransferase class-I; E=0.13 PF01965; ThiJ/PfpI family; E=1.1e-61 proteinase I	probable protease	Putative intracellular protease , general stress protein 18	Putative protease	Putative uncharacterized protein yhbO	CDS_ID OB0023; Gsp18 general stress protein 18	similar to AE004833-9|AAG07558.1| percent identity: 52 in 180 aa conserved hypothetical protein	Putative intracellular protease, PfpI family	General stress protein	SC1E6.24c, pfpI, probable protease, len: 180 aa; similar to e.g. PFPI_PYRFU protease I (EC 3.2.-.-) (166 aa), fasta scores; opt: 413 z-score: 411.9 E(): 1.2e-15, 41.3% identity in 172 aa overlap putative protease	Residues 1 to 187 of 187 are 97 pct identical to residues 1 to 187 of a 187 aa protein from Escherichia coli K12 gi: 1789543 orf, conserved hypothetical protein	
ECOLI03039	Uncharacterized N-acetyltransferase yhbS	Sll6060 protein	Acetyltransferase	Putative uncharacterized protein	Predicted acetyltransferase	Acetyltransferase	Putative acetyltransferase	Hypothetical acetyltransferase yhbS	Acetyltransferase, GNAT family	Acetyltransferase, putative	Putative uncharacterized protein	Putative uncharacterized protein	Putative acetyltransferase	Putative uncharacterized protein	Putative acetyltransferase	Uncharacterized N-acetyltransferase yhbS	Predicted acetyltransferase	Residues 1 to 167 of 167 are 99 pct identical to residues 1 to 167 of a 167 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289732.1 orf, conserved hypothetical protein	Putative acetyltransferase	Similar to hypothetical acetyltransferase YhbS of Escherichia coli	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	Acetyltransferase protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark acetyltransferase	IPR000182: GCN5-related N-acetyltransferase putative ABC superfamily (membrane) transport protein	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	Acetyltransferase	Putative acetyltransferase	acetyltransferase	Putative ABC superfamily transport protein	
ECOLI03038	UPF0213 protein yhbQ	UPF0213 protein XCC3072	Hypothetical UPF0213 protein Vng2274c	UPF0213 protein CPE1444	UPF0213 protein PA3854	Predicted endonuclease	UPF0213 protein yhbQ	UPF0213 protein BA_0032/GBAA_0032/BAS0034	UPF0213 protein DP2720	UPF0213 protein BT9727_0031	hypothetical protein	UPF0213 protein yhbQ	putative nuclease	identified by match to protein family HMM PF01541 conserved hypothetical protein	UPF0213 protein DVU_3309	UPF0213 protein VC_A0739	UPF0213 protein ECA0725	Endo/excinuclease domain protein	hypothetical protein	UPF0213 protein VPA1222	UPF0213 protein yhbQ	CDS_ID OB0043 hypothetical protein	Putative uncharacterized protein	UPF0213 protein BH0048	Residues 4 to 103 of 103 are 99 pct identical to residues 1 to 100 of a 100 aa protein from Escherichia coli K12 ref: NP_417624.1 orf, conserved hypothetical protein	UPF0213 protein YPO3475/y0709/YP_0608	UPF0213 protein SAV0488	UPF0213 protein plu4503	UPF0213 protein lp_2058	
ECOLI03040	Uncharacterized protein yhbT	Putative lipid carrier protein	Putative uncharacterized protein STY3456	putative lipid carrier protein	Hypothetical protein yhbT	Putative uncharacterized protein VC0654	Putative uncharacterized protein	Putative sterol transferase	Putative lipid carrier protein	Uncharacterized protein yhbT	Putative lipid carrier protein	Residues 9 to 182 of 182 are 98 pct identical to residues 1 to 174 of a 174 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289733.1 orf, conserved hypothetical protein	Putative lipid carrier protein	IPR003033: Sterol-binding putative lipid carrier protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative lipid carrier protein	sterol binding protein	Predicted lipid carrier protein	Putative lipid carrier protein	identified by match to protein family HMM PF02036 SCP-2 sterol transfer family protein	Code: I; COG: COG3154 conserved hypothetical protein	Code: I; COG: COG3154 conserved hypothetical protein	conserved hypothetical protein	Code: I; COG: COG3154; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Sterol-binding domain protein	Putative lipid carrier protein	Hypothetical protein	
ECOLI03041	Uncharacterized protease yhbU	Probable protease	Collagenase	Protease	Putative protease	Family U32 unassigned peptidase	putative protease	Putative protease yhbU	similar to GP:15158837; identified by sequence similarity; putative peptidase, U32 family	Protease, putative	Peptidase, U32 family	Putative protease	glimmer prediction; conserved hypothetical protease Conserved hypothetical protein	Peptidase, U32 family	PROTEASE	Putative protease	Putative collagenase	Putative protease, putative	Collagenase	Residues 10 to 340 of 340 are 100 pct identical to residues 1 to 331 of a 331 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289734.1 putative collagenase	Putative protease	Probable peptidase u32; protein	Probable protease	IPR001539: Peptidase U32 putative protease	similar to Salmonella typhi CT18 putative protease putative protease	similar to BRA0290, peptidase, U32 family peptidase, U32 family	Putative protease	putative protease YhbU precursor	Collagenase family protease	
ECOLI03042	Uncharacterized protein yhbV	Putative uncharacterized protein	Collagenase	Putative uncharacterized protein	Putative uncharacterized protein STY3458	Putative uncharacterized protein	putative protease	Hypothetical protein yhbV	similar to GP:15158836; identified by sequence similarity; putative protease, putative	Putative uncharacterized protein VC0651	Putative uncharacterized protein	Putative uncharacterized protein	glimmer prediction; conserved putative protease Conserved hypothetical protein	Putative uncharacterized protein	PROTEASE	Putative protease	Putative uncharacterized protein yhbV	Putative uncharacterized protein	Collagenase	Residues 1 to 292 of 292 are 98 pct identical to residues 7 to 298 of a 298 aa protein from Escherichia coli O157:H7 ref: NP_312067.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative peptidase u32; protein	Putative uncharacterized protein	IPR001539: Peptidase U32 putative protease	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	similar to BRA0289, protease, hypothetical hypothetical protease	Putative uncharacterized protein	COG0826 collagenase	putative protease YhbV precursor	
ECOLI03043	Uncharacterized protein yhbW	Putative uncharacterized protein	Putative LuxAB-like protein	Putative uncharacterized protein	Putative uncharacterized protein	Flavin dependant oxidoreductase	Possible monooxygenase	Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin- dependent oxidoreductases	Luciferase-like monooxygenase	Lkanal monooxygenase homolog yvbT	Hypothetical protein yhbW	identified by match to PFAM protein family HMM PF00296 bacterial luciferase family protein	pseudo	pseudo	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE OXIDOREDUCTASE PROTEIN	Bacterial luciferase family protein	Putative uncharacterized protein	Putative monooxygenase	Luciferase-like monooxygenase	ALKANAL MONOOXYGENASE ALPHA CHAIN	Putative uncharacterized protein	Putative enzyme	CDS_ID OB3100 hypothetical protein	similar to AX066083-1|CAC26281.1| percent identity: 84 in 325 aa conserved hypothetical protein	SCBAC17F8.07, conserved hypothetical protein, len: 366 aa; similar to many e.g. TR:Q9I0Z9 (EMBL:AE004676) hypothetical protein from Pseudomonas aeruginosa (333 aa) fasta scores; opt: 588, Z-score: 637.0, 47.826% identity (50.305% ungapped)in 345 aa overlap conserved hypothetical protein	Residues 1 to 335 of 335 are 99 pct identical to residues 1 to 335 of a 335 aa protein from Escherichia coli K12 ref: NP_417629.1 putative enzyme	Putative uncharacterized protein	Probable flavin dependant oxidoreductase	identified by match to protein family HMM PF00296 bacterial luciferase family protein	
ECOLI03044	Tryptophan-specific transport protein	Tryptophan permease	Probable amino acid permease	Tryptophan-specific transport protein	Tryptophan-specific transport protein	Tryptophan-specific transport protein	Tryptophan-specific transport protein	Tryptophan-specific transport protein	Residues 1 to 414 of 414 are 100 pct identical to residues 1 to 414 of a 414 aa protein from Escherichia coli K12 ref: NP_417630.1 tryptophan-specific transport protein	IPR002091: Aromatic amino acid permease; IPR002422: Amino acid/polyamine transporter, family II HAAAP family, tryptophan-specific transport protein	similar to Salmonella typhi CT18 probable amino acid permease probable amino acid permease	Amino acid permeases SdaC protein	HAAAP family tryptophan-specific transport protein	Best Blastp Hit: pir||E81013 tryptophan transporter NMB2031 [imported] - Neisseria meningitidis (group B strain MD58) >gi|7227293|gb|AAF42353.1| (AE002553) tryptophan transporter [Neisseria meningitidis MC58] COG0814 Amino acid permeases; TnaB putative tryptophan transport protein, tryptophan permease	Code: E; COG: COG0814 tryptophan-specific transport protein	Code: E; COG: COG0814 tryptophan-specific transport protein	Code: E; COG: COG0814 tryptophan-specific transport protein	Tryptophan-specific transport protein	Aromatic amino acid transport protein precursor	Aromatic amino acid transporter precursor	Aromatic amino acid transporter precursor	Tryptophan-specific transport protein	aromatic amino acid transporter TIGRFAM: aromatic amino acid transporter PFAM: aromatic amino acid permease; Amino acid transporter, transmembrane KEGG: sfr:Sfri_0262 aromatic amino acid transporter	aromatic amino acid transporter TIGRFAM: aromatic amino acid transporter PFAM: aromatic amino acid permease KEGG: son:SO4601 tryptophan-specific transport protein	tryptophan permease	Aromatic amino acid transporter	tryptophan-specific transport protein Code: E; COG: COG0814	aromatic amino acid transporter TIGRFAM: aromatic amino acid transporter PFAM: aromatic amino acid permease; Amino acid transporter, transmembrane KEGG: son:SO4601 tryptophan-specific transport protein	Aromatic amino acid transporter precursor	
ECOLI03045	Cold-shock DEAD box protein A	ATP-dependent rRNA helicase spb4 [Source:GeneDB_Spombe;Acc:SPBC24C6.02]	ATP-dependent RNA helicase	ATP-dependent RNA helicase	Cold-shock DEAD box protein A homolog	ATP-dependent RNA helicase DeaD	Probable ATP-dependent RNA helicase DeaD	Putative ATP-dependent RNA helicase	ATP-dependent RNA helicase	ATP-dependent RNA helicase, DEAD/DEAH box family	DeaD	Probable ATP-dependent RNA helicase	DNA and RNA helicase	Cold-shock dead-box protein A	ATP-dependent RNA helicase	DEAD-box ATP-dependent RNA helicase cshA	Probable ATP-dependent RNA helicase	Lmo0866 protein	Superfamily II DNA and RNA helicases	DEAD-box ATP-dependent RNA helicase cshA	DEAD-box ATP-dependent RNA helicase cshA	putative ATP-dependent RNA helicase	Cold-shock DEAD box protein A	identified by match to protein family HMM PF00270; match to protein family HMM PF00271 ATP-dependent RNA helicase, DEAD/DEAH box family	similar to GP:15159093, and SP:P23304; identified by sequence similarity; putative ATP-dependent RNA helicase, DEAD/DEAH box family	ATP-dependent RNA helicase, DEAD/DEAH family	ATP-dependent RNA helicase DeaD	ATP-dependent RNA helicase DeaD	ATP-independent RNA helicase	
ECOLI03046	Lipoprotein nlpI	Putative uncharacterized protein	Lipoprotein NlpI	Putative uncharacterized protein STY3462	hypothetical lipoprotein precursor, NlpI	Lipoprotein nlpI precursor	Putative uncharacterized protein VC0648	TPR domain protein	Lipoprotein	Putative lipoprotein	Lipoprotein nlpI	Lipoprotein NlpI	Residues 1 to 248 of 248 are 100 pct identical to residues 47 to 294 of a 294 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289739.1 putative control proteins	Lipoprotein NlpI	Lipoprotein NlpI	IPR001440: TPR repeat lipoprotein, cell division	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Lipoprotein NlpI	lipoprotein NlpI	Similar to: HI0230, NLPI_HAEIN lipoprotein NlpI	TPR-repeat-containing proteins NrfG protein	contains TPR repeats NlpI-like lipoprotein	Lipoprotein, cell division	identified by similarity to OMNI:SO1210; match to protein family HMM PF00515; match to protein family HMM PF07719 TPR domain protein	lipoprotein NlpI homolog	Code: R; COG: COG4785 putative control proteins	Evidence 2b : Function of strongly homologous gene; PubMedId : 10400590, 15047720; Product type f : factor lipoprotein probably involved in cell division after interaction with a protease	Code: R; COG: COG4785 putative control proteins	conserved hypothetical protein	
ECOLI03047	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	similar to GB:Y00064, SP:P05060,  and PID:36439; identified by sequence similarity; putative polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	Polyribonucleotide nucleotidyltransferase	

ECOLI03048	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	similar to GB:M37191,  and PID:553634; identified by sequence similarity; putative ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	30S ribosomal protein S15	
ECOLI03049	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	Probable tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	Probable tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	Probable tRNA pseudouridine synthase B	Probable tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	Probable tRNA pseudouridine synthase B	Probable tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	Probable tRNA pseudouridine synthase B	Probable tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B	
ECOLI03050	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	identified by match to TIGR protein family HMM TIGR00082 ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	Ribosome-binding factor A	putative ribosome-binding factor A	Ribosome-binding factor A	
ECOLI03051	Translation initiation factor IF-2	hypothetical protein;similar to translation initiation factor if-2;	GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes and ribosomal subunit joining; homolog of bacterial IF2.  [Source:SGD;Acc:S000000033]	similar to DEHA0C03773g Debaryomyces hansenii IPF 2291.1, start by similarity	Translation initiation factor IF-2	Translation initiation factor IF-2, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC1271.15c]	similar to sp|P39730 Saccharomyces cerevisiae YAL035w FUN12 general translation factor eIF2 homolog, start by similarity	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	highly similar to uniprot|P39730 Saccharomyces cerevisiae YAL035w FUN12;	DEHA2C03234p;similar to uniprot|P25038 Saccharomyces cerevisiae YOL023W IFM1 Mitochondrial translation initiation factor 2;	similar to GB:M96759, GB:L07894, SP:Q03395, PID:292431,  and PID:292433; identified by sequence similarity; putative translation initiation factor 2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	Translation initiation factor IF-2	
ECOLI03052	Transcription elongation protein nusA	N utilization substance protein A	N utilization substance protein A	N utilization substance protein A	N utilization substance protein	N utilization substance protein A	Transcription elongation protein nusA	Transcription elongation protein nusA	Transcription elongation protein nusA	similar to GB:M74179, GB:M74178, SP:P26927, PID:1311661, PID:183977,  and PID:398038; identified by sequence similarity; putative N utilization substance protein A	Putative nitrogen utilization substance protein	N utilization substance protein A, putative	Putative transcriptional termination/antitermination factor	N utilization substance homolog	N utilization substance protein A	N utilization substance protein A	Probable transcriptional terminator	N utilization substance protein A	N utilization substance protein A	Transcription elongation protein nusA	N utilization substance protein A	NusA	N utilization substance protein A	Transcription termination factor	N utilization substance protein A	N utilization substance protein A	N-utilization substance protein A	Probable transcription termination factor nusA	N utilization substance protein A	
ECOLI03053	UPF0090 protein yhbC	UPF0090 protein GSU1585	UPF0090 protein PD_0192	UPF0090 protein slr0742	UPF0090 protein XCC2513	UPF0090 protein HI1282	UPF0090 protein aq_260	UPF0090 protein SYNW0601	UPF0090 protein CPE1690	UPF0090 protein EF_1270	UPF0090 protein CC_0045	UPF0090 protein RC0818	UPF0090 protein NMB1641	UPF0090 protein PM0761	UPF0090 protein PA4746	UPF0090 protein TM_1778	UPF0090 protein VV2710	UPF0090 protein DR_1796	UPF0090 protein TT_C0350	UPF0090 protein yhbC	Ribosome maturation factor rimP	Ribosome maturation factor rimP	Ribosome maturation factor rimP	Ribosome maturation factor rimP	Ribosome maturation factor rimP	Ribosome maturation factor rimP	Ribosome maturation factor rimP	conserved hypothetical protein	UPF0090 protein yhbC	
ECOLI03054	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	Argininosuccinate synthase	SC4G1.02, argG, argininosuccinate synthase, len: 481 aa; identical to previously sequenced SW:ASSY_STRCO (EMBL:D00799) Streptomyces coelicolor argininosuccinate synthase (EC 6.3.4.5) ArgG, 480 aa. Contains Pfam match to entry PF00764 Arginosuc_synth, Arginosuccinate synthase and matches to Prosite entries PS00564 Argininosuccinate synthase signature 1 and PS00565 Argininosuccinate synthase signature 2 argininosuccinate synthase	Residues 1 to 447 of 447 are 99 pct identical to residues 1 to 447 of a 447 aa protein from Escherichia coli K12 ref: NP_417640.1 argininosuccinate synthetase	Argininosuccinate synthase	Argininosuccinate synthase	IPR001518: Argininosuccinate synthase argininosuccinate synthetase	similar to Salmonella typhi CT18 argininosuccinate synthetase argininosuccinate synthetase	Argininosuccinate synthase	Argininosuccinate synthase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme argininosuccinate synthetase	citrulline--aspartate ligase; Similar to: HI1727, ASSY_HAEIN argininosuccinate synthase	Argininosuccinate synthase ArgG protein	Argininosuccinate synthase	
ECOLI03055	UPF0141 inner membrane protein yhbX	Outer-membrane protein yhbX	Putative outer membrane protein	Putative outer membrane protein	Putative outer membrane protein	Putative phosphoethanolamine transferase yhbX	Putative uncharacterized protein	Best Blastp Hit: gb|AAF42335.1| (AE002550) YhbX/YhjW/YijP/YjdB family protein [Neisseria meningitidis MC58] COG2194 Predicted membrane-associated conserved hypothetical protein	Code: R; COG: COG2194 putative alkaline phosphatase I	Code: R; COG: COG2194 putative alkaline phosphatase I	Code: R; COG: COG2194 putative alkaline phosphatase I	Outer membrane protein YhbX	putative alkaline phosphatase I	Sulfatase	Inner membrane protein yhbX	Predicted hydrolase, inner membrane	Inner membrane protein yhbX	Sulfatase precursor	Inner membrane protein yhbX	Putative membrane-associated sulfatase	Inner membrane protein YhbX	Inner membrane protein yhbX	Putative alkaline phosphatase I	Putative hydrolase, inner membrane	Putative hydrolase, inner membrane	Putative hydrolase, inner membrane	Putative hydrolase, inner membrane	Putative hydrolase, inner membrane	Predicted hydrolase, inner membrane	
ECOLI03056	Protein-export membrane protein secG	Protein-export membrane protein secG	Protein-export membrane protein secG	Protein-export membrane protein SecG	Protein-export membrane protein secG	Preprotein translocase subunit SecG	Protein-export membrane protein	Related to secretion protein SecG	putative protein export-membrane protein	Protein-export membrane protein secG	Preprotein translocase, SecG subunit	Preprotein translocase, SecG subunit	Preprotein translocase, SecG subunit	Protein-export membrane protein	Protein-export membrane protein secG	Preprotein translocase, SecG subunit	Protein-export membrane protein secG	Protein translocase subunit	Possible secG: preprotein translocase	Protein-export membrane protein secG	Preprotein translocase subunit SecG	Residues 1 to 110 of 110 are 99 pct identical to residues 1 to 110 of a 110 aa protein from Escherichia coli O157:H7 ref: NP_312081.1 protein-export protein SecG	Protein-export membrane protein	SecG protein	Putative-export membrane protein secg (Translocase) transmembrane	Protein-export membrane protein SecG	Protein-export membrane protein secG (Preprotein translocase subunit)	conserved gene preprotein translocase, SecG subunit	Protein-export membrane protein secG (Preprotein translocase subunit)	
ECOLI03057	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	similar to GB:Z20656, GB:D00943, GB:M21664, GB:M27729, GB:X05632, GB:M55666, GB:M55329, GB:M25162, GB:M25140, GB:M25141, GB:M25142, SP:P12883, SP:P13533, PID:219524, PID:28319, PID:297024, PID:386971, PID:553597, PID:601916, PID:622994,  and PID:825694; identified by sequence similarity; putative phosphoglucomutase/phosphomannomutase family protein	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphomannomutase related protein	Phosphoglucosamine mutase	Phosphohexose mutase	Phospho-sugar mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	Phosphoglucosamine mutase	
ECOLI03058	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate pyrophosphorylase	Dihydropteroate synthase	Dihydropteroate synthase related protein	Dihydropteroate synthase	Dihydropteroate synthase	Putative dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	FolP	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	Dihydropteroate synthase	
ECOLI03059	Cell division protease ftsH	Protein YME1 homolog [Source:GeneDB_Spombe;Acc:SPCC965.04c]	Cell division protein ftsH	Cell division protein FtsH	Cell division protein	i-AAA protease, putative	Cell division protease ftsH homolog 2	Cell division protein	Cell division protease ftsH homolog	Cell division protease ftsH homolog 1	Putative cell division protein FtsH	Cell division protease ftsH homolog	Cell division protein FtsH2	Cell division protein FtsH	Cell division protease ftsH homolog	FtsH	Cell division protein FtsH	ATP-dependent Zn protease	Cell division protein ftsH	Cell division protein ftsH	Metalloprotease	Cell division protease ftsH	Cell division protein	Cell division protein FtsH	FtsH protein	Cell division protease ftsH homolog	Cell division protein ftsH	Cell division protein	FtsH endopeptidase	
ECOLI03060	Ribosomal RNA large subunit methyltransferase J	tRNA (uridine-2'-O-)-methyltransferase TRM7;	Mitochondrial 2' O-ribose methyltransferase, required for methylation of U(2791) in 21S rRNA; MRM2 deletion confers thermosensitive respiration and loss of mitochondrial DNA; has similarity to Spb1p and Trm7p, and to E. coli FtsJ/RrmJ. [Source:SGD;Acc:S000003104]	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	ribosomal RNA methyltransferase, putative	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	putative RIBOSOMAL RNA METHYLTRANSFERASE;09_0920, putative RIBOSOMAL RNA METHYLTRANSFERASE, YEK3_SCHPO, gene found by Glimmer;	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Cell division protein	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J (EC 2.1.1.-) (rRNA	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase J	Ribosomal RNA large subunit methyltransferase E	Ribosomal RNA large subunit methyltransferase E	Ribosomal RNA large subunit methyltransferase E	
ECOLI03061	RNA-binding protein yhbY	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	RNA-binding protein HI1333	Predicted RNA-binding protein containing KH domain, possibly ribosomal protein	Putative uncharacterized protein	Putative uncharacterized protein CPE2126	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Probable RNA-binding protein PA4753	Predicted RNA-binding protein	Putative uncharacterized protein STY3476	Putative RNA-binding protein, YhbY family	Putative uncharacterized protein	Lmo1489 protein	Putative uncharacterized protein	putative RNA-binding protein	RNA-binding protein yhbY	Putative uncharacterized protein	identified by match to protein family HMM PF01985; match to protein family HMM TIGR00253 conserved hypothetical protein TIGR00253	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical conserved protein	Putative uncharacterized protein	
ECOLI03062	Transcription elongation factor greA	Transcription elongation factor	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor	Transcription elongation factor greA	Transcription elongation factor GreA	Transcription elongation factor greA	Transcription elongation factor	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor	Transcription elongation factor	Transcription elongation factor	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor greA	Transcription elongation factor	
ECOLI03063	D-alanyl-D-alanine carboxypeptidase dacB	D-alanyl-D-alanine carboxypeptidase dacB	Penicillin-binding protein, D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein 3	DacB	Probable D-alanyl-D-alanine carboxypeptidase	D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein	Related to penicillin-binding protein 4	Putative carboxypeptidase	D-alanyl-D-alanine carboxypeptidase	Family S13 unassigned peptidase	hypothetical D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	D-Ala-D-Ala carboxypeptidase 3 (S13) family	Penicillin-binding protein 4	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D- alanine-endopeptidase	Probable D-alanyl-D-alanine carboxypeptidase	Probable D-alanyl-D-alanine carboxypeptidase	Penicillin-binding protein 4	Penicillin-binding protein	D-alanyl-D-alanine carboxypeptidase	Probable D-alanyl-D-alanine carboxypeptidase	D-alanyl-D-alanine carboxypeptidase	Putative penicillin binding protein	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D- alanine-endopeptidase	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D- alanine-endopeptidase	D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin-binding protein 4	similar to Z95436-9|CAB08829.1| percent identity: 41 in 414 aa putative D-alanyl-D-alanine carboxypeptidase	D-alanyl-meso-diaminopimelate endopeptidase	
ECOLI03064	Uncharacterized GTP-binding protein yhbZ	Uncharacterized GTP-binding protein P8A3.11c, mitochondrial [Source:GeneDB_Spombe;Acc:SPAP8A3.11c]	SPO0B-associated GTP-binding protein	GTP-binding protein, GTP1/OBG family	GTP-binding protein	GTP-binding protein	GTP-binding protein	Uncharacterized GTP-binding protein MG384	Uncharacterized GTP-binding protein MG384 homolog	Uncharacterized GTP-binding protein HI0877	identified by match to PFAM protein family HMM PF03029 GTP-binding protein, GTP1/Obg family	GTP-binding protein	GTP-binding protein Obg	Putative GTP-binding protein	GTP-binding protein	GTP-binding protein	GTP1/Obg family GTP-binding protein	GTP1/OBG family	Spo0B associated GTP-binding protein	GTP-binding protein	GTP-binding protein CgtA	GTP-binding protein	GTP-binding protein	Putative uncharacterized protein	GTP-binding protein Obg	GTP-binding protein	Putative uncharacterized protein	GTP1/Obg family protein	GTP-binding protein Obg	
ECOLI03065	Uncharacterized inner membrane transporter yhbE	Putative uncharacterized protein	Putative membrane protein	Alr1538 protein	putative membrane protein	Hypothetical transport protein yhbE	Integral membrane domain protein	Putative membrane protein	Membrane spanning protein	Membrane protein, putative	hypothetical protein	Uncharacterized inner membrane transporter yhbE	Residues 1 to 321 of 321 are 100 pct identical to residues 1 to 321 of a 321 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289758.1 orf, conserved hypothetical protein	Putative membrane protein	IPR000620: Protein of unknown function DUF6 putative membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative amino acid efflux protein, DMT superfamily	Hypothetical protein	Similar to: HI0878, YHBE_HAEIN conserved hypothetical transport protein	Membrane protein, putative	identified by match to protein family HMM PF00892 membrane protein	identified by match to protein family HMM PF00892 membrane protein, putative	identified by match to protein family HMM PF00892 membrane protein, putative	Protein of unknown function DUF6	Best Blastp Hit: gb|AAF41818.1| (AE002495) conserved hypothetical protein [Neisseria meningitidis MC58] COG0697 Predicted permeases conserved hypothetical protein	Code: GER; COG: COG0697 conserved hypothetical protein	Code: GER; COG: COG0697 conserved hypothetical protein	Protein of unknown function DUF6, transmembrane	conserved hypothetical protein	
ECOLI03066	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	identified by match to TIGR protein family HMM TIGR00062 ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	50S ribosomal protein L27	
ECOLI03067	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	similar to GB:X03072, SP:P04628,  and PID:33936; identified by sequence similarity; putative ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	50S ribosomal protein L21	
ECOLI03068	Octaprenyl-diphosphate synthase	Octaprenyl-diphosphate synthase	Prenyl transferase	Octaprenyl-diphosphate synthase	Octaprenyl-diphosphate synthase	DEHA2E23870p;weakly similar to uniprot|Q12051 Saccharomyces cerevisiae YPL069C BTS1 Geranylgeranyl diphosphate synthase increases the intracellular pool of geranylgeranyl diphosphate suppressor of bet2 mutation that causes defective geranylgeranylation of small GTP- binding proteins that mediate vesicular traffic and similar to CA4277|CaBTS1 Candida albicans CaBTS1;	Farnesyl pyrophosphate synthase	Octaprenyl-diphosphate synthase	Polyprenyl synthetase	Putative polyprenyl diphosphate synthase	Octoprenyl-diphosphate synthase	Polyprenyl synthetase; solanesyl diphosphate synthase	Bifunctional short chain isoprenyl diphosphate synthase related protein	Farnesyl pyrophosphate synthetase, geranyltransferase/farnesyltransferase/hexaprenyl diphosphate synthase	Polyprenyl synthetase; solanesyl diphosphate synthase	Polyprenyl synthetase family protein	Octaprenyl-diphosphate synthase	IspB	Octoprenyl-diphosphate synthase, putative	Geranylgeranyl pyrophosphate synthase	Polyprenyl synthase	Octoprenyl-diphosphate synthase	Octaprenyl-diphosphate synthase	Octaprenyl-diphosphate synthase	Octaprenyl-diphosphate synthase	Solanesyl diphosphate synthase	Heptaprenyl diphosphate synthase component II	Lmo1930 protein	Polyprenyl diphosphate synthase component	
ECOLI03069	Sugar fermentation stimulation protein B	Ner	Ner-like regulatory protein	Sugar fermentation stimulation protein B	Transcriptional regulator, Ner family	Sugar fermentation stimulation protein B	Residues 1 to 92 of 92 are 100 pct identical to residues 1 to 92 of a 92 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289762.1 regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu	Putative DNA-binding protein	similar to Ner repressor protein of phage Mu regulatory factor of maltose metabolism	similar to Salmonella typhi CT18 Ner-like regulatory protein Ner-like regulatory protein	Ner-like DNA-binding protein	Regulatory factor of maltose metabolism	possible DNA-binding protein	Code: K; COG: COG3423 regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu	similar to Ner repressor protein of phage Mu; Code: K; COG: COG3423 regulatory factor of maltose metabolism	conserved hypothetical protein	similar to Ner repressor protein of phage Mu; Code: K; COG: COG3423 regulatory factor of maltose metabolism	Sugar fermentation stimulation protein B	Sugar fermentation stimulation protein B	Putative DNA-binding protein	regulatory factor of maltose metabolism Code: K; COG: COG3423	putative transcriptional regulator, Nlp KEGG: sgl:SG0361 hypothetical protein	sugar fermentation stimulation protein B putative regulatory factor of maltose metabolism	Putative transcriptional regulator, Nlp	Regulatory factor of maltose metabolism	Putative uncharacterized protein	Sugar fermentation stimulation protein B	Putative transcriptional regulator, Nlp	Mu-like prophage FluMu DNA-binding protein Ner	
ECOLI03070	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	
ECOLI03071	Uncharacterized protein yrbA	Uncharacterized protein HI1082	Putative uncharacterized protein	Putative uncharacterized protein	Predicted transcriptional regulator	Putative uncharacterized protein STY3487	putative BolA/YrbA family protein, transcriptional regulator	Protein yrbA	BolA/YrbA family protein	BolA/YrbA family protein	Putative bolA family protein	Uncharacterized protein BUsg_372	Toluene tolerance protein, putative	hypothetical protein	BolA/YrbA family protein	Putative uncharacterized protein yrbA	Uncharacterized protein BU385	BolA/YrbA family protein	Residues 1 to 89 of 89 are 100 pct identical to residues 1 to 89 of a 89 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289764.1 orf, conserved hypothetical protein	BolA-like protein	YrbA protein	Similar to unknown protein YrbA of Escherichia coli	Similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical BolA like protein	Similar to conserved hypothetical protein hypothetical protein	hypothetical protein	BolA-like protein; transcription regulator activity	IPR002634: BolA-like protein putative transcriptional regulator (BolA family)	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	
ECOLI03072	Uncharacterized protein yrbB	Hypothetical protein yrbB	Putative uncharacterized protein	Putative anti-sigma B factor antagonist	Putative uncharacterized protein yrbB	Residues 1 to 130 of 130 are 98 pct identical to residues 1 to 130 of a 130 aa protein from Escherichia coli K12 gi: 1789582 orf, conserved hypothetical protein	Putative anti-sigma B factor antagonist	Similar to unknown protein YrbB of Escherichia coli	IPR002645: Sulfate transporter/antisigma-factor antagonist STAS putative STAS domain	similar to Salmonella typhi CT18 possible anti-sigma factor antagonist possible anti-sigma factor antagonist	Putative anti-sigma B factor antagonist	Putative STAS domain protein	Code: R; COG: COG3113 conserved hypothetical protein	Code: R; COG: COG3113 conserved hypothetical protein	putative anti-sigma-B factor antagonist	Code: R; COG: COG3113; orf conserved hypothetical protein	Putative uncharacterized protein	Putative anti-sigma B factor antagonist	Putative uncharacterized protein yrbB	Anti-sigma B factor antagonist	Putative anti-sigma B factor antagonist	conserved hypothetical protein Code: R; COG: COG3113	Anti-sigma B factor antagonist	Putative STAS domain	Putative uncharacterized protein yrbB	Putative uncharacterized protein	YrbB	Anti-sigma-factor antagonist	Anti-sigma-factor antagonist	
ECOLI03073	Protein yrbC	Toluene tolerance protein	Toluene tolerance protein	Uncharacterized protein HI1084	Putative uncharacterized protein	Putative uncharacterized protein	ABC-type transport system, auxiliary component	Possible exported protein	Putative exported protein	conserved hypothetical protein	Protein yrbC	Putative uncharacterized protein	Putative exported protein	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein VP2661	Putative uncharacterized protein yrbC	ABC-type transport system involved in resistance to organic solvents, auxiliary component	Residues 1 to 211 of 211 are 100 pct identical to residues 1 to 211 of a 211 aa protein from Escherichia coli K12 ref: NP_417659.1 orf, conserved hypothetical protein	Putative exported protein	Putative signal peptide protein	Similar to YrbC protein of Escherichia coli	similar to unknown protein hypothetical protein	conserved gene signal peptide protein, toluene tolerance protein Ttg2D	similar to unknown protein hypothetical protein	Probable ABC superfamily, transport protein	
ECOLI03074	Uncharacterized protein yrbD	Toluene tolerance protein	Uncharacterized protein HI1085	ABC transporter substrate binding protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	ABC-type transport system, periplasmic component	Possible exported protein	Putative uncharacterized protein	Putative membrane protein	putative ABC superfamily transport protein	Hypothetical protein yrbD	Putative uncharacterized protein	Putative uncharacterized protein	Mce related protein	Mce related protein	Mce-related protein	Putative exported protein	Mce-related protein	Mce related protein	ABC transporter, periplasmic substrate-binding protein	Putative ABC superfamily transport protein	Probable phospholipid ABC transporter-binding protein mlaD	ABC-type transport system involved in resistance to organic solvents, periplasmic component	Putative uncharacterized protein RP724	Residues 6 to 188 of 188 are 100 pct identical to residues 1 to 183 of a 183 aa protein from Shigella flexneri gb: AAF21248.1 VpsC	Putative membrane protein	Mce related protein	
ECOLI03075	UPF0393 inner membrane protein yrbE	Putative uncharacterized protein	Toluene tolerance protein	UPF0393 membrane protein HI1086	ABC transporter, permease protein, putative	UPF0393 membrane protein RC0129	Putative uncharacterized protein	Putative uncharacterized protein	Probable permease of ABC transporter	ABC-type transport system, permease component	Putative membrane protein	Related to toluene ABC-transporter, permease protein	Putative membrane protein	conserved hypothetical protein	UPF0393 inner membrane protein yrbE	ABC transporter, permease protein, putative	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	PMID: 10984043 best DB hits: BLAST: pir:G71718; hypothetical protein RP096 - Rickettsia prowazekii; E=4e-38 pir:E70331; conserved hypothetical protein aq_355 - Aquifex aeolicus; E=6e-37 pir:S74989; hypothetical protein slr1045 - Synechocystis sp. (strain; E=5e-35 COG: RP096; COG0767 Permease component of an ABC-transporter; E=3e-39 PFAM: PF02405; Domain of unknown function DUF140; E=4.8e-79 probable permease of ABC transporter	Membrane protein, putative	Putative membrane protein	ABC TRANSPORTER, PERMEASE PROTEIN	ABC transporter, permease protein	Putative ABC superfamily transport protein	Probable phospholipid ABC transporter permease protein mlaE	Putative uncharacterized protein	
ECOLI03076	Uncharacterized ABC transporter ATP-binding protein yrbF	Putative ABC transporter ATP-binding protein	Putative uncharacterized protein	Probable ATP-binding component of ABC transporter	ABC-type transport system, ATPase component	Possible ABC-transport protein, ATP-binding component	Probable ribonucleotide transport ATP-binding protein mkl	putative ABC transporter, ATP-binding protein	Hypothetical ABC transporter ATP-binding protein yrbF	ABC transporter, ATP-binding protein	Putative ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein, putative	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Probable phospholipid import ATP-binding protein mlaF	SCC42.03c, possible ABC-transporter ATP-binding protein, len: 343 aa; similar to SW:YRBF_HAEIN (EMBL:U32788) Haemophilus influenzae hypothetical ABC-transporter ATP-binding protein HI1087, 264 aa; fasta scores: opt: 680 z-score: 686.6 E(): 8.9e-31; 41.4% identity in 244 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature putative ABC-transporter ATP-binding protein	ABC-type transport system involved in resistance to organic solvents, ATPase component	Residues 1 to 269 of 269 are 99 pct identical to residues 1 to 269 of a 269 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289769.1 putative ATP-binding component of a transport system	Putative ABC transporter ATP-binding protein	Probable atp-binding abc transporter protein	Similar to ABC transporter	Similar to ABC transporter, ATP-binding protein hypothetical protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase putative ABC superfamily (atp_bind) transport protein	similar to Salmonella typhi CT18 possible ABC-transport protein, ATP-binding component possible ABC-transport protein, ATP-binding component	ABC transporter, ATP-binding subunit, toluene tolerance protein	Evidence 2b : Function of strongly homologous gene; Product type t : transporter toluene tolerance efflux transporter (ABC superfamily, atp_bind)	toluene tolerance protein TTG2A	Similar to: HI1087, YRBF_HAEIN conserved ABC-type transport system protein, ATPase component	Uncharacterized ABC-type transport system, ATPase component Hypothetical protein	
ECOLI03077	Inner membrane protein yrbG	Putative uncharacterized protein TVG0394567	NEQ486	Conserved hypothetical membrane protein	K+-dependent Na+/Ca+ exchanger related- protein:Sodium/calcium exchanger membrane region	Putative cation antiporter	Sodium/calcium exchanger protein	Putative membrane protein	putative Ca2+/Na+ antiporter	Hypothetical protein yrbG	Putative uncharacterized protein	Putative sodium/calcium exchanger protein	Putative sodium/calcium exchanger protein	Putative uncharacterized protein yrbG	Sodium-calcium exchanger	Ca2+/Na+ antiporter	Residues 1 to 321 of 321 are 98 pct identical to residues 1 to 325 of a 325 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289770.1 orf, conserved hypothetical protein	Putative sodium/calcium exchanger protein	sodium/calcium antiporter	Similar to putative Cation Antiporter	K+-dependent Na+/Ca+ exchanger related-protein	IPR004481: K+-dependent Na+/Ca+ exchanger related-protein; IPR004837: Sodium/calcium exchanger membrane region putative CacA family, Na:Ca transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative sodium/calcium exchanger protein, CaCA family	Na+/Ca+ exchange protein, putative	sodium-calcium exchanger	Ca2+/Na+ antiporter Hypothetical protein	Ca2+/Na+ antiporter	Putative CacA family Na:Ca transport protein	
ECOLI03078	Arabinose 5-phosphate isomerase	Polysialic acid capsule expression protein kpsF	Carbohydrate isomerase, KpsF/GutQ family	Polysialic acid capsule expression protein	Polysialic acid capsule expression protein	Uncharacterized phosphosugar isomerase aq_1546	Putative polysialic acid capsule expression protein KpsF	Sugar isomerase, KpsF/GutQ	Sugar isomerase, KpsF/GutQ family	Arabinose-5-phosphate isomerase KdsD	Putative polysialic acid capsule expression protein	Capsule expression protein	Arabinose 5-phosphate isomerase	Related to polysialic acid capsule expression protein	Putative uncharacterized protein	hypothetical sugar phosphate isomerase	Arabinose 5-phosphate isomerase	Carbohydrate isomerase, KpsF/GutQ family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Carbohydrate isomerase, KpsF/GutQ family	Putative uncharacterized protein	Sugar isomerase, KpsF/GutQ	Putative uncharacterized protein	Uncharacterized protein HP_1429	Carbohydrate isomerase, KpsF/GutQ family	Putative polysialic acid capsule expression protein	Arabinose 5-phosphate isomerase	
ECOLI03079	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	Phosphatase, YrbI family	Putative uncharacterized protein	Putative uncharacterized protein	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	Putative uncharacterized protein	Putative uncharacterized protein	Possible phosphatase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative HAD-superfamily hydrolase	Low specificity phosphatase	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	Putative uncharacterized protein	Putative hydrolase	Putative uncharacterized protein	putative low specificity phosphatase	Putative uncharacterized protein	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	Phosphatase, YrbI family	Putative uncharacterized protein	Probable hydrolase	Probable hydrolase	Putative uncharacterized protein	Putative uncharacterized protein	best DB hits: BLAST: pir:B82065; conserved hypothetical protein VC2524 [imported] -; E=9e-28 embl:CAC12689.1; (AJ272115) hypothetical protein [Thauera; E=6e-26 pir:B83087; conserved hypothetical protein PA4458 [imported] -; E=7e-26 COG: VC2524; COG1778 Uncharacterized proteins of HAD superfamily,; E=8e-29 APE0766; COG0561 Predicted hydrolases of the HAD superfamily; E=6e-05 conserved hypothetical protein	Phosphatase, YrbI family	Probable hydrolase	
ECOLI03080	Lipopolysaccharide export system protein lptC	Putative uncharacterized protein	Putative uncharacterized protein VV0451	Possible exported protein	conserved hypothetical protein	Hypothetical protein yrbK	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein VP2667	Lipopolysaccharide export system protein lptC	Putative uncharacterized protein	Residues 1 to 191 of 191 are 100 pct identical to residues 1 to 191 of a 191 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289773.1 orf, conserved hypothetical protein	Putative exported protein	YrbK protein	Similar to YrbK protein of Escherichia coli	Possible exported protein	putative inner membrane protein	similar to Salmonella typhi CT18 possible exported protein possible exported protein	Putative exported protein	probable exported protein [imported]	Similar to: HI1150, YRBK_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved secreted protein	Putative inner membrane protein	identified by similarity to OMNI:SO3958; match to protein family HMM PF06835 conserved hypothetical protein	conserved hypothetical protein	ortholog to Escherichia coli bnum: b3199 possible exported protein	Code: S; COG: COG3117 conserved hypothetical protein	
ECOLI03081	Lipopolysaccharide export system protein lptA	Putative uncharacterized protein	Lipopolysaccharide export system protein lptA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV0450	Putative uncharacterized protein STY3497	hypotetical protein yhbN precursor	Protein yhbN precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	OstA family protein	Putative ABC superfamily transport protein	Lipopolysaccharide export system protein lptA	Putative uncharacterized protein	Residues 8 to 192 of 192 are 100 pct identical to residues 1 to 185 of a 185 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289774.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative signal peptide protein	Similar to YhbN protein of Escherichia coli	Similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	Similar to conserved hypothetical protein hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	OstA-like protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR005653: OstA-like protein putative ABC superfamily (bind_prot) transport protein	
ECOLI03082	Lipopolysaccharide export system ATP-binding protein lptB	Lipopolysaccharide export system ATP-binding protein lptB	NEQ074	Putative uncharacterized protein	Probable ATP-binding component of ABC transporter	ABC-type transport system, ATPase component	Probable ABC transport protein, ATP-binding component	putative ABC transporter, ATP-binding protein	Probable ABC transporter ATP-binding protein yhbG	Putative ABC transporter ATP-binding protein	ABC transporter	ABC transporter	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding component	ABC transporter, ATP-binding protein	ABC transporter	probable ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Lipopolysaccharide export system ATP-binding protein lptB	ABC-type transport system, ATPase component	Residues 1 to 241 of 241 are 100 pct identical to residues 1 to 241 of a 241 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289775.1 putative ATP-binding component of a transport system	Probable ABC transporter ATP-binding protein	Probable ABC transporter ATP-binding protein yhbG	Similar to ABC transporter, ATP-binding protein hypothetical protein	conserved gene ABC transporter, ATP binding protein	Similar to ABC transporter, ATP-binding protein hypothetical protein	identified by similarity to GB:AAM48706.1; match to protein family HMM PF00005 ABC transporter, ATP-binding protein	Probable ABC transporter, ATP-binding protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase putative ABC superfamily (atp_bind) transport protein	
ECOLI03083	RNA polymerase sigma-54 factor	RNA polymerase sigma-54 factor	RNA polymerase sigma-54 factor	identified by match to PFAM protein family HMM PF03267 RNA polymerase sigma factor, sigma-54 family	RNA polymerase sigma-54	RNA polymerase sigma-54 factor	RNA polymerase sigma factor RpoN	RNA polymerase sigma factor sigma54	RNA polymerase sigma-54 factor	RNA polymerase sigma-54 factor	RNA polymerase sigma-54 factor	RNA polymerase sigma-54 factor	DNA-directed RNA polymerase specialized sigma subunit	Transcription initiation factor sigma 54	RNA polymerase sigma-54 factor	RNA polymerase sigma-54 factor	RNA polymerase sigma-54 factor	Probable RNA polymerase sigma-54 factor	RNA polymerase sigma-54 factor	RNA polymerase sigma-54	RNA polymerase sigma-54 factor rpoN	RNA polymerase sigma-54 factor	Putative RNA polymerase sigma-54 factor	putative sigma factor N RpoN	RNA polymerase sigma-54 factor	Sigma factor 54	RNA polymerase sigma-54 factor	RNA polymerase sigma-54 factor	identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963 RNA polymerase sigma-54 factor	
ECOLI03084	Probable sigma(54) modulation protein	Sigma-54 modulation protein	Putative uncharacterized protein	Putative sigma-54 modulation protein	Probable sigma-54 modulation protein	Probable sigma(54) modulation protein	Putatve PTS system, EIIa component	putative sigma-54 modulation protein	Probable sigma(54) modulation protein	Putative sigma54 modulation protein	pseudo	Probable sigma(54) modulation protein	Ribosomal subunit interface protein	Putative sigma(54) modulation protein	Ribosomal subunit interface protein	Probable sigma(54) modulation protein	Ribosomal subunit interface protein	Putative sigma-54 modulation protein	Probable sigma(54) modulation protein	Ribosome-associated factor Y	Ribosome-associated protein Y	Putative sigma-54 modulation protein	Residues 1 to 95 of 95 are 100 pct identical to residues 1 to 95 of a 95 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289777.1 probable sigma-54 modulation protein	pseudo	Sigma 54 modulation protein , S30EA ribosomal protein	Putative sigma-54 modulation protein	Similar to probable sigma(54) modulation protein YhbH of Escherichia coli	similar to putative sigma-54 modulation protein hypothetical protein	conserved gene sigma-54 modulation protein	
ECOLI03085	Nitrogen regulatory protein	PTS system, IIA component	Nitrogen regulatory IIA protein	Nitrogen regulatory protein homolog	identified by match to TIGR protein family HMM TIGR00848 PTS system, IIA component	PTS system, IIA component	PTS system, nitrogen regulatory IIA component	PTS system, nitrogen regulatory IIA protein	PtsN	Nitrogen regulatory protein	Nitrogen regulatory IIA protein PtsN	Nitrogen regulatory IIA protein	Nitrogen regulatory IIA protein	Putative nitrogen regulatory IIA protein	putative nitrogen regulatory IIA protein PtsN	PTS IIA Protein	Nitrogen regulatory IIA protein	sugar hosphotransferase system IIA component	PTS system, IIA component	identified by match to PFAM protein family HMM PF00359 PTS system, nitrogen regulatory IIA component	PTS system,IIA component	PTS system, IIA component	PTS system, nitrogen regulatory IIA component	Nitrogen regulatory IIA protein	Nitrogen regulatory IIA protein	Nitrogen regulatory IIA protein	Putative nitrogen regulatory protein	best DB hits: BLAST: ddbj:BAB04547.1; (AP001510) PTS system, fructose-specific enzyme; E=6e-19 gb:AAK05057.1; AE006330_5 (AE006330) fructose-specific PTS system; E=9e-18 ddbj:BAB03332.1; (AB035450) fructose specific permease; E=1e-16 COG: BH0828_1; COG1762 Phosphotransferase system; E=3e-19 TP0085; COG1762 Phosphotransferase system mannitol/fructose-specific; E=5e-16 NMB0736; COG1762 Phosphotransferase system; E=7e-14 PFAM: PF00359; Phosphoenolpyruvate-dependent suga; E=3.6e-13 PTS system, fructose-specific enzyme II, BC component	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE NITROGEN REGULATORY IIA PROTEIN	
ECOLI03086	UPF0042 protein yhbJ	UPF0042 nucleotide-binding protein GSU1884	UPF0042 nucleotide-binding protein PD_0634	UPF0042 nucleotide-binding protein XCC2806	UPF0042 nucleotide-binding protein HI1146	UPF0042 nucleotide-binding protein SAV_6292	UPF0042 nucleotide-binding protein BL0705	UPF0042 nucleotide-binding protein CPE0354	UPF0042 nucleotide-binding protein EF_0766	UPF0042 nucleotide-binding protein NMB0738	UPF0042 nucleotide-binding protein PM0169	UPF0042 nucleotide-binding protein PA4465	UPF0042 protein VV0445	UPF0042 nucleotide-binding protein DR_1434	UPF0042 nucleotide-binding protein TT_C1664	UPF0042 nucleotide-binding protein yhbJ	UPF0042 nucleotide-binding protein BA_5384/GBAA_5384/BAS5004	UPF0042 nucleotide-binding protein lmo2474	UPF0042 nucleotide-binding protein Cgl1591/cg1794	UPF0042 nucleotide-binding protein ML0563	UPF0042 nucleotide-binding protein BC_5156	UPF0042 nucleotide-binding protein BT9727_4833	UPF0042 nucleotide-binding protein BPSL0529	conserved hypothetical protein	UPF0042 protein yhbJ	UPF0042 nucleotide-binding protein SP_1566	identified by match to protein family HMM PF03668 conserved hypothetical protein	UPF0042 nucleotide-binding protein DVU_1631	UPF0042 nucleotide-binding protein VC_2532	
ECOLI03087	Phosphocarrier protein NPr	Phosphocarrier protein HPr	Phosphotransferase system HPr enzyme	Phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein NPr	Phosphocarrier protein HPr	Phosphocarrier protein	putative phosphocarrier protein NPr	Phosphocarrier protein NPr	similar to GP:15072968, and SP:P08877; identified by sequence similarity; putative phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein NPr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein NPR	Phosphocarrier protein HPr	Phosphocarrier protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PHOSPHOCARRIER HPR TRANSMEMBRANE PROTEIN	Phosphocarrier protein HPr	Phosphocarrier protein HPr	PHOSPHOCARRIER PROTEIN HPR	Phosphocarrier protein NPr	Phosphocarrier protein NPr	Putative phosphocarrier protein hpr	phosphocarrier protein HPr	Phosphocarrier protein HPr	Phosphocarrier protein HPr	
ECOLI03089	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Multimodular transpeptidase-transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	hypothetical transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	similar to GP:10048284, GB:L10333, GB:L10334, GB:L10335, and PID:307311; identified by sequence similarity; putative monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Monofunctional biosynthetic peptidoglycan transglycosylase	Penicillin binding protein 1A	
ECOLI03088	Uncharacterized protein yrbL	Hypothetical protein yrbL	Putative uncharacterized protein yrbL	Residues 20 to 229 of 229 are 100 pct identical to residues 1 to 210 of a 210 aa protein from Escherichia coli K12 ref: NP_417674.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yrbL	hypothetical protein KEGG: ssn:SSO_3355 hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein KEGG: ssn:SSO_3355 hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03090	Enhancing lycopene biosynthesis protein 2	Es1 family protein	Putative uncharacterized protein	Sigma cross-reacting protein 27A	Putative uncharacterized protein STY3506	Putative uncharacterized protein	Enhancing lycopene biosynthesis protein 2, putative	putative sigma cross-reacting protein 27A	Enhancing lycopene biosynthesis protein 2	Enhancing lycopene biosynthesis protein 2	Sigma cross-reacting protein 27A	Enhancing lycopene biosynthesis protein	Enhancing lycopene biosynthesis protein 2	Enhancing lycopene biosynthesis protein 2	Sigma cross-reacting protein 27A	Sigma cross-reacting protein 27A	Uncharacterized protein	Residues 1 to 220 of 220 are 100 pct identical to residues 1 to 220 of a 220 aa protein from Escherichia coli K12 ref: NP_417676.1 sigma cross-reacting protein 27A (SCRP-27A)	Enhancing lycopene biosynthesis protein 2	Enhancing lycopene biosynthesis protein 2	IPR002818: Protein of unknown function ThiJ/PfpI sigma cross-reacting protein 27A (SCRP-27A)	Uncharacterized protein involved in an early stage of isoprenoid biosynthesis	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Enhancing lycopene biosynthesis protein 2	Similar to sp|P26428|ELBB_ECOLI; Ortholog to ERGA_CDS_09390 Enhancing lycopene biosynthesis protein 2	conserved hypothetical protein similar to NP_755835.1 hypothetical protein	Enhancing lycopene biosynthesis protein 2	Similar to Q87IN9 Sigma cross-reacting protein 27A from Vibrio parahaemolyticus (216 aa). FASTA: opt: 683 Z-score: 873.4 E(): 9.3e-41 Smith-Waterman score: 683; 49.074 identity in 216 aa overlap. DJ-1/PfpI family protein	Uncharacterized protein involved in an early stage of isoprenoid biosynthesis	
ECOLI03091	Aerobic respiration control sensor protein arcB	Sensory/regulatory protein rpfC	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Aerobic respiration control sensor protein arcB	Sensor protein	Sensor protein	Sensor protein	two-component hybrid sensor and regulator	Sensor protein	Aerobic respiration control sensor protein arcB	two-component sensor	Sensor protein	Sensor protein	Residues 1 to 778 of 778 are 100 pct identical to residues 1 to 778 of a 778 aa protein ARCB_ECOLI sp: P22763 aerobic respiration control sensor protein arcB	Sensor protein	Sensor protein	Sensor protein	Similar to two component sensor histidine kinase hypothetical protein	conserved gene sensory box histidine kinase/response regulator	Similar to two component sensor histidine kinase hypothetical protein	Sensor protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark RpfC	
ECOLI03092	Uncharacterized protein yhcC	Uncharacterized protein MJ0486	Radical SAM protein, TIGR01212 family	Uncharacterized Fe-S oxidoreductase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE2557	Putative uncharacterized protein	Putative uncharacterized protein	Predicted Fe-S oxidoreductase	Putative uncharacterized protein STY3508	Putative uncharacterized protein	Lmo1661 protein	Putative uncharacterized protein	Fe-S oxidoreductase	Putative uncharacterized protein	putative Fe-S oxidoreductase	Putative Fe-S oxidoreductase	Hypothetical protein yhcC	identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212 conserved hypothetical protein TIGR01212	Radical SAM protein, TIGR01212 family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	best DB hits: BLAST: ddbj:BAB07003.1; (AP001518) BH3284~unknown conserved protein; E=2e-51 pir:D69999; conserved hypothetical protein ytqA - Bacillus subtilis; E=3e-48 gb:AAK06364.1; AE006455_10 (AE006455) HYPOTHETICAL PROTEIN; E=1e-46 COG: BH3284; COG1242 Uncharacterized FeS oxidoreductases; E=2e-52 MJ1136; COG1243 ELP3 component of the RNA polymerase II complex,; E=2e-07 BS_hemN; COG0635 Coproporphyrinogen III oxidase and related FeS; E=2e-05 conserved hypothetical protein	Fe-S oxidoreductase	Putative uncharacterized protein AQ_632	Radical SAM protein, TIGR01212 family	
ECOLI03093	Glutamate synthase [NADPH] large chain	Glutamate synthase, alpha subunit	Ferredoxin-dependent glutamate synthase 2	Glutamate synthase, alpha subunit	Glutamate synthase large subunit	Ferredoxin-dependent glutamate synthase, Fd-GOGAT	Glutamate synthase large chain	NADPH-dependent glutamate synthase, large subunit	Glutamate synthase [NADPH] large chain	putative glutamate synthase, large subunit	Glutamate synthase [NADPH] large chain	Glutamate synthase, large subunit	Glutamate synthase, large subunit	Glutamate synthase [NADPH] large chain	Glutamate synthase, large subunit	GLUTAMATE SYNTHASE, LARGE SUBUNIT	ferredoxin-dependent glutamate synthase	Glutamate synthase, large subunit	Glutamate synthase, large subunit	Glutamate synthase, large subunit	Residues 6 to 1522 of 1522 are 99 pct identical to residues 1 to 1517 of a 1517 aa protein from Escherichia coli K12 ref: NP_417679.1 glutamate synthase, large subunit	Glutamate synthase [NADPH] large chain	Glutamate synthase [NADPH] large chain	identified by similarity to SP:Q05755; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898 glutamate synthase, large subunit	Glutamate synthase, alpha subunit	Ferredoxin-dependent glutamate synthase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark glutamate synthase, alpha subunit	IPR002489: Protein of unknown function DUF14; IPR002932: Ferredoxin-dependent glutamate synthase; IPR003009: FMN/related compound-binding core;IPR006981: Glutamate synthase amidotransferase domain;IPR006982: Glutamate synthase central domain glutamate synthase, large subunit	similar to Salmonella typhi CT18 glutamate synthase [NADPH] large chain precursor glutamate synthase [NADPH] large chain precursor	
ECOLI03094	Glutamate synthase [NADPH] small chain	Glutamate synthase, beta subunit	Glutamate synthase small chain	NADPH-dependent glutamate synthase, small subunit	Glutamate synthase (NADPH) small chain	putative glutamate synthase, small subunit	Glutamate synthase [NADPH] small chain	Glutamate synthase, small subunit	Glutamate synthase, small subunit	Glutamate synthase [NADPH] small chain	Glutamate synthase, small subunit	GLUTAMATE SYNTHASE SMALL CHAIN	Glutamate synthase, small subunit	Glutamate synthase, small subunit	Glutamate synthase, small subunit	Residues 1 to 472 of 472 are 99 pct identical to residues 1 to 472 of a 472 aa protein from Escherichia coli K12 ref: NP_417680.1 glutamate synthase, small subunit	Glutamate synthase [NADPH] small chain	Glutamate synthase [NADPH] small chain	Glutamate synthase, small subunit	IPR000103: Pyridine nucleotide-disulphide oxidoreductase, class-II; IPR000205: NAD-binding site; IPR000759: Adrenodoxin reductase;IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I;IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase;IPR006006: Glutamate synthase, NADH/NADPH, small subunit 2 glutamate synthase, small subunit	similar to Salmonella typhi CT18 glutamate synthase (NADPH) small chain glutamate synthase (NADPH) small chain	Glutamate synthase [NADPH] small chain. 	putative oxidoreductase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme glutamate synthase small chain	COG0493 glutamate synthase [NADPH] small chain precursor	Glutamate synthase, small subunit	Glutamate synthase, small subunit	Glutamate synthase, small subunit	glutamate synthase, beta subunit	
ECOLI03095	Protein gltF	Periplasmic protein	Putative Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit	Periplasmic protein	
ECOLI03096	Uncharacterized fimbrial chaperone yhcA	Putative fimbrial chaperone	Putative fimbrial chaperone	Putative fimbrial chaparone protein	Pili assembly chaperone precursor	putative fimbrial chaperone	Putative fimbrial chaperone	pili assembly chaperone PFAM: pili assembly chaperone KEGG: stm:STM4573 putative fimbrial chaparone	Fimbrial chaperone	pili assembly chaperone PFAM: pili assembly chaperone KEGG: bcn:Bcen_6325 pili assembly chaperone	Putative fimbrial chaperone	Fimbrial chaperone	Putative fimbrial chaperone	Pili assembly chaperone precursor	pili assembly chaperone PFAM: pili assembly chaperone KEGG: spe:Spro_2407 pili assembly chaperone	Predicted periplasmic chaperone protein	Putative gram-negative pili assembly chaperone	Putative uncharacterized protein	Putative periplasmic chaperone protein	Putative fimbrial chaperone	Pili assembly chaperone	Putative gram-negative pili assembly chaperone	putative fimbrial chaperone	Pili assembly chaperone	Fimbrial chaperone	Pili assembly chaperone	Pili assembly chaperone	Pili assembly chaperone	Putative fimbrial chaperone	
ECOLI03097	Uncharacterized outer membrane usher protein yhcD	Putative outer membrane fimbrial usher protein	Putative outer membrane fimbrial usher protein	Putative fimbrial usher protein	Fimbrial biogenesis outer membrane usher protein precursor	putative fimbrial usher protein identified by match to protein family HMM PF00577	Putative outer membrane fimbrial usher protein precursor	fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein KEGG: ecj:JW3183 predicted outer membrane protein	Outer membrane fimbrial usher protein precursor	fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein KEGG: bcn:Bcen_6324 fimbrial biogenesis outer membrane usher protein	Outer membrane fimbrial usher protein precursor	Fimbrial usher family protein	Fimbrial biogenesis outer membrane usher protein precursor	fimbrial biogenesis outer membrane usher protein PFAM: fimbrial biogenesis outer membrane usher protein KEGG: bam:Bamb_1679 fimbrial biogenesis outer membrane usher protein	Predicted outer membrane protein	Fimbrial usher protein	Putative uncharacterized protein	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial biogenesis outer membrane usher protein precursor	Fimbrial biogenesis outer membrane usher protein	Fimbrial usher protein	putative fimbrial usher protein	Fimbrial biogenesis outer membrane usher protein	pseudo	Fimbrial usher protein	Fimbrial usher protein	Fimbrial usher protein	Putative outer membrane fimbrial usher	Predicted outer membrane protein	
ECOLI03374	Putative uncharacterized protein yhiS	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	YhiS protein	Predicted protein	pseudo conserved predicted protein, N-terminal fragment	
ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	
ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	
ECOLI03098	Uncharacterized protein yhcF	Putative uncharacterized protein precursor	Predicted transcriptional regulator	Predicted transcriptional regulator	Putative exported protein	
ECOLI03099	Uncharacterized protein yhcG	Putative uncharacterized protein STY3512	Putative uncharacterized protein yhcG	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	COG4804 conserved hypothetical protein	Putative cytoplasmic protein	Code: S; COG: COG4804; orf conserved hypothetical protein	Putative uncharacterized protein	protein of unknown function DUF1016	protein of unknown function DUF1016	protein of unknown function DUF1016 PFAM: protein of unknown function DUF1016 KEGG: rme:Rmet_3044 protein of unknown function DUF1016	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo conserved hypothetical protein (fragment) Probable gene remnant. CDS is truncated at the N-terminus in comparison to similar proteins, for example: similar to Escherichia coli hypothetical protein YhcG UniProt:YHCG_ECOLI (EMBL:U00096) (375 aa) fasta scores: E()=2.8e-65, 62.463% id in 341 aa	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03100	Uncharacterized protein yhcH	Uncharacterized protein HI0227	Putative uncharacterized protein	Putative uncharacterized protein STY3515	conserved hypothetical protein	Hypothetical protein yhcH	Putative uncharacterized protein yhcH	Residues 1 to 154 of 154 are 98 pct identical to residues 1 to 154 of a 154 aa protein from Escherichia coli K12 ref: NP_417688.1 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR004375: Conserved hypothetical protein 22 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	best blastp match emb|CAC13833.1| (AL445565) predicted coding region [Mycoplasma pulmonis] conserved hypothetical protein	hypothetical cytosolic protein	Similar to: HI0227, YHCH_HAEIN conserved hypothetical protein	Uncharacterized BCR EbgC protein	Putative cytoplasmic protein	conserved hypothetical protein	Code: G; COG: COG2731 conserved hypothetical protein	Code: G; COG: COG2731 conserved hypothetical protein	hypothetical cytosolic protein	Code: G; COG: COG2731; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yhcH	Hypothetical protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: G; COG: COG2731	
ECOLI03101	N-acetylmannosamine kinase	Glucose kinase	Glucose kinase	N-acetylmannosamine kinase	Putative N-acetylmannosamine kinase	N-acetylmannosamine kinase	Alr1982 protein	Lmo0032 protein	hypothetical glucose kinase	Putative N-acetylmannosamine kinase 1	glucokinase	N-acetylmannosamine kinase	Putative sugar binding signalling protein	N-acetylmannosamine kinase	N-acetylmannosamine kinase	Residues 3 to 304 of 304 are 97 pct identical to residues 1 to 302 of a 302 aa protein from Escherichia coli K12 ref: NP_417689.1 putative NAGC-like transcriptional regulator	N-acetylmannosamine kinase	IPR000600: ROK family putative ManNAc kinase	similar to Salmonella typhi CT18 possible kinase possible kinase	N-acetylmannosamine kinase	N-acetylmannosamine kinase	ManNAc kinase; Similar to: HI0144, NANK_HAEIN putative N-acetylmannosamine kinase	N-acetylmannosamine kinase	identified by match to protein family HMM PF00480 ROK family protein	Code: KG; COG: COG1940 putative NAGC-like transcriptional regulator	Evidence 2b : Function of strongly homologous gene; PubMedId : 9864311, 15489439; Product type e : enzyme putative N-acetylglucosamine kinase with Actin-like ATPase domain/transcriptional regulator (NagC/XylR (ROK) family)	Code: KG; COG: COG1940 putative NAGC-like transcriptional regulator	ROK	ROK	
ECOLI03102	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	putative N-acetylmannosamine-6-phosphate 2-epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	hypothetical protein	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Putative epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Residues 15 to 243 of 243 are 99 pct identical to residues 1 to 229 of a 229 aa protein from Escherichia coli K12 ref: NP_417690.1 putative enzyme	Putative N-acetylmannosamine-6-phosphate 2- epimerase	hypothetical protein	IPR003009: FMN/related compound-binding core; IPR007260: Putative N-acetylmannosamine-6-phosphate epimerase putative ManNAc-6P epimerase	similar to Salmonella typhimurium putative ManNAc-6P epimerase putative ManNAc-6P epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase	Proteins binding FMN and related compounds core region	N-acetylmannosamine-6-phosphate 2-epimerase	ManNAc-6-P epimerase; Similar to: HI0145, NANE_HAEIN putative N-acetylmannosamine-6-phosphate 2-epimerase	Putative N-acetylmannosamine-6-phosphate 2- epimerase 2	possible N-acetylmannosamine-6-P epimerase	Code: G; COG: COG3010 putative enzyme	Evidence 2b : Function of strongly homologous gene; PubMedId : 9864311; Product type e : enzyme putative N-acetylmannosamine-6P epimerase, NAD(P)-linked, with ribulose-phoshate binding barrel	Code: G; COG: COG3010 putative enzyme	N-acylglucosamine-6-phosphate 2-epimerase	
ECOLI03103	Putative sialic acid transporter	conserved hypothetical protein;	Lactate transporter, required for uptake of lactate and pyruvate; phosphorylated; expression is derepressed by transcriptional activator Cat8p during respiratory growth, and repressed in the presence of glucose, fructose, and mannose. [Source:SGD;Acc:S000001700]	DEHA2D18920p;similar to uniprot|P36035 Saccharomyces cerevisiae YKL217W JEN1 Lactate transporter required for uptake of lactate and pyruvate;	Putative sialic acid transporter	Putative sialic acid transporter 1	Putative sialic acid transporter	Residues 1 to 506 of 506 are 99 pct identical to residues 1 to 506 of a 506 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289792.1 sialic acid transporter	Putative sialic acid transporter	IPR004742: Sialic acid transporter; IPR005828: General substrate transporter; IPR007114: Major facilitator superfamily MFS family, sialic acid transport protein	similar to Salmonella typhi CT18 putative sialic acid transporter putative sialic acid transporter	Putative sialic acid transporter	Putative sialic acid transporter	Code: GEPR; COG: COG0477 sialic acid transporter	Code: GEPR; COG: COG0477 sialic acid transporter	transcript_id=ENSOCUT00000002544	Code: GEPR; COG: COG0477 sialic acid transporter	putative transmembrane transporter similarity:blastp; with=UniProt:MMLH_ALCEU (EMBL:AEMML); Alcaligenes eutrophus (Ralstonia eutropha).; mmlH; Probable 4-methylmuconolactone transporter.; length=428; E()=5e-37; similarity:blastp; with=UniProt:Q63TT6_BURPS (EMBL:BX571965); Burkholderia pseudomallei (Pseudomonas pseudomallei).; Putative metabolite transport, membrane protein.; length=406; E()=0e-123;	Putative sialic acid transporter	Putative sugar transporter	Sialic acid transporter	transcript_id=ENSSTOT00000010147	transcript_id=ENSTBET00000013273	Sugar transporter	Major facilitator superfamily (MFS) metabolite/H+ symporter	Putative sugar transporter	sialic acid transporter Code: GEPR; COG: COG0477	putative muconolactone transporter similar to Ralstonia eutropha gi:07387890; TC 2.A.1; major facilitator superfamily	Sugar transporter	
ECOLI03104	N-acetylneuraminate lyase	N-acetylneuraminate lyase	N-acetylneuraminate lyase	N-acetylneuraminate lyase	N-acetylneuraminate lyase	Putative N-acetylneuraminate lyase	N-acetylneuraminate lyase	putative N-acetylneuraminate lyase	N-acetylneuraminate lyase 1	Product confidence : putative Gene name confidence : hypothetical putative N-acetylneuraminate lyase subunit protein	Putative acylneuraminate lyase	N-acetylneuraminate lyase	Dihydrodipicolinate synthase/N-acetylneuraminate lyase	Residues 1 to 297 of 297 are 100 pct identical to residues 1 to 297 of a 297 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289793.1 N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12?	N-acetylneuraminate lyase	N-acetylneuraminate lyase	N-acetylneuraminate lyase	N-acetylneuraminate lyase	IPR002220: Dihydrodipicolinate synthetase; IPR005264: N-acetylneuraminate lyase N-acetylneuraminate lyase (aldolase)	similar to Salmonella typhi CT18 N-acetylneuraminate lyase N-acetylneuraminate lyase	Putative uncharacterized protein gbs0038	N-acetylneuraminate lyase subunit	identified by match to PFAM protein family HMM PF00701 N-acetylneuraminate lyase, putative	Ortholog of S. aureus MRSA252 (BX571856) SAR0312 putative N-acetylneuraminate lyase	N-acetylneuraminate lyase subunit	N-acetylneuraminate lyase	best blastp match gb|AAK33332.1| (AE006492) putative acylneuraminate lyase [Streptococcus pyogenes M1 GAS] putative acylneuraminate lyase	N-acetylneuraminate lyase	N-acetylneuraminic acid aldolase; N-acetylneuraminate pyruvate-lyase; sialic acid lyase; sialate lyase; sialic acid aldolase; Similar to: HI0142, NANA_HAEIN N-acetylneuraminate lyase	
ECOLI03105	Transcriptional regulator nanR	Transcriptional regulator nanR	similar to GP:14524042; identified by sequence similarity; putative transcriptional regulator, GntR family	Product confidence : putative Gene name confidence : hypothetical putative transcriptional regulator protein	TRANSCRIPTIONAL REGULATOR, GNTR FAMILY	Transcriptional regulator nanR	Residues 1 to 263 of 263 are 100 pct identical to residues 1 to 263 of a 263 aa protein from Escherichia coli K12 ref: NP_417693.1 putative FADA-type transcriptional regulator	identified by match to protein family HMM PF00392 transcriptional regulator, GntR family	IPR000524: Bacterial regulatory protein, GntR family putative regulatory protein, gntR family	similar to Salmonella typhi CT18 putative GntR-family transcriptional regulator putative GntR-family transcriptional regulator	similar to BRA0459, transcriptional regulator, GntR family transcriptional regulator, GntR family	Transcriptional regulator nanR	identified by match to protein family HMM PF00392; match to protein family HMM PF07729 transcriptional regulator, GntR family	regulatory protein, GntR:Bacterial regulatory protein, GntR	Code: K; COG: COG2186 putative FADA-type transcriptional regulator	Bacterial regulatory protein, GntR family	Evidence 2b : Function of strongly homologous gene; PubMedId : 9864311; Product type r : regulator transcriptional repressor of aminosugar metabolism (GntR family)	Code: K; COG: COG2186 putative FADA-type transcriptional regulator	GntR-like	Code: K; COG: COG2186 putative FADA-type transcriptional regulator	Transcriptional regulator nanR	Regulatory protein GntR, HTH precursor	regulatory protein GntR, HTH	Transcriptional regulator nanR	regulatory protein GntR, HTH identified by match to protein family HMM PF00392; match to protein family HMM PF07729	transcriptional regulator, GntR family, putative	transcriptional regulatory protein (FadR family) cytoplasmic protein involved in transcriptional mechanism.	Putative transcription regulator protein	putative FADA-type transcriptional regulator Code: K; COG: COG2186	
ECOLI03106	Putative cryptic C4-dicarboxylate transporter dcuD	pseudo	C4-dicarboxylate transporter	Putative transport protein	C4-dicarboxylate transporter	Residues 1 to 455 of 455 are 98 pct identical to residues 1 to 455 of a 455 aa protein from Escherichia coli K12 ref: NP_417694.1 putative transport protein	anaerobic C4-dicarboxylate transporter	Code: C; COG: COG3069 putative transport protein	transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family identified by similarity to SP:P45428; match to protein family HMM PF03606; match to protein family HMM PF06808; match to protein family HMM TIGR00771	cryptic C4-dicarboxylate transporter DcuD, authentic frameshift identified by match to protein family HMM PF03606; match to protein family HMM TIGR00771	putative transport protein Code: C; COG: COG3069	Putative uncharacterized protein	Transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family	Putative cryptic C4-dicarboxylate transporter DcuD	Predicted transporter	Anaerobic c4-dicarboxylate antiporter, DcuC family	Putative anaerobic C4-dicarboxylate transporter DcuD	Putative uncharacterized protein	C4-dicarboxylate transporter	Putative cryptic C4-dicarboxylate transporter DcuD	Putative transport protein	Putative transporter	Putative transporter	Putative transporter	Anaerobic C4-dicarboxylate transporter, putative	Transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family	Putative transporter	DcuD protein	Predicted transporter	
ECOLI03107	Stringent starvation protein B	Stringent starvation protein B	SspB	Stringent starvation protein B	Stringent starvation protein B	Stringent starvation protein B	putative stringent starvation protein B	Stringent starvation protein B	Stringent starvation protein B	Stringent starvation protein B	Stringent starvation protein B	Stringent starvation protein b	Stringent starvation protein B	Stringent starvation protein B	Stringent starvation protein B	Stringent starvation protein B	Stringent starvation protein B	Stringent starvation protein B	Residues 1 to 165 of 165 are 99 pct identical to residues 1 to 165 of a 165 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289796.1 stringent starvation protein B	Putative stringent starvation protein B	Putative stringent starvation protein B	Putative stringent starvation protein b	Stringent starvation protein B	Stringent starvation protein B	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark stringent starvation protein B	IPR007481: Stringent starvation protein B stringent starvation protein B	similar to Salmonella typhi CT18 stringent starvation protein B stringent starvation protein B	Putative stringent starvation protein B	Putative regulator of pilE expression	
ECOLI03108	Stringent starvation protein A	Stringent starvation protein A	Stringent starvation protein A	Stringent starvation protein A homolog	Stringent starvation protein A	Stringent starvation protein A homolog	Stringent starvation protein A	Stringent starvation protein A	Stringent starvation protein A	Putative stringent starvation protein A	putative stringent starvation protein A	Stringent starvation protein A	Stringent starvation protein A	Stringent starvation protein A	Stringent starvation protein A	Stringent starvation protein a	Stringent starvation protein a	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN	Stringent starvation protein A	Stringent starvation protein A	glutathione S-transferase	Stringent starvation protein A	Stringent starvation protein A	Stringent starvation protein A	glutathione transferase	Stringent starvation protein A homolog	Stringent starvation protein A	Residues 1 to 212 of 212 are 100 pct identical to residues 1 to 212 of a 212 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289797.1 regulator of transcription; stringent starvation protein A	Putative stringent starvation protein A	
ECOLI03109	30S ribosomal protein S9	40S ribosomal protein S16;	Protein component of the small (40S) ribosomal subunit; identical to Rps16Ap and has similarity to E. coli S9 and rat S16 ribosomal proteins.  [Source:SGD;Acc:S000002241]	30S ribosomal protein S9	40S ribosomal protein S9, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC29A4.03c]	highly similar to sp|P40213 Saccharomyces cerevisiae YMR143w RPS16A ribosomal protein S16.e P2.196. f2.1 or YDL083c RPS16B, start by similarity	30S ribosomal protein S9	30S ribosomal protein S9P	30S ribosomal protein S9	30S ribosomal protein S9P	30S ribosomal protein S9	30S ribosomal protein S9P	30S ribosomal protein S9	30S ribosomal protein S9	30S ribosomal protein S9P	30S ribosomal protein S9	30S ribosomal protein S9	30S ribosomal protein S9	highly similar to uniprot|P40213 Saccharomyces cerevisiae YMR143w RPS16A or uniprot|P40213 Saccharomyces cerevisiae YDL083c RPS16B;	DEHA2D08558p;highly similar to uniprot|P40213 Saccharomyces cerevisiae YMR143W RPS16A Protein component of the small (40S) ribosomal subunit or uniprot|P40213 Saccharomyces cerevisiae YDL083C RPS16B Protein component of the small (40S) ribosomal subunit,;	30S ribosomal protein S9P	30S ribosomal protein S9P	identified by match to PFAM protein family HMM PF00380 ribosomal protein S9	30S ribosomal protein S9	30S ribosomal protein S9	30S ribosomal protein S9	30S ribosomal protein S9	30S ribosomal protein S9	30S ribosomal protein S9	
ECOLI03110	50S ribosomal protein L13	60S ribosomal protein L23, mitochondrial precursor;	Mitochondrial ribosomal protein of the large subunit. [Source:SGD;Acc:S000005676]	similar to sp|Q12487 Saccharomyces cerevisiae YOR150w MRPL23 ribosomal protein of the large subunit, mitochondrial, hypothetical start	50S ribosomal protein L13	gi|4929425|gb|AAD33988.1|AF147722_1 Kluyveromyces lactis ribosomal protein L23, start by similarity	50S ribosomal protein L13	50S ribosomal protein L13P	50S ribosomal protein L13P	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13P	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	highly similar to uniprot|Q12487 Saccharomyces cerevisiae YOR150w MRPL23;	DEHA2G07524p;similar to uniprot|Q12487 Saccharomyces cerevisiae YOR150W MRPL23 Mitochondrial ribosomal protein of the large subunit;	50S ribosomal protein L13P	similar to GB:J04183, SP:P13473, PID:2340103, PID:307110,  and PID:704463; identified by sequence similarity; putative ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	50S ribosomal protein L13	
ECOLI03111	Uncharacterized protein yhcM	protein AFG1;	Conserved protein that may act as a chaperone in the degradation of misfolded or unassembled cytochrome c oxidase subunits; localized to matrix face of the mitochondrial inner membrane; member of the AAA family but lacks a protease domain. [Source:SGD;Acc:S000000778]	similar to sp|P32317 Saccharomyces cerevisiae YEL052w AFG1 ATPase family gene, start by similarity	Bll0457 protein	Uncharacterized protein C115.02c [Source:GeneDB_Spombe;Acc:SPBC115.02c]	similar to sp|P32317 Saccharomyces cerevisiae YEL052w AFG1 ATPase family gene singleton, hypothetical start	ATPase	ATPase	highly similar to uniprot|P32317 Saccharomyces cerevisiae YEL052w AFG1;	DEHA2E08998p;similar to uniprot|P32317 Saccharomyces cerevisiae YEL052W AFG1 Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family and highly similar to CA3775|CaAFG1 Candida albicans CaAFG1 ATPase family gene;	Putative ATP/GTP-binding protein	Putative uncharacterized protein	Putative ATPase n2B	Putative uncharacterized protein	Predicted ATPase	Putative uncharacterized protein	Putative ATP/GTP-binding protein	Putative uncharacterized protein	hypothetical ATPase	Hypothetical protein yhcM	Putative uncharacterized protein	Probable ATPase	Putative uncharacterized protein	Putative uncharacterized protein	go_component: mitochondrion [goid 0005739]; go_function: ATPase activity [goid 0016887] hypothetical protein	Putative uncharacterized protein	Putative ATP/GTP-binding protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	
ECOLI03112	Putative cytochrome d ubiquinol oxidase subunit 3	Putative uncharacterized protein	Putative uncharacterized protein VV0592	Putative uncharacterized protein STY3527	hypothetical protein	Putative cytochrome d ubiquinol oxidase subunit III	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein VP0434	Putative cytochrome d ubiquinol oxidase subunit 3	Putative uncharacterized protein	Residues 1 to 134 of 134 are 99 pct identical to residues 1 to 134 of a 134 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289801.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to unknown protein YhcB of Escherichia coli	Periplasmic membrane protein associated with membrane transport	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative membrane protein	outer membrane protein	Similar to: HI1628, YHCB_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Putative periplasmic protein	conserved hypothetical protein	ortholog to Escherichia coli bnum: b3233 conserved hypothetical protein	Code: S; COG: COG3105 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3105 conserved hypothetical protein	conserved hypothetical protein	protein of unknown function DUF1043	
ECOLI03113	Protease degQ	Probable periplasmic serine protease do/hhoA-like	Putative serine protease	Possible serine protease	Probable serine proteinase Do	Periplasmic serine protease Do, putative	Probable serine protease	Serine protease	Probable serine protease do-like	Serine protease MucD	Protease degQ	Serine protease	Serine protease, HtrA/DegQ/DegS family	Serine protease, HtrA/DegQ/DegS family	Exported protease	Serine proteinase	PMID: 3057437 PMID: 10761919 best DB hits: BLAST: pir:B81914; probable periplasmic serine proteinase (EC 3.4.21.-); E=2e-47 gb:AAK01318.1; (AF190580) MucD [Pseudomonas syringae pv.; E=8e-47 pir:F83550; serine proteinase MucD precursor PA0766 [imported] -; E=1e-46 COG: NMB0532; COG0265 Trypsin-like serine proteases, typically; E=6e-48 RP124; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=7e-45 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=3e-44 PFAM: PF00089; Trypsin; E=1.9e-16 PF00595; PDZ domain (Also known as DHR or GL; E=3.1e-09 probable periplasmic serine proteinase	Putative protease	Serine endoprotease	Putative serine proteinase	serine protease, HtrA/DegQ/DegS family	Endopeptidase	HtrA-like serine protease	Residues 15 to 382 of 399 are 99 pct identical to residues 1 to 368 of a 455 aa protein from Escherichia coli K12 ref: NP_417701.1 serine endoprotease	Protease	DegQ protein	Probable htra-like serine protease signal peptide protein	Protease DegQ	identified by similarity to OMNI:NTL01LL2179; match to protein family HMM PF00089; match to protein family HMM PF00595 serine protease HtrA, putative	
ECOLI03114	Protease degS	Protease degS	Serine protease HtrA	Serine protease DO	AlgW protein	Periplasmic serine protease, HtrA/DegQ/DegS family	Serine protease DO	Serine protease	Serine protease	Lmo0292 protein	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain	Protease Do	putative DegS serine protease	Protease degS	Protease DegS	Protease	Protease DegS	Exported protease	HtrA family serine protease	Trypsin domain protein	serine protease Do	Protease DegS	Protease degS	similar to AX065711-1|CAC26095.1| percent identity: 69 in 446 aa putative serine protease, heat shock protein	Serine protease	Protease DegS	Periplasmic trypsin-like serine protease	Residues 1 to 355 of 355 are 99 pct identical to residues 1 to 355 of a 355 aa protein from Escherichia coli O157:H7 ref: NP_312135.1 protease	Protease	
ECOLI03115	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC306.08c]	similar to sp|P32419 Saccharomyces cerevisiae YDL078c MDH3 malate dehydrogenase, peroxisomal, start by similarity	Malate dehydrogenase	Malate dehydrogenase	L-lactate dehydrogenase	Malate dehydrogenase	DEHA2B02596p;similar to uniprot|P17505 Saccharomyces cerevisiae YKL085w MDH1 mitochondrial malate dehydrogenase;	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	L-lactate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	Malate dehydrogenase	putative malate dehydrogenase	L-lactate dehydrogenase	Malate dehydrogenase	identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01763 malate dehydrogenase	
ECOLI03116	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	putative arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	Arginine repressor	CDS_ID OB1875 arginine repressor	similar to Z49111-5|CAB82483.1| percent identity: 47 in 167 aa arginine repressor	Arginine repressor	Arginine repressor	SCL24.12c, argR, arginine repressor, len: 179 aa; identical to previously sequenced SW:ARGR_STRCL (EMBL:Y11134) Streptomyces clavuligerus arginine repressor ArgR, 160 aa. Contains Pfam match to entry PF01316 Arg_repressor, Arginine repressor arginine repressor	Arginine repressor	Residues 1 to 156 of 156 are 100 pct identical to residues 1 to 156 of a 156 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289805.1 repressor of arg regulon; cer-mediated site specific recombination	Arginine repressor	
ECOLI03117	UPF0379 protein yhcN	UPF0379 protein yhcN precursor	Putative uncharacterized protein yhcN	Residues 1 to 104 of 104 are 99 pct identical to residues 1 to 104 of a 104 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289806.1 orf, conserved hypothetical protein	Putative exported protein	putative outer membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative exported protein	Putative outer membrane protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yhcN	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Protein YcfR	Putative uncharacterized protein precursor	Conserved protein	Putative uncharacterized protein	Protein YcfR	Putative uncharacterized protein precursor	
ECOLI03118	Uncharacterized protein yhcO	Hypothetical protein yhcO	Uncharacterized protein yhcO	Residues 1 to 90 of 90 are 98 pct identical to residues 1 to 90 of a 90 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289807.1 orf, conserved hypothetical protein	Putative ribonuclease inhibitor	Similar to ribonuclease inhibitor	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative ribonuclease inhibitor	Putative cytoplasmic protein	Code: K; COG: COG2732 conserved hypothetical protein	Code: K; COG: COG2732 conserved hypothetical protein	Code: K; COG: COG2732; orf conserved hypothetical protein	Putative uncharacterized protein	Putative ribonuclease inhibitor	Putative uncharacterized protein yhcO	Ribonuclease inhibitor	Putative ribonuclease inhibitor	conserved hypothetical protein Code: K; COG: COG2732	Ribonuclease inhibitor	putative barnase inhibitor	Putative uncharacterized protein	Putative uncharacterized protein yhcO	Putative uncharacterized protein	Putative uncharacterized protein	Barstar	Predicted barnase inhibitor	Barstar	Putative uncharacterized protein	
ECOLI03119	p-hydroxybenzoic acid efflux pump subunit aaeB	p-hydroxybenzoic acid efflux pump subunit aaeB	Putative membrane protein	p-hydroxybenzoic acid efflux pump subunit aaeB	pseudo	p-hydroxybenzoic acid efflux pump subunit aaeB	Residues 1 to 655 of 655 are 99 pct identical to residues 1 to 655 of a 655 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289808.1 orf, conserved hypothetical protein	p-hydroxybenzoic acid efflux pump subunit aaeB	IPR006726: Fusaric acid resistance protein conserved region putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	p-hydroxybenzoic acid efflux pump subunit aaeB	Membrane protein, putative	p-hydroxybenzoic acid efflux pump subunit aaeB	Code: S; COG: COG1289 conserved hypothetical protein	Code: S; COG: COG1289 conserved hypothetical protein	Code: S; COG: COG1289; orf conserved hypothetical protein	p-hydroxybenzoic acid efflux pump subunit aaeB	Efflux transporter, permease protein	Putative membrane protein precursor	p-hydroxybenzoic acid efflux pump subunit aaeB	Membrane protein precursor	Putative membrane protein precursor	conserved hypothetical protein Code: S; COG: COG1289	Membrane protein precursor	conserved hypothetical protein	Fusaric acid resistance protein conserved region	Fusaric acid resistance protein conserved region	Fusaric acid resistance protein conserved region precursor	Fusaric acid resistance protein conserved region	
ECOLI03120	p-hydroxybenzoic acid efflux pump subunit aaeA	p-hydroxybenzoic acid efflux pump subunit aaeA	p-hydroxybenzoic acid efflux pump subunit aaeA	p-hydroxybenzoic acid efflux pump subunit aaeA	p-hydroxybenzoic acid efflux pump subunit aaeA	Possible FusE-MFP/HlyD family membrane fusion protein	Residues 1 to 310 of 310 are 99 pct identical to residues 1 to 310 of a 310 aa protein from Escherichia coli K12 ref: NP_417708.1 putative membrane protein	p-hydroxybenzoic acid efflux pump subunit aaeA	Probable fusaric acid resistance protein FusE II	Multidrug-efflux system secretion protein	IPR006143: Secretion protein HlyD putative membrane located multidrug resistance protein	similar to Salmonella typhi CT18 possible exported protein possible exported protein	Fusaric acid resistance protein	p-hydroxybenzoic acid efflux pump subunit aaeA	Membrane fusion protein, putative	p-hydroxybenzoic acid efflux pump subunit aaeA	Code: V; COG: COG1566 putative membrane protein	multidrug resistance protein	Code: V; COG: COG1566 putative membrane protein	p-hydroxybenzoic acid efflux pump subunit aaeA	Putative HlyD family secretion protein precursor	secretion protein HlyD	p-hydroxybenzoic acid efflux pump subunit aaeA	HlyD family secretion protein precursor	efflux transporter, RND family, MFP subunit TIGRFAM: efflux transporter, RND family, MFP subunit PFAM: secretion protein HlyD family protein KEGG: bur:Bcep18194_C7724 secretion protein HlyD family	Aromatic acid efflux pump, membrane fusion protein	possible FusE-MFP/HlyD family membrane fusion protein identified by match to protein family HMM PF00529	Putative HlyD family secretion protein precursor	putative efflux transporter, membrane fusion protein Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	
ECOLI03121	Protein aaeX	Protein aaeX	Putative membrane protein	Protein aaeX	Putative membrane protein	Protein aaeX	Protein aaeX	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Protein aaeX	Protein aaeX	conserved hypothetical protein	conserved hypothetical protein	putative component of multidrug efflux system	orf conserved hypothetical protein	Protein aaeX	Putative membrane protein	protein of unknown function DUF1656	Protein aaeX	Membrane protein	Putative membrane protein	conserved hypothetical protein	Membrane protein	conserved hypothetical protein	Protein aaeX	Putative uncharacterized protein yhcR	Putative uncharacterized protein	Protein AaeX	Protein aaeX	
ECOLI03122	HTH-type transcriptional activator aaeR	HTH-type transcriptional activator aaeR	Putative temperature-dependent LysR-family regulator A	HTH-type transcriptional activator aaeR	Residues 1 to 309 of 309 are 99 pct identical to residues 1 to 309 of a 309 aa protein from Escherichia coli O157:H7 ref: NP_312143.1 putative transcriptional regulator LYSR-type	Probable lysR-family transcriptional regulatory protein	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 probable LysR-family transcriptional regulator probable LysR-family transcriptional regulator	Probable lysR-family transcriptional regulatory protein	Putative LysR family transcriptional regulator	quorum sensing Escherichia coli regulator A; Code: K; COG: COG0583 QseA	putative transcriptional regulator	similar to quorum sensing Escherichia coli regulator A; Code: K; COG: COG0583 quorum sensing regulator A	Hypothetical transcriptional regulator YhcS	LysR-family transcriptional regulatory protein	Putative transcriptional regulator LYSR-type	LysR-family transcriptional regulatory protein	Probable lysR-family transcriptional regulatory protein	quorum sensing Escherichia coli regulator A Code: K; COG: COG0583	LysR-family transcriptional regulatory protein	putative DNA-binding transcriptional regulator, efflux system	Transcriptional regulator, LysR family	Putative transcriptional regulator	Putative uncharacterized protein	Transcriptional activator AaeR	Transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator, efflux system	Transcriptional activator AaeR	Transcriptional activator AaeR	
ECOLI03123	Protein tldD	Uncharacterized protein MJ0996	TldD protein	TldD protein	Uncharacterized protein slr1322	TldD protein	Uncharacterized protein AF_0655	Protein tldD homolog	Uncharacterized protein MTH_856	504aa long hypothetical tldd protein	Maturation protease	Putative modulator of DNA gyrase	TldD protein	Putative modulator of DNA gyrase; TldD	TldD-like modulator of DNA gyrase, tldD protein homolog	TLDD protein homolog	Putative modulator of DNA gyrase; TldD	TldD protein	TldD protein	TldD	Putative uncharacterized protein	Predicted Zn-dependent protease	TldD	TldD protein	TldD protein	Putative DNA gyrase control protein	TldD protein	putative TldD, Zn-dependent proteases and theirinactivated homologs	Protein tldD	
ECOLI03124	Uncharacterized protein yhdP	Putative uncharacterized protein	Putative uncharacterized protein	Predicted membrane protein	Possible exported protein	Putative membrane protein	hypothetical membrane protein	Hypothetical protein yhdP	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2686	Putative uncharacterized protein	Putative uncharacterized protein	Predicted membrane protein	Residues 1 to 1266 of 1266 are 99 pct identical to residues 1 to 1266 of a 1266 aa protein from Escherichia coli K12 ref: NP_417712.1 Uncharacterized membrane protein	Putative exported protein	Possible transmembrane protein	Probable transmembrane protein	Similar to unknown protein YhdP of Escherichia coli	similar to unknown protein hypothetical protein	conserved gene transmembrane protein	similar to unknown protein hypothetical protein	Probable transmembrane protein	
ECOLI03125	Ribonuclease G	Ribonuclease G	Ribonuclease G	Ribonuclease G	Ribonuclease G	similar to SP:P44443; identified by sequence similarity; putative ribonuclease G	Ribonuclease G	Ribonuclease G	Cytoplasmic axial filament protein	Ribonuclease G	Cytoplasmic axial filament protein	CafA	Cytoplasmic axial filament protein	Cytoplasmic axial filament protein, putative	Ribonuclease G and E	Ribonuclease G	Ribonuclease, Rne/Rng family	Related to cytoplasmic axial filament protein	Lmo1543 protein	Ribonuclease G	Ribonuclease G	Ribonuclease, Rne/Rng family	Ribonuclease G	putative ribonucleases G and E	Cytosolic axial filament protein cafA and ribonuclease E	Ribonuclease G	Ribonuclease G	identified by match to protein family HMM TIGR00757 ribonuclease, Rne/Rng family	Ribonuclease G	
ECOLI03126	Maf-like protein yhdE	similar to sp|O14141 Schizosaccharomyces pombe Hypothetical protein C3G6.03c in chromosome I, hypothetical start	Maf-like protein blr1259	Maf-like protein C3G6.03c [Source:GeneDB_Spombe;Acc:SPAC3G6.03c]	similar to sp|Q99210 Saccharomyces cerevisiae YOR111w singleton, start by similarity	Maf-like protein FN0759	Maf-like protein MM_1910	Maf-like protein GSU2545	Maf-like protein PD_0415	Maf-like protein MA_0748	Maf-like protein XCC2610	DEHA2A05698p;similar to uniprot|Q99210 Saccharomyces cerevisiae YOR111W;	Maf-like protein PH1941	similar to GB:M94539, SP:Q01064,  and PID:179891; identified by sequence similarity; putative maf protein	Maf-like protein BT_1676	Maf-like protein CT0974	Maf-like protein aq_1718	Maf-like protein SYNW1702	Maf-like protein PYRAB17160	Maf-like protein PF0216	Maf-like protein PMM1159	Maf-like protein CPE2145	Maf-like protein EF_3165	Maf-like protein CC_2342	Maf-like protein RC1266	Maf-like protein NMB0598	Maf-like protein PM1268	Maf-like protein PA4478	Maf-like protein Cj0507	
ECOLI03127	Rod shape-determining protein mreD	Rod shape-determining protein	Rod shape-determining protein mreD	MreD	Rod shape-determining protein MreD	Cell shape-determining protein	Rod shape-determining protein	Putative rod shape-determining protein	hypothetical rod shape-determining protein MreD	Rod shape-determining protein mreD	Rod shape-determining protein MreD	Rod shape-determining protein	Rod shape-determining protein MreD	Rod shape-determining protein	Rod shape-determining protein MreD	Rod shape-determining protein MreD	Rod shape-determining protein MreD	Rod shape-determining protein mreD	Rod shape-determining protein	Cell shape-determining protein	Residues 1 to 162 of 162 are 98 pct identical to residues 1 to 162 of a 162 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289816.1 rod shape-determining protein	Rod shape-determining protein MreD	Possible rod shape-determining MreD transmembrane protein	MreD protein	Probable rod shape-determining mred transmembrane protein	Rod shape-determining protein MreD	Rod shape-determining protein MreD	conserved gene rod shape determining protein MreD	Rod shape-determining protein MreD	
ECOLI03128	Rod shape-determining protein mreC	Rod shape-determining protein	Rod shape-determining protein mreC	Cell-shape determining protein	Rod shape-determining protein MreC	Rod shape-determining protein MreC	MreC	Rod shape-determining protein MreC	Cell shape-determining protein	Rod shape-determining protein mreC	Rod shape-determining protein	Rod shape-determining protein MreC	MreC protein	Rod shape-determining protein mreC	Rod shape-determining protein	Putative rod shape-determining protein	putative rod shape-determining protein MreC	Rod shape-determining protein	Rod shape-determining protein MreC	Rod shape-determining protein mreC	Rod shape-determining protein MreC	identified by match to protein family HMM PF04085; match to protein family HMM TIGR00219 rod shape-determining protein MreC	Rod shape-determining protein MreC	Rod shape-determining protein	Rod shape-determining protein	Rod shape-determining protein MreC	Rod shape-determining protein	Rod shape-determining protein MreC	Rod shape-determining protein	
ECOLI03129	Rod shape-determining protein mreB	Rod shape-determining protein MreB	Rod shape-determining protein	Rod shape-determining protein	Rod shape-determining protein mreB	Rod shape-determining protein	HSP70 class molecular chaperones involved in cell morphogenesis	identified by match to PFAM protein family HMM PF02491 cell shape-determining protein MreB	Rod shape-determining protein MreB	Rod shape-determining protein MreB	Putative rod shape-determining protein	Rod shape determining protein MreB	Rod shape determining protein	Rod shape determining protein	Rod shape-determining protein	Rod shape-determining protein MreB	Rod shape-determining protein mreB	Rod shape-determining protein mreB	Rod shape-determining protein MreB	Homolog of E. coli rod shape-determining protein	Rod shape-determining protein MreB	Rod shape-determining protein MreB	Rod shape-determining protein mreB	Rod shape-determining protein mreB	Rod shape-determining protein mreB	Rod shape-determining protein	Rod shape-determining protein MreB	Probable rod shape-determining protein	MreB protein	
ECOLI03130	Uncharacterized protein yhdA	MSHA biogenesis protein MshH	Putative lipoprotein	putative MSHA biogenesis protein MshH	Hypothetical protein yhdA	MSHA biogenesis protein MshH	MSHA biogenesis protein MshH	Putative signaling membrane protein	MSHA biogenesis protein MshH	Putative uncharacterized protein yhdA	EAL domain protein	Residues 1 to 646 of 646 are 99 pct identical to residues 1 to 646 of a 646 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289819.1 orf, conserved hypothetical protein	Putative exported protein	IPR000160: GGDEF; IPR001633: EAL domain putative diguanylate cyclase	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative uncharacterized protein	Putative exported protein	diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)	Putative diguanylate cyclase	conserved hypothetical protein	Code: T; COG: COG2200 conserved hypothetical protein	Two component signal transduction response regulator	Code: T; COG: COG2200 conserved hypothetical protein	conserved hypothetical protein	Code: T; COG: COG2200; orf conserved hypothetical protein	putative sensor protein	Putative uncharacterized protein	diguanylate cyclase/phosphodiesterase	EAL domain protein precursor	
ECOLI03131	Putative quinone oxidoreductase yhdH	Alcohol dehydrogenase, zinc-containing	Probable oxidoreductase	Zn-binding alcohol dehydrogenase	Possible oxidoreductase	Putative quinone oxidoreductase, YhdH/YhfP family	NADPH:quinone reductase and related Zn-dependent oxidoreductases	Alcohol dehydrogenase	Putative zinc-binding alcohol dehydrogenase	Protein yhdH	identified by match to protein family HMM PF00107 alcohol dehydrogenase, zinc-containing	Zinc-binding alcohol dehydrogenase	Zinc-binding dehydrogenase	Putative zinc-binding oxidoreductase	best DB hits: BLAST: swissprot:P26646; YHDH_ECOLI PROTEIN YHDH ----- pir: JS0688; E=4e-86 gb:AAG58380.1; AE005553_2 (AE005553) putative dehydrogenase; E=5e-86 pir:D82374; zinc-binding alcohol dehydrogenase VC0026 [imported] -; E=1e-76 COG: yhdH; COG0604 NADPH:quinone reductase and related Zn-dependent; E=4e-87 BH0538; COG1064 Zn-dependent alcohol dehydrogenases; E=0.001 PA0863; COG0604 NADPH:quinone reductase and related Zn-dependent; E=0.003 PFAM: PF00107; Zinc-binding dehydrogenases; E=2.3e-38 putative zinc-binding alcohol dehydrogenase	Zinc-binding dehydrogenase	hypothetical conserved protein	Zinc-binding alcohol dehydrogenase	Putative zinc-binding dehydrogenase	Putative dehydrogenase	similar to M80458-1|AAA23407.1| percent identity: 45 in 321 aa putative alcohol dehydrogenase	Putative dehydrogenase	Alcohol dehydrogenase	Zn-binding alcohol dehydrogenase	Residues 1 to 324 of 324 are 99 pct identical to residues 1 to 324 of a 324 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289820.1 putative dehydrogenase	Probable zinc-binding dehydrogenase	Similar to putative dehydrogenase YhdH of Escherichia coli	identified by match to protein family HMM PF00107 oxidoreductase, zinc-binding dehydrogenase family	IPR000566: Lipocalin-related protein and Bos/Can/Equ allergen; IPR001092: Basic helix-loop-helix dimerization domain bHLH; IPR002085: Zinc-containing alcohol dehydrogenase superfamily putative oxidoreductase	

ECOLI03133	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Acetyl-CoA carboxylase, biotin carboxyl carrier protein	Biotin carboxyl carrier protein	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Biotin carboxyl carrier protein of acetyl-CoA	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Biotin carboxyl carrier protein	Acetyl-CoA carboxylase, biotin carboxyl carrier protein	Biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase	MmdC methylmalonyl-coA decarboxylase gamma chain	Methylmalonyl-CoAdecarboxylase gamma chain	Acetyl-CoA carboxylase, biotin carboxyl carrier protein	Acetyl-CoA carboxylase, biotin carboxyl carrier protein	AccB	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Biotin carboxyl carrier protein	Acetyl-CoA carboxylase, bitoin carboxyl carrier protein	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Acetyl-CoA carboxylase, biotin carboxyl carrier protein	Biotin carboxyl carrier protein	Acetyl-CoA carboxylase, biotin carboxyl carrier protein	Lmo1356 protein	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Acetyl-CoA carboxylase, biotin carboxyl carrier protein	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	putative acetyl-CoA carboxylase, biotin carboxyl carrier protein	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Acetyl-CoA carboxylase, bitoin carboxyl carrier protein	identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531 acetyl-CoA carboxylase, biotin carboxyl carrier protein	
ECOLI03134	Biotin carboxylase	Acetyl-CoA carboxylase, biotin carboxylase	Biotin carboxylase	Biotin carboxylase subunit of acetyl CoA carboxylase	Biotin carboxylase	similar to GB:U07561,  and PID:514266; identified by sequence similarity; putative acetyl-coenzyme A carboxylase, biotin carboxylase	Biotin carboxylase	Acetyl-CoA carboxylase, biotin carboxylase subunit	Acetyl-CoA carboxylase, biotin carboxylase	Acetyl-CoA carboxylase, biotin carboxylase	AccC	Biotin carboxylase	Biotin carboxylase	Biotin carboxylase	Biotin carboxylase	Acetyl-CoA carboxylase, biotin carboxylase	Biotin carboxylase	Acetyl-CoA carboxylase, biotin carboxylase	Related to biotin carboxylase	Biotin carboxylase	Acetyl-CoA carboxylase, biotin carboxylase	Biotin carboxylase	putative acetyl-CoA carboxylase, biotin carboxylase	Biotin carboxylase	identified by match to protein family HMM PF00289; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; match to protein family HMM TIGR01369 acetyl-CoA carboxylase, biotin carboxylase	similar to GB:J02854, SP:P19105, SP:P24844, PID:188586, and PID:829623; identified by sequence similarity; putative acetyl-CoA carboxylase, biotin carboxylase	Acetyl-CoA carboxylase, biotin carboxylase, putative	Acetyl-CoA carboxylase, biotin carboxylase	Biotin carboxylase	
ECOLI03135	Uncharacterized protein yhdT	Putative uncharacterized protein	Putative uncharacterized protein STY3561	conserved hypothetical protein	Hypothetical protein yhdT	Putative uncharacterized protein yhdT	Residues 1 to 80 of 80 are 98 pct identical to residues 1 to 80 of a 80 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289825.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to unknown protein YhdT of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative membrane protein	Similar to: HI0974.1, YHDT_HAEIN conserved hypothetical membrane protein	Hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	Code: S; COG: COG3924 conserved hypothetical protein	Code: S; COG: COG3924 conserved hypothetical protein	Code: S; COG: COG3924; orf conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein yhdT	Hypothetical protein	membrane protein-like	Membrane protein	conserved hypothetical protein	Putative membrane protein precursor	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG3924	
ECOLI03136	Sodium/pantothenate symporter	Sodium/pantothenate symporter	Probable sodium/pantothenate symporter	putative sodium/pantothenate symporter	Hypothetical proline permease	Sodium/pantothenate symporter	Sodium/pantothenate symporter	Sodium/pantothenate symporter	Sodium/pantothenate symporter	CDS_ID OB0501 sodium:pantothenate symporter	Residues 1 to 485 of 485 are 99 pct identical to residues 1 to 485 of a 485 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289826.1 sodium-pantothenate symporter	Sodium/pantothenate symporter	Sodium/pantothenate symporter	IPR001734: Na+/solute symporter SSS family, sodium/pantothenate symporter	similar to Salmonella typhi CT18 sodium/pantothenate symporter (pantothenate permease) sodium/pantothenate symporter (pantothenate permease)	Similar to Haemophilus influenzae sodium/pantothenate symporter PanF or hi0975 SWALL:PANF_HAEIN (SWALL:P44963) (484 aa) fasta scores: E(): 2.5e-06, 22.98% id in 483 aa and to Chlamydia pneumoniae sodium:solute symporter family protein Cp0268 SWALL:Q9K2A8 (EMBL:AE002186) (444 aa) fasta scores: E(): 1e-99, 64.67% id in 436 aa putative sodium symporter	Sodium/pantothenate symporter, SSS family	Na+/proline, Na+/panthothenate symporters and related permeases PutP protein	SSS family sodium/pantothenate symporter	sodium/pantothenate symporter (pantothenate permease)	Code: H; COG: COG4145 sodium/pantothenate symporter	Code: H; COG: COG4145 sodium/pantothenate symporter	transcript_id=ENSOCUT00000017619	Code: H; COG: COG4145 sodium/pantothenate symporter	sodium/proline, sodium/panthothenate symporters	transcript_id=ENSETET00000005957	Sodium/pantothenate symporter	Sodium/pantothenate symporter	
ECOLI03137	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	putative ribosomal protein L11 methyltransferase	Methylase for 50S ribosomal subunit protein L11	Ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase	
ECOLI03138	tRNA-dihydrouridine synthase B	Nitrogen regulation protein NIFR3	NifR3-like protein	Dihydrouridine synthase family protein	Probable tRNA-dihydrouridine synthase 1	tRNA-dihydrouridine synthase B	tRNA-dihydrouridine synthase B	similar to GB:U20647, PID:2230871,  and PID:676873; identified by sequence similarity; putative NifR3/Smm1 family protein	Putative TIM-barrel enzyme, possible dehydrogenase, contains a highly conserved dihydrouridine synthase domain	TIM-barrel protein, nifR3 family	Putative dihydrouridine synthase	Possible NifR3-like protein	Probable tRNA-dihydrouridine synthase	Putative nitrogen regulation protein NifR3 family homolog	Putative nitrogen regulation protein NifR3 family homolog	Probable transcriptional regulator	Zinc-binding TIM-barrel protein, nifR3 family, putative	Nitrogen regulation protein Nifr3	Probable tRNA-dihydrouridine synthase	NifR3 protein	tRNA-dihydrouridine synthase B	tRNA-dihydrouridine synthase B	Putative tRNA-dihydrouridine synthase	Putative uncharacterized protein	TRNA-dihydrouridine synthase	NifR3 protein	Putative uncharacterized protein	Nitrogen regulation protein	tRNA-dihydrouridine synthase B	
ECOLI03139	DNA-binding protein fis	Putative fis-like DNA-binding protein	DNA-binding protein fis	Putative fis-like DNA-binding protein	DNA-binding protein fis	Putative fis-like DNA-binding protein	DNA-binding protein fis	DNA-binding protein fis	DNA-binding protein	putative factor-for-inversion stimulation protein	Site-specific DNA inversion stimulation factor	DNA-binding protein fis	DNA-binding protein fis	DNA-binding protein	DNA-binding protein	DNA-binding protein fis	DNA-binding protein fis	DNA-binding protein fis	DNA-binding protein Fis	DNA-binding protein	Factor-for-inversion stimulation protein	DNA-binding protein fis	DNA-binding protein fis	DNA-binding protein fis	DNA-binding protein fis	DNA-binding protein fis	Residues 1 to 98 of 98 are 100 pct identical to residues 1 to 98 of a 98 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289829.1 site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription	DNA-binding protein fis	Probable factor-for-inversion-stimulation transcription regulator protein	
ECOLI03140	Uncharacterized adenine-specific methylase yhdJ	DNA adenine modification methylase	Probable adenine specific DNA methyltransferase	Modification methylase CcrMI	Cell cycle regulated site-specific DNA- methyltransferase protein	Putative adenine-specific DNA-modification methylase	DNA-methyltransferase	Putative haemagglutinin associated protein	Hypothetical adenine-specific methylase yhdJ	similar to GB:M16893, SP:P07957, PID:150056, GB:M16893, SP:P07957, and PID:150056; identified by sequence similarity; putative modification methylase BabI	Haemagglutinin associated protein	predicted by Codon_usage predicted by Homology predicted by FrameD ADENINE DNA METHYLTRANSFERASE PROTEIN	ADENINE-SPECIFIC METHYLTRANSFERASE	Putative methyltransferase	adenine DNA methyltransferase	Possible adenine DNA methyltransferase	DNA methyltransferase	Adenine DNA methyltransferase protein	Residues 1 to 296 of 296 are 97 pct identical to residues 1 to 296 of a 296 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289830.1 putative methyltransferase	identified by match to protein family HMM PF01555 modification methylase	DNA methyltransferase	Cell cycle regulated site-specific DNA- methyltransferase protein	IPR001091: Site-specific DNA-methyltransferase (cytosine-N4-specific); IPR002052: N-6 Adenine-specific DNA methylase; IPR002295: N6 adenine-specific DNA methyltransferase, D21 class;IPR002941: DNA methylase N-4/N-6 putative methyltransferase	similar to BR0491, modification methylase BabI BabI, modification methylase BabI	Adenine DNA methyltransferase protein	TYPE II DNA MODIFICATION ENZYME	COG0863 adenine-specific methyltransferase	Similar to Escherichia coli hypothetical adenine-specific methylase YhdJ or B3262 SWALL:YHDJ_ECOLI (SWALL:P28638) (294 aa) fasta scores: E(): 2.3e-65, 58.71% id in 281 aa, and to Bacillus subtilis modification methylase BglII BglIIM SWALL:MTB2_BACSU (SWALL:Q45489) (360 aa) fasta scores: E(): 1.4e-22, 33.91% id in 286 aa putative DNA methylase	Putative methyltransferase	
ECOLI03141	Uncharacterized protein yhdU	Uncharacterized protein yhdU	Residues 10 to 68 of 75 are 98 pct identical to residues 1 to 59 of a 59 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289831.1 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhimurium putative periplasmic protein putative periplasmic protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhdU	Putative periplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative periplasmic protein	Putative periplasmic protein	Putative periplasmic protein	Putative periplasmic protein	Putative exported protein	Putative periplasmic protein	Putative periplasmic protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein yhdU	
ECOLI03142	Probable acrEF/envCD operon repressor	Potential acrEF/envCD operon repressor	Probable acrEF/envCD operon repressor	Transcriptional regulator, TetR family	IPR001647: Bacterial regulatory protein TetR, HTH motif transcriptional repressor for envCD (acrEF) (TetR/AcrR family)	similar to Salmonella typhimurium transcriptional repressor for envCD (acrEF) (TetR/AcrR family) transcriptional repressor for envCD (acrEF) (TetR/AcrR family)	Transcriptional repressor for envCD	Code: K; COG: COG1309 putative transcriptional regulator	Code: K; COG: COG1309 putative transcriptional regulator	transcriptional regulator, TetR family	Potential acrEF/envCD operon repressor	Potential acrEF/envCD operon repressor	Transcriptional regulator, TetR family	regulator AmrR identified by match to protein family HMM PF00440	transcriptional regulator, TetR family PFAM: regulatory protein, TetR KEGG: dsy:DSY4804 hypothetical protein	putative acrEF/envCD operon repressor	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Putative transcriptional regulator	Putative uncharacterized protein	Putative transcriptional regulator EnvR	Transcriptional regulator, TetR family	DNA-binding transcriptional regulator	Putative transcriptional regulator EnvR	Transcriptional regulator, TetR family	Putative transcriptional regulator EnvR	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03143	Acriflavine resistance protein E	Acriflavine resistance protein E	Transmembrane protein affects septum formation and cell membrane permeability	similar to Salmonella typhimurium transmembrane protein affecting septum formation and cell membrane permeability transmembrane protein affecting septum formation and cell membrane permeability	Multidrug resistance protein	Transmembrane protein affecting septum formation and cell membrane permeability	Secretion protein HlyD	transmembrane protein affects septum formation and cell membrane permeability; Code: M; COG: COG0845 AcrE	transmembrane protein affects septum formation and cell membrane permeability; Code: M; COG: COG0845 AcrE	Secretion protein HlyD	Secretion protein HlyD	Acriflavine resistance protein E	secretion protein HlyD	Acriflavine resistance protein E	efflux transporter, RND family, MFP subunit TIGRFAM: efflux transporter, RND family, MFP subunit PFAM: secretion protein HlyD family protein KEGG: dps:DP1698 related to acriflavine resistance protein E [precursor] septum formation and cell membrane permeability	membrane fusion protein HlyD family secretion protein. The secretion of a number of proteins/molecules require the help of members belonging to the ABC transporter family and a membrane fusion protein belonging to the HlyD family, TREMBL:Q8XRL2 (55% identity); SWISSPROT:P31223 (53% identity). Pfam (PF00529): HlyD family secretion protein. SignalP predicting signal peptide. TC (8.A.1): The Membrane Fusion Protein (MFP) Family. Family membership	efflux transporter, RND family, MFP subunit TIGRFAM: efflux transporter, RND family, MFP subunit PFAM: secretion protein HlyD family protein KEGG: she:Shewmr4_3837 efflux transporter, RND family, MFP subunit	secretion protein HlyD	acriflavine resistance protein E	efflux transporter, RND family, MFP subunit TIGRFAM: efflux transporter, RND family, MFP subunit PFAM: secretion protein HlyD family protein KEGG: mfa:Mfla_2557 secretion protein HlyD	multidrug resistance protein, AcrA/AcrE family KEGG: son:SO4693 multidrug resistance protein, AcrA/AcrE family	Efflux transporter, RND family, MFP subunit precursor	TIGRFAM: efflux transporter, RND family, MFP subunit PFAM: secretion protein HlyD family protein KEGG: slo:Shew_0031 efflux transporter, RND family, MFP subunit efflux transporter, RND family, MFP subunit	Transmembrane protein affecting septum formation and cell membrane permeability	Putative uncharacterized protein	Acriflavine resistance protein E	Putative acriflavin resistance protein A precursor	Cytoplasmic membrane lipoprotein	Acriflavine resistance protein E	
ECOLI03144	Acriflavine resistance protein F	pseudo	Acriflavine resistance protein F	IPR001036: Acriflavin resistance protein; IPR004764: Hydrophobe/amphiphile efflux-1 HAE1 RND family, multidrug transport protein, acriflavin resistance protein F	similar to Salmonella typhimurium RND family, multidrug transport protein, acriflavin resistance protein F RND family, multidrug transport protein, acriflavin resistance protein F	RND family multidrug transport protein	acridine resistance; Code: V; COG: COG0841 integral transmembrane protein	Acriflavine resistance protein F	Acriflavine resistance protein F	acriflavine resistance protein F	Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family precursor	Integral transmembrane protein; acridine resistance	Putative uncharacterized protein	Acriflavine resistance protein F	Multidrug efflux system protein	Acriflavine resistance protein F	Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family precursor	Putative uncharacterized protein	Putative uncharacterized protein	RND family, multidrug transport protein,acriflavin resistance protein F	AcrB protein	AcrB protein	AcrB protein	Acriflavin resistance protein F	Acriflavine resistance protein F	AcrB protein	AcrB protein	pseudo	Acriflavine resistance protein	
ECOLI03144	Acriflavine resistance protein F	pseudo	Acriflavine resistance protein F	IPR001036: Acriflavin resistance protein; IPR004764: Hydrophobe/amphiphile efflux-1 HAE1 RND family, multidrug transport protein, acriflavin resistance protein F	similar to Salmonella typhimurium RND family, multidrug transport protein, acriflavin resistance protein F RND family, multidrug transport protein, acriflavin resistance protein F	RND family multidrug transport protein	acridine resistance; Code: V; COG: COG0841 integral transmembrane protein	Acriflavine resistance protein F	Acriflavine resistance protein F	acriflavine resistance protein F	Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family precursor	Integral transmembrane protein; acridine resistance	Putative uncharacterized protein	Acriflavine resistance protein F	Multidrug efflux system protein	Acriflavine resistance protein F	Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family precursor	Putative uncharacterized protein	Putative uncharacterized protein	RND family, multidrug transport protein,acriflavin resistance protein F	AcrB protein	AcrB protein	AcrB protein	Acriflavin resistance protein F	Acriflavine resistance protein F	AcrB protein	AcrB protein	pseudo	Acriflavine resistance protein	
ECOLI03145	Uncharacterized protein yhdV	Hypothetical protein yhdV	Uncharacterized protein yhdV	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 possible lipoprotein possible lipoprotein	Putative outer membrane lipoprotein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhdV	Putative uncharacterized protein precursor	Putative uncharacterized protein yhdV	Putative lipoprotein	Putative outer membrane lipoprotein precursor	Predicted outer membrane protein	Putative lipoprotein	Putative outer membrane lipoprotein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Possible lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Possible lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	


ECOLI03147	Putative amino-acid ABC transporter permease protein yhdX	ABC transporter for amino acids, membrane component	ABC-type amino acid transport system, permease component	ABC transporter, membrane spanning protein	Permease protein of amino acid ABC transporter	Probable amino acid ABC transporter, permease protein	putative amino acid ABC transporter, permease protein	Hypothetical amino-acid ABC transporter permease protein yhdX	similar to GP:15156665; identified by sequence similarity; putative amino acid ABC transporter, permease protein	Amino acid ABC transporter, permease protein	Putative amino acid ABC transporter permease protein	L-amino acid ABC transporter permease protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GENERAL L-AMINO ACID TRANSPORT PERMEASE ABC TRANSPORTER PROTEIN	Amino acid ABC transporter, permease protein	GENERAL L-AMINO ACID TRANSPORT SYSTEM PERMEASE PROTEIN AAPQ	Amino acid ABC transporter, permease protein	Putative transport system permease protein	amino acid ABC transporter, permease protein	Polar amino acid ABC transport permease protein aapQ-1	ABC-type amino acid transport system, permease component	periplasmic substrate-binding and integral membrane protein ABC-type permease for basic amino acids and glutamine	ABC-type amino acid transport system permease component	General L-amino acid ABC transporter	ABC transporter for amino acids, membrane component	general L-amino acid transport system permease protein AapQ	General amino acid ABC transporter, permease protein	similar to permease protein VC1361 Vibrio cholerae (strain N16961) amino acid ABC transporter	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 amino acid ABC transporter, permease protein	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 general amino acid ABC transporter, permease protein	
ECOLI03148	Inner membrane amino-acid ABC transporter permease protein yhdY	ABC-type amino acid transport system, permease component	ABC transporter, membrane spanning protein	Permease protein of amino acid ABC transporter	Probable amino acid ABC transporter, permease protein	putative ABC-type amino acid transport system, permease component	Hypothetical amino-acid ABC transporter permease protein yhdY	similar to SP:P45768; identified by sequence similarity; putative amino acid ABC transporter, permease protein	Amino acid ABC transporter, permease protein	Putative amino acid ABC transporter permease protein	Putative amino acid ABC transporter permease protein	L-amino acid ABC transporter permease protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GENERAL L-AMINO ACID TRANSPORT PERMEASE ABC TRANSPORTER PROTEIN	Amino acid ABC transporter, permease protein	Putative amino acid ABC transporter permease protein	GENERAL L-AMINO ACID TRANSPORT SYSTEM PERMEASE PROTEIN AAPM	Amino acid ABC transporter, permease protein	Putative transport system permease protein	amino acid ABC transporter, permease protein	Polar amino acid ABC transport permease protein aapM-1	ABC-type amino acid transport system, permease component	Residues 1 to 368 of 368 are 98 pct identical to residues 1 to 368 of a 368 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289839.1 putative transport system permease protein	permease protein of amino acid ABC transporter	General L-amino acid ABC transporter	general L-amino acid transport system permease protein AapM	General amino acid ABC transporter, permease protein	Similar to amino-acid ABC transporter permease protein yhdY	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 amino acid ABC transporter, permease protein	identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 general amino acid ABC transporter, permease protein	
ECOLI03149	Uncharacterized amino-acid ABC transporter ATP- binding protein yhdZ	Amino acid ABC transporter, ATP-binding protein	Probable ABC transporter ATP-binding protein PEB1C	ABC-type polar amino acid transport system, ATPase component	ABC transporter, nucleotide binding/ATPase protein	ATP-binding protein of amino acid ABC transporter	Probable amino acid ABC transporter, ATP-binding protein	Glutamate transport ATP-binding protein gluA	putative amino acid ABC transporter, ATP-binding protein	Hypothetical amino-acid ABC transporter ATP- binding protein yhdZ	Amino acid ABC transporter, ATP-binding protein	similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, and PID:553171; identified by sequence similarity; putative amino acid ABC transporter, ATP-binding protein	ABC-type polar amino acid transport system, ATPase component	Amino acid ABC transporter, ATP-binding protein	Amino acid ABC transporter, ATP-binding protein	Putative amino acid ABC transporter ATP-binding protein	Putative amino acid ABC transporter ATP-binding protein	L-amino acid ABC transporter ATP-binding protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GENERAL L-AMINO ACID TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN	Amino acid ABC transporter, ATP-binding protein	Putative amino acid ABC transporter ATP-binding protein	GENERAL L-AMINO ACID TRANSPORT ATP-BINDING PROTEIN AAPP	Amino acid ABC transporter, ATP-binding protein	Putative ATP-binding component of a transport system	amino acid ABC transporter, ATP-binding protein	Amino acid ABC transporter, ATP-binding protein aapP-1	ABC-type polar amino acid transport system, ATPase component	Residues 1 to 252 of 252 are 99 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289840.1 putative ATP-binding component of a transport system	identified by similarity to SP:Q52666 glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein	




ECOLI03151	Uncharacterized protein yrdB	Putative uncharacterized protein yrdB	Conserved hypothetical protein	Hypothetical protein yrdB	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP3032	Putative uncharacterized protein yrdB	Putative uncharacterized protein	Residues 1 to 85 of 85 are 97 pct identical to residues 1 to 85 of a 85 aa protein from Escherichia coli K12 ref: NP_417739.1 orf, conserved hypothetical protein	Similar to unknown protein YrdB of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative periplasmic protein	conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy putative unknown membrane associated protein YrdB	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yrdB	protein of unknown function DUF1488 PFAM: protein of unknown function DUF1488 KEGG: son:SO0041 hypothetical protein	conserved hypothetical protein	protein of unknown function DUF1488 PFAM: protein of unknown function DUF1488 KEGG: shm:Shewmr7_0036 protein of unknown function DUF1488	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03150	Protein yrdA	Transferase	Transferase	Acetyltransferase	Acetyltransferase, CysE/LacA/LpxA/NodL family	Putative uncharacterized protein	Putative uncharacterized protein Ta0552	Carbonic anhydrase/acetyltransferase, containing bacterial transferase hexapeptide repeat	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative acetyltransferase	Carbonic anhydrase, family 3	Putative transferase	Bacterial transferase family protein	Putative uncharacterized protein	Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily	Acetyltransferase	Putative acetyltransferase/acyltransferase	Transferase; possible acetyltransferase/acyltransferase	Hexapeptide transferase family protein	Putative carbonic anhydrase, family 3	Protein yrdA	identified by match to protein family HMM PF00132 bacterial transferase family protein	Carbonic anhydrase, family 3	Carbonic anhydrase, family 3	Putative transferase	Ferripyochelin binding protein	Putative uncharacterized protein	
ECOLI03152	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate 5-dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate 5-dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate 5-dehydrogenase	Putative shikimate 5-dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate 5-dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate 5-dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate 5-dehydrogenase	Shikimate dehydrogenase	Putative shikimate dehydrogenase	Shikimate dehydrogenase	Shikimate dehydrogenase	
ECOLI03153	Putative ribosome maturation factor rimN	Sll1866 protein	Putative ribosome maturation factor rimN	Putative ribosome maturation factor rimN	Vng2312c	Translation factor	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein in the Sua5/YciO/YrdC family	Putative uncharacterized protein	Putative ribosome maturation factor rimN	Putative ribosome maturation factor rimN	Putative ribosome maturation factor rimN	Putative translation factor	Sua5 protein	Putative ribosome maturation factor rimN	Putative uncharacterized protein	Putative translation factor	Uncharacterized protein ML1136	Putative translation factor	Putative Sua5/YciO/YrdC family protein	Protein yrdC	DNA binding protein	Sua5/YciO/YrdC family protein	Sua5/YciO/YrdC/YwlC family protein	Putative ribosome maturation factor rimN	Sua5/YciO/YrdC/YwlC family protein	Putative ribosome maturation factor rimN	Putative ribosome maturation factor rimN	
ECOLI03154	Uncharacterized protein yrdD	Putative uncharacterized protein	DNA topoisomerase I-related protein	Putative uncharacterized protein yrdD	putative DNA topoisomerase I-related protein	Hypothetical protein yrdD	DNA topoisomerase I-related protein	Topoisomerase DNA-binding C4 zinc finger domain protein	DNA topoisomerase I-related protein	Putative DNA topoisomerase	DNA topoisomerase I-related protein	Residues 9 to 180 of 180 are 98 pct identical to residues 1 to 172 of a 172 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289845.1 putative DNA topoisomerase	Putative DNA-binding protein	Similar to putative DNA topoisomerase YrdD of Escherichia coli	IPR000380: DNA topoisomerase I putative DNA topoisomerase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative DNA-binding protein	DNA topoisomerase I	Similar to: HI0656.1, YRDD_HAEIN Zn-finger domain associated with topoisomerase type I	Zn-finger domain associated with topoisomerase type I TopA protein	Zn-finger domain associated with topoisomerase type I	Putative DNA topoisomerase	identified by similarity to SP:P39814; match to protein family HMM PF01396 topoisomerase DNA-binding C4 zinc finger domain protein	conserved DNA topoisomerase I-related protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative DNA topoisomerase; C4 zinc finger domain protein	Code: L; COG: COG0551 putative DNA topoisomerase	putative DNA topoisomerase	Code: L; COG: COG0551 putative DNA topoisomerase	Putative DNA topoisomerase	
ECOLI03154	Uncharacterized protein yrdD	Putative uncharacterized protein	DNA topoisomerase I-related protein	Putative uncharacterized protein yrdD	putative DNA topoisomerase I-related protein	Hypothetical protein yrdD	DNA topoisomerase I-related protein	Topoisomerase DNA-binding C4 zinc finger domain protein	DNA topoisomerase I-related protein	Putative DNA topoisomerase	DNA topoisomerase I-related protein	Residues 9 to 180 of 180 are 98 pct identical to residues 1 to 172 of a 172 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289845.1 putative DNA topoisomerase	Putative DNA-binding protein	Similar to putative DNA topoisomerase YrdD of Escherichia coli	IPR000380: DNA topoisomerase I putative DNA topoisomerase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative DNA-binding protein	DNA topoisomerase I	Similar to: HI0656.1, YRDD_HAEIN Zn-finger domain associated with topoisomerase type I	Zn-finger domain associated with topoisomerase type I TopA protein	Zn-finger domain associated with topoisomerase type I	Putative DNA topoisomerase	identified by similarity to SP:P39814; match to protein family HMM PF01396 topoisomerase DNA-binding C4 zinc finger domain protein	conserved DNA topoisomerase I-related protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative DNA topoisomerase; C4 zinc finger domain protein	Code: L; COG: COG0551 putative DNA topoisomerase	putative DNA topoisomerase	Code: L; COG: COG0551 putative DNA topoisomerase	Putative DNA topoisomerase	
ECOLI03155	Protein smg	Protein smg homolog	Protein smg homolog	Protein smg	Putative Smg protein	Protein smg	Protein smg homolog	Protein smg homolog	Protein smg homolog	Protein smg homolog	Protein smg	Protein smg	Protein smg homolog	Protein smg homolog	Protein smg	Protein smg homolog	Protein smg	Protein smg homolog	Residues 1 to 157 of 157 are 100 pct identical to residues 1 to 157 of a 157 aa protein from Escherichia coli K12 ref: NP_417743.1 orf, conserved hypothetical protein	Protein smg	Protein smg homolog	Protein smg homolog	Protein smg homolog	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark Smg	IPR007456: Protein of unknown function DUF494 putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Protein smg homolog	Protein smg	Protein smg homolog	
ECOLI03156	Protein smf	DNA processing protein DprA	DNA processing chain A	Protein smf	DNA processing chain A	Protein smf	Smf protein DNA processing chain A	DprA/SMF protein, putative DNA processing factor	Putative DNA processing protein	DNA processing protein DprA, putative	DNA processing chain A	DprA	Putative uncharacterized protein	DNA processing chain A	Smf protein	Smf protein	Competence protein dprA	DNA processing chain A	Putative uncharacterized protein STY4392	DNA processing protein	Smf protein DNA processing chain A	Nucleotide-binding SMF protein	SMF family protein	DNA processing chain A	Hypothetical Smf protein	Hypothetical protein smf	identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732 DNA processing protein (smf family)	Smf protein	Putative uncharacterized protein smf	
ECOLI03157	Peptide deformylase	Peptide deformylase	Peptide deformylase	Peptide deformylase 2	Peptide deformylase	Peptide deformylase	Peptide deformylase	Peptide deformylase 2	Peptide deformylase	Peptide deformylase	Peptide deformylase 1	Peptide deformylase	Peptide deformylase 1	Peptide deformylase	Peptide deformylase	Peptide deformylase	Peptide deformylase	Peptide deformylase	Peptide deformylase 2	Peptide deformylase	Peptide deformylase	Peptide deformylase	Peptide deformylase 1	Peptide deformylase 1	Peptide deformylase 1	Peptide deformylase	Peptide deformylase	Peptide deformylase 1	Peptide deformylase	
ECOLI03158	Methionyl-tRNA formyltransferase	weakly similar to sp|P32785 Saccharomyces cerevisiae YBL013w FMT1 Methionyl-tRNA Transformylase, hypothetical start	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	similar to uniprot|P32785 Saccharomyces cerevisiae YBL013w FMT1 Methionyl-tRNA Transformylase;	identified by match to PFAM protein family HMM PF02911 methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	Methionyl-tRNA formyltransferase	
ECOLI03159	Ribosomal RNA small subunit methyltransferase B	16S rRNA m(5)C 967 methyltransferase	Sun protein	Ribosomal RNA small subunit methyltransferase B	Ribosomal RNA small subunit methyltransferase B	Ribosomal RNA small subunit methyltransferase B	tRNA/rRNA cytosine-C5-methylase	Sun protein	Putative RNA-binding Sun protein	Sun protein	hypothetical sun protein	Sun protein	Probable RNA-binding Sun protein	Sun protein	rRNA methyltransferase RsmB	16S RNA methyltransferase	Ribosomal RNA small subunit methyltransferase B	Ribosomal RNA small subunit methyltransferase B	Sun protein	Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) (rRNA	Sun protein, putative	16S rRNA m(5)C 967 methyltransferase	Sun protein	Ribosomal RNA small subunit methyltransferase B	Related to SUN protein	Lmo1822 protein	pseudo	NOL1/NOP2/Sun family protein	Putative Sun protein	
ECOLI03160	Trk system potassium uptake protein trkA	Trk system potassium uptake protein trkA homolog	Trk system potassium uptake protein trkA	Trk system K+ uptake protein trkA	Trk system potassium uptake protein TrkA	TrkA	Potassium uptake protein TrkA	Potassium uptake protein TrkA	Trk system potassium uptake protein trkA	Potassium uptake protein	Trk system potassium uptake protein trkA	Probable Trk system potassium uptake protein	Trk system K+ uptake protein TrkA	Putative potassium uptake protein TrkA	Trk system potassium uptake protein trkA	potassium uptake protein TrkA	Potassium uptake protein, Trk family	similar to GP:15156526, and SP:P39448; identified by sequence similarity; putative potassium uptake protein TrkA	Potassium uptake protein TrkA	Trk system potassium uptake protein	Trk system potassium uptake protein	Potassium uptake protein TrkA	K+ transport protein	Potassium uptake protein	PMID: 8268235 PMID: 8412700 best DB hits: BLAST: gb:AAB90401.1; (AE001046) TRK potassium uptake system protein; E=4e-41 pir:T45222; heat shock protein trkA [imported] - Methanosarcina; E=2e-38 pir:E83643; potassium uptake protein TrkA PA0016 [imported] -; E=3e-38 COG: AF0838; COG0569 K+ transport systems, NAD-binding component; E=4e-42 PFAM: PF02254; KTN NAD-binding domain; E=1.1e-15 PF02080; Potassium channel; E=2.9e-12 PF02254; KTN NAD-binding domain; E=3.1e-08 TRK potassium uptake system protein (trkA-2)	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE TRK SYSTEM POTASSIUM UPTAKE PROTEIN	Potassium uptake protein trkA	Trk system potassium uptake protein TrkA	Trk system potassium uptake protein	
ECOLI03162	Uncharacterized protein yhdL	Putative uncharacterized protein	Putative uncharacterized protein	Similar to unknown protein YhdL of Escherichia coli	Putative uncharacterized protein	Putative cytoplasmic protein	Code: S; COG: COG3036 Uncharacterized conserved protein	Code: S; COG: COG3036 Uncharacterized conserved protein	Putative uncharacterized protein	Hypothetical protein	Putative regulator	Hypothetical protein	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03161	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large conductance mechanosensitive channel protein	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	
ECOLI03163	HTH-type transcriptional regulator zntR	Predicted transcriptional regulator	Transcriptional regulator, MerR family	Putative Zn(II)-responsive regulator	Transcriptional regulator, MerR family	Mercuric resistance operon regulatory protein	Possible regulatory protein, MerR family	putative transcriptional regulator, MerR family	Zn(II)-responsive regulator of zntA	Transcriptional regulator, MerR family	identified by match to protein family HMM PF00376 transcriptional regulator, MerR family	Transcriptional regulator, MerR family	Transcriptional regulator, MerR family	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Putative transcriptional regulator	Transcriptional regulator, MerR family	HTH-type transcriptional regulator zntR	probable transcriptional regulator	Heavy metal resistance transcriptional regulator Hmrr, MerR family	Transcriptional regulator	SC6A11.13, possible MerR-family transcriptional regulator, len: 132 aa; similar to many e.g. TR:Q9X5V4 (EMBL:AF127795) heavy metal regulator HmrR from Rhizobium leguminosarum (biovar viciae) (129 aa) fasta scores; opt: 228, z-score: 295.1, E(): 5e-09, 35.7% identity in 129 aa overlap. Contains Pfam match to entry PF00376 merR, Bacterial regulatory proteins, merR family and possible helix-turn-helix motif score 1747 (+5.14 SD) in ID at residue 1 putative MerR-family transcriptional regulator	Predicted transcriptional regulator	Transcriptional regulator	MerR-family transcriptional regulator	Probable transcription regulator protein	Zn(II)-responsive transcriptional regulator of ZntA	identified by match to protein family HMM PF00376 transcriptional regulator, MerR family	Probable transcriptional regulator protein	Hypothetical protein SE0081	
ECOLI03164	Uncharacterized protein yhdN	Hypothetical protein yhdN	Putative uncharacterized protein yhdN	hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhdN	conserved hypothetical protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein yhdN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03165	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	identified by match to TIGR protein family HMM TIGR00059 ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	50S ribosomal protein L17	
ECOLI03166	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	identified by match to PFAM protein family HMM PF03118 DNA-directed RNA polymerase, alpha subunit	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase subunit alpha	
ECOLI03167	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	identified by match to TIGR protein family HMM TIGR01018 ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4 A	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	30S ribosomal protein S4	
ECOLI03168	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	identified by match to PFAM protein family HMM PF00411 ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	30S ribosomal protein S11	
ECOLI03169	30S ribosomal protein S13	conserved hypothetical protein;	Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency. [Source:SGD;Acc:S000005025]	30S ribosomal protein S13	37S ribosomal protein subunit sws2, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC1795.07]	similar to sp|P53937 Saccharomyces cerevisiae YNL081c singleton, start by similarity	30S ribosomal protein S13	30S ribosomal protein S13P	30S ribosomal protein S13	30S ribosomal protein S13	30S ribosomal protein S13P	30S ribosomal protein S13	30S ribosomal protein S13	30S ribosomal protein S13P	30S ribosomal protein S13P	30S ribosomal protein S13	30S ribosomal protein S13	30S ribosomal protein S13	highly similar to uniprot|P53937 Saccharomyces cerevisiae YNL081c;	DEHA2A11704p;similar to uniprot|P53937 Saccharomyces cerevisiae YNL081C SWS2 Putative mitochondrial ribosomal protein of the small subunit;	30S ribosomal protein S13P	30S ribosomal protein S13P	30S ribosomal protein S13P	30S ribosomal protein S13P	similar to SP:P36924, GB:S54911,  and PID:265588; identified by sequence similarity; putative ribosomal protein S13	30S ribosomal protein S13	30S ribosomal protein S13	30S ribosomal protein S13	30S ribosomal protein S13	
ECOLI03171	Preprotein translocase subunit secY	Protein translocase subunit secY	Preprotein translocase subunit secY	Preprotein translocase secY subunit	Preprotein translocase secY subunit	Preprotein translocase SecY subunit	Preprotein translocase secY subunit	Preprotein translocase subunit secY	Preprotein translocase secY subunit	Preprotein translocase subunit secY	Preprotein translocase subunit secY	Preprotein translocase subunit secY	Preprotein translocase subunit secY	Preprotein translocase secY subunit	Preprotein translocase subunit secY	identified by match to PFAM protein family HMM PF03023 preprotein translocase SecY subunit	Preprotein translocase SecY subunit	Preprotein translocase secY subunit	Preprotein translocase secY subunit	Preprotein translocase SecY subunit	Preprotein translocase subunit secY	Preprotein translocase SecY subunit	Preprotein translocase subunit secY	Preprotein translocase subunit secY	Preprotein translocase SecY subunit	Preprotein translocase secY subunit	Preprotein translocase, SecY subunit	Preprotein translocase SecY subunit	Preprotein translocase subunit secY	
ECOLI03172	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	identified by match to PFAM protein family HMM PF00256 ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	50S ribosomal protein L15	
ECOLI03173	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	50S ribosomal protein L30	putative ribosomal protein L30/L7E	
ECOLI03174	30S ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5P	30S ribosomal protein S5P	30S ribosomal protein S5	30S ribosomal protein S5P	30S ribosomal protein S5P	30S ribosomal protein S5	30S ribosomal protein S5P	30S ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5P	30S ribosomal protein S5P	30S ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5P	30S ribosomal protein S5P	30S ribosomal protein S5P	identified by match to PFAM protein family HMM PF03719 ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5	30S ribosomal protein S5P	30S ribosomal protein S5P	30S ribosomal protein S5	
ECOLI03175	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	identified by match to TIGR protein family HMM TIGR00060 ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	50S ribosomal protein L18	
ECOLI03176	50S ribosomal protein L6	weakly similar to sp|P32904 Saccharomyces cerevisiae YHR147c MRPL6 ribosomal protein of the large subunit, mitochondrial and DEHA0B02739g Debaryomyces hansenii, start by similariy	50S ribosomal protein L6	Putative 60S ribosomal protein L6, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC12G12.08]	50S ribosomal protein L6	50S ribosomal protein L6P	50S ribosomal protein L6	50S ribosomal protein L6P	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	DEHA2B02706p;similar to uniprot|P32904 Saccharomyces cerevisiae YHR147c MRPL6 mitochondrial ribosomal protein;	identified by match to PFAM protein family HMM PF00347 ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6P	50S ribosomal protein L6P	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	50S ribosomal protein L6	
ECOLI03177	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8P	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8P	30S ribosomal protein S8P	30S ribosomal protein S8P	identified by match to TIGR protein family HMM TIGR01808 ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8P	30S ribosomal protein S8P	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	30S ribosomal protein S8	
ECOLI03178	30S ribosomal protein S14	30S ribosomal protein S14	highly similar to sp|P10663 Saccharomyces cerevisiae YPR166c MRP2 ribosomal protein S14 singleton, start by similarity	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	highly similar to uniprot|P10663 Saccharomyces cerevisiae YPR166c MRP2;	similar to GB:M15856, GB:M76722, GB:X54516, SP:P06858, PID:307138, PID:34383, PID:34405,  and PID:553523; identified by sequence similarity; putative ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14 1	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	Ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	30S ribosomal protein S14	
ECOLI03179	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5P	similar to GB:L06801, GB:U10307, GB:U31120, GB:X69079, SP:P35225, PID:1045452, PID:1127548, PID:186276, PID:580330,  and PID:673420; identified by sequence similarity; putative ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5P	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	50S ribosomal protein L5	
ECOLI03180	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	50S ribosomal protein L24	
ECOLI03181	50S ribosomal protein L14	mitochondrial 60S ribosomal protein L38;	Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels. [Source:SGD;Acc:S000001653]	similar to sp|P35996 Saccharomyces cerevisiae YKL170w MRPL38 ribosomal protein of the large subunit (L14), start by similarity	50S ribosomal protein L14	54S ribosomal protein L38, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC887.07]	highly similar to sp|P35996 Saccharomyces cerevisiae YKL170w MRPL38 ribosomal protein of the large subunit (L14), mitochondrial singleton, start by similarity	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	highly similar to uniprot|P35996 Saccharomyces cerevisiae YKL170w MRPL38;	DEHA2B10296p;highly similar to uniprot|P35996 Saccharomyces cerevisiae YKL170W MRPL38 Mitochondrial ribosomal protein of the large subunit;	50S ribosomal protein L14P	similar to GB:M33388, GB:M20403, GB:M24499, GB:X08006, SP:P10635, PID:181304, PID:181350, PID:30451, and PID:522195; identified by sequence similarity; putative ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	50S ribosomal protein L14	
ECOLI03182	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17P	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17P	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17P	30S ribosomal protein S17P	identified by match to PFAM protein family HMM PF00366 ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	30S ribosomal protein S17	
ECOLI03183	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	Ribosomal protein L29	50S ribosomal protein L29	putative ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012 ribosomal protein L29	identified by match to TIGR protein family HMM TIGR00012 ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	50S ribosomal protein L29	
ECOLI03184	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	30S ribosomal protein S3	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	highly similar to uniprot|P38064 Saccharomyces cerevisiae YBL038w MRPL16;	identified by match to PFAM protein family HMM PF00826 ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	50S ribosomal protein L16	
ECOLI03185	30S ribosomal protein S3	30S ribosomal protein S3	30S ribosomal protein S3P	30S ribosomal protein S3P	30S ribosomal protein S3	30S ribosomal protein S3P	30S ribosomal protein S3	30S ribosomal protein S3P	30S ribosomal protein S3	30S ribosomal protein S3	30S ribosomal protein S3P	30S ribosomal protein S3P	30S ribosomal protein S3	30S ribosomal protein S3	30S ribosomal protein S3	DEHA2G22770p;highly similar to uniprot|P05750 Saccharomyces cerevisiae YNL178W RPS3 Protein component of the small (40S) ribosomal subunit has apurinic/apyrimidinic (AP) endonuclease activity;	30S ribosomal protein S3P	similar to GB:Z26317, SP:Q14126,  and PID:416178; identified by sequence similarity; putative ribosomal protein S3	30S ribosomal protein S3	30S ribosomal protein S3	30S ribosomal protein S3	30S ribosomal protein S3	30S ribosomal protein S3	30S ribosomal protein S3	30S ribosomal protein S3P	30S ribosomal protein S3P	30S ribosomal protein S3P	30S ribosomal protein S3P	30S ribosomal protein S3	
ECOLI03186	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	identified by match to PFAM protein family HMM PF00418 ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	50S ribosomal protein L22	
ECOLI03187	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	identified by match to TIGR protein family HMM TIGR01025 ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19P	30S ribosomal protein S19P	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	30S ribosomal protein S19	
ECOLI03188	50S ribosomal protein L2	60S ribosomal protein RML2, mitochondrial precursor;	Mitochondrial ribosomal protein of the large subunit, has similarity to E. coli L2 ribosomal protein; fat21 mutant allele causes inability to utilize oleate and may interfere with activity of the Adr1p transcription factor. [Source:SGD;Acc:S000000776]	similar to sp|P32611 Saccharomyces cerevisiae Putative 60S mitochondrial ribosomal protein YEL050C, hypothetical start	50S ribosomal protein L2	60S ribosomal protein rml2, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC16C4.15]	similar to sp|P32611 Saccharomyces cerevisiae YEL050c RML2 ribosomal L2 protein, mitochondrial, hypothetical start	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2, putative	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	highly similar to uniprot|P32611 Saccharomyces cerevisiae YEL050c RML2;	DEHA2E05478p;similar to uniprot|P32611 Saccharomyces cerevisiae YEL050C RML2 Mitochondrial ribosomal protein of the large subunit;	identified by match to PFAM protein family HMM PF03947 ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	50S ribosomal protein L2	
ECOLI03189	50S ribosomal protein L23	50S ribosomal protein L23P	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23P	50S ribosomal protein L23P	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23P	50S ribosomal protein L23P	50S ribosomal protein L23P	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	50S ribosomal protein L23	
ECOLI03190	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	similar to GB:L07633, GB:U10360, SP:Q06323, PID:186513,  and PID:551491; identified by sequence similarity; putative ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	50S ribosomal protein L4	
ECOLI03191	50S ribosomal protein L3	Mitochondrial ribosomal protein of the large subunit. [Source:SGD;Acc:S000003452]	similar to sp|P31334 Saccharomyces cerevisiae YGR220c MRPL9 ribosomal protein of the large subunit, mitochondrial, start by similarity	50S ribosomal protein L3	60S ribosomal protein L9, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC644.17c]	similar to sp|P31334 Saccharomyces cerevisiae YGR220c MRPL9 ribosomal protein of the large subunit, mitochondrial singleton, start by similarity	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	highly similar to uniprot|P31334 Saccharomyces cerevisiae YGR220c MRPL9;	DEHA2B02684p;similar to uniprot|P31334 Saccharomyces cerevisiae YGR220C MRPL9 mitochondrial ribosomal protein of the large subunit;	identified by match to PFAM protein family HMM PF00297 ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	50S ribosomal protein L3	
ECOLI03192	30S ribosomal protein S10	40S ribosomal protein S20 [Source:GeneDB_Spombe;Acc:SPCC576.09]	30S ribosomal protein S10	30S ribosomal protein S10P	30S ribosomal protein S10P	30S ribosomal protein S10	30S ribosomal protein S10P	30S ribosomal protein S10P	30S ribosomal protein S10	30S ribosomal protein S10P	30S ribosomal protein S10	30S ribosomal protein S10	30S ribosomal protein S10P	30S ribosomal protein S10	30S ribosomal protein S10	30S ribosomal protein S10	30S ribosomal protein S10P	30S ribosomal protein S10P	30S ribosomal protein S10P	30S ribosomal protein S10P	30S ribosomal protein S10P	identified by match to TIGR protein family HMM TIGR01046 ribosomal protein S10	30S ribosomal protein S10	30S ribosomal protein S10	30S ribosomal protein S10	30S ribosomal protein S10	30S ribosomal protein S10	30S ribosomal protein S10	30S ribosomal protein S10P	
ECOLI03193	Protein pioO	calcium-binding protein required for initiation of chromosome replication	PioO protein	Calcium-binding protein required for initiation of chromosome replication	Part of gsp divergon involved in type II protein secretion	Protein pioO	Calcium-binding protein required for initiation of chromosome replication	Part of gsp divergon involved in type II protein secretion	Part of gsp divergon involved in type II protein secretion	PioO protein	Part of gsp divergon involved in type II protein secretion	Part of gsp divergon involved in type II protein secretion	Putative T2SS component	
ECOLI03194	Probable general secretion pathway protein A	general secretion pathway protein A	Probable general secretion pathway protein A	Probable general secretion pathway protein A	KEGG: slo:Shew_1009 peptidoglycan-binding domain 1 protein peptidoglycan-binding domain 1 protein	Peptidoglycan-binding domain 1 protein	General secretory pathway component, cryptic	Putative general secretory pathway protein A	Peptidoglycan-binding domain 1 protein	General secretion pathway protein A	ATPase	General secretory pathway component, cryptic	GspA protein	General secretory pathway component, cryptic	General secretory pathway component, cryptic	Putative T2SS protein A	
ECOLI03195	Probable general secretion pathway protein C	Probable general secretion pathway protein C	Probable general secretion pathway protein C	putative general secretion pathway protein C	General secretory pathway component, cryptic	General secretion pathway protein C	General secretion pathway protein C precursor	Putative uncharacterized protein	General secretory pathway component, cryptic	General secretory pathway component, cryptic	GspC protein	General secretory pathway component, cryptic	General secretion pathway protein C	Putative T2SS protein C	
ECOLI03196	Probable general secretion pathway protein D	Type II secretion system protein D	identified by match to PFAM protein family HMM PF03378 type III secretion protein SctC	General secretion pathway protein D	General secretion pathway protein D	Type II secretory pathway, component EpsD	General secretory pathway protein D	putative type II secretory pathway, component EpsD	Outer membrane secretion protein Q	General secretion pathway protein D	Probable general secretion pathway protein D	Type III secretion protein SctC	General secretion pathway protein D	General secretion pathway protein D	General secretion pathway protein D	Type II secretion protein	Type II secretory pathway, component EpsD	General secretory pathway protein D	Probable Yop proteins translocation protein C/general secretion pathway protein	General secretion pathway protein D	type II protein secretion LspD	conserved gene type II protein secretion LspD	type II protein secretion LspD	Similar to many OutD, general secretion protein, orthologues that are thought to be involved in the recognition of secreted proteins: Chlamydia trachomatis putative general secretion protein D or ct674 SWALL:O84681 (EMBL:AE001337) (921 aa) fasta scores: E(): 0, 73.52% id in 933 aa. Also similar to several Type III secretion system proteins. putative general secretion protein	Type II secretion system protein D	General secretion pathway protein D	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative general secretion pathway protein	Type II secretion pathway protein XcpQ	type II secretion system protein D	
ECOLI03197	Probable general secretion pathway protein E	identified by match to PFAM protein family HMM PF03205 general secretion pathway protein E	Probable type IV pilus assembly protein	General secretion pathway protein E	Probable type II secretion system protein	General secretion pathway protein E	General secretory pathway protein E	XcpR	Predicted ATPases involved in pili biogenesis, PilB homologs	Probable general secretion pathway protein E	General secretion pathway protein E	pseudo	General secretion pathway protein E	Putative general secretion pathway protein	general secretion pathway protein E	ATPases involved in pili biogenesis	General secretion pathway protein E	general secretion proteinE	General secretion pathway protein E, ATPase	Predicted ATPases involved in pili biogenesis, PilB homologs	Gen. Secretion Protein E	Bacterial type II secretion system protein E	Probable general secretion pathway protein e	type II protein secretion ATPase LspE	conserved gene type II secretory pathway protein E	type II protein secretion ATPase LspE	Probable type II secretion system protein	Similar to Pseudomonas aeruginosa general secretion pathway protein E XcpR SWALL:GSPE_PSEAE (SWALL:Q00512) (502 aa) fasta scores: E(): 6.1e-69, 47.63% id in 487 aa, and to Chlamydia pneumoniae genral secretion protein E GspE SWALL:Q9Z790 (EMBL:AE001662) (496 aa) fasta scores: E(): 2.3e-133, 75.86% id in 493 aa general secretion pathway protein E	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter general secretion pathway protein E (Type II traffic warden ATPase)	
ECOLI03198	Putative general secretion pathway protein F	Type II secretion system protein F	Fimbrial assembly protein PilC2	General secretory pathway protein F	Putative general secretion pathway protein F	General secretion pathway protein F	Putative ABC transporter ComYB; probably part of the DNA transport machinery	general secretion proteinF	ComG operon protein 2 homolog	Gen. Secretion Protein F	Bacterial type II secretion system protein	Probable general secretory pathway f transmembrane protein	type II secretory pathway protein LspF	conserved gene type II protein secretion LspF	type II secretory pathway protein LspF	General secretion pathway protein F	Type II secretion system protein F	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter general secretion pathway protein F	Type II secretion pathway protein XcpS	General secretion pathway protein F	type II secretion system protein F	General secretion pathway protein F	Type II secretory pathway, PilC-like	General secretion pathway protein F	general secretion pathway protein F	General secretion pathway protein F	General secretion pathway protein F	General secretion pathway protein F	Code: NU; COG: COG1459 putative type II secretion protein	
ECOLI03199	Putative general secretion pathway protein G	Type II secretion system protein G	General secretion pathway protein G	General secretion pathway protein G	General secretion pathway protein G	General secretory pathway protein G	putative type II secretory pathway, pseudopilin EpsG	Putative general secretion pathway protein G	General secretion pathway protein G	General secretion pathway protein G	PMID: 1640836 PMID: 8407845 best DB hits: BLAST: pir:B70338; general secretion pathway protein G - Aquifex aeolicus; E=0.065 swissprot:P31733; GSPG_AERHY GENERAL SECRETION PATHWAY PROTEIN G; E=0.29 pir:B82670; general secretory pathway protein G precursor XF1519; E=0.83 COG: aq_418; COG2165 General secretory pathway proteins G and H and; E=0.006 similar to general secretion pathway protein G	General secretion pathway protein G	Type II secretion protein	General secretion pathway protein G	Putative general secretion pathway g transmembrane protein	type II secretory pathway protein LspG	conserved gene type II protein secretion LspG	type II secretory pathway protein LspG	General secretion pathway protein G	Type II secretion system protein G	General secretion pathway protein G	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter general secretion pathway protein G	Type II secretion pathway protein XcpT	Type II secretory pathway, pseudopilin PulG	general secretory pathway protein G	type II secretion system protein G	identified by similarity to GP:4139240; match to protein family HMM PF07963; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532 general secretion pathway protein G	General secretion pathway protein G	identified by similarity to GP:4139240; match to protein family HMM PF07963; match to protein family HMM TIGR02532 general secretion pathway protein G	
ECOLI03200	Putative general secretion pathway protein H	Putative general secretion pathway protein H	General secretion pathway protein H	Type II secretion protein	Putative general secretion pathway protein H	hypothetical protein	Putative general secretion pathway protein H	general secretion pathway protein H identified by similarity to SP:P31735; match to protein family HMM TIGR01708; match to protein family HMM TIGR02532	general secretion pathway protein H TIGRFAM: general secretion pathway protein H KEGG: son:SO0170 general secretion pathway protein H	General secretion pathway protein H	general secretion pathway protein H TIGRFAM: general secretion pathway protein H; Prepilin-type cleavage/methylation-like KEGG: son:SO0170 general secretion pathway protein H	general secretion pathway outer membrane protein H precursor	general secretion pathway protein H TIGRFAM: general secretion pathway protein H KEGG: son:SO0170 general secretion pathway protein H	putative general secretion pathway protein H precursor	General secretion pathway protein H precursor	General secretion pathway protein H precursor	General secretion pathway protein H precursor	TIGRFAM: general secretion pathway protein H KEGG: son:SO_0170 general secretion pathway protein H general secretion pathway protein H	KEGG: slo:Shew_3615 general secretion pathway protein H general secretion pathway protein H	Pullulanase H protein	General secretion pathway protein H	General secretion pathway protein H	Predicted general secretory pathway component, cryptic	General secretion pathway protein H	General secretion pathway protein H precursor	General secretion pathway protein H precursor	Putative uncharacterized protein	Pullulanase secretion protein PulH	General secretion pathway protein H	
ECOLI03201	Probable general secretion pathway protein I	Probable general secretion pathway protein I	General secretion pathway protein I	General secretion pathway protein I	General secretion pathway protein I	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative general secretion pathway protein I [precursor]	Probable general secretion pathway protein I	General secretion pathway protein I precursor	General secretion pathway protein I precursor	General secretion pathway protein I precursor	General secretion pathway protein I	Probable general secretion pathway protein I	general secretion pathway protein I TIGRFAM: general secretion pathway protein I PFAM: type II secretion system protein I/J; methylation site containing protein KEGG: son:SO0171 general secretion pathway protein I	general secretion pathway protein I	general secretion pathway protein I TIGRFAM: general secretion pathway protein I PFAM: type II secretion system protein I/J KEGG: shm:Shewmr7_0156 general secretion pathway protein I	General secretion pathway protein I precursor	putative general secretion pathway protein I precursor	general secretion pathway protein I KEGG: son:SO0171 general secretion pathway protein I	General secretion pathway protein I precursor	General secretion pathway protein I precursor	General secretion pathway protein I precursor	General secretion pathway protein I precursor	TIGRFAM: general secretion pathway protein I PFAM: type II secretion system protein I/J KEGG: shm:Shewmr7_0156 general secretion pathway protein I general secretion pathway protein I	General secretion pathway protein I	General secretory pathway component, cryptic	General secretion pathway protein I	General secretion pathway protein I precursor	General secretion pathway protein I	Putative uncharacterized protein	
ECOLI03202	Probable general secretion pathway protein J	General secretion pathway protein J	General secretion pathway protein J	Probable general secretion pathway protein J	General secretion pathway protein J	General secretion pathway protein J	Type II secretion system protein J	Type II secretory pathway, component PulJ	type II secretion system protein J	identified by similarity to SP:Q00517; match to protein family HMM PF02501; match to protein family HMM PF07963; match to protein family HMM TIGR01711; match to protein family HMM TIGR02532 general secretion pathway protein J	type II secretion system protein J	Probable general secretion pathway protein J	Probable general secretion pathway protein J	general secretion pathway protein J TIGRFAM: general secretion pathway protein J KEGG: she:Shewmr4_0162 general secretion pathway protein J	Putative general secretion pathway protein J	general secretion pathway protein J	putative general secretion pathway protein J precursor	General secretion pathway protein J precursor	Exported type II protein secretion system protein J	Predicted general secretory pathway component, cryptic	General secretion pathway protein J	General secretion pathway protein J precursor	General secretion pathway protein J	Type II secretion system protein J	General secretion pathway protein J	Putative general secretory pathway component, cryptic	Putative general secretory pathway component, cryptic	Type II secretion pathway protein J	GspJ protein	
ECOLI03203	Probable general secretion pathway protein K	Type II secretion system protein K	General secretion pathway protein K	General secretion pathway protein K	Probable general secretion pathway protein K	General secretion pathway protein K	General secretion pathway protein K	Type II secretion protein	Type II secretion system protein K	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter general secretion pathway protein K	Type II secretion pathway protein XcpX	Type II secretory pathway, component PulK	type II secretion system protein K	identified by similarity to GP:4139244; match to protein family HMM PF03934 general secretion pathway protein K	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative general secretion pathway protein	Code: U; COG: COG3156 putative type II secretion protein	General secretion pathway protein K	General secretion pathway protein K	General secretion pathway protein K	General secretion pathway protein K	Type II secretory pathway, component PulK COG3156	type II secretion system protein K	Probable general secretion pathway protein K	General secretion pathway protein K precursor	General secretion pathway protein K precursor	general secretion pathway protein K	General secretion pathway protein K	General secretion pathway protein K	General secretion pathway protein K precursor	
ECOLI03204	Probable general secretion pathway protein L	Probable general secretion pathway protein L	General secretion pathway protein L	General secretion pathway protein L	General secretion pathway protein L	General secretion pathway protein L	Type II secretion protein	general secretion pathway protein L	identified by match to protein family HMM PF05134; match to protein family HMM TIGR01709 general secretion pathway protein L	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter putative general secretion pathway protein L	Probable general secretion pathway protein L	General secretion pathway protein L	Probable general secretion pathway protein L	general secretion pathway protein L TIGRFAM: general secretion pathway protein L PFAM: General secretion pathway L KEGG: shm:Shewmr7_0159 general secretion pathway protein L	Putative general secretion pathway protein L	general secretion pathway protein L TIGRFAM: general secretion pathway protein L PFAM: General secretion pathway L KEGG: son:SO0174 general secretion pathway protein L	General secretion pathway protein L	putative general secretion pathway protein L	General secretion pathway protein L	General secretion pathway protein L	TIGRFAM: general secretion pathway protein L PFAM: General secretion pathway L KEGG: shn:Shewana3_0159 general secretion pathway protein L general secretion pathway protein L	Pullulanase L protein	General secretory pathway component, cryptic	General secretion pathway protein L	General secretion pathway protein L	General secretion pathway protein L	General secretion pathway protein L	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03205	Putative general secretion pathway protein M	Putative general secretion pathway protein M	Putative general secretion pathway protein M	putative general secretion pathway protein M	General secretory pathway component, cryptic	General secretion pathway protein M	General secretion pathway M protein precursor	General secretory pathway component, cryptic	GspM protein	General secretory pathway component, cryptic	General secretion pathway M protein	Putative T2SS protein M	
ECOLI03206	Type 4 prepilin-like proteins leader peptide- processing enzyme	Type 4 prepilin-like proteins leader peptide processing enzyme	type IV prepilin leader peptidase family protein	peptidase A24A, prepilin type IV	Type 4 prepilin-like proteins leader peptide processing enzyme	Type 4 prepilin-like proteins leader peptide processing enzyme	type 4 prepilin-like proteins leader peptide processing enzyme	Putative type 4 prepilin-like protein specific leader peptidase	Peptidase A24A, prepilin type IV	Peptidase A24A, prepilin type IV	Bifunctional prepilin leader peptidase and methylase	Type 4 prepilin peptidase	Peptidase A24A prepilin type IV precursor	A24A-like peptidase	Peptidase A24A domain protein	Peptidase A24A prepilin type IV	Putative type IV prepilin-like leader peptidase	Peptidase A24A prepilin type IV	Peptidase A24A prepilin type IV	Bifunctional prepilin leader peptidase and methylase	GspO protein	Bifunctional prepilin leader peptidase, methylase	HopD identified by Glimmer3; putative	Bifunctional prepilin leader peptidase, methylase	Putative T2SS leader peptidase GspO	
ECOLI03207	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin B	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	putative bacterioferritin	Bacterioferritin	similar to SP:P22759; identified by sequence similarity; putative bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin	Bacterioferritin subunit 2	Bacterioferritin	PMID: 2276500 PMID: 1904771 PMID: 8695634 PMID: 8526846 PMID: 7664064 PMID: 7559480 best DB hits: BLAST: swissprot:Q59738; BFR_RHOCA BACTERIOFERRITIN (BFR) ----- embl:; E=9e-22 swissprot:P49944; BFR_BRUME BACTERIOFERRITIN (BFR) ----- pir:; E=4e-21 pir:H82810; bacterioferritin XF0395 [imported] - Xylella fastidiosa; E=7e-19 COG: XF0395; COG2193 Bacterioferritin (cytochrome b1); E=7e-20 BS_yhjR; COG1633 Uncharacterized ACR; E=0.004 AF0832; COG1592 Rubrerythrin; E=0.009 PFAM: PF01334; Bacterioferritin; E=9.1e-39 bacterioferritin	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE BACTERIOFERRITIN (BFR) (CYTOCHROME B-1) (CYTOCHROME B-557) PROTEIN	Bacterioferritin	Bacterioferritin	
ECOLI03208	Bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	putative bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	Putative uncharacterized protein yheA	Bacterioferritin-associated ferredoxin	Residues 1 to 64 of 64 are 100 pct identical to residues 1 to 64 of a 64 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289885.1 orf, conserved hypothetical protein	Putative bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	IPR007419: BFD-like [2Fe-2S]-binding domain regulatory or redox component complexing with Bfr, in iron storage and mobility	similar to Salmonella typhi Ty2 bacterioferritin-associated ferredoxin bacterioferritin-associated ferredoxin	Putative bacterioferritin-associated ferredoxin	Bfd Bacterioferritin-associated ferredoxin	Bacterioferritin-associated ferredoxin	identified by similarity to SP:P13655; match to protein family HMM PF04324 bacterioferritin-associated ferredoxin	identified by match to protein family HMM PF04324 bacterioferritin-associated ferredoxin	identified by match to protein family HMM PF04324 bacterioferritin-associated ferredoxin	BFD-like [2Fe-2S]-binding region	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2661540, 8639572, 8954950 putative Bacterioferritin-associated ferredoxin	bacterioferritin-associated ferredoxin	BFD-like (2Fe-2S)-binding region	Bacterioferritin-associated ferredoxin COG2906	Code: P; COG: COG2906 bacterioferritin-associated ferredoxin	
ECOLI03209	Probable bifunctional chitinase/lysozyme	Probable bifunctional chitinase/lysozyme	Probable bifunctional chitinase/lysozyme	putative bifunctional chitinase/lysozyme	Bifunctional chitinase/lysozyme	Lysozyme precursor	Periplasmic endochitinase	Periplasmic endochitinase	ChiA protein	Periplasmic endochitinase	Lysozyme	Putative polysaccharide degrading enzyme	
ECOLI03831	Elongation factor Tu	elongation factor Tu, mitochondrial precursor;	Mitochondrial translation elongation factor Tu; comprises both GTPase and guanine nucleotide exchange factor activities, while these activities are found in separate proteins in S. pombe and humans.  [Source:SGD;Acc:S000005713]	highly similar to sp|P02992 Saccharomyces cerevisiae YOR187w TUF1 translation elongation factor TU, mitochondrial, hypothetical start	Elongation factor Tu	Elongation factor Tu, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC9B6.04c]	highly similar to sp|P02992 Saccharomyces cerevisiae YOR187w TUF1 translation elongation factor TU, mitochondrial, start by similarity	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	elongation factor tu, putative	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	DEHA2D08954p;highly similar to uniprot|P02992 Saccharomyces cerevisiae YOR187W TUF1 Mitochondrial translation elongation factor Tu;	similar to GB:Y00978, GB:J03866, GB:X13822, SP:P10515, PID:30524, PID:35360,  and PID:619444; identified by sequence similarity; putative translation elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu 1	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu-B	
ECOLI03210	Elongation factor G	Elongation factor G	Elongation factor G 2	Elongation factor G	Elongation factor G 2	Elongation factor G	Elongation factor G	Elongation factor G	identified by match to PFAM protein family HMM PF03144 translation elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G 1	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	Elongation factor G	
ECOLI03211	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7P	identified by match to TIGR protein family HMM TIGR01028 ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7P	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	30S ribosomal protein S7	
ECOLI03212	30S ribosomal protein S12	Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins.  [Source:SGD;Acc:S000005319]	highly similar to sp|P53732 Saccharomyces cerevisiae Putative mitochondrial 40S ribosomal protein YNR036C, start by similarity	30S ribosomal protein S12	Probable 40S ribosomal protein S12, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC4F8.06]	similar to sp|P53732 Saccharomyces cerevisiae YNR036c singleton, hypothetical start	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	identified by match to TIGR protein family HMM TIGR00982 ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	30S ribosomal protein S12	
ECOLI03213	Protein tusB	Protein tusB	hypothetical protein	Protein tusB	Protein tusB	Protein tusB	Putative uncharacterized protein VP2774	Protein tusB	Protein tusB	Residues 1 to 95 of 95 are 97 pct identical to residues 1 to 95 of a 95 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289890.1 orf, conserved hypothetical protein	Protein tusB	Protein tusB	IPR007215: DsrH like protein putative oxidation of intracellular sulfur	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Protein tusB	Protein tusB	Protein tusB	Code: P; COG: COG2168 conserved hypothetical protein	DsrH protein	conserved hypothetical protein	DsrH protein	uncharacterized conserved protein involved in oxidation of intracellular sulfur COG2168	Code: P; COG: COG2168; orf conserved hypothetical protein	Protein tusB	Hypothetical protein	Protein tusB	DsrH family protein PFAM: DsrH family protein KEGG: cte:CT0857 DsrH protein	intracellular sulfur oxidation protein DsrH identified by match to protein family HMM PF04077	Hypothetical protein	
ECOLI03214	Protein tusC	DsrF protein	Protein tusC homolog	Protein tusC homolog	Protein tusC homolog	Protein tusC	conserved hypothetical protein	Protein tusC	Protein tusC homolog	Putative uncharacterized protein	Protein tusC	Protein tusC	DsrF family protein	Protein tusC homolog	Protein tusC	Protein tusC	Protein tusC homolog	Residues 1 to 119 of 119 are 98 pct identical to residues 1 to 119 of a 119 aa protein from Escherichia coli K12 ref: NP_417803.1 orf, conserved hypothetical protein	Protein tusC	Protein tusC	IPR003787: DsrE-like protein putative oxidation of intracellular sulfur	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Protein tusC	intracellular sulfur oxidation protein dsrF	Similar to: HI0576.1, YHEM_HAEIN uncharacterized conserved protein involved in oxidation of intracellular sulfur	Uncharacterized protein involved in the oxidation of intracellular sulfur DsrF protein	Putative uncharacterized protein	Protein tusC	Protein tusC	
ECOLI03215	Sulfurtransferase tusD	DsrE protein	Sulfurtransferase tusD homolog	Sulfurtransferase tusD homolog	Sulfurtransferase tusD homolog	Sulfurtransferase tusD	conserved hypothetical protein	Sulfurtransferase tusD	Sulfurtransferase tusD homolog	DsrE-related protein	Sulfurtransferase tusD	Sulfurtransferase tusD	DsrE family protein	Sulfurtransferase tusD homolog	Sulfurtransferase tusD	Sulfurtransferase tusD	Sulfurtransferase tusD homolog	Residues 1 to 128 of 128 are 96 pct identical to residues 1 to 128 of a 128 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289892.1 orf, conserved hypothetical protein	Sulfurtransferase tusD	Sulfurtransferase tusD	IPR003787: DsrE-like protein putative ACR involved in intracellular sulfur reduction	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Sulfurtransferase tusD	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative intracellular sulfur oxidation protein (DsrE-like)	Intracellular sulfur oxidation protein DsrE	DsrE protein homolog	Similar to: HI0576, Y576_HAEIN uncharacterized conserved protein involved in intracellular sulfur reduction	Uncharacterized ACR involved in intracellular sulfur reduction DsrE protein	DsrE protein	
ECOLI03216	Uncharacterized protein yheO	Uncharacterized protein HI0575	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV3036	Putative uncharacterized protein yheO	conserved hypothetical protein	Hypothetical protein yheO	Putative uncharacterized protein	Putative DNA-binding protein	Putative uncharacterized protein VP2777	Putative uncharacterized protein yheO	Uncharacterized protein conserved in bacteria	Residues 1 to 244 of 244 are 99 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli K12 ref: NP_417805.1 orf, conserved hypothetical protein	Putative DNA-binding protein	Similar to unknown protein YheO of Escherichia coli	Hypothetical protein yheO	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative DNA-binding protein	MukF protein	Similar to: HI0575, YHEO_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Putative regulator	conserved hypothetical protein	Code: S; COG: COG2964 conserved hypothetical protein	Code: S; COG: COG2964 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG2964; orf conserved hypothetical protein	Putative uncharacterized protein	
ECOLI03217	FKBP-type peptidyl-prolyl cis-trans isomerase fkpA	identified by match to PFAM protein family HMM PF01346 peptidyl-prolyl cis-trans isomerase Mip	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	putative FKBP-type peptidyl-prolyl cis-trans isomerase 1	FKBP-type peptidyl-prolyl cis-trans isomerase fkpA precursor	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase fkpA	Peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase fkpA	FKBP-type peptidyl-prolyl cis-trans isomerase fkpA	Peptidyl-prolyl cis-trans isomerase	Residues 1 to 270 of 270 are 99 pct identical to residues 1 to 270 of a 270 aa protein from Escherichia coli O157:H7 ref: NP_312225.1 FKBP-type peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase Mip	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	IPR000774: FKBP-type peptidyl-prolyl isomerase, N-terminal; IPR001179: Peptidylprolyl isomerase, FKBP-type FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)	similar to Salmonella typhi CT18 FKBP-type peptidyl-prolyl isomerase FKBP-type peptidyl-prolyl isomerase	Similar to Chlamydophila caviae Mip protein SWALL:Q46176 (EMBL:L39892) (255 aa) fasta scores: E(): 3e-77, 87.05% id in 255 aa, and to Chlamydia pneumoniae peptidyl-prolyl cis-trans isomerase Mip precursor or cpn0661 or cp0086 SWALL:MIP_CHLPN (SWALL:Q9Z7P3) (258 aa) fasta scores: E(): 2.6e-63, 72.58% id in 248 aa putative macrophage infectivity potentiator lipoprotein	Peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA	Similar to Escherichia coli, and Shigella flexneri Fkbp-type 22 kDa peptidyl-prolyl cis-trans isomerase FklB or B4207 or SF4279 or s4544 SWALL:FKBB_ECOLI (SWALL:P39311) (205 aa) fasta scores: E(): 2.1e-22, 43.66% id in 213 aa, and to Bacteroides thetaiotaomicron peptidylprolyl isomerase BT2977 SWALL:Q8A3H7 (EMBL:AE016938) (291 aa) fasta scores: E(): 1.5e-65, 70.75% id in 277 aa, and to Shewanella oneidensis FkbP-type peptidyl-prolyl cis-trans isomerase FkpA or so1065 SWALL:Q8EHY9 (EMBL:AE015551) (255 aa) fasta scores: E(): 7.6e-24, 42.79% id in 229 aa.  Putative tandem duplication of the upstream CDS but extended at the N-terminus. putative isomerase	FKBP-type peptidyl-prolyl cis-trans isomerases 1 FkpA protein	FKBP-type peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase fkpA	
ECOLI03218	Protein slyX	Protein slyX homolog	Protein slyX homolog	Protein slyX homolog	Protein slyX	putative slyX protein (slyX)	Protein slyX	Protein slyX homolog	Protein slyX homolog	Protein slyX	Protein slyX homolog	Protein slyX	Protein slyX homolog	Residues 1 to 72 of 72 are 98 pct identical to residues 1 to 72 of a 72 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289895.1 host factor for lysis of phiX174 infection	Protein slyX	Protein slyX	IPR007236: SlyX putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Protein slyX homolog	Protein slyX	SlyX protein	Similar to: HI0573, SLYX_HAEIN SlyX	Uncharacterized BCR SlyX protein	Uncharacterized conserved protein SlyX	Protein slyX	conserved hypothetical protein	identified by similarity to SP:P30857; match to protein family HMM PF04102 slyX protein	SlyX protein	Code: S; COG: COG2900 host factor for lysis of phiX174 infection	
ECOLI03219	FKBP-type peptidyl-prolyl cis-trans isomerase slyD	Peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase slyD	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	putative peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase slyD	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase slyD	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase slyD	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase slyD	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	
ECOLI03220	Uncharacterized protein yheV	Putative uncharacterized protein yheV	hypothetical protein	Hypothetical protein yheV	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein VP2784	Uncharacterized protein yheV	Predicted nucleic-acid-binding protein	Residues 1 to 66 of 66 are 98 pct identical to residues 1 to 66 of a 66 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289897.1 orf, conserved hypothetical protein	Predicted nucleic-acid-binding protein containing a Zn-ribbon domain	Similar to unknown protein. Putative secreted protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Predicted nucleic-acid-binding protein containing a Zn-ribbon domain	Putative cytoplasmic protein	identified by similarity to OMNI:NTL01YP0178; match to protein family HMM TIGR02443 conserved hypothetical protein	Code: R; COG: COG3529 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG3529; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein	Hypothetical protein precursor	Hypothetical protein	Hypothetical protein	
ECOLI03221	Glutathione-regulated potassium-efflux system protein kefB	Kef-type K+ transport system, membrane component	Glutathione-regulated potassium-efflux system protein	Glutathione-regulated potassium-efflux system protein kefB	Na+/H+ antiporter	putative glutathione-regulated potassium-effluxsystem protein KefB	Glutathione-regulated potassium-efflux system protein kefB	Glutathione-regulated potassium-efflux system protein KefB	Glutathione-regulated potassium-efflux system protein kefB	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLUTATHIONE-REGULATED POTASSIUM-EFFLUX SYSTEM TRANSMEMBRANE PROTEIN	Glutathione-regulated potassium-efflux system protein KefB	Glutathione-regulated potassium-efflux system protein kefB	Kef-type K+ transport system, predicted NAD- binding component	Residues 1 to 557 of 557 are 97 pct identical to residues 32 to 601 of a 601 aa protein from Escherichia coli K12 ref: NP_417809.1 K+ efflux; NEM-activable K+-H+ antiporter	Glutathione-regulated potassium-efflux system protein kefB	IPR003148: TrkA-N; IPR004771: Potassium efflux system protein; IPR006036: TrkA potassium uptake protein;IPR006153: Sodium/hydrogen exchanger CPA2 family, K+:H+ antiporter	similar to Salmonella typhi CT18 glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter) glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter)	Glutathione-regulated potassium-efflux system protein kefB	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter glutathione-regulated potassium-efflux system protein (K(+)/H(+) antiporter)	Similar to Lactococcus lactis Na+/H+ antiporter homolog Nah SWALL:Q48731 (EMBL:X73329) (379 aa) fasta scores: E(): 3.5e-17, 24.54% id in 387 aa, and to Bacteroides thetaiotaomicron Na+/H+ anti-porter BT3638 SWALL:AAO78743 (EMBL:AE016941) (711 aa) fasta scores: E(): 0, 89.59% id in 711 aa, and to Chlorobium tepidum Na+/H+ antiporter, putative CT1144 SWALL:Q8KDB0 (EMBL:AE012875) (784 aa) fasta scores: E(): 7.1e-95, 37.86% id in 721 aa putative Na+/H+ antiporter	Potassium efflux transporter, putative	Glutathione-regulated potassium-efflux system protein kefB	Potassium efflux system protein	Code: P; COG: COG0475 K+ efflux NEM-activable K+/H+ antiporter	K+ efflux; Code: P; COG: COG0475 NEM-activable K+/H+ antiporter	putative potassium-efflux system protein identified by match to protein family HMM PF00999	potassium-hydrogen antiporter	K+ efflux; Code: P; COG: COG1226 NEM-activable K+/H+ antiporter	pseudo	
ECOLI03222	Glutathione-regulated potassium-efflux system ancillary protein kefG	NADP(H) oxidoreductase	NADP(H) oxidoreductase	Putative NADPH-quinone reductase	Glutathione-regulated potassium-efflux system ancillary protein kefG	putative NAD(P)H oxidoreductase	Glutathione-regulated potassium-efflux system ancillary protein kefG	NAD(P)H oxidoreductase, putative	Glutathione-regulated potassium-efflux system ancillary protein kefG	NADP(H) OXIDOREDUCTASE	probable NADP(H) oxidoreductase	NADPH oxidoreductase	Putative NAD(P)H oxidoreductase	Glutathione-regulated potassium-efflux system ancillary protein kefG	Putative NADPH-quinone reductase	Residues 1 to 184 of 184 are 98 pct identical to residues 1 to 184 of a 184 aa protein from Escherichia coli O157:H7 ref: NP_312229.1 putative NAD(P)H oxidoreductase	Glutathione-regulated potassium-efflux system ancillary protein kefG	Probable NAD(P)H2 dehydrogenase	IPR003680: NAD(P)H dehydrogenase (quinone) putative NAD(P)H oxidoreductase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	Glutathione-regulated potassium-efflux system ancillary protein kefG	modulator of glutathione-dependent potassium efflux system	Glutathione-regulated potassium-efflux system ancillary protein kefG	Code: R; COG: COG2249 putative NAD(P)H oxidoreductase	Putative NADPH-quinone oxidoreductase	Code: R; COG: COG2249 putative NAD(P)H oxidoreductase	Code: R; COG: COG2249 putative NAD(P)H oxidoreductase	Glutathione-regulated potassium-efflux system ancillary protein kefG	Hypothetical protein	
ECOLI03223	Uncharacterized ABC transporter ATP-binding protein yheS	Uncharacterized ABC transporter ATP-binding protein HI0658	Putative uncharacterized protein	ABC-type transport system, ATPase component	Probable ABC transporter ATP-binding protein	putative ABC transporter, ATP-binding protein	Hypothetical ABC transporter ATP-binding protein yheS	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Uncharacterized ABC transporter ATP-binding protein yheS	ATPase component of ABC transporter with duplicated ATPase domains	Residues 1 to 637 of 637 are 99 pct identical to residues 1 to 637 of a 637 aa protein from Escherichia coli O157:H7 ref: NP_312230.1 putative ATP-binding component of a transport system	ATPase components of ABC transporters with duplicated ATPase domains	ATP-binding protein YheS	Similar to ABC transporter, ATP-binding protein hypothetical protein	Similar to ABC transporter, ATP-binding protein hypothetical protein	Probable ABC transporter ATP-binding protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase putative ATPase component of ABC transporter with duplicated ATPase domain	similar to Salmonella typhi CT18 probable ABC transporter ATP-binding protein probable ABC transporter ATP-binding protein	Putative ABC transporter with fused ATP-binding domains	ABC transporter, ATP-binding family protein	Similar to: HI0658, YHES_HAEIN probable ABC transporter, ATP-binding protein	ATPase components of ABC transporters with duplicated ATPase domains Uup protein	ABC transporter, ATP-binding protein, putative	ATPase component of ABC transporters with duplicated ATPase domains	Putative ATPase component of ABC transporter	
ECOLI03224	Putative esterase yheT	similar to sp|Q03649 Saccharomyces cerevisiae YMR210w, start by similarity	Putative uncharacterized protein	similarity to HYPOTHETICAL PROTEIN YM60_yeast;07_0900, similarity to HYPOTHETICAL PROTEINS (UPF 0017 family) YM60_yeast and HPS1_HUMAN, gene found by Glimmer;	DEHA2G12430p;similar to uniprot|Q02891 Saccharomyces cerevisiae YPL095c;	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV3047	Predicted hydrolase or acyltransferase, alpha/beta hydrolase superfamily	Putative uncharacterized protein	Putative hydrolase	Putative hypothetical protein yheT	Esterase/lipase/thioesterase family protein	Hypothetical protein yheT	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative hydrolase	PMID: 9278503 best DB hits: BLAST: pir:F82056; conserved hypothetical protein VC2610 [imported] -; E=3e-26 pir:F83600; conserved hypothetical protein PA0368 [imported] -; E=5e-24 swissprot:P45524; YHET_ECOLI HYPOTHETICAL 38.5 KD PROTEIN IN; E=2e-23 COG: VC2610; COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; E=3e-27 YMR210w; COG0429 Predicted hydrolase of the alpha/beta-hydrolase; E=1e-23 PFAM: PF00561; alpha/beta hydrolase fold; E=3.9e-06 conserved hypothetical protein-putative hydrolase of the alpha/beta-hydrolase fold family	Hydrolase, alpha/beta fold family	Putative uncharacterized protein	hypothetical protein	Hydrolase, alpha/beta fold family	Putative uncharacterized protein VP2790	Putative uncharacterized protein yheT	
ECOLI03225	UPF0270 protein yheU	UPF0270 protein PM1156	UPF0270 protein PA3463	UPF0270 protein VV3048	UPF0270 protein yheU	Hypothetical protein yheU	Putative uncharacterized protein yheU	UPF0270 protein yheU	UPF0270 protein VC_2612	UPF0270 protein ECA4061	UPF0270 protein PSPTO_1630	UPF0270 protein VP2791	UPF0270 protein yheU	UPF0270 protein VV1_1320	Residues 1 to 72 of 72 are 100 pct identical to residues 1 to 72 of a 72 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289902.1 orf, conserved hypothetical protein	UPF0270 protein YPO0179/y3960/YP_0178	UPF0270 protein plu0398	conserved hypothetical protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0270 protein YPTB3725	enolase	Similar to: Y956_HAEIN hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved protein	UPF0270 protein yheU	identified by similarity to OMNI:NTL01YP0167; match to protein family HMM PF06794 conserved hypothetical protein	conserved hypothetical protein	identified by match to protein family HMM PF06794 conserved hypothetical protein	identified by similarity to SP:Q88M28; match to protein family HMM PF06794 conserved hypothetical protein	
ECOLI03226	Probable phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Putative phosphoribulokinase	Probable phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Product confidence : putative Gene name confidence : putative putative phosphoribulokinase protein	Phosphoribulokinase	Probable phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Residues 1 to 289 of 289 are 100 pct identical to residues 1 to 289 of a 289 aa protein from Escherichia coli K12 ref: NP_417814.1 probable phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	IPR006082: Phosphoribulokinase; IPR006083: Phosphoribulokinase/uridine kinase putative phosphoribulokinase	similar to Salmonella typhi CT18 phosphoribulokinase phosphoribulokinase	Phosphoribulokinase	phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	Phosphoribulokinase	identified by similarity to SP:P37307; match to protein family HMM PF00485 phosphoribulokinase	
ECOLI03227	Protein yhfA	Putative uncharacterized protein TVG1507408	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein PF1388	OsmC-like protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted redox protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhfA	Lmo1704 protein	Putative OsmC-like protein	conserved hypothetical protein	Putative uncharacterized protein yhfA	Protein yhfA	Putative uncharacterized protein VCA0838	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical CONSERVED HYPOTHETICAL PROTEIN	OsmC/Ohr family protein	Putative uncharacterized protein	hypothetical conserved protein	OsmC/Ohr family protein	Putative uncharacterized protein VPA0208	
ECOLI03228	Catabolite gene activator	Transcriptional regulator, Crp/Fnr family	CAMP-regulatory protein	Global nitrogen regulator	Catabolite activation-like protein	Catabolite gene activator	Putative transcriptional regulator with cyclic nucleotide-binding domain	Global nitrogen regulatory protein, CRP family of transcriptional regulators	Catabolite gene activator	Cyclic AMP receptor-like protein	Transcriptional regulator	CAMP-binding protein	Probable cyclic nucleotide binding protein	Transcription regulator, crp family	Cyclic AMP receptor protein,catabolite gene activator	Global nitrogen regulator	cAMP-binding domains-Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	putative cyclic AMP receptor protein	Catabolite gene activator	Cyclic AMP receptor protein	Catabolite gene activator	Cyclic AMP receptor protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Catabolite gene activator Crp	PUTATIVE TRANSCRIPTIONAL REGULATOR	Transcriptional regulator, Crp family	nitrogen-responsive regulatory protein	Putative transcriptional regulator	Putative transcriptional regulator	
ECOLI03229	Uncharacterized protein yhfK	Putative integral membrane protein	pseudo	Hypothetical protein yhfK	Putative uncharacterized protein yhfK	SC9A4.21, possible integral membrane protein, len: 645 aa; similar to TR:O32225 (EMBL:Z99121) Bacillus subtilis YvaC protein, 631 aa; fasta scores: opt: 402 z-score: 435.7 E(): 8.4e-17; 23.8% identity in 627 aa overlap. Contains possible hydrophobic membrane spanning regions putative integral membrane protein	Residues 1 to 700 of 700 are 99 pct identical to residues 1 to 700 of a 700 aa protein YHFK_ECOLI sp: P45537 orf, conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein	membrane protein, putative	putative inner membrane protein	similar to Salmonella typhimurium putative inner membrane protein putative inner membrane protein	Putative uncharacterized protein	conserved hypothetical protein	Possible Putative Efflux Transporter (PET) family protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2588 putative membrane protein	conserved hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	similar to unknown protein	Poor database matches. Weakly similar to Bacillus subtilis hypothetical protein YvaC TR:O32225 (EMBL:Z99121) (631 aa) fasta scores: E(): 1.6e-27, 25.08% id in 614 aa, and to Escherichia coli hypothetical protein YhfK SW:YHFK_ECOLI (P45537) (696 aa) fasta scores: E(): 2e-07, 24.67% id in 620 aa putative membrane protein	Code: S; COG: COG1289 conserved hypothetical protein	identified by match to protein family HMM PF05976 membrane protein, putative	putative membrane protein identified by match to protein family HMM PF05976	probable membrane protein	Code: S; COG: COG1289; orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Membrane protein-like protein	
ECOLI03230	Acetylornithine/succinyldiaminopimelate aminotransferase	Acetylornithine aminotransferase, catalyzes the fourth step in the biosynthesis of the arginine precursor ornithine. [Source:SGD;Acc:S000005500]	Acetylornithine aminotransferase	Acetylornithine aminotransferase	Acetylornithine/acetyl-lysine aminotransferase	Acetylornithine aminotransferase	Acetylornithine aminotransferase	Aminotransferase (Subgroup II) similar to Acetylornithine aminotransferase	Acetylornithine aminotransferase	Acetylornithine aminotransferase	Succinylornithine transaminase/acetylornithine aminotransferase	Acetylornithine/succinyldiaminopimelate aminotransferase	Probable acetylornithine aminotransferase	Acetylornithine aminotransferase	Acetylornithine aminotransferase	putative acetylornithine aminotransferase	Acetylornithine/succinyldiaminopimelate aminotransferase	Acetylornithine aminotransferase	Acetylornithine aminotransferase	Acetylornithine aminotransferase	Acetylornithine/succinyldiaminopimelate aminotransferase	N-acetylornithine aminotransferase	Acetylornithine aminotransferase 1	Acetylornithine aminotransferase	Acetylornithine aminotransferase	Acetylornithine/succinyldiaminopimelate aminotransferase	Putative acetylornithine aminotransferase	Acetylornithine aminotransferase	Acetylornithine/succinyldiaminopimelate aminotransferase	
ECOLI03231	Para-aminobenzoate synthase glutamine amidotransferase component II	Anthranilate synthase component II	Anthranilate synthase component II	Anthranilate synthase component II	Anthranilate synthase component II	Anthranilate synthase component II	Anthranilate synthase component II	Anthranilate synthase component II	Anthranilate synthase component II	Para-aminobenzoate/anthranilate synthase glutamine amidotransferase	Putative p-aminobenzoate synthase glutamine amidotransferase	Para-aminobenzoate synthase glutamine amidotransferase component II	Anthranilate synthase component II	Para-aminobenzoate synthase component II	Probable anthranilate synthase component II	Anthranilate synthase component II	Anthranilate synthase component II	Para-aminobenzoate synthase component II	Probable para-aminobenzoate synthase component II	Glutamine amidotransferase, class I	Para-aminobenzoate synthase glutamine amidotransferase component II	Anthranilate synthase component II	Para-aminobenzoate synthase glutamine amidotransferase component II	Para-aminobenzoate synthase glutamine amidotransferase, component II	Anthranilate synthase component II	Anthranilate synthase component II/para- aminobenzoate synthase glutamine amidotransferase component II	Para-aminobenzoate synthase, glutamine amidotransferase component II	Anthranilate synthase component II	Para-aminobenzoate synthase, glutamine amidotransferase component	
ECOLI03232	Cell filamentation protein fic	Probable adenosine monophosphate-protein transferase HI0977	Cell filamentation protein Fic	hypothetical cell filamentation protein	Cell filamentation protein fic	Cell filamentation protein Fic	Cell filamentation protein	Cell filamentation protein	Fic	Induced in stationary phase, recognized by rpoS, affects cell division	Putative uncharacterized protein	Putative cell filamentation protein	Residues 1 to 200 of 200 are 99 pct identical to residues 1 to 200 of a 200 aa protein from Escherichia coli K12 ref: NP_417820.1 induced in stationary phase, recognized by rpoS, affects cell division	Cell filamentation protein Fic	Cell filamentation protein Fic	Cell filamentation protein	Cell filamentation protein, putative	Mb3665c, fic, len: 211 aa. Equivalent to Rv3641c, len: 211 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 211 aa overlap). Possible fic, cell filamentation protein, similar to others e.g.  Q9PCU8|XF1657 CELL FILAMENTATION PROTEIN from Xylella fastidiosa (203 aa), FASTA scores: opt: 324, E(): 2.2e-14, (32.8% identity in 189 aa overlap); P20605|FIC_ECOLI|B3361 from Escherichia coli strain K12 (200 aa), FASTA scores: opt: 323, E(): 2.5e-14, (31.0% identity in 187 aa overlap); P20751|FIC_SALTY from Salmonella typhimurium (200 aa), FASTA scores: opt: 322, E(): 2.9e-14, (32.65% identity in 193 aa overlap); etc. POSSIBLE CELL FILAMENTATION PROTEIN FIC	IPR003812: Filamentation induced by cAMP protein Fic putative cell filamentation protein, stationary phase induced gene, affects cell division	similar to Salmonella typhi CT18 cell filamentation protein Fic cell filamentation protein Fic	Probable adenosine monophosphate-protein transferase fic	identified by match to protein family HMM PF02661 cell filamentation protein Fic	Filamentation induced by cAMP protein Fic	induced in stationary phase, recognized by rpoS, affects cell division; Code: D; COG: COG2184 Fic	induced in stationary phase, recognized by rpoS, affects cell division; Code: D; COG: COG2184 Fic	induced in stationary phase, recognized by rpoS, affects cell division; Code: D; COG: COG2184 Fic	pseudo putative cell filamentation protein, pseudogene submitted without /pseudo similarity:fasta; with=UniProt:FIC_ECOLI (EMBL:CEK131F3R); Escherichia coli.; fic; Cell filamentation protein fic.; length=200; id 37.324; 142 aa overlap; query 8-145; subject 10-148 similarity:fasta; with=UniProt:Y4LH_RHISN (EMBL:RSAE83); Rhizobium sp. (strain NGR234).; Hypothetical 22.4 kDa protein y4lH.; length=192; id 61.806; 144 aa overlap; query 3-145; subject 4-147	Cell filamentation protein Fic	Filamentation induced by cAMP protein Fic	
ECOLI03233	Uncharacterized protein yhfG	Hypothetical protein yhfG	Uncharacterized protein yhfG	Residues 1 to 55 of 55 are 96 pct identical to residues 1 to 55 of a 55 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289910.1 orf, conserved hypothetical protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Uncharacterized protein yhfG	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhfG	conserved hypothetical protein	Putative uncharacterized protein yhfG	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhfG	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhfG	Putative uncharacterized protein	Putative uncharacterized protein yhfG	
ECOLI03234	Peptidyl-prolyl cis-trans isomerase A	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase A	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase A	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase (Rotamase)- cyclophilin family	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	putative peptidyl-prolyl cis-trans isomerase A	Peptidyl-prolyl cis-trans isomerase A precursor	identified by match to protein family HMM PF00160 peptidyl-prolyl cis-trans isomerase, cyclophilin-type	identified by match to PFAM protein family HMM PF00160 peptidyl-prolyl cis-trans isomerase, cyclophilin-type	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Probable peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	peptidyl-prolyl cis-trans isomerase	peptidyl-prolyl cis-trans isomerase (rotamase)	Peptidyl-prolyl cis-trans isomerase A	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A	
ECOLI03235	Protein tsgA	Putative membrane protein	Putative uncharacterized protein	Protein tsgA	Protein tsgA homolog	Protein tsgA	Protein tsgA homolog	Residues 1 to 393 of 393 are 98 pct identical to residues 1 to 393 of a 393 aa protein from Escherichia coli K12 ref: NP_417823.1 putative transport	Protein tsgA homolog	InterProMatches:IPR007114; Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021) glucose/mannose:H+ symporter	conserved hypothetical protein	IPR005829: Sugar transporter superfamily; IPR007114: Major facilitator superfamily putative MFS family transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein gbs1881	membrane protein, putative	Protein tsgA homolog	Similar to Q89A60 Putative transport protein from Buchnera aphidicola (388 aa). FASTA: opt: 636 Z-score: 709.7 E(): 1.1e-31 636; Smith-Waterman score: 636; 29.793 identity in 386 aa overlap. Contains a frameshift after aa 119 ORF ftt1380 pseudo conserved hypothetical membrane protein,pseudogene	Protein tsgA homolog	Protein tsgA	go_component: clathrin-coated vesicle [goid 0030136]; go_component: COPI-coated vesicle [goid 0030137]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810] MSF tranporter, putative	Code: GEPR; COG: COG0477 putative transport	Code: GEPR; COG: COG0477 putative transport	Code: GEPR; COG: COG0477 putative transport	Protein tsgA	Conserved integral membrane protein precursor	Conserved hypothetical membrane protein	pseudo conserved hypothetical membrane protein,pseudogene Similar to Q89A60 Putative transport protein from Buchnera aphidicola (388 aa). FASTA: opt: 636 Z-score: 709.7 E(): 1.1e-31 636; Smith-Waterman score: 636; 29.793 identity in 386 aa overlap. Contains a frameshift after aa 119 ORF ftt1380	Protein tsgA	transport protein, MFS family	
ECOLI03236	Nitrite reductase [NAD(P)H] large subunit	Putative nitrite reductase (NAD(P)H) large subunit	NAD(P)H-nitrite reductase	Nitrite reductase large subunit	Putative nitrite reductase	Putative nitrite reductase (NAD(P)H), large subunit	Nitrite reductase [NAD(P)H] large subunit	Nitrite reductase [NAD(P)H] large subunit	Putative nitrite reductase (NAD(P)H) subunit	Nitrite reductase [NAD(P)H], large subunit	Nitrite reductase (NAD(P)H), large subunit	Nitrite reductase (NAD(P)H) subunit	SC7A8.26, nirB, probable nitrite reductase large subunit, len: 871 aa; similar to TR:Q00943 (EMBL:Z68122) Pichia angusta nitrite reductase Yni1, 1044 aa; fasta scores: opt: 1960 z-score: 2117.6 E(): 0; 43.2% identity in 868 aa overlap and SW:NIRB_ECOLI (EMBL:X14202) Escherichia coli nitrite reductase [NAD(P)H] large subunit (EC 1.6.6.4) NirB 847 aa; fasta scores:opt: 1609 z-score: 1739.1 E(): 0; 52.1% identity in 845 aa overlap. Contains Pfam match to entry PF01077 NIR_SIR, Nitrite and sulphite reductase and two matches to Prosite entries PS00136 Serine proteases, subtilase family, aspartic acid active site and PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site putative nitrite reductase large subunit NirB	NAD(P)H-nitrite reductase	Residues 1 to 835 of 835 are 99 pct identical to residues 13 to 847 of a 847 aa protein from Escherichia coli K12 ref: NP_417824.1 nitrite reductase (NAD(P)H) subunit	Nitrite reductase	NirB	PROBABLE NITRITE REDUCTASE [NAD(P)H] LARGE SUBUNIT [FAD FLAVOPROTEIN] NIRB	Mb0258, nirB, len: 853 aa. Equivalent to Rv0252, len: 853 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 853 aa overlap). Probable nirB (alternate gene name: nasB), nitrite reductase [NAD(P)H] large subunit (EC 1.6.6.4), flavoprotein containing siroheme and a 2FE-2S iron-sulfur centre. Highly similar to many others bacterial enzymes e.g. P08201|NIRB_ECOLI NITRITE REDUCTASE (NAD(P)H) LARGE SUBUNIT from Escherichia coli strain K12 (847 aa), FASTA scores: opt: 2775, E(): 0, (49.8% identity in 840 aa overlap); Q06458|NIRB_KLEPN NITRITE REDUCTASE (NAD(P)H) LARGE SUBUNIT (957 aa), FASTA scores: opt: 2902, E(): 0, (54.2% identity in 827 aa overlap). Contains PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. HOMODIMER WHICH ASSOCIATES WITH NIRD|Rv0253. COFACTORS: FAD; Iron; Siroheme. PROBABLE NITRITE REDUCTASE [NAD(P)H] LARGE SUBUNIT [FAD FLAVOPROTEIN] NIRB	IPR000103: Pyridine nucleotide-disulphide oxidoreductase, class-II; IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I; IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase;IPR005117: Nitrite/sulfite reductase ferredoxin-like half domain;IPR006066: Nitrite and sulfite reductase iron-sulfur/siroheme-binding site;IPR006067: Nitrite and sulphite reductase 4Fe-4S domain;IPR007419: BFD-like [2Fe-2S]-binding domain nitrite reductase, large subunit	similar to Salmonella typhi CT18 nitrite reductase large subunit nitrite reductase large subunit	Nitrite reductase	nitrite reductase [NAD(P)H] large subunit	Nitrite reductase large subunit	similar to nitrite reductase (GI:19577345) (Aspergillus fumigatus); go_function: nitrite reductase (NO-forming) activity [goid 0050421]; go_process: nitrate assimilation [goid 0042128] nitrite reductase	BFD-like (2Fe-2S)-binding region	Code: C; COG: COG1251 nitrite reductase (NAD(P)H) subunit	Nitrite reductase (NAD(P)H)subunit	Code: C; COG: COG1251 nitrite reductase (NAD(P)H) subunit	
ECOLI03237	Nitrite reductase [NAD(P)H] small subunit	Ferredoxin subunit of nitrite reductase	Nitrite reductase [NAD(P)H] small subunit	Putative nitrite reductase	putative nitrite reductase (NAD(P)H) smallsubunit	Nitrite reductase [NAD(P)H] small subunit	Nitrite reductase [NAD(P)H] small subunit	Nitrite reductase [NAD(P)H], small subunit	Nitrite reductase [NAD(P)H], small subunit	Nitrite reductase (NAD(P)H), small subunit	Nitrite reductase [NAD(P)H] small subunit	SC7A8.27, nirC, probable nitrite reductase small subunit, len: 131 aa; similar to TR:O53675 (EMBL:AL021929) Mycobacterium tuberculosis nitrite reductase small subunit NirD, 118 aa; fasta scores: opt: 353 z-score: 455.1 E(): 5.9e-18; 56.5% identity in 92 aa overlap and to SW:NIRD_ECOLI (EMBL:X14202) Escherichia coli nitrite reductase [NAD(P)H] small subunit (EC 1.6.6.4) NirD, 108 aa; fasta scores: opt: 265 z-score: 346.0 E(): 7e-12; 46.9% identity in 96 aa overlap putative nitrite reductase small subunit NirC	Ferredoxin subunits of nitrite reductase and ring -hydroxylating dioxygenase	Residues 1 to 108 of 108 are 99 pct identical to residues 1 to 108 of a 108 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289914.1 nitrite reductase (NAD(P)H) subunit	Nitrite reductase [NAD	NirD	PROBABLE NITRITE REDUCTASE [NAD(P)H] SMALL SUBUNIT NIRD	Mb0259, nirD, len: 118 aa. Equivalent to Rv0253, len: 118 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 118 aa overlap). Probable nirD, nitrite reductase [NAD(P)H] small subunit (EC 1.6.6.4), similar to others e.g.  P23675|NIRD_ECOLI|B3366|Z4727|ECS4217 from Escherichia coli strains K12 and O157:H7 (108 aa), FASTA scores: opt: 271, E():1.7e-12, (41.9% identity in 105 aa overlap).  ASSOCIATES WITH NIRB|Rv0252. PROBABLE NITRITE REDUCTASE [NAD(P)H] SMALL SUBUNIT NIRD	nitrite reductase, small subunit	similar to Salmonella typhi CT18 nitrite reductase (NAD(P)H) small subunit nitrite reductase (NAD(P)H) small subunit	Nitrite reductase	nitrite reductase [NAD(P)H] small subunit	Nitrite reductase [NAD(P)H] small subunit	Code: PR; COG: COG2146 nitrite reductase (NAD(P)H) subunit	Code: PR; COG: COG2146 nitrite reductase (NAD(P)H) subunit	Nitrite reductase (NAD(P)H) large subunit, NirD	Nitrite reductase (NAD(P)H) large subunit, NirD	Nitrite reductase (NAD(P)H), small subunit	Code: PR; COG: COG2146 nitrite reductase (NAD(P)H) subunit	
ECOLI03238	Probable nitrite transporter	Putative nitrite transporter	putative nitrite transporter	Potential nitrite transporter	Putative transporter, FNT family	Nitrite transporter	Nitrite reductase	Formate/nitrite family of transporter	Residues 1 to 268 of 268 are 100 pct identical to residues 1 to 268 of a 268 aa protein from Escherichia coli K12 ref: NP_417826.1 nitrite transporter	Putative nitrite transporter	identified by match to protein family HMM PF01226 transporter, FNT family	formate/nitrite transporter	IPR000292: Formate/nitrite transporter FNT family, nitrite transport protein	similar to Salmonella typhi CT18 putative nitrite transporter putative nitrite transporter	Putative nitrite transporter, FNT family	Formate-nitrate transporter	Probable nitrite transporter	Code: P; COG: COG2116 Nitrite transporter	Code: P; COG: COG2116 Nitrite transporter	probable nitrite transporter	Code: P; COG: COG2116 Nitrite transporter	Potential nitrite transporter	Putative nitrite transporter	formate/nitrite transporter identified by similarity to SP:P11097; match to protein family HMM PF01226	Potential nitrite transporter	Nitrite transporter	probable nitrite transporter identified by match to protein family HMM PF01226; match to protein family HMM TIGR00790	Putative nitrite transporter	Nitrite transporter	
ECOLI03239	Siroheme synthase	Blr1477 protein	Probable uroporphyrinogen-III C-methyltransferase [Source:GeneDB_Spombe;Acc:SPCC1739.06c]	Siroheme synthase	Siroheme synthase	DEHA2E07128p;similar to uniprot|P36150 Saccharomyces cerevisiae YKR069W MET1 S-adenosyl-L-methionine uroporphyrinogen III transmethylase involved in sulfate assimilation methionine metabolism and siroheme biosynthesis;	Putative uroporphyrin-III methyltransferase	Siroheme synthase	Siroheme synthase	Siroheme synthase	Siroheme synthase	Siroheme synthase 2	Siroheme synthase	SIROHEME SYNTHASE	Putative uroporphyrinogen III methyltransferase	Siroheme synthase	Putative siroheme synthase	SCL11.09c, probable uroporphyrin-III methyltransferase, len: 410 aa; similar to TR:O05812 (EMBL:Z95207) Mycobacterium tuberculosis CysG, 405 aa; fasta scores: opt: 1487 z-score: 1630.7 E(): 0; 58.7% identity in 409 aa overlap and to SW:SUMT_BACME (EMBL:M62881) Bacillus megaterium uroporphyrin-III C-methyltransferase (EC 2.1.1.107) CobA, 238 aa; fasta scores: opt: 719 z-score: 794.9 E(): 0; 48.1% identity in 233 aa overlap. Contains Pfam match to entry PF00590 TP_methylase, Tetrapyrrole (Corrin/Porphyrin) Methylases and match to Prosite entry PS00840 Uroporphyrin-III C-methyltransferase signature 2 putative uroporphyrin-III methyltransferase	Residues 1 to 457 of 457 are 99 pct identical to residues 1 to 457 of a 457 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289916.1 uroporphyrinogen III methylase; sirohaeme biosynthesis	Siroheme synthase	Siroheme synthase	Siroheme synthase	CysG2	POSSIBLE MULTIFUNCTIONAL ENZYME SIROHEME SYNTHASE CYSG: UROPORPHYRIN-III C-METHYLTRANSFERASE (UROGEN III METHYLASE) (SUMT) (UROPORPHYRINOGEN III METHYLASE) (UROM) + PRECORRIN-2 OXIDASE + FERROCHELATAS	Mb2872c, cysG, len: 405 aa. Equivalent to Rv2847c, len: 405 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 405 aa overlap). Possible cysG, multifunctional enzyme, siroheme synthase containing uroporphyrin-iii c-methyltransferase (EC 2.1.1.107), precorrin-2 oxidase (EC 1.-.-.-) and ferrochelatase (EC 4.99.1.-). C-terminus highly similar to many uroporphyrin-iii c-methyltransferases e.g. Q51720|COBA UROPORPHYRINOGEN III METHYLTRANSFERASE from Propionibacterium freudenreichii (257 aa), FASTA scores: opt: 776, E(): 1.5e-39, (48.95% identity in 243 aa overlap); Q9HMY4|UROM|VNG2331G S-ADENOSYL-L-METHIONINE:UROPORPHYRINOGEN III METHYLTRANSFERASE from Halobacterium sp. strain NRC-1 (246 aa), FASTA scores: opt: 704, E(): 3.1e-35, (49.4% identity in 245 aa overlap); P42437|NASF_BACSU|NASBE UROPORPHYRIN-III C-METHYLTRANSFERASE from Bacillus subtilis (483 aa), FASTA scores: opt: 610, E(): 2.4e-29, (42.1% identity in 240 aa overlap); etc. And highly similar over entire length to other proteins e.g.  Q9L1C9|SCL11.09c UROPORPHYRINOGEN III METHYLTRANSFERASE from Streptomyces coelicolor (410 aa), FASTA scores: opt: 1481, E(): 5.6e-82, (58.45% identity in 409 aa overlap); Q9I0M7|CYSG|PA2611 SIROHEME SYNTHASE from Pseudomonas aeruginosa (465 aa), FASTA scores: opt: 609, E(): 2.7e-29, (34.7% identity in 444 aa overlap); P11098|CYSG_ECOLI|B3368|Z4729|ECS4219 SIROHEME SYNTHASE from Escherichia coli stains O157:H7 and K12 (457 aa), FASTA scores: opt: 543, E(): 9.1e-27, (31.3% identity in 450 aa overlap); etc. BELONGS TO A FAMILY THAT GROUPS SUMT, CYSG, CBIF/COBM AND CBIL/COBI. Note that previously known as cysG2. POSSIBLE MULTIFUNCTIONAL ENZYME SIROHEME SYNTHASE CYSG: UROPORPHYRIN-III C-METHYLTRANSFERASE (UROGEN III METHYLASE) (SUMT) (UROPORPHYRINOGEN III METHYLASE) (UROM) + PRECORRIN-2 OXIDASE + FERROCHELATASE	Siroheme synthase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark siroheme synthase	IPR000878: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; IPR003043: Uroporphiryn-III C-methyltransferase; IPR006366: Uroporphyrin-III C-methyltransferase, C-terminal;IPR006367: Siroheme synthase, N-terminal siroheme synthase, catalyses four separate reactions that are required for the transformation of uroporphyrinogen III into siroheme	similar to Salmonella typhi CT18 siroheme synthase siroheme synthase	
ECOLI03240	Uncharacterized protein yhfL	Hypothetical protein yhfL	Uncharacterized protein yhfL	Residues 1 to 55 of 55 are 100 pct identical to residues 1 to 55 of a 55 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289917.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	Lipoprotein, putative	Putative outer membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhfL	conserved hypothetical protein; putative signal peptide Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative lipoprotein	conserved hypothetical protein KEGG: pen:PSEEN4057 hypothetical protein	Putative uncharacterized protein precursor	Conserved secreted peptide	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	Putative outer membrane lipoprotein	
ECOLI03241	Putative fructoselysine transporter frlA	Putative fructoselysine transporter frlA	Putative amino acid/amine (Lysine) APC transporter	Amino acid permease family protein	Code: E; COG: COG0531 putative amino acid/amine transport protein	Code: E; COG: COG0531 putative amino acid/amine transport protein	Amino acid permease-associated region	Putative fructoselysine transporter FrlA	Amino acid permease-associated region	jgi|Lotgi1|160167|fgenesh2_pg.C_sca_23000185	Predicted fructoselysine transporter	Putative fructoselysine transporter FrlA	Amino acid permease-associated region	Putative uncharacterized protein	Putative fructoselysine transporter FrlA	Putative fructoselysine transporter FrlA	Amino acid transport protein	Putative fructoselysine transporter	locus:Cbn-aat-7	Asc-type amino acid transporter 1 (Asc-1)(Solute carrier family 7 member 10) [Source:UniProtKB/Swiss- Prot;Acc:Q9NS82]	Putative fructoselysine transporter	FrlA protein	HYPOTHETICAL Y+L amino acid transporter 1	Predicted fructoselysine transporter	Predicted fructoselysine transporter	predicted fructoselysine transporter	Amino acid permease-associated region	
ECOLI03242	Fructoselysine 6-phosphate deglycase	Glucosamine--fructose-6-phosphate aminotransferase	MocD family protein, putative	Glucosamine--fructose-6-phosphate aminotransferase-related protein	Putative phosphosugar-binding protein	Lmo1998 protein	isomerizing glucosamine-fructose-6-phosphate aminotransferase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Fructoselysine 6-phosphate deglycase	glucosamine-fructose-6-phosphate aminotransferase	Predicted phosphosugar isomerase	Lin2106 protein	Residues 1 to 347 of 347 are 99 pct identical to residues 1 to 347 of a 347 aa protein from Escherichia coli K12 ref: NP_417830.1 putative transport protein	similar to Salmonella typhi CT18 putative phosphosugar-binding protein putative phosphosugar-binding protein	identified by similarity to GP:16414620 conserved hypothetical protein	Code: M; COG: COG2222 putative transport protein	Citation: Capela, D. et. al. (2001) Proc. Natl.  Acad. Sci. USA 98: 9877-9882. Sugar isomerase (SIS)	Code: M; COG: COG2222 putative transport protein	predicted phosphosugar isomerase related to fructoselysine 6-phosphate deglycase; COG2222, pfam01380; predicted membrane protein	Glutamine--fructose-6-phosphate transaminase	Glutamine-fructose-6-phosphate transaminase (isomerizing)	glucosamine--fructose-6-phosphate aminotransferase, putative	Glutamine--fructose-6-phosphate transaminase (isomerizing) PFAM: sugar isomerase (SIS) KEGG: ccr:CC0444 SIS domain protein	Complete genome	putative transport protein Code: M; COG: COG2222	Putative SIS domain protein	Glucosamine:fructose-6-phosphate aminotransferase (Isomerizing), AgaS	Putative uncharacterized protein	Glutamine--fructose-6-phosphate transaminase	
ECOLI03243	Protein frlC	glimmer prediction; global similarity to D-Tagatose 3-epimerase (GI: 2804234); similar gene found in adjacent ORF (SMA1353) Putative epimerase	Protein frlC	Predicted endonuclease	Residues 30 to 304 of 305 are 99 pct identical to residues 1 to 275 of a 275 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289920.1 orf, conserved hypothetical protein	Putative 4-hydroxyphenylpyruvate dioxygenase	Code: G; COG: COG1082 conserved hypothetical protein	Citation: Wiame, E. et. al. (2002) J. Biol. Chem.  277: 42523-42529. AP endonuclease, family 2	Code: G; COG: COG1082 conserved hypothetical protein	putative epimerase similarity:fasta; SWALL:DT3E_PSECI (SWALL:O50580); Pseudomonas cichorii; D-tagatose 3-epimerase; length 290 aa; id=32.05; ungapped id=34.32; E()=1.3e-18; 287 aa overlap; query 1-273 aa; subject 6-287 aa similarity:fasta; SWALL:Q92YX2 (EMBL:AE007261); Rhizobium meliloti; putative epimerase; length 298 aa; id=82.43; ungapped id=82.43; E()=7.2e-95; 279 aa overlap; query 1-279 aa; subject 20-298 aa	putative epimerase protein Similar to SMa1354 [Sinorhizobium meliloti] and mll3360 (D-tagatosa epimerase) [Mesorhizobium loti] Similar to swissprot:Q92YX2 Putative location:bacterial inner membrane Psort-Score: 0.0263; go_component: intracellular [goid 0005622]; go_component: extrachromosomal DNA [goid 0046821]; go_function: DNA binding [goid 0003677]; go_function: endonuclease activity [goid 0004519]; go_process: DNA repair [goid 0006281]	Xylose isomerase-like TIM barrel PFAM: Xylose isomerase-like TIM barrel KEGG: rba:RB201 sugar phosphate isomerase/epimerase	hypothetical protein similarity to COG1082 Sugar phosphate isomerases/epimerases(Evalue: 2E-32)	Xylose isomerase domain protein TIM barrel	conserved hypothetical protein Code: G; COG: COG1082	Binding-protein-dependent transport systems inner membrane component	Xylose isomerase domain protein TIM barrel	Putative endonuclease	AP endonuclease, family 2	AP endonuclease, family 2	Predicted isomerase	AP endonuclease, family 2	Xylose isomerase domain protein TIM barrel	AP endonuclease, family 2	Xylose isomerase domain protein TIM barrel	Putative uncharacterized protein	AP endonuclease, family 2	AP endonuclease, family 2	AP endonuclease, family 2	
ECOLI03244	Fructoselysine kinase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE SUGAR KINASE PROTEIN	Sugar kinase, ribokinase family	Residues 1 to 261 of 261 are 99 pct identical to residues 1 to 261 of a 261 aa protein from Escherichia coli K12 ref: NP_417833.1 putative kinase	InterProMatches:IPR002173 2-keto-3-deoxygluconate kinase	IPR002173: Carbohydrate kinase, PfkB putative sugar kinases, ribokinase family	Putative sugar kinases	fructokinase	Code: G; COG: COG0524 putative kinase	Citation: Capela, D. et. al. (2001) Proc. Natl.  Acad. Sci. USA 98: 9877-9882. Carbohydrate kinase, PfkB	Code: G; COG: COG0524 putative kinase	Fructokinase	PfkB domain protein PFAM: PfkB domain protein KEGG: mba:Mbar_A2838 fructokinase	PfkB domain protein PFAM: PfkB domain protein KEGG: abo:ABO_0350 carbohydrate kinase, PfkB family	Putative sugar (2-ketogluconate) kinase, PfkB family	PfkB domain protein PFAM: PfkB domain protein KEGG: sco:SCO6978 putative carbohydrate kinase.	fructokinase identified by similarity to SP:P40713; match to protein family HMM PF00294	putative kinase Code: G; COG: COG0524	Sugar kinase, ribokinase family	Putative sugar kinase	PfkB	PfkB domain protein	PfkB domain protein	PfkB domain protein	Putative uncharacterized protein	Kinase, pfkB family	Kinase, pfkB family, putative	PfkB domain protein	YurL	
ECOLI03245	HTH-type transcriptional regulator frlR	HTH-type transcriptional regulator frlR	Residues 1 to 265 of 265 are 99 pct identical to residues 1 to 265 of a 265 aa protein from Escherichia coli K12 ref: NP_417834.1 putative transcriptional regulator	Transcription regulator	transcriptional regulator, GntR family	regulatory protein GntR, HTH:UbiC transcription regulator-associated	Code: K; COG: COG2188 putative transcriptional regulator	Code: K; COG: COG2188 putative transcriptional regulator	GntR-family transcriptional regulator	transcriptional regulator, GntR family	Transcriptional regulator, GntR family	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein KEGG: bur:Bcep18194_B2153 transcriptional regulator, GntR family	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein KEGG: bcn:Bcen_4434 transcriptional regulator, GntR family	Transcriptional regulator	putative transcriptional regulator Code: K; COG: COG2188	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH UbiC transcription regulator-associated KEGG: ret:RHE_PE00075 probable transcriptional regulator protein, GntR family	Transcriptional regulator	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	GntR-family transcriptional regulator FrlR	Transcriptional regulator, GntR-family	YurK	Predicted DNA-binding transcriptional regulator	GntR-family transcriptional regulator FrlR	Transcriptional regulator, GntR family	Putative uncharacterized protein	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	GntR-family transcriptional regulator FrlR	
ECOLI03246	Uncharacterized protein yhfS	Putative uncharacterized protein	Residues 1 to 361 of 361 are 96 pct identical to residues 1 to 361 of a 361 aa protein from Escherichia coli K12 ref: NP_417835.1 orf, conserved hypothetical protein	Similar to unknown protein YhfS of Escherichia coli	cysteine desulfurase	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhfS	conserved hypothetical protein	Cystathionine beta-lyase family protein	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative transcriptional regulator, GntR family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Cys/Met metabolism pyridoxal-phosphate-dependent enzyme	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhfS	Putative uncharacterized protein yhfS	Putative uncharacterized protein yhfS	Putative uncharacterized protein yhfS	Putative uncharacterized protein yhfS	Predicted protein	
ECOLI03247	Uncharacterized protein yhfT	Hypothetical protein yhfT	Putative transport system permease protein	Residues 1 to 434 of 434 are 99 pct identical to residues 1 to 434 of a 434 aa protein from Escherichia coli K12 ref: NP_417836.1 putative transport system permease protein	putative transport system permease protein	Putative uncharacterized protein	Putative uncharacterized protein yhfT	Putative integral membrane protein	putative transport system permease protein	putative inner membrane protein	Putative membrane protein	Putative integral membrane protein	Predicted inner membrane protein	Putative membrane protein	Putative transport system permease protein precursor	Putative membrane protein	Putative permease protein	Putative uncharacterized protein	Putative transport protein	Putative uncharacterized protein yhfT	Putative uncharacterized protein yhfT	Putative uncharacterized protein yhfT	Putative uncharacterized protein yhfT	Putative uncharacterized protein yhfT	Predicted inner membrane protein	Putative uncharacterized protein yhfT	YhfT protein	Predicted inner membrane protein	conserved predicted inner membrane protein	
ECOLI03248	Uncharacterized protein yhfU	Hypothetical protein yhfU	BH0588 protein	Residues 1 to 130 of 130 are 99 pct identical to residues 1 to 130 of a 130 aa protein from Escherichia coli K12 ref: NP_417837.1 orf, conserved hypothetical protein	Similar to unknown protein YhfU of Escherichia coli	hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhfU	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhfU	Putative uncharacterized protein yhfU	Putative uncharacterized protein yhfU	Putative uncharacterized protein yhfU	
ECOLI03249	Phosphotriesterase homology protein	Putative phosphotriesterase-family protein	Phosphotriesterase, putative	putative hydrolase	Phosphotriesterase homology protein	Putative phosphotriesterase	phosphotriesterase	SCG20A.16, probable phosphotriesterase-family protein, len: 302 aa; similar to SW:PHP_ECOLI (EMBL:U18997) Escherichia coli phosphotriesterase homology protein Php, 292 aa; fasta scores: opt: 319 z-score: 370.9 E(): 3.5e-13; 28.0% identity in 286 aa overlap. Contains Pfam match to entry PF02126 PTE, Phosphotriesterase family and match to Prosite entry PS01323 Phosphotriesterase family signature 2 putative phosphotriesterase-family protein	Residues 1 to 223 of 223 are 99 pct identical to residues 70 to 292 of a 292 aa protein from Escherichia coli K12 ref: NP_417838.1 putative hydrolase	Phosphotriesterase homology protein	Putative uncharacterized protein	Phosphotriesterase homology protein	Mb0235c, php, len: 326 aa. Equivalent to Rv0230c, len: 326 aa, from Mycobacterium tuberculosis strain H37Rv, (99.7% identity in 326 aa overlap). Probable php, phosphotriesterase (EC 3.1.8.1), similar to others e.g.  AAK42653.1|AE006849 putative aryldialkylphosphatase (phosphotriesterase) (paraoxonase) from Sulfolobus solfataricus (314 aa); PHP_ECOLI|P45548 PHOSPHOTRIESTERASE HOMOLOGY PROTEIN from Escherichia coli (292 aa), FASTA scores: opt: 408, E(): 7.1e-20, (31.1% identity in 305 aa overlap ); OPD_FLASP|P16648 parathion hydrolase precursor (365 aa), FASTA scores: opt: 319, E(): 5.1e-14, (34.5% identity in 333 aa overlap); etc. BELONGS TO THE PHOSPHOTRIESTERASE FAMILY. COFACTOR: CONTAINS 2 MOLES OF ZINC PER SUBUNIT. PROBABLE PHOSPHOTRIESTERASE PHP (PARATHION HYDROLASE) (PTE) (ARYLDIALKYLPHOSPHATASE) (PARAOXONASE) (A-ESTERASE) (ARYLTRIPHOSPHATASE) (PARAOXON HYDROLASE)	InterProMatches:IPR001559; Molecular Function: zinc ion binding (GO:0008270), Biological Process: catabolism (GO:0009056), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788) zin-ion binding putative hydrolase	phosphotriesterase	only found here and in Sulfolobus solfataricus parathion hydrolase	Code: R; COG: COG1735 putative hydrolase	Code: R; COG: COG1735 putative hydrolase	phosphotriesterase related [Source:HGNC Symbol;Acc:9590]	transcript_id=ENSOCUT00000001983	transcript_id=ENSDNOT00000005853	Code: R; COG: COG1735 putative hydrolase	putative phosphotriesterase protein similarity:fasta; SWALL:PHP_ECOLI (SWALL:P45548); Escherichia coli; phosphotriesterase homology protein; php; b3379; length 292 aa; 283 aa overlap; query 77-356 aa; subject 22-292 aa similarity:fasta; SWALL:Q8UBF0 (EMBL:AE009237); Agrobacterium tumefaciens str. C58; resiniferatoxin-binding, phosphotriesterase-related protein; orderedlocusnames=atu3066;; length 355 aa; 349 aa overlap; query 9-357 aa; subject 5-353 aa	Phosphotriesterase-like protein	uncharacterized domain HDIG KEGG: gka:GK1506 phosphotriesterase TIGRFAM: uncharacterized domain HDIG PFAM: aryldialkylphosphatase	Aryldialkylphosphatase	Phosphotriesterase-like protein	transcript_id=ENSFCAT00000013562	
ECOLI03250	Uncharacterized protein yhfW	Hypothetical protein yhfW	Phosphopentomutase	BH0592 protein	Residues 1 to 408 of 408 are 97 pct identical to residues 1 to 408 of a 408 aa protein from Escherichia coli K12 ref: NP_417839.1 putative mutase	InterProMatches:IPR010045; conversion of ribose-1-P/deoxyribose-1-P to ribose-5-P/deoxyribose-5-P phosphopentomutase	conserved hypothetical protein	Code: G; COG: COG1015 putative mutase	Code: G; COG: COG1015 putative mutase	Putative uncharacterized protein	Putative uncharacterized protein yhfW	Metalloenzyme superfamily protein	putative mutase Code: G; COG: COG1015	Phosphopentomutase	putative phosphomutase	Metalloenzyme domain protein	Phosphopentomutase	Predicted mutase	Metalloenzyme domain protein	Phosphopentomutase	Metalloenzyme domain protein	Putative mutase	Putative uncharacterized protein	Phosphopentomutase	Metalloenzyme domain protein	Putative mutase	Putative mutase	Putative mutase	Putative mutase	
ECOLI03251	Uncharacterized protein yhfX	Hypothetical protein yhfX	Putative alanine racemase	BH0591 protein	Residues 1 to 387 of 387 are 94 pct identical to residues 1 to 387 of a 387 aa protein from Escherichia coli K12 ref: NP_417840.1 orf, conserved hypothetical protein	Similar to unknown protein YhfX of Escherichia coli	InterProMatches:IPR001608; Molecular Function: alanine racemase activity (GO:0008784), Molecular Function: pyridoxal phosphate binding (GO:0030170) putatibe alanine racemase	conserved hypothetical protein	Code: E; COG: COG3457 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein KEGG: jan:Jann_0884 hypothetical protein, ev=1e-163, 71% identity	Putative uncharacterized protein	Putative uncharacterized protein yhfX	conserved hypothetical protein Code: E; COG: COG3457	Predicted amino acid racemase	putative amino acid racemase	Alanine racemase family protein	Alanine racemase domain protein	Predicted amino acid racemase	Alanine racemase family	Alanine racemase domain protein	Alanine racemase family	Putative alanine racemase	Putative uncharacterized protein	Amino acid racemase-like protein	Alanine racemase family	Putative uncharacterized protein	Putative uncharacterized protein	Putative amino acid racemase	
ECOLI03252	Uncharacterized protein yhfY	Residues 1 to 134 of 134 are 95 pct identical to residues 1 to 134 of a 134 aa protein from Escherichia coli K12 ref: NP_417841.1 orf, conserved hypothetical protein	Similar to unknown protein YhfY of Escherichia coli	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhfY	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhfY	Putative uncharacterized protein yhfY	Putative uncharacterized protein yhfY	Putative uncharacterized protein yhfY	Putative uncharacterized protein yhfY	Predicted protein	Putative uncharacterized protein yhfY	YhfY protein	Putative uncharacterized protein	
ECOLI03253	Uncharacterized protein yhfZ	Hypothetical protein yhfZ	Putative uncharacterized protein	BH0586 protein	Residues 29 to 301 of 301 are 96 pct identical to residues 1 to 273 of a 273 aa protein YHFZ_ECOLI sp: P45552 orf, conserved hypothetical protein	Similar to unknown protein YhfZ of Escherichia coli	InterProMatches:IPR009058 hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein yhfZ	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhfZ	DNA-binding protein	conserved hypothetical protein	Hypothetical protein	Transcriptional regulator	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative transcriptional regulator, GntR family	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein KEGG: rrs:RoseRS_0859 hypothetical protein	
ECOLI00309	Putative uncharacterized protein yahH	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	YahH protein	Putative uncharacterized protein	
ECOLI03254	Tryptophanyl-tRNA synthetase	Mitochondrial tryptophanyl-tRNA synthetase.  [Source:SGD;Acc:S000002676]	similar to sp|P04803 Saccharomyces cerevisiae YDR268w MSW1 tryptophanyl-tRNA synthetase, mitochondrial, hypothetical start	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC3G9.13c]	similar to sp|P04803 Saccharomyces cerevisiae YDR268w MSW1 tryptophanyl-tRNA synthetase, mitochondrial singleton, start by similarity	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	highly similar to uniprot|P04803 Saccharomyces cerevisiae YDR268w MSW1 tryptophanyl-tRNA synthetase mitochondrial;	DEHA2G08228p;similar to uniprot|P04803 Saccharomyces cerevisiae YDR268W MSW1 Mitochondrial tryptophanyl-tRNA synthetase;	Tryptophanyl-tRNA synthetase 1	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase	
ECOLI03255	Phosphoglycolate phosphatase	Phosphoglycolate phosphatase	Phosphoglycolate phosphatase	Phosphoglycolate phosphatase	Phosphoglycolate phosphatase 1	Phosphoglycolate phosphatase	Phosphoglycolate phosphatase	All0135 protein	Putative hydrolase	putative phosphoglycolate phosphatase	Phosphoglycolate phosphatase	Phosphoglycolate phosphatase	similar to GB:X65933, SP:Q05097, and PID:49077; identified by sequence similarity; putative phosphoglycolate phosphatase	Phosphoglycolate phosphatase	Putative phosphoglycolate phosphatase	Putative phosphoglycolate phosphatase	Phosphoglycolate phosphatase	Phosphoglycolate phosphatase	PMID: 8969498 best DB hits: BLAST: swissprot:P54607; YHCW_BACSU HYPOTHETICAL 24.7 KD PROTEIN IN; E=6e-15 ref:XP_010289.2; DNA segment, numerous copies, expressed probes; E=9e-14 gb:AAA58622.1; (M86934) Gene from Xp22.3 which escapes; E=4e-13 COG: BS_yhcW; COG0637 Predicted phosphatase/phosphohexomutase; E=6e-16 gph; COG0546 Predicted phosphatases; E=6e-08 PA2067; COG0637 Predicted phosphatase/phosphohexomutase; E=8e-08 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=2.1e-26 conserved hypothetical protein-putative phosphatase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PHOSPHOGLYCOLATE PHOSPHATASE PROTEIN	Phosphoglycolate phosphatase	Putative phosphoglycolate phosphatase	Phosphoglycolate phosphatase	PHOSPHOGLYCOLATE PHOSPHATASE	Phosphoglycolate phosphatase	Phosphoglycolate phosphatase	CDS_ID OB0932 L-2-haloalkanoic acid dehalogenase	Residues 1 to 252 of 252 are 99 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289924.1 phosphoglycolate phosphatase	Phosphoglycolate phosphatase	
ECOLI03256	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	D-ribulose-5-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	D-ribulose-5-phosphate 3-epimerase	D-RIBULOSE 5 PHOSPHATE 3 EPIMERASE;06_1040, D-RIBULOSE 5 PHOSPHATE 3 EPIMERASE, RPE_METJA, gene found by Glimmer;	Probable ribulose-phosphate 3-epimerase	Probable ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Ribulose-5-phosphate 3-epimerase	similar to GB:M95623, GB:X04217, GB:X04808, GB:D10608, GB:D12722, SP:P08397, PID:292385, PID:292386, PID:35305, PID:35307,  and PID:35309; identified by sequence similarity; putative ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Putative ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Ribulose-5-phosphate 3-epimerase	Probable ribulose-5-phosphate 3-epimerase	Pentose-5-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Dod	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Pentose-5-phosphate-3-epimerase	Ribulose-phosphate 3-epimerase	
ECOLI03257	DNA adenine methylase	Adenine-specific DNA metylase	DNA adenine methylase	330aa long hypothetical modification methylase	DNA adenine modification methylase	Probable site-specific DNA-methyltransferase	N-6 Adenine-specific DNA methylase:N6 adenine- specific DNA methyltransferase, D12 class	Dam	Site-specific DNA methylase	DNA adenine methylase	Site-specific DNA-methyltransferase	putative DNA adenine methylase	DNA adenine methylase	DNA adenine methylase	DNA adenine methylase	DNA adenine methylase	Putative adenine-specific DNA methyltransferase	METHYLTRANSFERASE	Adenine-specific DNA methyltransferase	Adenine-specific DNA methyltransferase	Putative site-specific DNA-methyltransferase	DNA adenine methylase	DNA adenine methylase	BH4003 protein	Site-specific DNA methylase	Residues 1 to 278 of 278 are 99 pct identical to residues 1 to 278 of a 278 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289926.1 DNA adenine methylase	DNA adenine methylase	DNA adenine methylase	conserved gene DNA adenine methylase	
ECOLI03258	Protein damX	DamX protein	DamX protein	Protein damX	Residues 1 to 430 of 430 are 99 pct identical to residues 1 to 428 of a 428 aa protein from Escherichia coli K12 ref: NP_417847.1 putative membrane protein; interferes with cell division	Conserved hypothetical membrane protein	Putative membrane protein DamX, interferes with cell division	IPR001950: Translation initiation factor SUI1 membrane protein	similar to Salmonella typhi CT18 DamX protein DamX protein	Putative uncharacterized protein	Membrane protein	interferes with cell division; Code: S; COG: COG3266 putative membrane protein	putative membrane protein; interferes with cell division; Code: S; COG: COG3266 DamX	conserved hypothetical protein	interferes with cell division; Code: S; COG: COG3266 putative membrane protein	Conserved hypothetical membrane protein	Putative membrane protein	Conserved hypothetical membrane protein	Conserved hypothetical membrane protein	DamX protein Code: S; COG: COG3266	Conserved hypothetical membrane protein	conserved hypothetical protein	Sporulation domain protein	Putative membrane protein; interferes with cell division	Putative uncharacterized protein	DamX protein	Sporulation domain protein	Predicted protein	
ECOLI03259	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	identified by match to TIGR protein family HMM TIGR01357 3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	3-dehydroquinate synthase	
ECOLI03260	Shikimate kinase 1	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Putative shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimate kinase	Shikimic acid kinase I	Shikimate kinase	Shikimate kinase	Shikimate kinase 1	Shikimate kinase	Shikimate kinase	Shikimate kinase	putative shikimate kinase	Shikimate kinase 1	similar to SP:P24167; identified by sequence similarity; putative shikimate kinase	Shikimate kinase	Shikimate kinase	
ECOLI03261	Protein transport protein hofQ	Competence protein E	ComE	General secretion pathway protein D, putative	Type IV pilus (Tfp) assembly protein PilQ	Type II secretion system protein	Putative secretion system protein	putative fimbrial assembly protein	Protein transport protein hofQ	Bacterial type II/III secretion system protein	Fimbrial assembly protein	MSHA biogenesis protein MshL	Putative type II secretion system protein	PMID: 10360571 best DB hits: BLAST: pir:B72292; hypothetical protein TM1117 - Thermotoga maritima; E=4e-24 pir:C83561; probable type II secretion system protein PA0685; E=8e-22 pir:S32858; outD protein - Erwinia carotovora ----- embl:; E=1e-18 COG: TM1117; COG1450 General secretory pathway protein D; E=4e-25 PFAM: PF00263; Bacterial type II and III secr; E=1.7e-25 conserved hypothetical protein-putative protein transporter	Type II/III secretion system protein	Fimbrial assembly protein	Putative transport portein	Type 4 pili secretin	Type II secretory pathway, component HofQ	Residues 1 to 389 of 389 are 98 pct identical to residues 24 to 412 of a 412 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289930.1 putative transport portein	Putative membrane transport protein	Similarities with protein transport protein HofQ of Escherichia coli	IPR001775: Bacterial general secretion pathway protein D; IPR001814: Filamentous bacteriophage Vg4 protein; IPR003522: Type III secretion system outer membrane G protein;IPR004845: Bacterial type II secretion system protein D;IPR004846: Bacterial type II and III secretion system protein;IPR005644: NolW-like putative transport protein, possibly in biosynthesis of type IV pilin	similar to Salmonella typhi CT18 type II secretion system protein type II secretion system protein	Putative outer membrane secretin family protein	pili secretion protein PilQ	DNA transformation protein comE; Similar to: HI0435, COME_HAEIN competence protein E	General secretory pathway protein D GspD protein	Type IV pili biogenesis protein PilQ	
ECOLI03262	Uncharacterized protein yrfA	Hypothetical protein yrfA	Putative uncharacterized protein yrfA	conserved hypothetical protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yrfA	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yrfA	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yrfA	Putative uncharacterized protein	
ECOLI03263	Uncharacterized protein yrfB	Hypothetical protein yrfB	Putative uncharacterized protein yrfB	Residues 1 to 123 of 123 are 98 pct identical to residues 24 to 146 of a 146 aa protein from Escherichia coli K12 ref: NP_417852.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein yrfB	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved membrane protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative inner membrane protein	
ECOLI03264	Uncharacterized protein yrfC	Hypothetical protein yrfC	Putative uncharacterized protein yrfC	Residues 1 to 179 of 179 are 100 pct identical to residues 1 to 179 of a 179 aa protein from Escherichia coli K12 ref: NP_417853.1 orf, conserved hypothetical protein	Putative membrane protein	IPR007813: Fimbrial assembly putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative inner membrane protein	Code: NU; COG: COG3166 conserved hypothetical protein	Code: NU; COG: COG3166; orf conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein yrfC	Membrane protein	conserved hypothetical protein Code: NU; COG: COG3166	Membrane protein	conserved hypothetical protein	Fimbrial assembly family protein precursor	Putative uncharacterized protein yrfC	Putative uncharacterized protein	PilN family protein	Fimbrial assembly family protein precursor	Predicted fimbrial assembly protein	Fimbrial assembly protein PilN	PilN family protein	Fimbrial assembly family protein precursor	PilN family protein	Putative uncharacterized protein	
ECOLI03265	Uncharacterized protein yrfD	Hypothetical protein yrfD	Putative uncharacterized protein	Putative uncharacterized protein yrfD	Residues 1 to 259 of 259 are 98 pct identical to residues 10 to 268 of a 268 aa protein from Escherichia coli K12 ref: NP_417854.1 orf, conserved hypothetical protein	Similar to unknown protein YrfD of Escherichia coli	putative periplasmic protein	Putative uncharacterized protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yrfD	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yrfD	Putative uncharacterized protein	HofM protein	Putative uncharacterized protein precursor	Predicted pilus assembly protein	Putative uncharacterized protein	HofM protein	Putative uncharacterized protein precursor	HofM protein	
ECOLI03266	Penicillin-binding protein 1A	Penicillin-binding protein 1A	Putative penicillin binding protein	Penicillin-binding protein, 1A family	PonA	Penicillin-binding protein 1	Penicillin-binding protein 1A	Penicillin-binding protein	Penicillin-binding protein	Similar to penicillin-binding protein 1B	Multimodular transpeptidase-transglycosylase PBP 2A	Penicillin-binding protein 2A	Putative penicillin-binding protein	Penicillin-binding protein 1A	identified by match to protein family HMM PF00905; match to protein family HMM PF00912 penicillin-binding protein	identified by match to TIGR protein family HMM TIGR01558 penicillin-binding protein, 1A family	Penicillin-binding protein	Penicillin-binding protein 1A	Penicillin-binding protein 1A	Penicillin-binding protein, 1A family	PENICILLIN-BINDING PROTEIN 1A	Penicillin-binding protein 1A	Peptidoglycan synthetase; penicillin-binding protein 1A	CDS_ID OB3017 penicillin-binding protein	Penicillin-binding protein 1F	Residues 1 to 858 of 858 are 99 pct identical to residues 1 to 858 of a 858 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289935.1 peptidoglycan synthetase; penicillin-binding protein 1A	Penicillin-binding protein	Penicillin-binding protein 1A	Membrane carboxypeptidase	
ECOLI03267	ADP compounds hydrolase nudE	Hydrolase	Sll1054 protein	ADP compounds hydrolase	NUDIX hydrolase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	MutT/nudix family protein	Putative NUDIX hydrolase	Alr2954 protein	Lmo1965 protein	putative MutT/nudix family protein	ADP-ribose pyrophosphatase	ADP compounds hydrolase nudE	MutT/nudix family protein	MutT/nudix family protein	ADP compounds hydrolase	Putative uncharacterized protein	MutT/nudix family protein	MutT/nudix family protein	Putative uncharacterized protein yrfE	Bis(5'-adenosyl)-triphosphatase	MutT/nudix family protein	Lin2079 protein	Residues 1 to 186 of 186 are 99 pct identical to residues 1 to 186 of a 186 aa protein from Escherichia coli K12 ref: NP_417856.1 orf, conserved hypothetical protein	Putative hydrolase	Putative nucleoside diphosphate hydrolase protein	ADP compounds hydrolase nudE	
ECOLI03268	Putative membrane protein igaA homolog	Putative membrane protein igaA homolog	Intracellular growth attenuator protein	Putative membrane protein igaA homolog	Residues 1 to 711 of 711 are 99 pct identical to residues 1 to 711 of a 711 aa protein from Escherichia coli K12 ref: NP_417857.1 putative dehydrogenase	Putative membrane protein igaA homolog	Complete genome; segment 1/17	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Intracellular growth attenuator protein igaA	putative dehydrogenase	putative dehydrogenase	putative dehydrogenase	putative dehydrogenase	Putative membrane protein IgaA	Putative membrane protein precursor	Putative uncharacterized protein yrfF	Membrane protein precursor	Putative membrane protein precursor	putative dehydrogenase	Membrane protein precursor	putative protein IgaA-like membrane protein	Intracellular growth attenuator IgaA	Putative dehydrogenase	Putative uncharacterized protein	Putative membrane protein	Intracellular growth attenuator IgaA precursor	Predicted inner membrane protein	
ECOLI03269	Uncharacterized protein yrfG	Putative uncharacterized protein	Probable hydrolase	Putative hydrolase	Putative uncharacterized protein	Hypothetical protein yrfG	HAD-superfamily hydrolase, subfamily IA, variant 3 protein family	Putative hydrolase	HAD-superfamily hydrolase	Putative phosphatase	Residues 1 to 237 of 237 are 100 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli K12 ref: NP_417858.1 putative phosphatase	Putative uncharacterized protein	IPR005833: Haloacid dehalogenase/epoxide hydrolase; IPR005834: Haloacid dehalogenase-like hydrolase; IPR006402: HAD-superfamily hydrolase, subfamily IA, variant 3 putative hydrolase	similar to Salmonella typhi CT18 putative hydrolase putative hydrolase	Putative uncharacterized protein	Hydrolase, haloacid dehalogenase-like family	Hydrolase, haloacid dehalogenase-like family	Putative hydrolase	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509 HAD-superfamily hydrolase, subfamily IA, variant 3 family protein	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509 hydrolase, HAD-superfamily, subfamily IA, variant 3	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509 HAD-superfamily hydrolase, subfamily IA, variant 3	HAD-superfamily hydrolase, subfamily IA, variant 3	Code: R; COG: COG1011 putative phosphatase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative hydrolase, contains a phosphatase-like domain	Code: R; COG: COG1011 putative phosphatase	Haloacid dehalogenase-like hydrolase	HAD-superfamily hydrolase subfamily IA, variant 3	conserved hypothetical protein	HAD-superfamily hydrolase subfamily IA, variant 3	
ECOLI03270	Heat shock protein 15	Heat shock protein 15 homolog	Putative uncharacterized protein	Putative uncharacterized protein	Probable heat shock protein	Ribosome-associated heat shock protein	Putative uncharacterized protein	Heat shock protein	Probable heat shock protein Hsp15	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit	Putative heat shock protein 15	putative heat shock protein 15	Heat shock protein 15	identified by match to PFAM protein family HMM PF01479 S4 domain protein	Putative uncharacterized protein	pseudo	Putative heat shock protein	Heat shock protein 15	Heat shock protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL HEAT SHOCK-LIKE PROTEIN	Heat shock protein 15	Putative heat shock protein	Heat shock protein 15	Putative uncharacterized protein	Heat shock protein 15	Putative heat shock protein	HEAT SHOCK PROTEIN 15	Putative uncharacterized protein VP0131	Putative RNA-binding heat shock protein	
ECOLI03271	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	Heat shock protein HSP33	33 kDa chaperonin	Heat shock protein	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	Heat shock protein HSP33	33 kDa chaperonin	Chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	33 kDa chaperonin	
ECOLI03272	Uncharacterized protein yhgE	Putative uncharacterized protein	Putative membrane protein	Hypothetical protein yhgE	Putative membrane protein	Putative transport	Residues 1 to 574 of 574 are 95 pct identical to residues 1 to 574 of a 574 aa protein from Escherichia coli K12 ref: NP_417861.1 putative transport	Putative uncharacterized protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	putative transport	putative transport	conserved hypothetical protein	Putative membrane protein	hypothetical protein	hypothetical protein	Putative transport	conserved hypothetical protein; putative membrane protein Evidence 4 : Homologs of previously reported genes of unknown function	putative transport	putative inner membrane transport protein	conserved hypothetical protein KEGG: mfa:Mfla_0595 hypothetical protein	Uncharacterized conserved protein	hypothetical protein	Inner membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative transporter-like membrane protein	
ECOLI03273	Phosphoenolpyruvate carboxykinase	phosphoenolpyruvate carboxykinase;	Phosphoenolpyruvate carboxykinase, key enzyme in gluconeogenesis, catalyzes early reaction in carbohydrate biosynthesis, glucose represses transcription and accelerates mRNA degradation, regulated by Mcm1p and Cat8p, located in the cytosol. [Source:SGD;Acc:S000001805]	highly similar to sp|P10963 Saccharomyces cerevisiae YKR097w PCK1 phosphoenolpyruvate carboxykinase, hypothetical start	gi|3914406|sp|O43112|PPCK_KLULA Kluyveromyces lactis Phosphoenolpyruvate carboxykinase [ATP], start by similarity	phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	highly similar to uniprot|P10963 Saccharomyces cerevisiae YKR097w PCK1;	DEHA2E18568p;similar to uniprot|P10963 Saccharomyces cerevisiae YKR097W PCK1 Phosphoenolpyruvate carboxykinase key enzyme in gluconeogenesis catalyzes early reaction in carbohydrate biosynthesis glucose represses transcription and accelerates mRNA degradation regulated by Mcm1p and Cat8p located in the cytosol;	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	putative phosphoenolpyruvate carboxykinase	Phosphoenolpyruvate carboxykinase	identified by match to protein family HMM PF01293; match to protein family HMM TIGR00224 phosphoenolpyruvate carboxykinase (ATP)	similar to GB:X06182, GB:S68472, GB:X65959, GB:X69301, GB:X69302, GB:X69303, GB:X69304, GB:X69305, GB:X69306, GB:X69307, GB:X69308, GB:X69309, GB:X69310, GB:X69311, GB:X69312, GB:X69313, GB:X69314, GB:X69315, GB:X69316, GB:X72595, GB:X72599, SP:P10721, PID:34087, and PID:825686; identified by sequence similarity; putative phosphoenolpyruvate carboxykinase (ATP)	Phosphoenolpyruvate carboxykinase	go_component: cytosol [goid 0005829]; go_function: phosphoenolpyruvate carboxykinase (ATP) activity [goid 0004612]; go_process: gluconeogenesis [goid 0006094] phosphoenolpyruvate carboxykinase, putative	Phosphoenolpyruvate carboxykinase	
ECOLI03274	Osmolarity sensor protein envZ	Sensor protein	Osmolarity sensor protein envZ	Sensor protein	putative sensor outer membrane protein EnvZ	Osmolarity sensor protein envZ	Sensor protein	Sensor protein	pseudo	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	SCE25.03c, probable two-component system histidine kinase, len: 424 aa; similar to TR:O86661 (EMBL:AL031182) Streptomyces coelicolor putative two-component sensor SC4A2.05, 436 aa; fasta scores: opt: 486 z-score: 535.4 E(): 2.3e-22; 31.8% identity in 450 aa overlap. Contains Pfam match to entry PF00512 signal, Histidine kinase.  Contains possible hydrophobic membrane spanning regions putative two-component system histidine kinase	Sensor protein	Residues 1 to 450 of 450 are 100 pct identical to residues 1 to 450 of a 450 aa protein from Escherichia coli K12 ref: NP_417863.1 protein histidine kinase-phosphatase sensor for OmpR, modulates expression of ompF and ompC	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	IPR001092: Basic helix-loop-helix dimerization domain bHLH; IPR003594: ATP-binding region, ATPase-like; IPR003660: Histidine kinase, HAMP region;IPR003661: Histidine kinase A, N-terminal;IPR004358: Bacterial sensor protein, C-terminal;IPR005467: Histidine kinase sensory histidine kinase in two-component regulatory system with OmpR	similar to Salmonella typhi CT18 two-component sensor kinase EnvZ two-component sensor kinase EnvZ	Sensor protein	Sensor protein	two-component sensor histidine kinase	
ECOLI03275	Transcriptional regulatory protein ompR	Transcriptional regulatory protein ompR	putative transcriptional regulator OmpR	Transcriptional regulatory protein ompR	Transcriptional regulator OmpR,	Transcriptional regulatory protein OmpR	Two-component osmolarity response regulator	DNA-binding response regulator OmpR	Transcriptional regulator OmpR	Transcriptional regulatory protein ompR	Transcriptional regulator OmpR	Residues 6 to 244 of 244 are 100 pct identical to residues 1 to 239 of a 239 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289945.1 response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis	Transcriptional regulatory protein	Two-component response regulator	Response regulator OmpR	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal Transcriptional regulatory protein ompR	similar to Salmonella typhi CT18 two-component response regulator OmpR two-component response regulator OmpR	Transcriptional regulatory protein	transcriptional regulatory protein OmpR	Response regulator (CheY, wHTH domains)	Transcriptional regulatory protein ompR	Transcriptional regulatory protein similar to OmpR	identified by similarity to SP:P03025; match to protein family HMM PF00072; match to protein family HMM PF00486 transcriptional regulatory protein OmpR	identified by similarity to SP:P03025; match to protein family HMM PF00072; match to protein family HMM PF00486 DNA-binding response regulator OmpR	Response regulator receiver:Transcriptional regulatory protein, C-terminal	sensor; EnvZ; Code: TK; COG: COG0745 response regulator	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12767831, 12453215; Product type r : regulator response regulator in two-component regulatory system with EnvZ, regulates ompF and ompC expression (OmpR family)	response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis; Code: TK; COG: COG0745 OmpR	two-component regulatory protein	
ECOLI03276	Transcription elongation factor greB	Transcription elongation factor greB	Transcription elongation factor greB	Transcription elongation factor greB	Transcription elongation factor greB	Transcription elongation factor greB	Transcription elongation factor greB	Transcription elongation factor greB	Transcription elongation factor	putative transcription elongation factor GreB	GreB protein	Transcription elongation factor greB	Transcription elongation factor greB	Transcription elongation factor	Transcription elongation factor	Transcription elongation factor GreB	Transcription elongation factor	Transcription elongation factor greB	Transcription elongation factor	Transcription elongation factor GreB	Transcription elongation factor greB	Transcription elongation factor greB	transcription elongation factor greA	Transcription elongation factor	Transcription elongation factor greB	Residues 1 to 170 of 170 are 98 pct identical to residues 1 to 170 of a 170 aa protein from Escherichia coli  (strain K-12) pir: A65136 transcription elongation factor greb	Transcription elongation factor greB	Prokaryotic transcription elongation factor GreA/GreB	Probable transcription elongation factor (Transcript cleavage factor) protein	
ECOLI03277	Protein yhgF	Transcription accessory protein	S1 RNA binding domain protein	Transcription-related protein	Transcription-related protein	Uncharacterized protein HI0568	Putative RNA binding protein with S1 RNA-binding domain	Putative transcription accessory protein	RNA binding S1	Putative uncharacterized protein CPE2168	S1 RNA binding domain protein	Uncharacterized protein NMB0075	Putative uncharacterized protein	Putative uncharacterized protein	Transcriptional accessory protein	Putative uncharacterized protein	Putative transcription accessory protein	Alr5249 protein	S1 RNA binding domain protein	Lmo0898 protein	Predicted RNA binding protein, contains S1 domain	Putative RNA binding protein with S1 RNA-binding domain	Transcription accessory protein	Probable transcription accessory protein, S1 RNA- binding domain	Putative transcription accessory protein	conserved hypothetical protein	Putative RNA binding protein with S1 RNA-binding domain	Protein yhgF	Putative transcriptional regulator	
ECOLI03278	Ferrous iron transport protein A	Fe2+ transport system protein A	Putative ferrous iron transport protein	putative ferrous iron transport protein A	Ferrous iron transport protein A	Ferrous iron transport protein A	Ferrous iron transport protein A	Fe2+ transport system protein A	Residues 1 to 75 of 75 are 98 pct identical to residues 1 to 75 of a 75 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289948.1 ferrous iron transport protein A	Hypothetical ferrous iron transport protein A	iron(II) transport protein A	Ferrous iron transport protein A	ferrous iron transporter A	conserved gene ferrous iron transporter A	ferrous iron transporter A	IPR007167: FeoA ferrous iron transport protein A	similar to Salmonella typhi CT18 putative ferrous iron transport protein putative ferrous iron transport protein	Putative uncharacterized protein feoA	Ferrous iron transport protein A	Code: P; COG: COG1918 ferrous iron transport protein A	ferrous iron transport protein A	Code: P; COG: COG1918 ferrous iron transport protein A	ferrous iron transport protein A	Code: P; COG: COG1918 ferrous iron transport protein A	FeoA	Ferrous iron transport protein A	Hypothetical ferrous iron transport protein A	Ferrous iron transport protein A	Hypothetical ferrous iron transport protein A	
ECOLI03279	Ferrous iron transport protein B	Ferrous ion uptake system subunit, predicted GTPase	661aa long hypothetical ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transporter	Probable ferrous iron transport protein	Fe2+ transport system protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Ferrous iron transport protein B	Fe2+ transport system protein B	Ferrous iron transport protein B	Residues 5 to 777 of 777 are 99 pct identical to residues 1 to 773 of a 773 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289949.1 ferrous iron transport protein B	Ferrous iron transport protein B	iron(II) transport protein B	Ferrous iron transport protein B	ferrous iron transporter B	conserved gene ferrous iron transporter B	ferrous iron transporter B	Ferrous iron transport protein B	IPR003373: Ferrous iron transport protein B; IPR005225: Small GTP-binding protein domain; IPR005289: GTP-binding domain FeoB family, ferrous iron transport protein B	
ECOLI03280	Ferrous iron transport protein C	Hypothetical protein yhgG	Ferrous iron transport protein C	Residues 4 to 81 of 81 are 98 pct identical to residues 1 to 78 of a 78 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289950.1 orf, conserved hypothetical protein	Ferrous iron transport protein C	Ferrous iron transport protein C	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Ferrous iron transport protein C	Ferrous iron transport protein C	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Ferrous iron transport protein C	Hypothetical protein	Ferrous iron transport protein C	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Ferrous iron transport protein C	Ferrous iron transport protein C	Putative uncharacterized protein	Ferrous iron transport protein C	Putative uncharacterized protein	Predicted DNA-binding transcriptional regulator	Ferrous iron transport protein C	Ferrous iron transport protein C	Ferrous iron transport protein C	
ECOLI03281	Uncharacterized protein yhgA	Hypothetical protein yhgA	Putative uncharacterized protein yhgA	Residues 1 to 292 of 295 are 98 pct identical to residues 1 to 292 of a 292 aa protein from Escherichia coli K12 ref: NP_417870.1 orf, conserved hypothetical protein	Code: S; COG: COG5464 conserved hypothetical protein	Code: S; COG: COG5464; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhgA	conserved hypothetical protein Code: S; COG: COG5464	conserved hypothetical protein	Putative transposase, YhgA	Putative transposase, YhgA	Putative transposase YhgA family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative transposase, YhgA	Putative transposase, YhgA	Putative uncharacterized protein	Putative transposase	Putative transposase	Putative transposase	pseudo	Putative transposase	Predicted transposase	Putative transposase	YhgA protein	Predicted transposase	Predicted transposase	conserved predicted protein IS?	
ECOLI03282	Carboxylesterase bioH	Non-heme peroxidase, putative	Carboxylesterase bioH	Carboxylesterase bioH	Carboxylesterase	Putative carboxylase	Carboxylesterase bioH	Probable biotin biosynthesis protein bioH	Carboxylesterase bioH	3-oxoadipate enol-lactone hydrolase/4- carboxymuconolactone decarboxylase	Carboxylesterase bioH	Alpha/beta hydrolase family protein	putative bioH protein	Carboxylesterase bioH	carboxylesterase	Carboxylesterase bioH	Carboxylesterase bioH	Carboxylesterase bioH	BioH protein	pimeloyl-CoA synthesis (biotin biosynthesis)	Putative hydrolase	Carboxylesterase bioH	Carboxylesterase bioH	Carboxylesterase	Predicted hydrolases or acyltransferases	Carboxylesterase bioH	Residues 1 to 240 of 246 are 99 pct identical to residues 17 to 256 of a 256 aa protein from Escherichia coli K12 ref: NP_417871.1 biotin biosynthesis; reaction prior to pimeloyl CoA	Carboxylesterase bioH	Carboxylesterase bioH	
ECOLI03283	Protein gntX	Competence protein F, putative	Competence protein F	Competence protein F	Competence protein F	Putative amidophosphoribosyl-transferase	Competence protein	Putative uncharacterized protein	Competence protein F	Competence protein	ComF	Probable phosphoribosyl transferase	Predicted amidophosphoribosyltransferase	Competence protein ComF, putative	Competence protein F	Protein gntX	Alr2926 protein	Related to competence protein F	Putative amidophosphoribosyl-transferase	Putative uncharacterized protein	hypothetical ComF-related protein	Protein gntX	similar to GB:K03208, GB:K02577, GB:K02578, SP:P02811, SP:P02812, SP:P04280, SP:P04281, SP:P10162, and PID:190510; identified by sequence similarity; putative competence protein F, putative	ComF family protein	ComF-related protein	Putative uncharacterized protein	Putative uncharacterized protein	Competence protein ComF	Putative uncharacterized protein	
ECOLI03284	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Protein gntY	Fe/S biogenesis protein nfuA	conserved hypothetical protein	Protein gntY	Fe/S biogenesis protein nfuA	Protein gntY	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Residues 1 to 191 of 191 are 100 pct identical to residues 1 to 191 of a 191 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289954.1 orf, conserved hypothetical protein	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	IPR000361: Protein of unknown function, HesB/YadR/YfhF; IPR001075: Nitrogen-fixing NifU, C-terminal putative Thioredoxin-like proteins and domain	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Fe/S biogenesis protein nfuA	Fe/S biogenesis protein nfuA	
ECOLI03285	High-affinity gluconate transporter	High-affinity gluconate transporter	High-affinity gluconate transporter	High-affinity gluconate transporter	High-affinity transport of gluconate , gluconate permease	Residues 1 to 438 of 438 are 99 pct identical to residues 1 to 438 of a 438 aa protein from Escherichia coli O157:H7 ref: NP_312284.1 high-affinity transport of gluconate - gluconate permease	Putative gluconate permease	IPR003474: Gluconate transporter GntP family, high-affinity gluconate permease in GNT I system	similar to Salmonella typhi CT18 high-affinity gluconate transporter high-affinity gluconate transporter	Putative indonate/gluconate permease, GntP family	High-affinity gluconate permease in GNT I system	Gluconate permease	Code: GE; COG: COG2610 high-affinity transport permease for gluconate	Code: GE; COG: COG2610 high-affinity transport of gluconate/gluconate permease	high-affinity gluconate transport protein	Code: GE; COG: COG2610 high-affinity transport of gluconate/gluconate permease	High-affinity gluconate transporter	Putative gluconate permease	High-affinitygluconate permease	gluconate transporter TIGRFAM: gluconate transporter PFAM: Gluconate transporter KEGG: csa:Csal_0925 gluconate transporter	H+/gluconate symporter related permease	Gluconate permease	Gluconate transport protein	Putative gluconate permease precursor	high-affinity transport of gluconate / gluconate permease Code: GE; COG: COG2610	Gluconate permease	high-affinity transport permease for gluconate	Gluconate transporter	High-affinity gluconate permease in GNT I system	
ECOLI03286	4-alpha-glucanotransferase	Putative 4-alpha-glucanotransferase	Putative uncharacterized protein	4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	Putative glucanotransferase	putative 4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	4-alpha-glucanotransferase	Putative glucanotransferase	4-alpha-glucanotransferase	similar to AX065283-1|CAC25881.1| percent identity: 77 in 708 aa putative 4-alpha-glucanotransferase	SC8E4A.19c, probable 4-alpha-glucanotransferase, len: 711 aa; similar to SW:MALQ_MYCTU (EMBL:AL022021) Mycobacterium tuberculosis 4-alpha-glucanotransferase (EC 2.4.1.25) MalQ, 724 aa; fasta scores: opt: 2038 z-score: 2288.0 E(): 0; 47.9% identity in 727 aa overlap and to SW:MALQ_ECOLI (EMBL:M32793) Escherichia coli 4-alpha-glucanotransferase (EC 2.4.1.25) MalQ, 694 aa; fasta scores: opt: 979 z-score: 1098.2 E(): 0; 33.3% identity in 654 aa overlap putative 4-alpha-glucanotransferase	4-alpha-glucanotransferase	Residues 1 to 694 of 694 are 99 pct identical to residues 1 to 694 of a 694 aa protein from Escherichia coli K12 ref: NP_417875.1 4-alpha-glucanotransferase (amylomaltase)	4-alpha-glucanotransferase	Probable 4-alpha-glucanotransferase (Amylomaltase) protein	4-alpha-glucanotransferase	Putative uncharacterized protein	4-alpha-glucanotransferase	
ECOLI03287	Maltodextrin phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	putative maltodextrin phosphorylase	Maltodextrin phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	SC3D11.01, glgP, possible glycogen phosphorylase, len: >201aa; previously sequenced as TR:O70011 (EMBL:AJ001205). Also similar to TR:Q9YGA7 (EMBL:AF115479) maltodextrin phosphorylase from Thermococcus litoralis (831 aa) fasta scores; opt: 242, z-score: 283.2, E(): 2.3e-08, 30.9% identity in 194 aa overlap.  SC6A11.20, glgP, possible glycogen phosphorylase (fragment), len: >705 aa; previously sequenced as TR:O70011 (EMBL:AJ001205). Also similar to TR:Q9YGA7 (EMBL:AF115479) maltodextrin phosphorylase from Thermococcus litoralis (831 aa) fasta scores; opt: 849, z-score: 972.3, E(): 0, 40.5% identity in 699 aa overlap.  Contains Prosite match to PS00102 Phosphorylase pyridoxal-phosphate attachment site putative glycogen phosphorylase	Phosphorylase	Residues 1 to 797 of 797 are 99 pct identical to residues 1 to 797 of a 797 aa protein from Escherichia coli gb: AAA58215.1 maltodextrin phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	IPR000811: Glycosyl transferase, family 35 maltodextrin phosphorylase	similar to Salmonella typhi CT18 maltodextrin phosphorylase maltodextrin phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	
ECOLI03288	HTH-type transcriptional regulator malT	HTH-type transcriptional regulator malT	putative malT regulatory protein	HTH-type transcriptional regulator malT	Putative transcriptional regulator	HTH-type transcriptional regulator malT	Regulatory protein related to malT, positive regulator of mal regulon	Transcriptional regulator, LuxR family	HTH-type transcriptional regulator malT	HTH-type transcriptional regulator malT	HTH-type transcriptional regulator malT	IPR000792: Bacterial regulatory protein, LuxR family transcriptional activator of the mal genes, binds inducer (maltotriose) and ATP (LysR familiy)	similar to Salmonella typhi CT18 MalT regulatory protein MalT regulatory protein	HTH-type transcriptional regulator malT	ATP-dependent transcriptional regulator MalT protein	HTH-type transcriptional regulator malT	Code: K; COG: COG2909 positive regulator of mal regulon	Code: K; COG: COG2909 positive regulator of mal regulon	maltose regulon positive regulatory protein MalT ATP-dependent transcriptional regulator; COG2909	Code: K; COG: COG2909 positive regulator of mal regulon	HTH-type transcriptional regulator malT	Maltose regulon positive regulatory protein	ATP-dependent transcriptional regulator-like protein	HTH-type transcriptional regulator malT	ATP-dependent transcriptional regulator, MalT-like, LuxR family	Maltose regulon positive regulatory protein	Maltose regulon positive regulatory protein	ATP-dependent transcriptional regulator	positive regulator of mal regulon Code: K; COG: COG2909	
ECOLI03289	RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	hypothetical RNA 3'-terminal phosphate cyclase	RNA 3'-terminal phosphate cyclase	RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	PMID: 9184239 PMID: 9738023 PMID: 10673421 PMID: 9738023 best DB hits: BLAST: pir:E83072; RNA 3'-terminal phosphate cyclase PA4585 [imported] -; E=4e-56 pdb:1QMH; B Chain B, Crystal Structure Of Rna 3'-Terminal; E=9e-53 swissprot:P46849; RTCA_ECOLI RNA 3'-TERMINAL PHOSPHATE CYCLASE; E=4e-52 COG: PA4585; COG0430 RNA phosphate cyclase; E=4e-57 PFAM: PF01137; RNA 3'-terminal phosphate cycl; E=7e-63 RNA 3-terminal phosphate cyclase (RNA-3-phosphate cyclase)	RNA 3'-terminal phosphate cyclase	Residues 1 to 339 of 339 are 97 pct identical to residues 1 to 339 of a 347 aa protein pdb: 1QMH Chain B, Crystal Structure Of Rna 3'-Terminal Phosphate Cyclase, An Ubiquitous Enzyme With Unusual Topology	RNA 3'-terminal phosphate cyclase	Probable RNA 3'-terminal phosphate cyclase	IPR000228: RNA 3'-terminal phosphate cyclase RNA 3'-terminal phosphate cyclase (with b3419)	Probable RNA 3'-terminal phosphate cyclase	RNA 3'-terminal phosphate cyclase	RNA 3'-terminal phosphate cyclase	identified by match to protein family HMM PF01137 RNA 3'-terminal phosphate cyclase	
ECOLI03290	Protein rtcB	Putative uncharacterized protein	Protein rtcB	Putative uncharacterized protein	Putative uncharacterized protein	Lmo0257 protein	Uncharacterized ACR	Putative uncharacterized protein	Putative uncharacterized protein	Protein rtcB	unknown	identified by match to protein family HMM PF01139 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein rtcB	similar to AE006716-6|AAK41240.1| percent identity: 29 in 380 aa conserved hypothetical protein	Putative uncharacterized protein	BH1789 protein	Residues 1 to 408 of 408 are 98 pct identical to residues 1 to 408 of a 408 aa protein from Escherichia coli K12 ref: NP_417879.1 orf, conserved hypothetical protein	Rtcb protein	Protein RtcB	Rtcb protein	conserved hypothetical protein	IPR001233: Protein of unknown function UPF0027 putative cytoplasmic protein	identified by similarity to GP:4678913; match to protein family HMM PF01139 conserved hypothetical protein	, predicted protein, len = 352 aa, conserved hypothetical protein; predicted pI = 6.7818; good similarity to many bacterial hypothetical proteins; contains a uncharacterized protein family UPF0027 pfam domain across the whole length of the protein hypothetical protein, conserved	Similar to Bacteroides thetaiotaomicron protein RtcB BT1455 SWALL:AAO76562 (EMBL:AE016931) (465 aa) fasta scores: E(): 7.2e-152, 82.58% id in 465 aa, and to Deinococcus radiodurans RtcB protein DR0430 SWALL:Q9RX85 (EMBL:AE001902) (470 aa) fasta scores: E(): 9.9e-74, 48.82% id in 467 aa conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	
ECOLI03292	Glycerol-3-phosphate regulon repressor	Glycerol-3-phosphate regulon repressor	GlpR	Transcriptional regulator of sugar metabolism	Transcriptional regulator, DeoR family	Glycerol-3-phosphate regulon repressor	putative glycerol-3-phosphate repressor protein	Glycerol-3-phosphate regulon repressor	Transcriptional regulator, DeoR family	Glycerol-3-phosphate regulon repressor protein	Glycerol-3-phosphate regulon repressor protein	Glycerol-3-phosphate regulon repressor	Glycerol-3-phosphate regulon repressor	Glycerol-3-phosphate regulon repressor protein	Transcriptional regulator, DeoR family	Repressor of the glp operon	Transcriptional regulator of sugar metabolism	Residues 1 to 252 of 252 are 100 pct identical to residues 1 to 252 of a 252 aa protein from Escherichia coli K12 ref: NP_417881.1 repressor of the glp operon	Glycerol-3-phosphate repressor protein	Probable glycerol-3-phosphate regulon repressor transcription regulator protein	Glycerol-3-phosphate regulon repressor	Glycerol-3-phosphate transcriptional regulator protein	IPR001034: Bacterial regulatory protein, DeoR family transcriptional repressor of the glp operon (DeoR family)	similar to Salmonella typhi CT18 glycerol-3-phosphate regulon repressor glycerol-3-phosphate regulon repressor	Glycerol-3-phosphate repressor protein	glycerol-3-phosphate regulon repressor	Similar to: HI0619, GLPR_HAEIN glycerol-3-phosphate regulon repressor	Transcriptional regulators of sugar metabolism GlpR protein	Glycerol-3-phosphate regulon repressor	
ECOLI03291	Transcriptional regulatory protein rtcR	Transcriptional Regulatory protein rtcR	PMID: 9738023 best DB hits: BLAST: pir:C83074; transcription regulator RtcR PA4581 [imported] -; E=1e-163 swissprot:P38035; RTCR_ECOLI TRANSCRIPTIONAL REGULATORY PROTEIN; E=1e-162 gb:AAA58220.1; (U18997) ORF_o532 [Escherichia coli]; E=1e-161 COG: rtcR_2; COG1221 NtrC family transcriptional regulators, ATPase; E=1e-111 atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-38 aq_218_2; COG1221 NtrC family transcriptional regulators, ATPase; E=3e-37 PFAM: PF00004; ATPase family associated with variou; E=0.29 PF00158; Sigma-54 interaction domain; E=4e-84 transcription regulator RtcR	Putative 2-component regulator	Residues 1 to 532 of 532 are 98 pct identical to residues 1 to 532 of a 532 aa protein from Escherichia coli K12 ref: NP_417880.1 putative 2-component regulator	Probable sigma-54 interacting transcription regulator protein	identified by similarity to SP:P38035; match to protein family HMM PF00158 transcriptional regulator RtcR	Transcriptional regulatory protein rtcr	Sigma-54 interacting transcription regulator protein	IPR002078: Sigma-54 factor interaction domain; IPR003593: AAA ATPase sigma N (sigma 54)-dependent regulator of rtcBA expression (EBP familiy)	Sigma N (Sigma 54)-dependent regulator of rtcBA expression	identified by similarity to SP:P38035; match to protein family HMM PF00158 sigma-54 dependent transcriptional regulator RtcR	Sigma 54 interactive regulator of RNA terminal phosphate cyclase	Code: KT; COG: COG4650 putative 2-component regulator	transcriptional regulator (sigma54-dependent regulator)	Regulator of RNA terminal phosphate cyclase	Sigma54-dependent transcriptional regulator RtcR	sigma54-dependent transcription regulator RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain; COG4650	Regulator of RNA terminal phosphate cyclase	regulator of RNA terminal phosphate cyclase	Transcriptional regulatory protein RtcR	Transcriptional regulator RtcR	regulator of RNA terminal phosphate cyclase	regulator of RNA terminal phosphate cyclase PFAM: sigma-54 factor, interaction domain-containing protein; regulator of RNA terminal phosphate cyclase; ATPase associated with various cellular activities, AAA_5 SMART: AAA ATPase KEGG: bur:Bcep18194_B2415 sigma54-dependent transcriptional regulator RtcR	Regulator of RNA terminal phosphate cyclase	regulator of RNA terminal phosphate cyclase PFAM: sigma-54 factor, interaction domain-containing protein; regulator of RNA terminal phosphate cyclase; ATPase associated with various cellular activities, AAA_5 SMART: AAA ATPase KEGG: bcn:Bcen_4669 regulator of RNA terminal phosphate cyclase	sigma-54 dependent transcriptional regulator RtcR identified by similarity to SP:P38035; match to protein family HMM PF00158; match to protein family HMM PF06956	transcriptional regulatory protein RtcR	sigma-54 dependent transcriptional regulator RtcR Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9738023; Product type r : regulator	
ECOLI03293	Rhomboid protease glpG	Membrane protein, rhomboid protein homolog	Putative uncharacterized protein PF1228	Small hydrophobic molecule transporter protein, putative	GlpG	Putative uncharacterized protein	Uncharacterized membrane protein	Rhomboid protease glpG	hypothetical GlpG protein	Protein glpG	GlpG protein	GlpG protein	Rhomboid protease glpG	PMID: 11206551 best DB hits: BLAST: gb:AAG58528.1; AE005565_3 (AE005565) protein of glp regulon; E=2e-08 swissprot:P54493; YQGP_BACSU HYPOTHETICAL 56.4 KD PROTEIN IN; E=1e-07 pir:A82363; glpG protein VC0099 [imported] - Vibrio cholerae (group; E=9e-07 COG: VC0099; COG0705 Uncharacterized membrane protein (homolog of; E=9e-08 PFAM: PF01694; Rhomboid family; E=3.4e-26 probable glpG protein	Rhomboid family protein	GlpG protein	Rhomboid protease glpG	Uncharacterized membrane protein	Residues 1 to 276 of 276 are 98 pct identical to residues 1 to 276 of a 276 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289967.1 protein of glp regulon	Rhomboid protease glpG	Rhomboid protease glpG	putative membrane protein	IPR002610: Rhomboid-like protein protein of glp regulon	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Rhomboid protease glpG	integral membrane protein (rhomboid family)	Similar to: HI0618, GLPG_HAEIN GlpG	Uncharacterized membrane protein (similar to Drosophila rhomboid) GlpG protein	Rhomboid protease glpG	
ECOLI03294	Thiosulfate sulfurtransferase glpE	Rhodanese-related sulfurtransferases	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	putative thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	hypothetical conserved protein	Putative uncharacterized protein	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	CDS_ID OB1901 hypothetical protein	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	Lin0618 protein	Residues 1 to 87 of 87 are 100 pct identical to residues 22 to 108 of a 108 aa protein from Escherichia coli K12 ref: NP_417883.1 protein of glp regulon	Thiosulfate sulfurtransferase glpE	Thiosulfate sulfurtransferase glpE	IPR001763: Rhodanese-like thiosulfate/cyanide sulfurtransferase (rhodanese)	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Thiosulfate sulfurtransferase glpE	identified by match to protein family HMM PF00581 rhodanese-like domain protein	thiosulfate sulfurtransferase GlpE	Similar to: HI0679, GLPE_HAEIN thiosulfate sulfurtransferase GlpE	
ECOLI03295	Aerobic glycerol-3-phosphate dehydrogenase	Putative glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Aerobic glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase, aerobic	GlpD protein	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Putative glycerol-3-phosphate dehydrogenase	putative aerobic glycerol-3-phosphate dehydrogenase	GlpD protein	Aerobic glycerol-3-phosphate dehydrogenase	identified by match to protein family HMM PF01266 glycerol-3-phosphate dehydrogenase, aerobic	similar to GP:4204897, and GP:4204897; identified by sequence similarity; putative erythritol phosphate dehydrogenase	Aerobic glycerol-3-phosphate dehydrogenase	Aerobic glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ERYTHRITOL PHOSPHATE DEHYDROGENASE PROTEIN	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	ERYTHRITOL-4-PHOSPHATE DEHYDROGENASE	Aerobic glycerol-3-phosphate dehydrogenase	sn-glycerol-3-phosphate dehydrogenase	CDS_ID OB2471 glycerol-3-phosphate dehydrogenase	glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	SCI52.03, probable glycerol-3-phosphate dehydrogenase, len: 538 aa; similar to SW:GLPD_BACSU (EMBL:M34393) Bacillus subtilis aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.99.5) GlpD, 555 aa; fasta scores: opt: 751 Z-score: 835.1 bits: 164.3 E(): 6.1e-39; 30.830% identity in 506 aa overlap. Contains Pfam match to entry PF01224 FAD_Gly3P_dh, FAD-dependent glycerol-3-phosphate dehydrogenase putative glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	
ECOLI03296	Putative uncharacterized protein yzgL	conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	
ECOLI03297	Glycogen phosphorylase	Phosphorylase	Glycogen phosphorylase	Glycogen phosphorylase	Phosphorylase	Phosphorylase	glycogen phosphorylase	Phosphorylase	CDS_ID OB0410 glycogen phosphorylase	Phosphorylase	Residues 1 to 815 of 815 are 100 pct identical to residues 1 to 815 of a 815 aa protein from Escherichia coli K12 ref: NP_417886.1 glycogen phosphorylase	Glycogen phosphorylase	Phosphorylase	Glycogen phosphorylase	InterProMatches:IPR000811; degrades starch and glycogen by phosphorylation,Molecular Function: phosphorylase activity (GO:0004645), Biological Process: carbohydrate metabolism (GO:0005975) glycogen phosphorylase/glycosyl transferase family 35	glycogen phosphorylase	IPR000811: Glycosyl transferase, family 35 glycogen phosphorylase	similar to Salmonella typhi CT18 glycogen phosphorylase glycogen phosphorylase	Similar to Prokaryotic and Eukaryotic glycogen phosphorylase including: Escherichia coli, and Shigella flexneri glycogen phosphorylase GlgP or GlgY SWALL:PHSG_ECOLI (SWALL:P13031) (815 aa) fasta scores: E(): 1e-155, 47.46% id in 809 aa and Homo sapiens glycogen phosphorylase, brain form PygB SWALL:PHS3_HUMAN (SWALL:P11216) (843 aa) fasta scores: E(): 3.2e-175, 53.62% id in 813 aa glycogen phosphorylase	Phosphorylase	Phosphorylase	Phosphorylase	go_component: cytoplasm [goid 0005737]; go_function: glycogen phosphorylase activity [goid 0008184]; go_process: glycogen catabolism [goid 0005980] glycogen phosphorylase 1; possible glycogen phosphorylase	identified by similarity to SP:P13031; match to protein family HMM PF00343; match to protein family HMM TIGR02093 glycogen phosphorylase	Code: G; COG: COG0058 glycogen phosphorylase	COG0058, GlgP, Glucan phosphorylase; pfam00343, phosphorylase, Carbohydrate phosphorylase. The members of this family catalyse the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, etc Citation: PMID: 10729189 (from R. sphaeroides 2.4.1).  MEDLINE 88330897 (ortholog from E. coli) glycogen phosphorylase	Code: G; COG: COG0058 glycogen phosphorylase	
ECOLI03298	Glycogen synthase	Glycogen synthase	Glycogen synthase 1	Glycogen synthase	Putative uncharacterized protein PH0069	Glycogen synthase	GlgA glycogen synthase	Glycogen synthase	Glycogen synthase	Glycogen synthase	Glycogen synthase	Glycogen synthase	Glycogen synthase	Glycogen synthase	Glycogen synthase	Glycogen synthase	Glycogen synthase 1	Glycogen synthase	Predicted glycosyltransferases	Glycogen synthase	Glycogen synthase	putative glycogen synthase	Glycogen synthase	Glycogen synthase	identified by match to protein family HMM PF00534 glycogen synthase	Glycogen synthase	Glycogen synthase	Glycogen synthase	PMID: 10360571 PMID: 3097003 best DB hits: BLAST: pir:H72321; glycogen synthase - Thermotoga maritima (strain MSB8); E=6e-79 gb:AAK04797.1; AE006303_3 (AE006303) glycogen synthase (EC; E=1e-77 swissprot:O08328; GLGA_BACST GLYCOGEN SYNTHASE (STARCH [BACTERIAL; E=2e-76 COG: TM0895; COG0297 Glycogen synthase; E=6e-80 BH1415_2; COG0438 Predicted glycosyltransferases; E=6e-10 PH0069; COG0297 Glycogen synthase; E=7e-09 PFAM: PF00534; Glycosyl transferases group 1; E=8.9e-10 glycogen synthase	
ECOLI03299	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase 2	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	identified by similarity to SP:P39122; match to protein family HMM PF00483 glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase 2	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	PMID: 11208782 best DB hits: BLAST: gb:AAB93540.1; (AF016923) ADP-glucose pyrophosphorylase [Thermus; E=1e-103 pir:C82428; glucose-1-phosphate adenylyltransferase VCA0699; E=1e-102 embl:CAC17471.1; (AJ291603) ADP glucose pyrophosphorylase; E=9e-99 COG: VCA0699; COG0448 ADP-glucose pyrophosphorylase; E=1e-103 MTH1759; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases; E=9e-20 BH1086; COG0448 ADP-glucose pyrophosphorylase; E=3e-14 PFAM: PF00483; Nucleotidyl transferase; E=5.7e-74 ADP-glucose pyrophosphorylase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE (ADP-GLUCOSE SYNTHASE)(ADP-GLUCOSE PYROPHOSPHORYLASE) PROTEIN	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase 2	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	CDS_ID OB0407 glucose-1-phosphate adenylyltransferase	glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	Glucose-1-phosphate adenylyltransferase	
ECOLI03300	Glycogen debranching enzyme	Glycogen operon protein glgX homolog	Glgx	Type II secretory pathway, pullulanase	Glycogen debranching enzyme	Pullulanase	putative glycogen protein GlgX	Glycogen debranching enzyme	Glycogen operon protein GlgX	Glycogen debranching enzyme	Putative glycogen debranching enzyme	Glycogen debranching enzyme	SC3D11.13c, glgX2, possible glycosyl hydrolase (putative secreted protein), len: 782 aa; similar to many eg. TR:Q9X947 (EMBL:AJ001206) putative glycogen debranching enzyme from Streptomyces coelicolor (715 aa) fasta scores; opt: 2630, z-score: 2693.4, E(): 0, 58.5% identity in 725 aa overlap and SW:P15067 (GLGX_ECOLI) glycogen operon protein from Escherichia coli (657 aa) fasta scores; opt: 1608, z-score: 1647.7, E(): 0, 47.2% identity in 669 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase, Alpha amylase. Contains possible N-terminal region signal peptide sequence putative glycosyl hydrolase (putative secreted protein)	Type II secretory pathway protein	Residues 1 to 657 of 657 are 99 pct identical to residues 1 to 657 of a 657 aa protein from Escherichia coli K12 ref: NP_417889.1 part of glycogen operon, a glycosyl hydrolase, debranching enzyme	Glycogen debranching enzyme	Glycogen operon protein glgX homolog	Mb1591c, treX, len: 721 aa. Equivalent to Rv1564c, len: 721 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 721 aa overlap). Probable treX (previously called glgX), Maltooligosyltrehalose synthase.  Strong similarity to D83245|g1890053 treX, glycogen debranching enzyme (glgX) from Sulfolobus acidocaldarius (713 aa), FASTA score: opt: 2396, E(): 0, (48.4% identity in 709 aa overlap); similar to GLGX_HAEIN|P45178 glycogen operon protein glgx (659 aa), FASTA scores: opt: 1512, E(): 0, (42.3% identity in 645 aa overlap). Maltooligosyltrehalose synthase TreX	IPR004193: Glycoside hydrolase, family 13, N-terminal; IPR006047: Alpha amylase, catalytic domain; IPR006589: Alpha amylase, catalytic subdomain glycosyl hydrolase	similar to Salmonella typhi CT18 glycogen operon protein glycogen operon protein	Glycogen debranching enzyme	isoamylase	Similar to: HI1358, GLGX_HAEIN glycogen operon protein GlgX	Pullulanase and related glycosidases GlgX protein	Glycogen debranching enzyme	Code: G; COG: COG1523 part of glycogen operon, a glycosyl hydrolase, debranching enzyme	part of glycogen operon, a glycosyl hydrolase, debranching enzyme; Code: G; COG: COG1523 GlgX	Alpha amylase, catalytic subdomain	Alpha amylase, catalytic subdomain	
ECOLI03301	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan branching enzyme;	Glycogen branching enzyme, involved in glycogen accumulation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern.  [Source:SGD;Acc:S000000737]	highly similar to tr|Q9P5P3 Neurospora crassa Probable branching enzyme (be1), hypothetical start	1,4-alpha-glucan-branching enzyme	highly similar to sp|P32775 Saccharomyces cerevisiae YEL011w GLC3 1, 4-glucan branching enzyme (glycogen branching enzyme) singleton, start by similarity	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	highly similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3;	DEHA2B01672p;similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 glycogen branching enzyme;	similar to GB:M33146, SP:P21291, PID:181064,  and PID:181071; identified by sequence similarity; putative 1,4-alpha-glucan branching enzyme	1,4-alpha-glucan branching enzyme	1,4-alpha-glucan-branching enzyme 2	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme 1	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	1,4-alpha-glucan-branching enzyme	
ECOLI03302	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	putative aspartate semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Residues 21 to 387 of 387 are 100 pct identical to residues 1 to 367 of a 367 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289978.1 aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	Aspartate-semialdehyde dehydrogenase	
ECOLI03303	UPF0056 inner membrane protein yhgN	Putative uncharacterized protein	Putative uncharacterized protein	similar to GB:U11020, PID:506786,  and SP:P50931; identified by sequence similarity; putative hypothetical protein	Putative uncharacterized protein	Multiple antibiotic transporter	MarC family integral membrane protein	putative membrane protein	UPF0056 membrane protein CPn_1010/CP_0843/CPj1010/CpB1048	Hypothetical protein yhgN	Putative uncharacterized protein	Membrane protein, MarC family	Putative uncharacterized protein	Conserved hypothetical integral membrane protein	Putative membrane protein	UPF0056 membrane protein BUsg_434	Membrane protein, MarC family	Putative membrane protein	UPF0056 inner membrane protein yhgN	Putative uncharacterized protein	MarC family integral membrane protein	UPF0056 membrane protein BU449	Multiple antibiotic transporter	Residues 1 to 197 of 197 are 100 pct identical to residues 1 to 197 of a 197 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289979.1 orf, conserved hypothetical protein	UPF0056 membrane protein CT_852	Putative membrane protein	YhgN protein	Putative multiple antibiotic resistance (Marc)- relateds transmembrane protein	Putative uncharacterized protein	
ECOLI03304	Low-affinity gluconate transporter	2-keto-3-deoxygluconate permease	Low-affinity gluconate transport permease protein, interrupted	identified by match to protein family HMM PF02447; match to protein family HMM TIGR00791 gluconate permease	Low-affinity gluconate transporter	CDS_ID OB2216 low-affinity gluconate transporter	Residues 1 to 446 of 446 are 99 pct identical to residues 1 to 446 of a 446 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289984.1 low affinity gluconate permease	Low-affinity gluconate transporter	IPR003474: Gluconate transporter low affinity gluconate permease	similar to Salmonella typhi CT18 low-affinity gluconate transporter low-affinity gluconate transporter	Low affinity gluconate permease	Code: GE; COG: COG2610 H+/gluconate symporter	Evidence 2b : Function of strongly homologous gene; PubMedId : 9658018; Product type t : transporter putative idonate or gluconate permease	Code: GE; COG: COG2610 H+/gluconate symporter	gluconate transporter	Code: GE; COG: COG2610 H+/gluconate symporter	Gluconate permease	Gluconate transporter precursor	Low-affinity gluconate transport permease protein	Low-affinity gluconate transporter identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791	Low-affinity gluconate transporter	Low-affinity gluconate transporter	gluconate transporter GntU, low affinity GNT 1 system	Gluconate transporter precursor	Gluconate transporter precursor	Gluconate transporter precursor	TIGRFAM: gluconate transporter PFAM: Gluconate transporter; Citrate transporter KEGG: pha:PSHAb0479 putative idonate or gluconate permease gluconate transporter	Putative low-affinity gluconate transporter	Gluconate transporter GntU	
ECOLI03305	Thermoresistant gluconokinase	Probable gluconokinase [Source:GeneDB_Spombe;Acc:SPAC4G9.12]	DEHA2F08646p;weakly similar to uniprot|Q03786 Saccharomyces cerevisiae YDR248C Hypothetical ORF;	Gluconokinase	Putative gluconokinase	Thermoresistant gluconokinase	go_component: cytoplasm [goid 0005737] cytoplasm protein, putative	Gluconokinase 2, thermoresistant	gluconokinase	Residues 8 to 182 of 182 are 98 pct identical to residues 1 to 175 of a 175 aa protein GNTK_ECOLI sp: P46859 thermoresistant gluconokinase (gluconate kinase 2)	Probable thermoresistant gluconokinase (Gluconate kinase 2) protein	Thermoresistant gluconokinase	IPR006001: Carbohydrate kinase, thermoresistant glucokinase gluconate kinase 2 in GNT I system, thermoresistant	similar to Salmonella typhi CT18 putative gluconokinase putative gluconokinase	COG3265 gluconate kinase	Gluconate kinase 2 in GNT I system	identified by similarity to SP:P46859; match to protein family HMM TIGR01313 gluconokinase, putative	carbohydrate kinase, thermoresistant glucokinase	thermoresistant; Code: G; COG: COG3265 gluconokinase 2	thermoresistant; Code: G; COG: COG3265 gluconokinase 2	putative gluconokinase	transcript_id=ENSDNOT00000012491	Gluconate kinase COG3265	Code: G; COG: COG3265 gluconokinase 2, thermoresistant	Carbohydrate kinase, thermoresistant glucokinase	Thermoresistant gluconokinase	Carbohydrate kinase, thermoresistant glucokinase	Thermoresistant gluconokinase	carbohydrate kinase, thermoresistant glucokinase family KEGG: bur:Bcep18194_A3749 carbohydrate kinase, thermoresistant glucokinase TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family PFAM: shikimate kinase	
ECOLI03306	HTH-type transcriptional regulator gntR	HTH-type transcriptional regulator gntR	Gluconate utilization system Gnt-I transcriptional repressor	Regulator of gluconate (Gnt) operon	Residues 1 to 331 of 331 are 100 pct identical to residues 1 to 331 of a 331 aa protein from Escherichia coli O157:H7 ref: NP_312314.1 regulator of gluconate operon	Gluconate utilization system Gnt-I transcriptional repressor	Repressor of gluconate (Gnt) operon	IPR000843: Bacterial regulatory protein LacI, HTH motif; IPR001761: Periplasmic binding protein/LacI transcriptional regulator transcriptional repressor gnt-I, gntUKR (GalR/LacI familiy)	similar to Salmonella typhi CT18 gluconate utilization operon repressor gluconate utilization operon repressor	Gluconate utilization system Gnt-I transcriptional repressor	Transcriptional regulators PurR protein	Transcriptional repressor gnt-I	Code: K; COG: COG1609 regulator of gluconate (gnt) operon	regulator of gnt operon; Code: K; COG: COG1609 regulator of gluconate operon	gluconate utilization operon repressor	Transcriptional regulator COG1609	regulator of gnt operon; Code: K; COG: COG1609 regulator of gluconate operon	Gluconate utilization operon gntUKR repressor GalR/LacI familiy	Gluconate utilization system Gnt-I transcriptional repressor	Gluconate utilization system GNT-I transcriptional repressor	Gluconate utilization system Gnt-I transcriptional repressor	Gluconate utilization system Gnt-I transcriptional repressor	regulator of gluconate (gnt) operon Code: K; COG: COG1609	Gluconate utilization system Gnt-I transcriptional repressor	DNA-binding transcriptional repressor	Transcriptional regulator, LacI family	Regulator of gluconate (Gnt) operon	Putative uncharacterized protein	Transcriptional regulator GntR	
ECOLI03307	Protein yhhW	Pirin-like protein sll1773	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	DUF209	Pirin-like protein PM1685	Putative uncharacterized protein STY4267	All1172 protein	Putative uncharacterized protein	Pirin	Pirin	Putative uncharacterized protein	Protein yhhW	identified by match to protein family HMM PF02678 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	glimmer prediction, start codon changed based on homology and codon usage pattern; global homology to hypothetical protein in E.coli (GI: 1176281) Conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	hypothetical conserved protein	Putative uncharacterized protein VPA0042	Protein yhhW	SC4A7.13c, hypothetical protein, len: 218 aa; similar to various hypothetical proteins, e.g.  TR:Y181_MYCTU (EMBL:Z97050) Mycobacterium tuberculosis hypothetical 26.3 kD protein MCTI28.21c, 244 aa; fasta scores: opt: 410 z-score: 496.1 E(): 3e-20; 39.0% identity in 236 aa overlap hypothetical protein	Residues 1 to 231 of 231 are 99 pct identical to residues 1 to 231 of a 231 aa protein from Escherichia coli K12 ref: NP_417896.1 orf, conserved hypothetical protein	Pirin-related protein	Similar to unknown protein YhhW of Escherichia coli	hypothetical protein	
ECOLI03308	Uncharacterized oxidoreductase yhhX	Oxidoreductase, Gfo/Idh/MocA family	Putative oxidoreductase	Oxidoreductase	Oxidoreductase, Gfo/Idh/MocA family	Putative oxidoreductase yhhX	identified by match to protein family HMM PF01408; match to protein family HMM PF02894 oxidoreductase, Gfo/Idh/MocA family	Putative regulator	Residues 1 to 285 of 286 are 99 pct identical to residues 60 to 344 of a 345 aa protein from Escherichia coli K12 ref: NP_417897.1 putative regulator	Oxidoreductase	IPR000683: Oxidoreductase, N-terminal; IPR004104: Oxidoreductase, C-terminal putative oxidoreductase	Putative oxidoreductase	oxidoreductase	Code: R; COG: COG0673 putative regulator	similar to gi|56421701|ref|YP_149019.1| [Geobacillus kaustophilus HTA426], percent identity 30 in 338 aa, BLASTP E(): 1e-37 putative lipopolysaccharide biosynthesis protein	Code: R; COG: COG0673 putative regulator	Code: R; COG: COG0673 putative regulator	putative GFO/IDH/MocA family oxidoreductase similarity:fasta; with=UniProt:Q92T67 (EMBL:SME591782); Rhizobium meliloti (Sinorhizobium meliloti).; PUTATIVE OXIDOREDUCTASE PROTEIN.; length=357; id 82.913; 357 aa overlap; query 1-357; subject 1-357	Putative oxidoreductase YhhX	Putative oxidoreductase YhhX	Oxidoreductase, NAD-binding cytoplasmic protein	oxidoreductase domain protein PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain KEGG: rba:RB5776 NADH-dependent dehydrogenase	Oxidoreductase, NAD-binding cytoplasmic protein	Predicted dehydrogenase	Predicted dehydrogenase related protein	Oxidoreductase, Gfo/Idh/MocA family	putative regulator Code: R; COG: COG0673	oxidoreductase-like PFAM: oxidoreductase-like Oxidoreductase-like KEGG: atc:AGR_pAT_7 hypothetical protein	putative oxidoreductase YhhX	
ECOLI03309	Uncharacterized N-acetyltransferase yhhY	Conserved protein	Acetyltransferase	Putative uncharacterized protein CPE0814	Putative uncharacterized protein	Putative uncharacterized protein	Histone acetyltransferase HPA2	Putative acetyltransferase	Acetyltransferase (GNAT) family protein	hypothetical acetyltransferase	Acetyltransferase, GNAT family	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	Acetyltransferase, GNAT family	hypothetical conserved protein	Acetyltransferase, GNAT family	Putative acetyltransferase	Putative uncharacterized protein yhhY	hypothetical protein, contains weak similarity to phosphinothricin acetyltransferase	Probable acetyltransferase	Histone acetyltransferase HPA2	Residues 1 to 162 of 162 are 99 pct identical to residues 1 to 162 of a 162 aa protein from Escherichia coli K12 ref: NP_417898.1 orf, conserved hypothetical protein	Putative uncharacterized protein	acetyltransferase, GNAT family	Acetyltransferase protein	Putative uncharacterized protein ylaG	IPR000182: GCN5-related N-acetyltransferase putative transferase	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	Putative uncharacterized protein gbs0354	conserved hypothetical protein	
ECOLI03310	Uncharacterized protein yhhZ	Code: S; COG: COG3157 conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	HNH endonuclease domain protein	Conserved protein	HNH endonuclease domain protein	HNH endonuclease domain protein	Putative uncharacterized protein	Putative uncharacterized protein yhhZ	Putative uncharacterized protein yhhZ	Putative uncharacterized protein yhhZ	pseudo	Putative uncharacterized protein yhhZ	YhhZ protein	Conserved protein	conserved predicted protein	Type VI secretion system effector, Hcp1 family	
ECOLI03311	Putative uncharacterized protein yrhA	Putative uncharacterized protein	Putative uncharacterized protein yrhA	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yrhA	Putative uncharacterized protein yrhA	Putative uncharacterized protein yrhA	Putative uncharacterized protein yrhA	Putative uncharacterized protein yrhA	Putative uncharacterized protein yrhA	YrhA protein	hypothetical protein	Uncharacterized protein YrhA	

ECOLI03313	Insertion element IS1 1/5/6 protein insB	Probable insertion element IS1 1/5/6 protein	identified by match to protein family HMM PF03400 InsB	insertion element IS1 1/5/6 protein InsB	Transposase	IS1 transposase InsAB'	Transposase IS1 orfB	
ECOLI03314	Uncharacterized protein yrhD	Putative uncharacterized protein yrhD	Putative uncharacterized protein yrhD	Putative uncharacterized protein	
ECOLI03315	Uncharacterized protein yrhB	Putative uncharacterized protein	Putative uncharacterized protein yrhB	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yrhB	Putative uncharacterized protein yrhB	Putative uncharacterized protein yrhB	Putative uncharacterized protein yrhB	Putative uncharacterized protein yrhB	Putative uncharacterized protein yrhB	YrhB protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI03316	Gamma-glutamyltranspeptidase	Gamma-glutamyltranspeptidase 2 [Source:GeneDB_Spombe;Acc:SPAC56E4.06c]	similar to sgd|S0004290 Saccharomyces cerevisiae YLR299w ECM38 gamma-glutamyltransferase, involved in glutathione synthesis, hypothetical start	Gamma-glutamyltranspeptidase	Gamma-glutamyltranspeptidase	Gamma-glutamyltranspeptidase	DEHA2D09130p;similar to uniprot|Q05902 Saccharomyces cerevisiae YLR299W ECM38 Gamma-glutamyltranspeptidase;	Gamma-glutamyltranspeptidase	Gamma-glutamyltranspeptidase	Capsule biosynthesis protein capD	Ggt protein	Gamma-glutamyltranspeptidase	Gamma-glutamyltranspeptidase	Gamma-glutamyltranspeptidase	Product confidence : putative Gene name confidence : putative putative gamma-glutamyltranspeptidase protein	Gamma-glutamyltranspeptidase	Gamma-glutamyltranspeptidase	gamma-glutamyltranspeptidase	Gamma-glutamyltranspeptidase	CDS_ID OB0203; gamma-glutamyltransferase family depolymerization of the capsular polymer	gamma-glutamyltranspeptidase	Gamma-glutamyltranspeptidase	Residues 10 to 589 of 589 are 99 pct identical to residues 1 to 580 of a 580 aa protein from Escherichia coli K12 ref: NP_417904.1 gamma-glutamyltranspeptidase	Similar to gamma-glutamyltranspeptidase	Probable gamma-glutamyltranspeptidase signal peptide protein	Gamma-glutamyltranspeptidase	similar to Gamma-glutamyltranspeptidase hypothetical protein	conserved gene gamma-glutamyltranspeptidase	Similar to gamma-glutamyltranspeptidase hypothetical protein	
ECOLI03318	Glycerophosphoryl diester phosphodiesterase	Putative glycerophosphoryl diester phosphodiesterase	hypothetical glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase family protein	Probable glcerophosphoryl diester phosphodiesterase	Lmo1292 protein	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase, glycerophosphodiester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase, putative	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase, putative	Glycerophosphoryl diester phosphodiesterase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase	Glycerophosphodiester phosphodiesterase, cytosolic	Glycerophosphoryl diester phosphodiesterase	Residues 1 to 247 of 247 are 98 pct identical to residues 1 to 247 of a 247 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289994.1 glycerophosphodiester phosphodiesterase, cytosolic	Glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase homolog	Probable glycerophosphoryl diester phosphodiesterase protein	conserved gene glycerophosphoryl diester esterase	Similar to glycerophosphodiester phosphodiesterase hypothetical protein	
ECOLI03317	Uncharacterized protein yhhA	Hypothetical protein yhhA	Putative uncharacterized protein yhhA	Residues 1 to 146 of 146 are 100 pct identical to residues 1 to 146 of a 146 aa protein from Escherichia coli K12 ref: NP_417905.1 orf, conserved hypothetical protein	putative outer membrane protein	similar to Salmonella typhi CT18 hypothetical protein hypothetical protein	Putative outer membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhhA	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yhhA	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative outer membrane protein	Putative uncharacterized protein	
ECOLI03319	sn-glycerol-3-phosphate import ATP-binding protein ugpC	375aa long hypothetical multiple sugar-binding transport ATP-binding protein	ABC transport system ATP-binding protein SP1P2A	Trehalose/maltose transport ATP-hydrolyzing protein	Glycerol-3-P ABC transporter ATP binding protein	sn-glycerol-3-phosphate import ATP-binding protein ugpC	sn-glycerol-3-phosphate import ATP-binding protein ugpC	SN-glycerol-3-phosphate transport ATP-binding protein ugpC	similar to GP:15160207, and SP:P10907; identified by sequence similarity; putative glycerol-3-phosphate ABC transporter, ATP-binding protein	sn-glycerol-3-phosphate import ATP-binding protein ugpC	sn-glycerol-3-phosphate import ATP-binding protein ugpC	sn-glycerol-3-phosphate import ATP-binding protein ugpC	Putative ABC transporter ATP-binding protein	sn-glycerol-3-phosphate import ATP-binding protein ugpC	sn-glycerol-3-phosphate import ATP-binding protein ugpC	sn-glycerol-3-phosphate import ATP-binding protein ugpC	ugpC, sn-Glycerol-3-phosphate transport ATP-binding protein	sn-glycerol-3-phosphate import ATP-binding protein ugpC	SCD8A.13c, msiK, ABC transporter ATP-binding protein, len: 378 aa; highly similar to TR:P96483 (EMBL:Y08921) Streptomyces reticuli gene encoding MsiK protein and ORF1, 377 aa; fasta scores: opt: 2268 z-score: 2471.1 E(): 0; 92.6% identity in 378 aa overlap and to SW:UGPC_ECOLI (EMBL:X13141) Escherichia coli sn-glycerol-3-phosphate transport ATP-binding protein UgpC, 365 aa; fasta scores: opt: 1031 z-score: 1127.4 E(): 0; 48.8% identity in 379 aa overlap also similar to TR:CAB46805 (EMBL:AL096811) Streptomyces coelicolor SCI30A.28c, 445 aa; fasta scores: opt: 866 z-score: 719.0 E(): 1.4e-34; 49.3% identity in 292 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature ABC transporter ATP-binding protein	sn-glycerol-3-phosphate import ATP-binding protein ugpC	Sugar ABC transporter, ATP-binding protein	sn-glycerol-3-phosphate import ATP-binding protein ugpC	glycerol transporter subunit A	sn-glycerol-3-phosphate import ATP-binding protein ugpC	sn-glycerol-3-phosphate import ATP-binding protein ugpC	SugC	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase ABC superfamily (atp_bind), sn-glycerol 3-phosphate transport protein	similar to Salmonella typhi CT18 sn-Glycerol-3-phosphate transport ATP-binding protein sn-Glycerol-3-phosphate transport ATP-binding protein	similar to BRA0658, glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC, glycerol-3-phosphate ABC transporter, ATP-binding protein	
ECOLI03320	sn-glycerol-3-phosphate transport system permease protein ugpE	sn-glycerol-3-phosphate transport system permease protein ugpE	Putative ABC transporter permease	SN-glycerol-3-phosphate transport system permease protein ugpE	similar to GP:15160208; identified by sequence similarity; putative glycerol-3-phosphate ABC transporter, permease protein	sn-glycerol-3-phosphate transport system permease protein	sn-glycerol-3-phosphate transport system permease protein	sn-glycerol-3-phosphate transport system permease protein ugpE	Product confidence : probable Gene name confidence : putative probable glycerol-3-phosphate ABC transporter permease protein	Glycerol-3-phosphate ABC transporter, permease protein	sn-glycerol-3-phosphate transport system permease protein	Glycerol-3-phosphate ABC transporter, permease protein	sn-glycerol-3-phosphate transport system permease protein ugpE	Sn-glycerol 3-phosphate transport system, integral membrane protein	Residues 1 to 281 of 281 are 100 pct identical to residues 1 to 281 of a 281 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289996.1 sn-glycerol 3-phosphate transport system, integral membrane protein	sn-glycerol-3-phosphate transport system permease protein ugpE	Probable sn-glycerol-3-phosphate transmembrane abc transporter protein	similar to glycerol-3-phosphate ABC transporter, permease component hypothetical protein	similar to glycerol-3-phosphate ABC transporter, permease component hypothetical protein	Probable ABC transporter family protein	sn-glycerol-3-phosphate ABC transporter	IPR000515: Binding-protein-dependent transport systems inner membrane component; IPR002091: Aromatic amino acid permease ABC superfamily (membrane),sn-glycerol 3-phosphate transport protein	similar to Salmonella typhi CT18 sn-Glycerol-3-phosphate transport system permease protein sn-Glycerol-3-phosphate transport system permease protein	similar to BRA0657, glycerol-3-phosphate ABC transporter, permease protein UgpE, glycerol-3-phosphate ABC transporter, permease protein	sn-glycerol-3-phosphate transport system permease protein ugpE	sn-glycerol-3-phosphate transport system permease protein ugpE	identified by match to protein family HMM PF00528 glycerol-3-phosphate ABC transporter, permease protein	Binding-protein-dependent transport systems inner membrane component	Binding-protein-dependent transport systems inner membrane component	
ECOLI03321	sn-glycerol-3-phosphate transport system permease protein ugpA	Putative ABC transporter permease	SN-glycerol-3-phosphate transport system permease protein ugpA	sn-glycerol-3-phosphate transport system permease protein ugpA	sn-glycerol-3-phosphate transport system permease protein ugpA	Residues 1 to 295 of 295 are 99 pct identical to residues 1 to 295 of a 295 aa protein from Escherichia coli K12 ref: NP_417909.1 sn-glycerol 3-phosphate transport system, integral membrane protein	sn-glycerol-3-phosphate transport system permease protein ugpA	Probable sn-glycerol-3-phosphate transmembrane abc transporter protein	identified by similarity to SP:P10905; match to protein family HMM PF00528 SN-glycerol-3-phosphate ABC transporter, permease protein	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), sn-glycerol 3-phosphate transport protein	similar to Salmonella typhi CT18 glycerol-3-phosphate transport system permease protein glycerol-3-phosphate transport system permease protein	sn-glycerol-3-phosphate transport system permease protein ugpA	sn-glycerol-3-phosphate transport system permease protein ugpA	Code: G; COG: COG1175 sn-glycerol 3-phosphate transport system integral membrane protein	sn-glycerol-3-phosphate ABC transporter,permease protein	ABC sugar transporter, inner membrane subunit	Code: G; COG: COG1175 sn-glycerol 3-phosphate transport system, integral membrane protein	Binding-protein-dependent transport systems inner membrane component	binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component: (1.8e-09) KEGG: sil:SPO0239 SN-glycerol-3-phosphate ABC transporter, permease protein, ev=1e-149, 88% identity	Binding-protein-dependent transport systems inner membrane component domain protein identified by match to protein family HMM PF00528	sn-glycerol-3-phosphate transport system permease protein ugpA	Sn-glycerol-3-phosphate transport system, permease protein	sn-glycerol-3-phosphate transport system permease protein ugpA	binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component KEGG: bur:Bcep18194_A3493 ABC sugar transporter, inner membrane subunit	glycerol-3-phosphate ABC transporter, permease protein	Sn-glycerol-3-phosphate transport system, permease protein	binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component KEGG: bcn:Bcen_2711 binding-protein-dependent transport systems inner membrane component	ABC sugar transporter, inner membrane subunit	glycerol-3-phosphate ABC transporter, permease protein identified by match to protein family HMM PF00528	
ECOLI03322	sn-glycerol-3-phosphate-binding periplasmic protein ugpB	Glycerol-3-phosphate-binding protein	Putative multiple sugar ABC transporter solute- binding protein	Sugar binding protein of ABC transporter system	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein	sn-glycerol-3-phosphate-binding periplasmic protein ugpB	sn-glycerol-3-phosphate-binding periplasmic protein ugpB	Putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein	Glycerol-3-phosphate-binding protein	Probable glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein	Putative ABC transporter extracellular solute- binding protein	Glycerol-3-phosphate-binding periplasmic protein	glycerol-3-phosphate-binding protein	Sugar ABC transporter, sugar-binding protein	identified by match to protein family HMM PF01547 glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative	similar to GP:15140275, and GP:43244; identified by sequence similarity; putative glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein	Glycerol-3-phosphate-binding periplasmic protein	Glycerol-3-phosphate-binding periplasmic protein	sn-glycerol-3-phosphate-binding periplasmic protein ugpB	Glycerol-3-phosphate ABC transporter substarate- binding protein	Product confidence : probable Gene name confidence : putative probable ABC transporter periplasmic glycerol-3-phosphate-binding protein precursor	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein	Glycerol-3-phosphate-binding periplasmic protein	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein	sn-glycerol-3-phosphate-binding periplasmic protein ugpB precursor	sn-glycerol-3-phosphate-binding periplasmic protein ugpB	Glycerol-3-phosphate ABC transporter	SCM11.07c, possible solute-binding protein, len: 430 aa; similar to TR:P73325 (EMBL:D90905) Synechocystis sp SrrA, 433 aa; fasta scores: opt: 611 z-score: 678.3 E(): 2.1e-30; 29.8% identity in 430 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1, Bacterial extracellular solute-binding protein and possible N-terminal region signal peptide sequence putative solute-binding protein	Glycerol-3-phosphate-binding periplasmic protein precursor ugpB	
ECOLI03323	High-affinity branched-chain amino acid transport ATP-binding protein livF	High-affinity branched-chain amino acid transport ATP-binding protein braG	High-affinity branched-chain amino acid transport ATP-binding protein livF	Probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein	High-affinity branched-chain amino acid transport ATP-binding protein	High-affinity branched-chain amino acid transport ATP-binding protein livF	branched-chain amino acid ABC transporter ATP-binding protein	High-affinity branched-chain amino acid transport, ATP-binding protein	High-affinity branched-chain amino acid transport, ATP-binding protein	High-affinity branched-chain amino acid transport ATP-binding protein	Branched chain amino acid ABC transporter ATP- binding protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN	High-affinity branched-chain amino acid transport, ATP-binding protein	ATP-binding component of leucine transport	High-affinity branched chain amino acid ABC transporter, ATP-binding protein	SC8A11.10, probable branched amino acid transport system ATP-binding protein, len: 237 aa; similar to SW:LIVF_ECOLI (EMBL:J05516) Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF, 237 aa; fasta scores: opt: 687 z-score: 739.1 E(): 0; 50.7% identity in 223 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature putative branched amino acid transport system ATP-binding protein	Residues 1 to 241 of 241 are 99 pct identical to residues 1 to 241 of a 241 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290000.1 ATP-binding component of leucine transport	High-affinity branched-chain amino acid transport, ATP-binding protein	High-affinity branched-chain amino acid transport ATP-binding protein LivF	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase ABC superfamily (atp_bind), branched-chain amino acid transporter, high-affinity	similar to Salmonella typhi CT18 high-affinity branched-chain amino acid transport ATP-binding protein high-affinity branched-chain amino acid transport ATP-binding protein	ABC type branched-chain aa transport, ATP-binding protein	Branched-chain amino acid ABC transporter, ATP- binding protein	High-affinity branched-chain amino acid transport ATP-binding protein livF	identified by match to protein family HMM PF00005 high-affinity amino acid ABC transporter, ATP-binding protein	identified by match to protein family HMM PF00005 branched-chain amino acid ABC transporter, ATP-binding protein	ABC transporter related	ABC transporter	Code: E; COG: COG0410 ATP-binding component of leucine transport	
ECOLI03324	High-affinity branched-chain amino acid transport ATP-binding protein livG	High-affinity branched-chain amino acid transport ATP-binding protein livG	High-affinity branched-chain amino acid transport ATP-binding protein livG	Branched-chain amino acid ABC transporter, ATP- binding protein	High-affinity branched chain amino acid ABC transporter, ATP-binding protein	High-affinity branched-chain amino acid transport, ATP-binding protein	High-affinity branched-chain amino acid transport, ATP-binding protein	High-affinity branched-chain amino acid transport ATP-binding protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN	High-affinity branched-chain amino acid ABC transporter, ATP-binding protein	High-affinity branched-chain amino acid transport, ATP-binding protein	branched-chain amino acid ABC transporter (ATP-binding protein)	Putative branched chain amino acid ABC transporter, ATP-binding protein	High-affinity branched-chain amino acid transport ATP-binding protein livG	ATP-binding component of ABC transporter (high-affinity branched-chain amino acid transport)	High-affinity branched-chain amino acid ABC transporter, ATP-binding protein	Residues 1 to 255 of 255 are 100 pct identical to residues 1 to 255 of a 255 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290001.1 ATP-binding component of high-affinity branched-chain amino acid transport system	High-affinity branched-chain amino acid transport, ATP-binding protein	High-affinity branched-chain amino acid transport ATP-binding protein LivG	Amino acid ABC transporter	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase ABC superfamily (atp_bind), branched-chain amino acid transporter, high-affinity	similar to Salmonella typhi CT18 high-affinity branched-chain amino acid transport ATP-binding protein high-affinity branched-chain amino acid transport ATP-binding protein	High-affinity branched-chain amino acid transport, ATP-binding protein	ABC type branched-chain aa transport, ATP-binding protein	Putative ABC transporter ATP-binding protein - branched chain amino acid transport	Branched-chain amino acid ABC transporter, ATP- binding protein	High-affinity branched-chain amino acid transport ATP-binding protein livG	identified by match to protein family HMM PF00005 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein	identified by match to protein family HMM PF00005 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein	
ECOLI03325	High-affinity branched-chain amino acid transport system permease protein livM	Branched-chain amino acid ABC transporter, permease protein	High-affinity branched-chain amino acid transport system permease protein braE	ABC transporter, membrane spanning protein	High-affinity branched-chain amino acid transport system permease protein	High-affinity branched-chain amino acid transport system permease protein	High-affinity branched-chain amino acid transport system permease protein livM	similar to GP:15075507; identified by sequence similarity; putative branched-chain amino acid ABC transporter, permease protein	High-affinity branched-chain amino acid ABC transporter, permease protein	High-affinity branched-chain amino acid transport system, permease protein	High-affinity branched-chain amino acid transport system, permease protein	High-affinity branched-chain amino acid transport system permease protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT PERMEASE ABC TRANSPORTER PROTEIN	High-affinity branched-chain amino acid ABC transporter, permease protein	High-affinity branched-chain amino acid transport system, permease protein	HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT SYSTEM PERMEASE PROTEIN LIVM	High-affinity branched-chain amino acid transport	High-affinity branched-chain amino acid ABC transporter, permease protein	Putative permease of ABC transporter	Branched-chain amino acid ABC transporter permease protein	Residues 1 to 425 of 425 are 99 pct identical to residues 1 to 425 of a 425 aa protein from Escherichia coli K12 ref: NP_417913.1 high-affinity branched-chain amino acid transport	High-affinity branched-chain amino acid transport system, permease protein	High-affinity branched-chain amino acid transport system permease protein LivM	identified by similarity to SP:P22729; match to protein family HMM PF02653 branched-chain amino acid ABC transporter, permease protein	Amino acid ABC transporter	IPR001851: Bacterial inner-membrane translocator ABC superfamily (membrane), branched-chain amino acid transporter, high-affinity	similar to Salmonella typhi CT18 high-affinity branched-chain amino acid transport system permease protein high-affinity branched-chain amino acid transport system permease protein	similar to BR1790, branched-chain amino acid ABC transporter, permease protein branched-chain amino acid ABC transporter, permease protein	ABC type branched-chain aa transport system, permease	
ECOLI03326	High-affinity branched-chain amino acid transport system permease protein livH	Branched-chain amino acid ABC transporter, permease protein	Permease of ABC transporter for branched-chain amino acids	High-affinity branched-chain amino acid transport system permease protein braD	Branched-chain amino acid transport system permease protein livH	ABC transporter, membrane spanning protein	High-affinity branched-chain amino acid transport system permease protein livH	High-affinity branched-chain amino acid transport system permease protein	High-affinity branched-chain amino acid transport system permease protein livH	similar to GP:15075508; identified by sequence similarity; putative branched-chain amino acid ABC transporter, permease protein	High-affinity branched-chain amino acid ABC transporter, permease protein	High-affinity branched-chain amino acid transport system, permease protein	High-affinity branched-chain amino acid transport system, permease protein	High-affinity branched-chain amino acid transport system permease protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT PERMEASE ABC TRANSPORTER PROTEIN	High-affinity branched-chain amino acid ABC transporter, permease protein	High-affinity branched-chain amino acid transport system, permease protein	branched-chain amino acid transport protein	Putative branched-chain amino acid transporter permease protein	HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT SYSTEM PERMEASE PROTEIN LIVH	High-affinity branched-chain amino acid transport system permease protein livH	High-affinity branched-chain amino acid ABC transporter, permease protein	Branched-chain amino acid ABC transporter permease protein	Residues 1 to 308 of 308 are 99 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290003.1 high-affinity branched-chain amino acid transport system; membrane component	High-affinity branched-chain amino acid transport system, permease protein	High-affinity branched-chain amino acid transport system permease protein LivH	Branched-chain amino acid ABC transporter, permease protein	Amino acid ABC transporter	Branched-chain amino acid ABC transporter, permease protein	
ECOLI03327	Leucine-specific-binding protein	Leucine-specific-binding protein	Leucine-specific binding protein	High-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein	Leucine-specific binding protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE LEU/ILE/VAL-BINDING PROTEIN	High-affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein	Putative transporter	Leu/Ile/Val-binding protein homolog 3 precursor	High-affinity leucine-specific transport system; periplasmic binding protein	Branched-chain amino acid ABC transporter substrate-binding protein	Residues 19 to 387 of 387 are 99 pct identical to residues 1 to 369 of a 369 aa protein from Escherichia coli K12 ref: NP_417915.1 high-affinity leucine-specific transport system; periplasmic binding protein	similar to Salmonella typhi CT18 leucine-specific binding protein leucine-specific binding protein	Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein	Leucine-specific-binding protein	identified by match to protein family HMM PF01094 high-affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein	Extracellular ligand-binding receptor	Code: E; COG: COG0683 high-affinity leucine-specific transport system; periplasmic binding protein	Code: E; COG: COG0683 high-affinity leucine-specific transport system periplasmic binding protein	leu/ile/val-binding protein Also similar to BAV1895 (59.299 38d).	Extracellular ligand-binding receptor	Code: E; COG: COG0683 high-affinity leucine-specific transport system; periplasmic binding protein	putative solute-binding component of ABC transporter similarity:fasta; with=UniProt:Q8UD51_AGRT5 (EMBL:AE008143); Agrobacterium tumefaciens (strain C58/ATCC 33970).; braC; ABC transporter, substrate binding protein (AGR_C_4134p).; length=368; id 78.804; 368 aa overlap; query 1-367; subject 1-368	amino acid ABC transporter, substrate-binding protein similar to braC (Atu2276) [Agrobacterium tumefaciens str. C58] and LivJ (SMc00078) [Sinorhizobiummeliloti] Similar to swissprot:Q8UD51 Putative location:bacterial periplasmic space Psort-Score: 0.9359; go_component: periplasmic space (sensu Gram-negative Bacteria) [goid 0030288]; go_function: amino acid-polyamine transporter activity [goid 0005279]; go_process: amino acid transport [goid 0006865]	Leucine-specific binding protein	Leucine-specific binding protein	high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein	Leu/Ile/Val-binding protein identified by match to protein family HMM PF01094	Branched-chain amino acid-binding protein precursor	
ECOLI03328	Uncharacterized protein yhhK	Hypothetical protein yhhK	Putative acetyltransferase	Putative uncharacterized protein yhhK	Residues 1 to 127 of 127 are 99 pct identical to residues 1 to 127 of a 127 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290005.1 orf, conserved hypothetical protein	Putative acetyltransferase	Similar to unknown protein YhhK of Escherichia coli	IPR000182: GCN5-related N-acetyltransferase putative acetyltransferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative acetyltransferase	Putative acetyltransferase	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative acetyltransferase	Putative acyltransferase	Acetyltransferase	Putative acetyltransferase	conserved hypothetical protein	Acetyltransferase	conserved hypothetical protein	GCN5-related N-acetyltransferase	Putative acyltransferase	Putative uncharacterized protein	Acetyltransferase, GNAT family	GCN5-related N-acetyltransferase precursor	Conserved protein	
ECOLI03329	Leu/Ile/Val-binding protein	pseudo	Leu/Ile/Val-binding protein precursor	Leu/Ile/Val-binding protein	Residues 1 to 386 of 386 are 99 pct identical to residues 1 to 386 of a 386 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290008.1 high-affinity amino acid transport system; periplasmic binding protein	IPR000709: Leu/Ile/Val-binding protein family; IPR001828: Extracellular ligand-binding receptor Leu/Ile/Val/Thr-binding protein precursor	similar to Salmonella typhimurium ABC superfamily (bind_prot), branched-chain amino acid transporter, high-affinity ABC superfamily (bind_prot), branched-chain amino acid transporter, high-affinity	Leu/Ile/Val/Thr-binding protein	Extracellular ligand-binding receptor	ABC-type transport system periplasmic substrate-binding protein (probable substrates branched-chain/neutral amino acids amide) 2	Code: E; COG: COG0683 high-affinity amino acid transport system; periplasmic binding protein	Code: E; COG: COG0683 high-affinity amino acid transport system periplasmic binding protein	Code: E; COG: COG0683 high-affinity amino acid transport system periplasmic binding protein	Leu/Ile/Val-binding protein	Leu/Ile/Val-binding protein	Extracellular ligand-binding receptor	leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor identified by match to protein family HMM PF01094	Leu/Ile/Val-binding protein precursor Code: E; COG: COG0683	Leu/Ile/Val-binding protein precursor	Extracellular ligand-binding receptor precursor	High-affinity branched-chain amino acid transport protein	Putative uncharacterized protein	High-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein LivJ	Leu/ile/val-binding protein	Putative extracellular ligand-binding protein precursor	Extracellular ligand-binding receptor precursor	Leucine/isoleucine/valine transporter subunit; periplasmic-binding component of ABC superfamily	High-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein LivJ	Extracellular ligand-binding receptor precursor	
ECOLI03330	RNA polymerase sigma-32 factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma-32 factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma-32 factor	RNA polymerase sigma-32 factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	Heat shock sigma factor RpoH	putative RNA polymerase sigma-32 factor	RNA polymerase sigma-32 factor	identified by match to TIGR protein family HMM TIGR01637 RNA polymerase sigma-70 factor family protein	RNA polymerase sigma-32 factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma-32 factor	RNA polymerase sigma factor	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE RNA POLYMERASE SIGMA-32 FACTOR HEAT SHOCK REGULATORY PROTEIN	RNA polymerase sigma factor	RNA polymerase sigma factor	RNA polymerase sigma-32 factor	RNA POLYMERASE SIGMA-32 FACTOR	RNA polymerase sigma factor	
ECOLI03331	Cell division protein ftsX	Cell division protein	Cell division protein	Cell division protein ftsX homolog	Cell division protein FtsX	Cell division protein, putative	Putative cell division protein	Cell-division protein	Cell division ABC transporter, permease protein FtsX, putative	Putative cell division protein FtsX	FtsX	Cell division protein FtsX	Cell division protein	Cell division protein ftsX	Cell division protein	Cell-division protein	Cell division ABC transporter, permease protein FtsX	Related to cell division protein	FtsX protein	Cell division protein ftsX	Cell division ABC transporter, permease	hypothetical cell division protein FtsX	Cell division protein ftsX	Cell division ABC transporter, permease protein FtsX	identified by match to protein family HMM PF02687 cell division ABC transporter, permease protein FtsX	Permease, putative	Cell division protein FtsX	Putative permease protein	Putative permease protein	
ECOLI03332	Cell division ATP-binding protein ftsE	Putative cell division ATP-binding protein	Cell-division ATP-binding protein	FtsE	Cell division ATP-binding protein FtsE	Cell division ATP-binding protein FtsE	Cell division ATP-binding protein ftsE	Cell division ATP-binding protein ftsE	identified by match to protein family HMM PF00005 cell division ABC transporter, ATP-binding protein FtsE	Cell division ABC transporter, ATP-binding protein FtsE	Cell division ATP-binding protein	Cell division ATP-binding protein FtsE	Cell division ATP-binding protein FtsE	Cell division ATP-binding protein ftsE	cell division ATP-binding protein FtsE	Cell division ATP-binding protein	Cell division ATP-binding protein	ABC transporter, ATP-binding protein	Predicted ATPase involved in cell division	Residues 1 to 193 of 193 are 100 pct identical to residues 30 to 222 of a 222 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290011.1 ATP-binding component of a membrane-associated complex involved in cell division	Cell division ATP-binding protein	Cell division ATP-binding protein	cell-division ATP-binding protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase putative ATPase involved in cell division	similar to Salmonella typhi CT18 cell division ATP-binding protein FtsE cell division ATP-binding protein FtsE	Cell division ATP-binding protein	cell division ATP-binding protein FtsE	Similar to: HI0769, FTSE_HAEIN cell division ATP-binding protein FtsE	Predicted ATPase involved in cell division FtsE protein	
ECOLI03333	Cell division protein ftsY	Cell division protein FtsY	Signal recognition particle receptor	Signal recognition particle receptor	Cell division protein ftsY homolog	Signal recognition particle GTPase	Putative signal recognition particle receptor	FtsY signal recognition particle	Signal recognition particle receptor	Signal recognition particle-docking protein FtsY	Signal recognition particle-docking protein FtsY	Cell division protein ftsY homolog	FtsY	Signal recognition particle receptor FtsY	Signal recognition particle GTPase	Cell division particle	Cell division protein	Probable cell division protein FtsY	Signal recognition particle GTPase	Putative cell division protein	putative cell division protein FtsY	Cell division protein ftsY	Signal recognition particle-docking protein FtsY	similar to GP:15076263, GB:M95585, GB:X68985, PID:184224, and PID:402776; identified by sequence similarity; putative signal recognition particle-docking protein FtsY	Cell division protein FtsY	Cell division protein	Cell division protein	Cell division protein FtsY	Cell division protein	
ECOLI03334	Ribosomal RNA small subunit methyltransferase D	Methyltransferase	Methyltransferase, putative	Putative uncharacterized protein	Putative uncharacterized protein	Ribosomal RNA small subunit methyltransferase D	identified by match to PFAM protein family HMM PF03602 hypothetical protein	Putative methyltransferase	Methylase, putative	Putative RNA methylase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE1730	Methylase, putative	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	N6-adenine-specific methylase	Methyltransferase	Putative uncharacterized protein	Putative uncharacterized protein STY4239	All1367 protein	Putative methyltransferase	Putative uncharacterized protein	Lmo2053 protein	N6-adenine-specific methylase	Putative uncharacterized protein ML1664	
ECOLI03335	Uncharacterized protein yhhL	Hypothetical protein yhhL	Putative membrane protein	Putative uncharacterized protein VP2958	Putative uncharacterized protein yhhL	Residues 2 to 90 of 90 are 100 pct identical to residues 1 to 89 of a 89 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290014.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to unknown protein YhhL of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative inner membrane protein	Code: S; COG: COG3776 conserved hypothetical protein	Code: S; COG: COG3776 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3776; orf conserved hypothetical protein	Putative membrane protein	Hypothetical protein	Putative membrane protein	Putative uncharacterized protein yhhL	Membrane protein	Putative membrane protein	protein of unknown function DUF1145 PFAM: protein of unknown function DUF1145 KEGG: son:SO4588 hypothetical protein	conserved hypothetical protein Code: S; COG: COG3776	protein of unknown function DUF1145 PFAM: protein of unknown function DUF1145 KEGG: son:SO4588 hypothetical protein	Membrane protein	hypothetical protein DUF1145 PFAM: protein of unknown function DUF1145 KEGG: ppr:PBPRA0151 hypothetical protein	Hypothetical protein	Putative uncharacterized protein	
ECOLI03336	Uncharacterized protein yhhM	Hypothetical protein yhhM	Putative exported protein	Putative receptor	Residues 1 to 119 of 119 are 98 pct identical to residues 1 to 119 of a 119 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290015.1 putative receptor	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative inner membrane protein	putative receptor	putative receptor	putative receptor	Putative membrane protein	Putative membrane protein precursor	Putative uncharacterized protein yhhM	Membrane protein precursor	Putative membrane protein precursor	putative receptor	Membrane protein precursor	conserved hypothetical protein	Putative receptor precursor	Putative receptor	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative receptor precursor	
ECOLI03337	Uncharacterized membrane protein yhhN	Putative membrane protein	conserved hypothetical protein	Hypothetical protein yhhN	Putative uncharacterized protein	Putative membrane protein	Uncharacterized membrane protein yhhN	Predicted membrane protein	Residues 1 to 208 of 208 are 100 pct identical to residues 1 to 208 of a 208 aa protein from Escherichia coli O157:H7 ref: NP_312344.1 putative enzyme	Putative membrane protein	Similar to unknown protein YhhN of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative inner membrane protein	Code: S; COG: COG3714 putative enzyme	Code: S; COG: COG3714 putative enzyme	conserved hypothetical protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein yhhN	Membrane protein	membrane protein, putative identified by match to protein family HMM PF07947	Putative membrane protein	Hypothetical protein	putative enzyme Code: S; COG: COG3714	Membrane protein	conserved hypothetical protein putative inner membrane protein	YhhN family protein	
ECOLI03338	Lead, cadmium, zinc and mercury-transporting ATPase	Cation-transporting P-type ATPase	Zinc-transporting ATPase	Cadmium efflux ATPase	similar to GB:J04456, GB:M57678, GB:D28452, GB:X15256, GB:X14829, GB:S44881, SP:P05163, SP:P09382, PID:184228, PID:23239, PID:307122,  and PID:34343; identified by sequence similarity; putative cation-transporting ATPase, E1-E2 family	P type cation (Metal) transporter, ATPase component	Heavy metal-transporting ATPase	Cation-transporting ATPase	Copper-transporting ATPase	Cation-transporting ATPase	similar to GP:15073052; identified by sequence similarity; putative cadmium-translocating P-type ATPase	Cation transport ATPase, E1-E2 family	Putative membrane transport ATPase	Putative membrane transport ATPase	Lead, cadmium, zinc and mercury transporting ATPase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE HEAVY METAL TRANSPORTING ATPASE PROTEIN	Putative membrane transport ATPase	CATION-TRANSPORTING ATPASE PACS	Cation transport ATPase, E1-E2 family	Zinc-transporting ATPase	probable metal-transporting P-type ATPase	Putative cation-transporting P-type ATPase	Residues 1 to 732 of 732 are 99 pct identical to residues 1 to 732 of a 732 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290017.1 zinc-transporting ATPase	Putative P-type cation-translocating membrane ATPase	Lead, cadmium, zinc and mercury transporting ATPase	conserved gene cadmium efflux ATPase	Cadmium resistance protein B	Heavy metal-transporting ATPase protein	Cation-transporting ATPase	
ECOLI03339	Sulfurtransferase tusA	Sulfurtransferase tusA homolog	Sulfurtransferase tusA homolog	Sulfurtransferase tusA homolog	Sulfurtransferase tusA	Conserved hypothetical protein	Sulfurtransferase tusA	similar to GP:15075708, and GP:15075708; identified by sequence similarity; putative conserved hypothetical protein	Sulfurtransferase tusA homolog	Sulfurtransferase tusA homolog	Sulfurtransferase tusA	Sulfurtransferase tusA	Sulfurtransferase tusA homolog	Hypothetical Transcriptional Regulatory Protein	Sulfurtransferase tusA homolog	Sulfurtransferase tusA	hypothetical protein	Sulfurtransferase tusA	Sulfurtransferase tusA homolog	Residues 1 to 81 of 81 are 100 pct identical to residues 1 to 81 of a 81 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290018.1 orf, conserved hypothetical protein	Sulfurtransferase tusA	Sulfurtransferase tusA	identified by similarity to SP:P37618; match to protein family HMM PF01206 SirA family protein	IPR001455: Protein of unknown function UPF0033 small ubiquitous protein required for normal growth	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	similar to BR2034, conserved hypothetical protein conserved hypothetical protein	Sulfurtransferase tusA	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type f : factor small ubiquitous protein required for normal growth	hypothetical transcriptional regulatory protein	
ECOLI03340	Inner membrane protein yhhQ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV3185	Transporter	Putative uncharacterized protein	Putative membrane protein	conserved hypothetical protein	Hypothetical protein yhhQ	similar to GP:15159702, and GP:15075693; identified by sequence similarity; putative membrane protein, putative	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Putative membrane protein	Putative uncharacterized protein	Hypothetical Membrane Spanning Protein	Putative uncharacterized protein VP3004	Putative uncharacterized protein yhhQ	hypothetical protein	Membrane protein, putative	Putative uncharacterized protein	Transmembrane protein	Residues 1 to 221 of 221 are 100 pct identical to residues 1 to 221 of a 221 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290019.1 orf, conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein	
ECOLI03341	Protein dcrB	DcrB protein	Putative lipoprotein	Putative uncharacterized protein	Residues 1 to 203 of 203 are 99 pct identical to residues 1 to 203 of a 203 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290020.1 orf, conserved hypothetical protein	Putative lipoprotein	putative inner membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	Putative inner membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	DcrB protein	Putative lipoprotein precursor	Putative uncharacterized protein	Lipoprotein precursor	Putative lipoprotein	conserved hypothetical protein	Lipoprotein precursor	conserved hypothetical protein	Putative uncharacterized protein	Periplasmic protein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein precursor	Periplasmic protein	Putative lipoprotein	
ECOLI03342	UPF0226 protein yhhS	Hypothetical protein	UPF0226 protein PA1993	UPF0226 protein yhhS	UPF0226 protein BPSL2729	UPF0226 protein yhhS	multidrug resistance protein-like	Putative membrane protein	Transporter, putative	Transporter, putative	UPF0226 protein yhhS	CDS_ID OB3076; antibiotic efflux protein antibiotic resistance protein	BH2079 protein	Residues 1 to 419 of 419 are 99 pct identical to residues 1 to 419 of a 419 aa protein from Escherichia coli K12 ref: NP_417930.1 putative transport	predicted permease, major facilitator superfamily	Similarities with transporter protein	transporter, putative	Antibiotic resistance protein	Efflux transporter protein	IPR007114: Major facilitator superfamily putative MFS family transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Membrane protein, putative	UPF0226 protein yhhS	conserved hypothetical protein,predicted sugar transporter superfamily	Probable MFS family transport protein	identified by match to protein family HMM PF07690 transporter, putative	Major facilitator superfamily	Code: GEPR; COG: COG0477 putative transport	Code: GEPR; COG: COG0477 putative transport	
ECOLI03343	UPF0118 inner membrane protein yhhT	Putative membrane protein	Hypothetical protein yhhT	UPF0118 inner membrane protein yhhT	Membrane protein	Residues 1 to 349 of 349 are 99 pct identical to residues 16 to 364 of a 364 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290022.1 orf, conserved hypothetical protein	IPR002549: Protein of unknown function UPF0118 putative PerM family permease	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative PerM family permease	Code: R; COG: COG0628 conserved hypothetical protein	conserved hypothetical protein	Code: R; COG: COG0628 conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein yhhT	conserved hypothetical protein Code: R; COG: COG0628	conserved hypothetical protein	Putative membrane protein; predicted permease	Putative uncharacterized protein	Putative permease	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	
ECOLI03344	4'-phosphopantetheinyl transferase acpT	4'-phosphopantetheinyl transferase acpT	4'-phosphopantetheinyl transferase acpT	Residues 1 to 195 of 195 are 98 pct identical to residues 1 to 195 of a 195 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290041.1 orf, conserved hypothetical protein	IPR008278: 4'-phosphopantetheinyl transferase putative Phosphopantetheinyl transferase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	4'-phosphopantetheinyl transferase acpT	Code: H; COG: COG2091 conserved hypothetical protein	Code: H; COG: COG2091 conserved hypothetical protein	Code: H; COG: COG2091; orf conserved hypothetical protein	4'-phosphopantetheinyl transferase AcpT	4'-phosphopantetheinyl transferase AcpT	conserved hypothetical protein Code: H; COG: COG2091	holo-(acyl carrier protein) synthase 2	4'-phosphopantetheinyl transferase	Putative uncharacterized protein	4'-phosphopantetheinyl transferase acpT	Holo-(Acyl carrier protein) synthase 2	4'-phosphopantetheinyl transferase acpT	4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase acpT	Putative uncharacterized protein	Putative uncharacterized protein	4'-phosphopantetheinyl transferase, HetI	4'-phosphopantetheinyl transferase acpT	Putative uncharacterized protein	4'-phosphopantetheinyl transferase AcpT	4'-phosphopantetheinyl transferase AcpT	4'-phosphopantetheinyl transferase AcpT	
ECOLI03345	Nickel-binding periplasmic protein	Nickel-binding periplasmic protein	similar to GP:12331180, and GP:12331180; identified by sequence similarity; putative nickel ABC transporter, nickel-binding protein, putative	NICKEL-BINDING PERIPLASMIC PROTEIN	Periplasmic binding protein for nickel	Nickel transport system	Residues 1 to 524 of 524 are 99 pct identical to residues 1 to 524 of a 524 aa protein from Escherichia coli K12 ref: NP_417933.1 periplasmic binding protein for nickel	Oligopeptide transporter putative substrate binding domain	oligopeptide transporter putative substrate binding domain	ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components OppA protein	Nickel ABC transporter, periplasmic nickel- binding protein	Code: E; COG: COG0747 periplasmic binding protein for nickel	Code: E; COG: COG0747 periplasmic binding protein for nickel	extracellular solute-binding protein, family 5	Code: E; COG: COG0747 periplasmic binding protein for nickel	Nickel-binding periplasmic protein	Nickel-binding periplasmic protein	periplasmic binding protein for nickel Code: E; COG: COG0747	nickel-binding periplasmic protein precursor NikA	Nickel ABC transporter, periplasmic nickel- binding protein	Nickel ABC transporter, periplasmic nickel- binding protein precursor	Nickel ABC transporter, periplasmic nickel- binding protein precursor	Oligopeptide transporter putative substrate binding domain	Nickel transport protein	Nickel ABC transporter, periplasmic nickel- binding protein NikA	nickel ABC transporter, periplasmic nickel-binding protein GO_component: outer membrane-bounded periplasmic space [GO ID 0030288]; GO_function: nickel-transporting ATPase activity [GO ID 0015413]; GO_process: nickel ion transport [GO ID 0015675]	nickel ABC transporter, periplasmic nickel-binding protein TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein PFAM: extracellular solute-binding protein family 5 KEGG: sav:SAV2467 oligopeptide transporter putative substrate binding domain	nickel ABC transporter, periplasmic nickel-binding protein TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein PFAM: extracellular solute-binding protein, family 5	Nickel ABC transporter, periplasmic nickel- binding protein	
ECOLI03346	Nickel transport system permease protein nikB	similar to GP:12331181, and SP:P33591; identified by sequence similarity; putative nickel ABC transporter, permease protein	NICKEL TRANSPORT SYSTEM PERMEASE PROTEIN NIKB	Transport of nickel, membrane protein	Residues 1 to 314 of 314 are 99 pct identical to residues 1 to 314 of a 314 aa protein from Escherichia coli K12 ref: NP_417934.1 transport of nickel, membrane protein	similar to BRA0803, nickel ABC transporter, permease protein NikB, nickel ABC transporter, permease protein	Nickel ABC transporter, permease protein	Code: EP; COG: COG0601 transport of nickel, membrane protein	Binding-protein-dependent transport systems inner membrane component:Delayed-early response protein/equilibrative nucleoside ...	transport of nickel, membrane protein; Code: EP; COG: COG0601 NikB	Code: EP; COG: COG0601 transport of nickel membrane protein	Binding-protein-dependent transport systems inner membrane component	Nickel transport system permease protein NikB	Nickel transport system permease protein NikB	transport of nickel, membrane protein Code: EP; COG: COG0601	nickel transport system permease protein NikB	Nickel ABC transporter, permease subunit NikB	ABC transporter permease protein	Binding-protein-dependent transport systems inner membrane component precursor	Nickel transport protein	Nickel ABC transporter, permease protein NikB	nickel ABC transporter, permease subunit NikB GO_component: integral to plasma membrane [GO ID 0005887]; GO_function: permease activity [GO ID 0015646]; GO_process: nickel ion transport [GO ID 0015675]	Nickel transport system permease protein NikB	Nickel ABC transporter, permease subunit NikB precursor	Nickel transporter subunit; membrane component of ABC superfamily	Nickel ABC transporter, permease protein NikB	Nickel ABC transporter, permease subunit NikB precursor	Nickel ABC transporter, permease protein NikB	Nickel ABC transporter, permease subunit NikB	
ECOLI03347	Nickel transport system permease protein nikC	similar to GP:12331182, and SP:P33592; identified by sequence similarity; putative nickel ABC transporter, permease protein	NICKEL TRANSPORT SYSTEM PERMEASE PROTEIN NIKC	Nickel transport system permease protein nikC	Residues 1 to 277 of 277 are 98 pct identical to residues 1 to 277 of a 277 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290044.1 transport of nickel, membrane protein	similar to BRA0802, nickel ABC transporter, permease protein NikC, nickel ABC transporter, permease protein	Nickel ABC transporter, permease protein	Code: EP; COG: COG1173 transport of nickel, membrane protein	Binding-protein-dependent transport systems inner membrane component	transport of nickel, membrane protein; Code: EP; COG: COG1173 NikC	Code: EP; COG: COG1173 transport of nickel membrane protein	Binding-protein-dependent transport systems inner membrane component	Nickel transport system permease protein NikC	Nickel transport system permease protein NikC	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, putative	transport of nickel, membrane protein Code: EP; COG: COG1173	nickel transport system permease protein NikC	Nickel ABC transporter, permease subunit NikC	Binding-protein-dependent transport systems inner membrane component precursor	Nickel transport proein	Nickel ABC transporter, permease protein NikC	nickel ABC transporter, permease subunit NikC GO_component: integral to plasma membrane [GO ID 0005887]; GO_function: permease activity [GO ID 0015646]; GO_process: nickel ion transport [GO ID 0015675]	dTDP-glucose 4,6-dehydratase	Nickel ABC transporter, permease subunit NikC precursor	Nickel transporter subunit; membrane component of ABC superfamily	Nickel ABC transporter, permease protein NikC	Nickel ABC transporter, permease subunit NikC precursor	Nickel ABC transporter, permease protein NikC	Nickel ABC transporter, permease subunit NikC	
ECOLI03348	Nickel import ATP-binding protein nikD	Nickel import ATP-binding protein nikD	Residues 1 to 254 of 254 are 98 pct identical to residues 1 to 254 of a 254 aa protein from Escherichia coli K12 ref: NP_417936.1 ATP-binding protein of nickel transport system	Code: EP; COG: COG0444 ATP-binding protein of nickel transport system	Code: EP; COG: COG0444 ATP-binding protein of nickel transport system	Code: EP; COG: COG0444 ATP-binding protein of nickel transport system	ABC transporter component	Nickel import ATP-binding protein nikD	Nickel import ATP-binding protein nikD	ATP-binding protein of nickel transport system Code: EP; COG: COG0444	nickel transport ATP-binding protein NikD	ABC transporter related	ATP-binding protein of nickel transport system	Nickel ABC transporter, ATP-binding protein NikD	Nickel transporter subunit; ATP-binding component of ABC superfamily	Nickel ABC transporter, ATP-binding protein NikD	Nickel import ATP-binding protein NikD	Nickel ABC transporter, ATP-binding protein NikD	Putative uncharacterized protein	ABC transporter related	ABC transporter related	Nickel ABC transporter, ATP-binding protein NikD	Nickel ABC transporter, ATP-binding protein NikD	Nickel ABC transporter, ATP-binding protein NikD	Nickel ABC transporter ATP-binding component	Nickel transporter subunit ; ATP-binding component of ABC superfamily	Nickel transporter subunit ; ATP-binding component of ABC superfamily	Nickel transporter subunit ; ATP-binding component of ABC superfamily	Nickel transporter subunit ; ATP-binding component of ABC superfamily	
ECOLI03349	Nickel import ATP-binding protein nikE	Nickel import ATP-binding protein nikE	Nickel import ATP-binding protein nikE	Residues 1 to 268 of 268 are 95 pct identical to residues 1 to 268 of a 268 aa protein from Escherichia coli K12 ref: NP_417937.1 ATP-binding protein of nickel transport system	similar to BRA0800, nickel ABC transporter, ATP-binding protein NikE, nickel ABC transporter, ATP-binding protein	Putative uncharacterized protein gbs1573	hypothetical protein, similar to nickel transport ATP-binding protein nikE	Code: EP; COG: COG1124 ATP-binding protein of nickel transport system	ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:GTP1/OBG	Code: EP; COG: COG1124 ATP-binding protein of nickel transport system	Code: EP; COG: COG1124 ATP-binding protein of nickel transport system	Nickel import ATP-binding protein nikE	Nickel import ATP-binding protein nikE	ATP-binding protein of nickel transport system Code: EP; COG: COG1124	nickel transport ATP-binding protein NikE	ABC transporter related	ATP-binding protein of nickel transport system	Nickel ABC transporter, ATP-binding protein NikE	Nickel import ATP-binding protein NikE	Nickel transporter subunit; ATP-binding component of ABC superfamily	Nickel ABC transporter, ATP-binding protein NikE	Nickel import ATP-binding protein NikE	Nickel ABC transporter, ATP-binding protein NikE	Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein	Putative uncharacterized protein	Nickel ABC transporter, ATP-binding protein NikE	ATP/GTP-binding site motif A	ABC transporter, ATP-binding protein	Nickel ABC transporter, ATP-binding protein NikE	
ECOLI03350	Nickel-responsive regulator	Putative nickel-responsive regulator	Putative nickel-responsive regulator	Putative nickel-responsive regulator	Putative nickel responsive regulator	Putative nickel-responsive regulator	Putative nickel-responsive regulator	Putative nickel-responsive regulator	Putative nickel-responsive regulator	Putative nickel-responsive regulator	Putative nickel-responsive regulator	Nickel-responsive regulator	Putative nickel-responsive regulator	Nickel-responsive regulator	similar to GP:12331179, and GP:12331179; identified by sequence similarity; putative nikR protein, putative	Putative nickel-responsive regulator	Putative nickel-responsive regulator	Nickel-responsive regulator	Nickel-responsive regulator	Putative nickel-responsive regulator	Putative nickel-responsive regulator	Residues 1 to 133 of 133 are 100 pct identical to residues 1 to 133 of a 133 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290047.1 orf, conserved hypothetical protein	probable nickel responsive regulator	Nickel-responsive transcriptional regulator NikR	IPR002145: Helix-turn-helix protein, CopG family nickel-responsive transcriptional regulator	similar to Salmonella typhi CT18 nickel responsive regulator nickel responsive regulator	Putative nickel-responsive regulator	similar to BRA0805, nikR protein, hypothetical hypothetical NikR	Putative nickel responsive regulator	
ECOLI03351	Protein rhsB	RhsD protein	Protein rhsB	RhsB element core protein RshB	RhsB protein	YD repeat protein	pseudo	Rhs core protein	RhsB protein	RhsB element core protein RshB	RhsB element core protein RshB	
ECOLI03352	Uncharacterized protein yhhH	Putative uncharacterized protein	Putative uncharacterized protein yhhH	YhhH protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI03353	pseudo	pseudo	
ECOLI03354	H repeat-associated protein yhhI	Predicted transposase	Predicted transposase	Predicted transposase	
ECOLI03355	Inner membrane transport permease yhhJ	Membrane protein, putative	NatB-like ABC-type transport protein, Na+ efflux pump membrane component	Probable permease of ABC transporter	Putative bacteriocin ABC transporter, permease protein	Export ABC transporter permease protein	Multidrug ABC transporter, permease	Putative ABC transport system, membrane protein	Hypothetical protein yhhJ	similar to GP:15158527; identified by sequence similarity; putative ABC transporter, permease protein, putative	ABC transporter (ATP-binding protein)	ABC transporter, permease	DAUNORUBICIN RESISTANCE TRANSMEMBRANE PROTEIN	Putative transporter	Probable permease of ABC transporter	Residues 28 to 402 of 402 are 100 pct identical to residues 1 to 375 of a 375 aa protein from Escherichia coli K12 ref: NP_417942.1 putative transporter	Putative ABC-2 type transport system permease protein	ABC transporter permease protein	IPR000412: ABC transporter, family 2 putative ABC superfamily (atp_bind/membrane) transport protein	similar to Salmonella typhimurium putative ABC superfamily (atp_bind/membrane) transport protein putative ABC superfamily (atp_bind/membrane) transport protein	similar to BR1349, ABC transporter, permease protein, hypothetical hypothetical ABC transporter, permease protein	ABC transporter, permease protein	ABC transporter, permease protein	ABC-type multidrug transport system, permease component	Putative ABC superfamily transport protein	ABC transporter	multidrug ABC transporter, permease	identified by match to protein family HMM PF01061 ABC transporter, permease protein	ABC-2	
ECOLI03356	Uncharacterized ABC transporter ATP-binding protein yhiH	ABC transporter, ATP-binding protein	Putative uncharacterized protein	Probable ATP-binding/permease fusion ABC transporter	ABC transporter, nucleotide binding/ATPase protein	Hypothetical ABC transporter ATP-binding protein	Putative ABC transport system, ATP-binding protein	Hypothetical ABC transporter ATP-binding protein yhiH	similar to GP:15158528; identified by sequence similarity; putative ABC transporter, ATP binding/permease protein	ABC transporter, ATP-binding protein	RND efflux system, cytoplasmic membrane extrusion protein	Putative ATP-binding component of a transport system, 1	ABC-2 type transport system permease and double ATP-binding protein fusion	Residues 18 to 911 of 911 are 99 pct identical to residues 1 to 894 of a 894 aa protein from Escherichia coli K12 ref: NP_417943.1 putative ATP-binding component of a transport system, fragment 1	ATPase component ABC-type multidrug transport system	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase putative ABC-type multidrug transport system, ATPase component; Permease component of an ABC-transporter	similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein hypothetical ABC transporter ATP-binding protein	ABC transporter, ATP-binding/permease protein	ABC-type multidrug transport system, ATPase component CcmA protein	ABC-type multidrug transport system, ATPase (two domains) and permease components	Putative ABC-type multidrug transport system	putative ABC transporter ATP-binding protein yhiH	identified by match to protein family HMM PF00005; match to protein family HMM PF01061 ABC transporter, ATP binding/permease protein	ABC-2:ABC transporter related	Code: V; COG: COG1131 putative ATP-binding component of a transport system, fragment 1	pseudo ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase	ABC transporter, 2 fused ATPase and 1 inner membrane subunits	Code: V; COG: COG1131 putative ATP-binding component of a transport system, fragment 1	ABC transporter ATP-binding protein	
ECOLI03357	Uncharacterized protein yhiI	HlyD family secretion protein	Putative uncharacterized protein	Putative uncharacterized protein	HlyD family secretion protein	Putative HlyD family secretion protein	Alr1501 protein	Putative ABC transport system, exported protein	Hypothetical protein yhiI	similar to GP:15158529; identified by sequence similarity; putative HlyD family secretion protein	Periplasmic component of efflux system	Putative membrane protein	Probable membrane fusion protein (HlyD family of secretion proteins) linked to ABC efflux pumps	Residues 1 to 355 of 355 are 99 pct identical to residues 1 to 355 of a 355 aa protein from Escherichia coli K12 ref: NP_417944.1 putative membrane protein	Type I antifreeze protein:HlyD family secretion protein	identified by similarity to PIR:H82993 conserved hypothetical protein	IPR003997: Gram-negative bacterial RTX secretion protein D; IPR006143: Secretion protein HlyD paral putative membrane protein	similar to Salmonella typhi Ty2 putative HlyD-family secretion protein putative HlyD-family secretion protein	similar to BR1351, HlyD family secretion protein HlyD family secretion protein	HlyD family secretion protein	Membrane-fusion protein AcrA protein	Membrane fusion protein	HlyD family secretion protein	Putative membrane protein	conserved hypothetical protein,predicted secretion protein HlyD family	identified by match to protein family HMM PF00529 membrane fusion protein	Secretion protein HlyD	Code: M; COG: COG0845 putative membrane protein	Gram-negative bacterial RTX secretion protein D:Secretion protein HlyD	
ECOLI03358	Uncharacterized protein yhiJ	Residues 1 to 540 of 540 are 97 pct identical to residues 1 to 540 of a 540 aa protein from Escherichia coli K12 ref: NP_417945.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhiJ	Putative uncharacterized protein yhiJ	pseudo	Putative uncharacterized protein yhiJ	YhiJ protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	


ECOLI03360	Inner membrane protein yhiM	Putative uncharacterized protein CPE2059	Putative uncharacterized protein	Hypothetical protein yhiM	Putative uncharacterized protein yhiM	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1789905 (384 aa). BLAST with identity of 96% in 375 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Similar to Bacteroides thetaiotaomicron conserved hypothetical protein BT0805 SWALL:AAO75912 (EMBL:AE016929) (349 aa) fasta scores: E(): 1.7e-108, 77.65% id in 349 aa, and to Escherichia coli hypothetical protein YhiM or B3491 SWALL:YHIM_ECOLI (SWALL:P37630) (364 aa) fasta scores: E(): 4.6e-56, 45.89% id in 353 aa conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	putative membrane protein	Putative uncharacterized protein	membrane protein, putative	putative membrane protein	Putative uncharacterized protein yhiM	conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Conserved inner membrane protein	Putative uncharacterized protein precursor	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein yhiM	Putative uncharacterized protein yhiM	Putative uncharacterized protein yhiM	Putative uncharacterized protein yhiM	Putative uncharacterized protein yhiM	Putative uncharacterized protein	Conserved inner membrane protein	
ECOLI03361	Uncharacterized protein yhiN	Sll0586 protein	Putative uncharacterized protein	Uncharacterized protein HI0933	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE0953	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted flavoprotein	Putative uncharacterized protein	Putative exported protein	Putative exported protein	conserved hypothetical protein	Hypothetical protein yhiN	identified by match to PFAM protein family HMM PF03486 conserved hypothetical protein TIGR00275	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03362	Low-affinity inorganic phosphate transporter 1	Putative uncharacterized protein	Probable phosphate transporter	Putative low-affinity inorganic phosphate transporter	Low-affinity inorganic phosphate transporter 1	Probable phosphate transporter	Probable phosphate transporter	Low-affinity inorganic phosphate transporter	Phosphate transporter family protein	Probable phosphate transporter	Low-affinity inorganic phosphate transporter 1	similar to AL132644-30|CAB59461.1| percent identity: 56 in 384 aa putative phosphate transport protein PitA	Low-affinity inorganic phosphate transporter	Residues 1 to 499 of 499 are 99 pct identical to residues 1 to 499 of a 499 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290064.1 low-affinity phosphate transport	Phosphate transport protein	PitA protein	PitA	Low-affinity inorganic phosphate transporter	IPR001092: Basic helix-loop-helix dimerization domain bHLH; IPR001204: Phosphate transporter PiT family, low-affinity phosphate transporter	similar to Salmonella typhi CT18 putative low-affinity inorganic phosphate transporter putative low-affinity inorganic phosphate transporter	Low affinity phosphate transporter, PiT family	, predicted protein, len = 494 aa, probably phosphate-repressible phosphate permease, possible; predicted pI = 7.8430; good similarity to several including Q9N931, phosphate-repressible phosphate permease in Trypanosoma brucei; contains a Phosphate transporter family domain (pfam:PF01384;2e-125;codon 25-480); has 9 probable transmembrane helices (aa 7-26, 87-109, 116-138, 158-180, 193-210, 225-247, 373-395, 432-454 and 466-488) phosphate-repressible phosphate permease-like protein	Low-affinity phosphate transporter	go_component: plasma membrane [goid 0005886]; go_function: sodium:inorganic phosphate symporter activity [goid 0015319]; go_process: phosphate transport [goid 0006817] phosphate-repressible phosphate permease	ortholog to Escherichia coli bnum: b3493; MultiFun: Cell structure 6.1; Metabolism 1.8.1; Transport 4.2.A.20, 4.S.155 low-affinity phosphate transport protein (PiT family)	identified by match to protein family HMM PF01384 phosphate transporter family protein	Code: P; COG: COG0306 low-affinity phosphate transport	Code: P; COG: COG0306 low affinity phosphate transport	low-affinity inorganic phosphate transport protein	
ECOLI03363	Universal stress protein B	Universal stress protein B	conserved hypothetical protein	Universal stress protein B	Universal stress protein B homolog	Universal stress protein B	Universal stress protein B homolog	Universal stress protein B	Universal stress protein B homolog	Residues 1 to 111 of 111 are 100 pct identical to residues 1 to 111 of a 111 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290065.1 orf, conserved hypothetical protein	Universal stress protein B	Universal stress protein B	universal stress protein B, involved in stationary-phase resistance to ethanol	similar to Salmonella typhi CT18 universal stress protein B universal stress protein B	Universal stress protein B	universal stress protein B	Universal stress protein B	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Universal stress protein B	Universal stress protein B	Universal stress protein B	Universal stress protein B	Universal stress protein B	conserved hypothetical protein	Universal stress protein B	universal stress protein UspB	Universal stress protein B	
ECOLI03364	Universal stress protein A	Universal stress protein A homolog	Universal stress protein UspA	Universal stress protein A	putative universal stress protein A	Universal stress protein A	Universal stress protein A	Universal stress protein A	Universal stress protein A	Universal stress protein A	Universal stress protein A homolog 1	Universal stress protein UspA	Residues 1 to 144 of 144 are 100 pct identical to residues 1 to 144 of a 144 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290066.1 universal stress protein; broad regulatory function?	Universal stress protein A	Universal stress protein A	IPR006016: Usp domain universal stress protein A	similar to Salmonella typhi CT18 universal stress protein A universal stress protein A	Universal stress protein A	universal stress protein A	Similar to: HI0815, USPA_HAEIN universal stress protein A	Universal stress protein UspA and related nucleotide-binding proteins UspA protein	Universal stress protein A	Universal stress protein A	universal stress protein A	possible broad regulatory function; Code: T; COG: COG0589 universal stress protein	possible broad regulatory function; Code: T; COG: COG0589 universal stress protein	universal stress protein A	Code: T; COG: COG0589 universal stress protein; broad regulatory function?	Universal stress protein	
ECOLI03365	Inner membrane transporter yhiP	Putative PTR2 family transport protein	putative PTR2 family transport protein	Hypothetical transporter yhiP	go_component: plasma membrane [goid 0005886]; go_function: peptide transporter activity [goid 0015197]; go_process: peptide transport [goid 0015833] peptide transporter, putative	Proton-dependent oligopeptide transporter (POT) family protein	Putative transport protein	similar to Escherichia coli K12 putative transport protein gi: 1789911 (490 aa). BLAST with identity of 98% in 489 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	IPR000109: TGF-beta receptor, type I/II extracellular region; IPR001092: Basic helix-loop-helix dimerization domain bHLH; IPR005279: Amino acid/peptide transporter putative POT family, peptide transport protein	similar to Salmonella typhi CT18 putative PTR2 family transport protein putative PTR2 family transport protein	di-/tripeptide transporter	Similar to Q9KTB5 Proton/peptide symporter family protein from Vibrio cholerae (514 aa). FASTA: opt: 1234 Z-score: 1376.6 E(): 8.7e-69 Smith-Waterman score: 1245; 42.050identity in 478 aa overlap. ORF ftt1253 Proton-dependent oligopeptide transport (POT) family protein	Putative POT family peptide transport protein	Code: E; COG: COG3104 putative transport protein	Code: E; COG: COG3104 putative transport protein	Code: E; COG: COG3104 putative transport protein	Hypothetical transporter YhiP	Amino acid/peptide transporter	proton/peptide symporter family protein	Proton-dependent oligopeptide transport (POT) family protein Similar to Q9KTB5 Proton/peptide symporter family protein from Vibrio cholerae (514 aa). FASTA: opt: 1234 Z-score: 1376.6 E(): 8.7e-69 Smith-Waterman score: 1245; 42.050identity in 478 aa overlap. ORF ftt1253	Hypothetical transporter YhiP	inner membrane transporter YhiP identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924	Putative peptide transporter	proton-dependent oligopeptide transporter (POT) family protein, di-or tripeptide:H+ symporter	Amino acid/peptide transporter	putative transporter	Putative peptide transport protein	Putative uncharacterized protein	Amino acid/peptide transporter	
ECOLI03366	UPF0341 protein yhiQ	UPF0341 protein NMB1608	UPF0341 protein PM1804	UPF0341 protein PA3680	UPF0341 protein VV0071	UPF0341 protein Atu4040	UPF0341 protein yhiQ	UPF0341 protein DP2215	conserved hypothetical protein	UPF0341 protein Bd0559	UPF0341 protein yhiQ	UPF0341 protein VC_0073	UPF0341 protein SO_4658	UPF0341 protein ECA0054	UPF0341 protein BUsg_565	UPF0341 protein PSPTO_1515	UPF0341 protein VP0073	UPF0341 protein yhiQ	UPF0341 protein CBU_1876	UPF0341 protein RPA3487	UPF0341 protein BU586	UPF0341 protein VV1_1112	Residues 1 to 271 of 271 are 99 pct identical to residues 15 to 285 of a 285 aa protein from Escherichia coli pir: S47717 orf, conserved hypothetical protein	UPF0341 protein YPO3974/y3856/YP_3336	UPF0341 protein plu0123	Similar to conserved hypothetical protein hypothetical protein	conserved gene SAM-dependent methyltransferase	Similar to conserved hypothetical protein hypothetical protein	UPF0341 protein CV_0463	
ECOLI03367	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Putative oligopeptidase A	Peptidase family M3	Oligopeptidase A	PrlC	Oligopeptidase A	Zn-dependent oligopeptidase	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	putative oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	Oligopeptidase A	
ECOLI03368	Uncharacterized protein yhiR	Transformation competence-related protein	Putative uncharacterized protein	Uncharacterized protein HI0441	Putative uncharacterized protein	Putative uncharacterized protein	OrfJ	Putative uncharacterized protein	Putative uncharacterized protein VV0066	Putative uncharacterized protein	Putative uncharacterized protein STY4206	Putative uncharacterized protein	Hypothetical protein yhiR	identified by Glimmer2; putative conserved hypothetical protein	Putative uncharacterized protein VC0187	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Florfenicol resistance protein	Putative uncharacterized protein VP0069	Putative uncharacterized protein yhiR	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03369	Glutathione reductase	glutathione reductase;	Cytosolic and mitochondrial glutathione oxidoreductase, converts oxidized glutathione to reduced glutathione. [Source:SGD;Acc:S000006012]	similar to sp|P41921 Saccharomyces cerevisiae YPL091w GLR1 glutathione reductase (NADPH), hypothetical start	Glutathione reductase [Source:GeneDB_Spombe;Acc:SPBC17A3.07]	highly similar to sp|P41921 Saccharomyces cerevisiae YPL091w GLR1 glutathione reductase (NADPH), start by similarity	glutathione reductase	Reductase	Glutathione reductase	highly similar to uniprot|P41921 Saccharomyces cerevisiae YPL091w GLR1;	DEHA2E13442p;similar to uniprot|P41921 Saccharomyces cerevisiae YPL091w GLR1 glutathione reductase (NADPH) and highly similar to ca|CA3086|CaGLR1 Candida albicans CaGLR1 glutathione reductase;	Probable glutathione reductase	Glutathione reductase	Gor	Glutathione reductase	Glutathione reductase	putative glutathione reductase	Glutathione reductase	Glutathione reductase	Glutathione reductase	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_component: mitochondrion [goid 0005739]; go_function: glutathione-disulfide reductase activity [goid 0004362]; go_process: response to oxidative stress [goid 0006979] glutathione-disulfide reductase, putative	Glutathione reductase	Putative glutathione reductase	Putative glutathione reductase	Glutathione reductase	Glutathione reductase	Glutathione oxidoreductase	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component	Lin0906 protein	

ECOLI03371	Arsenical resistance operon repressor	ArsR protein	Transcriptional regulator, ArsR family	Transcriptional regulator, ArsR family	Arsenical resistence operon repressor	Arsenical resistance operon repressor	Transcriptional regulator, ArsR family	Transcriptional repressor of chromosomal ars operon	Transcriptional regulator, ArsR family, ArsR3	Pli0034 protein	Arsenical resistance operon repressor	Arsenical resistance operon repressor	transcriptional regulator, ArsR family	identified by similarity to GB:AAC69642.1; match to protein family HMM PF01022 arsenic resistance transcriptional regulator	Code: K; COG: COG0640 transcriptional repressor of chromosomal ars operon	similar to gi|16119216|ref|NP_395552.1| [Staphylococcus aureus subsp. aureus N315], percent identity 82 in 104 aa, BLASTP E(): 3e-45 putative arsenical resistance operon repressor	identified by match to protein family HMM PF01022 transcriptional regulator, ArsR family	Predicted metal-regulated homodimeric transcriptional regulator	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 12829264, 12949088; Product type r : regulator putative arsenic resistance operon regulator	Code: K; COG: COG0640 transcriptional repressor of chromosomal ars operon	putative transcriptional regulator, ArsR family	transcriptional regulator, ArsR family	transcriptional regulator, ArsR family	transcriptional regulator, ArsR family	Transcriptional regulator, ArsR family	Transcriptional Regulator, ArsR family	Code: K; COG: COG0640 transcriptional repressor of chromosomal ars operon	transcriptional regulator, ArsR family	Transcriptional regulator, ArsR family	
ECOLI03372	Arsenical pump membrane protein	Arsenical pump membrane protein	ArsB protein	Arsenical pump membrane protein	Arsenical pump membrane protein	Residues 1 to 394 of 394 are 100 pct identical to residues 36 to 429 of a 429 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290073.1 arsenical pump membrane protein	Arsenical pump membrane protein	Arsenical pump membrane protein	Molecular Function: arsenite transporter activity (GO:0015105), Cellular Component: integral to membrane (GO:0016021) Arsenical pump membrane protein	Arsenical efflux pump/H+ antiporter, arsB	identified by similarity to SP:P37310; match to protein family HMM PF02040; match to protein family HMM TIGR00935 arsenical pump membrane protein	Code: P; COG: COG1055 arsenical pump membrane protein	Code: P; COG: COG1055 arsenical pump membrane protein	Arsenical pump membrane protein	Arsenical pump membrane protein	Code: P; COG: COG1055 arsenical pump membrane protein	Arsenical pump membrane protein	Arsenical pump membrane protein	Arsenical pump membrane protein	Arsenical pump membrane protein	Arsenical pump membrane protein PFAM: Arsenical pump membrane protein; Citrate transporter KEGG: lxx:Lxx13260 arsenical pump membrane protein	arsenical pump membrane protein TIGRFAM: arsenical pump membrane protein PFAM: Arsenical pump membrane protein; Citrate transporter KEGG: sbo:SBO_3500 arsenical pump membrane protein	arsenical pump membrane protein	arsenical pump membrane protein Code: P; COG: COG1055	arsenical pump membrane protein TIGRFAM: arsenical pump membrane protein PFAM: Arsenical pump membrane protein; Citrate transporter KEGG: sbo:SBO_3500 arsenical pump membrane protein	Arsenical pump membrane protein	Arsenic efflux pump protein	Arsenical pump membrane protein	ArsB	
ECOLI03373	Arsenate reductase	Arsenate reductase	Arsenate reductase	Arsenate reductase	Putative uncharacterized protein	Arsenate reductase	Putative arsenate reductase	Arsenate reductase	similar to SP:P23621; identified by sequence similarity; putative arsenate reductase ArsC, putative	pseudo	Arsenate reductase	Arsenate reductase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL ARSENATE REDUCTASE PROTEIN	Arsenate reductase	arsenate reductase	Putative arsenate reductase	ARSENATE REDUCTASE	Arsenate reductase	arsenate reductase	Arsenate reductase pump modifier	Arsenate reductase	Residues 1 to 141 of 141 are 100 pct identical to residues 1 to 141 of a 141 aa protein from Escherichia coli K12 ref: NP_417960.1 arsenate reductase	Arsenate reductase family protein	Arsenate reductase	similar to BR0989, arsenate reductase ArsC, hypothetical arsenate reductase ArsC, hypothetical	Putative uncharacterized protein gbs1254	arsenate reductase	Arsenate reductase family protein	best blastp match gb|AAK33811.1| (AE006538) putative arsenate reductase [Streptococcus pyogenes M1 GAS] putative arsenate reductase	
ECOLI03374	Putative uncharacterized protein yhiS	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	YhiS protein	Predicted protein	pseudo conserved predicted protein, N-terminal fragment	
ECOLI03375	Transposase insH for insertion sequence element IS5	Transposase family protein	conserved hypothetical protein	IS5 family transposase	Transposase IS4 family protein	IS5 transposase and trans-activator; CP4-44 prophage	IS5 transposase and trans-activator; CP4-44 prophage	

ECOLI03376	Outer membrane protein slp	Uncharacterized protein HI0389	Outer membrane protein slp	Outer membrane protein induced after carbon starvation	Residues 45 to 243 of 243 are 100 pct identical to residues 1 to 199 of a 199 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290077.1 outer membrane protein induced after carbon starvation	Code: M; COG: COG3065 outer membrane protein induced after carbon starvation	outer membrane protein induced after carbon starvation; Code: M; COG: COG3065 Slp	Code: M; COG: COG3065 outer membrane protein induced after carbon starvation	Outer membrane protein Slp	Starvation induced outer membrane protein	outer membrane lipoprotein Slp PFAM: outer membrane lipoprotein Slp KEGG: gme:Gmet_1429 outer membrane lipoprotein Slp	outer membrane protein induced after carbon starvation Code: M; COG: COG3065	outer membrane protein induced after carbon starvation	Putative uncharacterized protein	Outer membrane protein	Outer membrane lipoprotein, Slp family	Outer membrane lipoprotein	Outer membrane lipoprotein, Slp family	Outer membrane lipoprotein, Slp family precursor	Outer membrane lipoprotein, Slp family	Outer membrane lipoprotein, Slp family	Outer membrane lipoprotein, Slp family	Putative uncharacterized protein	Outer membrane lipoprotein	Outer membrane lipoprotein	Outer membrane lipoprotein	Outer membrane lipoprotein	Outer membrane lipoprotein	Outer membrane lipoprotein	
ECOLI03377	HTH-type transcriptional regulator dctR	HTH-type transcriptional regulator dctR	Residues 1 to 167 of 167 are 99 pct identical to residues 10 to 176 of a 176 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290078.1 orf, conserved hypothetical protein	Code: K; COG: COG2771 conserved hypothetical protein	Code: K; COG: COG2771 conserved hypothetical protein	Code: K; COG: COG2771; orf conserved hypothetical protein	Hypothetical transcriptional regulator YhiF	Hypothetical transcriptional regulator YhiF	conserved hypothetical protein Code: K; COG: COG2771	predicted DNA-binding ranscriptional regulator	Transcriptional regulator DctR	Predicted DNA-binding ranscriptional regulator	Transcriptional regulator DctR	Transcriptional regulator, LuxR family	Transcriptional regulator DctR	Transcriptional regulator DctR	Transcriptional regulator DctR	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	YhiF protein	Predicted DNA-binding transcriptional regulator	Predicted DNA-binding ranscriptional regulator	predicted DNA-binding transcriptional regulator	
ECOLI03378	Uncharacterized protein yhiD	Mg(2+) transport ATPase-related protein	Hypothetical protein yhiD	MgtC/SapB family protein	Putative Mg(2+) transporter	Putative Mg(2+) transporter	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Putative Mg2+ transport protein	Putative Mg(2+) transporter	probable transport ATPase	hypothetical conserved protein	Uncharacterized protein yhiD	Probable mgtC protein	Putative membrane protein	InterProMatches:IPR003416; Cellular Component: membrane (GO:0016020) SapB	Putative Mg++ transporter, mgtC famliy	Putative Mg(2+) transport ATPase/permease	identified by match to protein family HMM PF02308 transporter, MgtC family	MgtC/SapB transporter	Code: S; COG: COG1285 putative transport ATPase	MgtC/SapB transporter	MgtC/SapB transporter	uncharacterized membrane protein COG1285	putative transmembrane cation transporter protein similarity:fasta; with=UniProt:SRPB_SYNP7 (EMBL:SS20224); Synechococcus sp. (strain PCC 7942) (Anacystis nidulans R2).; srpB; SrpB protein.; length=182; id 35.461; 141 aa overlap; query 22-153; subject 17-153 similarity:fasta; with=UniProt:Q92RU7_RHIME (EMBL:SME591784); Rhizobium meliloti (Sinorhizobium meliloti).; HYPOTHETICAL TRANSMEMBRANE PROTEIN.; length=190; id 63.158; 152 aa overlap; query 1-152; subject 1-152	Putative uncharacterized protein	Putative membrane protein	MgtC family protein identified by match to protein family HMM PF02308	Putative uncharacterized protein yhiD	MgtC/SapB family transporter	
ECOLI03379	Protein hdeB	Protein hdeB precursor	Putative uncharacterized protein hdeB	Residues 1 to 112 of 112 are 100 pct identical to residues 1 to 112 of a 112 aa protein from Escherichia coli K12 ref: NP_417966.1 orf, conserved hypothetical protein	putative periplasmic transport protein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative periplasmic transport protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein hdeB	conserved hypothetical protein	putative acid resistance protein HdeB	Putative uncharacterized protein hdeB	Putative uncharacterized protein	HdeB protein	Acid-resistance protein	HdeB protein	Putative uncharacterized protein precursor	HdeB protein	Putative uncharacterized protein	HdeB protein	Putative secreted protein	Protein HdeB	Protein HdeB	Protein HdeB	Putative secreted protein	Putative uncharacterized protein	
ECOLI03380	Chaperone-like protein hdeA	similar to GB:D14970, GB:L22498, GB:L22499, GB:D31771, SP:P35548, PID:1321638, PID:1722694, PID:1758335, PID:285931, GB:D14970, GB:L22498, GB:L22499, GB:D31771, SP:P35548, PID:1321638, PID:1722694, PID:1758335, and PID:285931; identified by sequence similarity; putative hdeA protein	PROTEIN HDEA	Chaperone-like protein hdeA	Residues 1 to 110 of 110 are 100 pct identical to residues 1 to 110 of a 110 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290090.1 orf, conserved hypothetical protein	similar to BRA0341, hdeA protein HdeA	conserved hypothetical protein	hdeA protein	conserved hypothetical protein	acid-resistance protein, (putative chaperone) Also similar to BAV2796 (59.1 38d)	orf conserved hypothetical protein	Hns-dependent expression protein HdeA	Protein HdeA	conserved hypothetical protein	stress response protein; acid-resistance protein	HdeA protein	Protein HdeA	Hypothetical protein, conserved	Stress response protein acid-resistance protein	Hns-dependent expression protein A	HNS-dependent expression A precursor	Hns-dependent expression protein A	HNS-dependent expression A	HNS-dependent expression A precursor	HNS-dependent expression A precursor	Hns-dependent expression protein A	HdeA protein	Hns-dependent expression protein A	Putative uncharacterized protein	
ECOLI03381	Protein hdeD	hypothetical protein	HdeD protein	Protein hdeD	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein	Residues 1 to 175 of 175 are 100 pct identical to residues 16 to 190 of a 190 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290091.1 orf, conserved hypothetical protein	Putative membrane protein	Putative membrane protein hypothetical protein	conserved gene hypothetical protein	Putative membrane protein hypothetical protein	Putative HdeD-like membrane protein. 	hypothetical protein	Code: S; COG: COG3247 conserved hypothetical protein	conserved hypothetical protein	hypothetical protein	Code: S; COG: COG3247 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3247; orf conserved hypothetical protein	conserved hypothetical protein	HdeD protein	conserved hypothetical protein	Putative membrane protein precursor	HdeD protein	conserved hypothetical protein	HdeD protein	conserved hypothetical protein KEGG: aba:Acid345_0606 hypothetical protein	
ECOLI03382	Transcriptional regulator gadE	Transcriptional regulator gadE	Residues 27 to 201 of 201 are 100 pct identical to residues 1 to 175 of a 175 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290092.1 orf, conserved hypothetical protein	Code: K; COG: COG2771 conserved hypothetical protein	Code: K; COG: COG2771 conserved hypothetical protein	Code: K; COG: COG2771; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhiE	conserved hypothetical protein Code: K; COG: COG2771	putative DNA-binding transcriptional activator	Transcriptional regulator GadE	Acid-induced positive regulator of glutamate- dependent acid resistance	Transcriptional regulator GadE	Transcriptional regulator, LuxR family	Transcriptional regulator GadE	Transcriptional regulator GadE	Transcriptional regulator GadE	Putative uncharacterized protein	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	GadE protein	Acid-induced positive regulator of glutamate- dependent acid resistance	DNA-binding transcriptional activator	DNA-binding transcriptional activator GadE	

ECOLI03383	Multidrug resistance protein mdtE	Multidrug resistance protein mdtE precursor	Multidrug resistance protein mdtE	similar to Escherichia coli K12 putative membrane protein gi: 1789929 (386 aa). BLAST with identity of 99% in 302 aa. This CDS has been truncated. The sequence has been checked and is believed to be correct. pseudo	Code: M; COG: COG0845 putative membrane protein	Code: M; COG: COG0845 putative membrane protein	Code: M; COG: COG0845 putative membrane protein	Putative uncharacterized protein	Secretion protein HlyD	Hypothetical lipoprotein YhiU	acriflavine resistance protein E	multidrug resistance efflux transporter	Component of acridine efflux pump	RND efflux system, membrane fusion protein CmeA	Multidrug resistance protein MdtE	Multidrug resistance efflux transporter	Multidrug resistance protein MdtE	Efflux transporter, RND family, MFP subunit precursor	Multidrug resistance protein MdtE	Efflux transporter, RND family, MFP subunit	Efflux transporter, RND family, MFP subunit precursor	Efflux transporter, RND family, MFP subunit precursor	Multidrug resistance protein MdtE	Multidrug resistance protein MdtE	Putative lipoprotein	Efflux transporter, RND family, MFP subunit	Multidrug resistance efflux transporter	Multidrug resistance efflux transporter	Multidrug resistance efflux transporter	
ECOLI03384	Multidrug resistance protein mdtF	Putative RND family multidrug-efflux transporter	Multidrug resistance protein mdtF	Multidrug resistance protein mdtF	no database matches orf, hypothetical protein	Multidrug-efflux transporter	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark multidrug efflux transporter	putative RND family multidrug efflux transporter	Code: V; COG: COG0841 putative transport system permease protein	Code: V; COG: COG0841 putative transport system permease protein	Code: V; COG: COG0841 putative transport system permease protein	Hypothetical integral membrane protein YhiV	multidrug efflux transporter identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Putative uncharacterized protein yhiV	Putative RND family multidrug efflux transporter	putative transport system permease protein Code: V; COG: COG0841	acriflavin resistance protein PFAM: acriflavin resistance protein KEGG: sat:SYN_02074 acriflavin resistance plasma membrane protein	putative multidrug transporter MdtF, RpoS-dependent	Multidrug resistance protein MdtF	Multidrug transporter, RpoS-dependent	Multidrug resistance protein MdtF	Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family	Multidrug resistance protein MdtF	Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family	Multidrug-efflux transporter	Multidrug resistance protein MdtF	AcrB protein	Multidrug resistance protein MdtF	Multidrug transport protein	
ECOLI03385	HTH-type transcriptional regulator gadW	TCP pilus virulence regulatory protein	HTH-type transcriptional regulator gadW	Residues 1 to 242 of 242 are 100 pct identical to residues 1 to 242 of a 242 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290095.1 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Hypothetical transcriptional regulator YhiW	Hypothetical transcriptional regulator YhiW	putative ARAC-type regulatory protein Code: K; COG: COG2207	DNA-binding transcriptional activator YhiW	Transcriptional regulator GadW	DNA-binding transcriptional activator	Transcriptional regulator GadW	Transcriptional regulator, AraC family	Transcriptional regulator GadW	TCP pilus virulence regulatory protein	Transcriptional regulator GadW	Transcriptional regulator GadW	Putative transcriptional regulator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	DNA-binding transcriptional activator	pseudo	DNA-binding transcriptional activator	
ECOLI03386	HTH-type transcriptional regulator gadX	Putative CFA/I fimbrial subunit D	HTH-type transcriptional regulator gadX	Residues 1 to 274 of 274 are 98 pct identical to residues 1 to 274 of a 274 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290096.1 putative ARAC-type regulatory protein	SdiA-regulated gene;putative bacterial regulatory helix-turn-helix proteins, araC family	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Transcriptional regulator GadX	Transcriptional regulator GadX	putative ARAC-type regulatory protein Code: K; COG: COG2207	DNA-binding transcriptional dual regulator GadX	Transcriptional regulator, AraC family	Transcriptional regulator GadX	DNA-binding transcriptional dual regulator	Transcriptional regulator GadX	Transcriptional regulator, AraC family	Transcriptional regulator GadX	Transcriptional regulator GadX	Transcriptional regulator GadX	HTH-type transcriptional regulator, AraC family	Putative transcriptional regulator	DNA-binding transcriptional dual regulator	DNA-binding transcriptional dual regulator	DNA-binding transcriptional dual regulator	DNA-binding transcriptional dual regulator	DNA-binding transcriptional dual regulator	HTH-type transcriptional regulator gadX	DNA-binding transcriptional dual regulator	
ECOLI03387	Glutamate decarboxylase alpha	Glutamate decarboxylase alpha	Glutamate decarboxylase alpha	Code: E; COG: COG0076 glutamate decarboxylase isozyme	Code: E; COG: COG0076 glutamate decarboxylase isozyme	Glutamate decarboxylase alpha	Glutamate decarboxylase	Glutamate decarboxylase A, PLP-dependent	Glutamate decarboxylase GadA	Glutamate decarboxylase	Glutamate decarboxylase GadB	Glutamate decarboxylase	Glutamate decarboxylase A, PLP-dependent	Glutamate decarboxylase A, PLP-dependent	Glutamate decarboxylase A, PLP-dependent	GadA protein	Glutamate decarboxylase A, PLP-dependent	Glutamate decarboxylase A, PLP-dependent	glutamate decarboxylase A, PLP-dependent	Glutamate decarboxylase	
ECOLI03388	Probable cytochrome c peroxidase	Putative uncharacterized protein	Probable cytochrome c peroxidase	Cytochrome c peroxidase	Probable cytochrome C peroxidase	cytochrome c551 peroxidase	Cytochrome c551 peroxidase	Putative cytochrome C peroxidase	Residues 20 to 484 of 484 are 99 pct identical to residues 1 to 465 of a 465 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290098.1 putative cytochrome C peroxidase	Putative cytochrome C peroxidase	Putative uncharacterized protein	IPR000345: Cytochrome c heme-binding site putative cytochrome c peroxidase	similar to Salmonella typhi CT18 probable cytochrome c peroxidase probable cytochrome c peroxidase	Putative cytochrome C peroxidase	COG1858 cytochrome c peroxidase	cytochrome c peroxidase	Almost identical to the previously sequenced Bacteroides fragilis cytochrome-C peroxidase Ccp SWALL:Q938I4 (EMBL:AY050657) (464 aa) fasta scores: E(): 2.6e-174, 96.98% id in 464 aa, and similar to Escherichia coli probable cytochrome C peroxidase YhjA or B3518 SWALL:YHJA_ECOLI (SWALL:P37197) (465 aa) fasta scores: E(): 1.2e-77, 49.87% id in 413 aa, and to Pseudomonas aeruginosa cytochrome C551 peroxidase precursor CcpA or PA4587 SWALL:CCPR_PSEAE (SWALL:P14532) (346 aa) fasta scores: E(): 1.8e-35, 39.81% id in 319 aa cytochrome-C peroxidase	Cytochrome c peroxidase MauG protein	Cytochrome c551 peroxidase, putative	Putative cytochrome c peroxidase	Cytochrome c peroxidase	Code: P; COG: COG1858 putative cytochrome C peroxidase	Code: P; COG: COG1858 putative cytochrome C peroxidase	Di-haem cytochrome c peroxidase	Cytochrome-c peroxidase	Putative uncharacterized protein	Putative cytochrome C peroxidase	putative cytochrome C peroxidase	Di-haem cytochrome c peroxidase	
ECOLI03389	Cytoplasmic trehalase	Cytoplasmic trehalase	Cytoplasmic trehalase	cytoplasmic trehalase (alpha,alpha-trehalose glucohydrolase)	Cytoplasmic trehalase	Residues 1 to 549 of 549 are 99 pct identical to residues 1 to 549 of a 549 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290099.1 cytoplasmic trehalase	IPR001661: Glycoside hydrolase, family 37 cytoplasmic trehalase	similar to Salmonella typhi CT18 cytoplasmic trehalase cytoplasmic trehalase	Cytoplasmic trehalase	Code: G; COG: COG1626 cytoplasmic trehalase	Code: G; COG: COG1626 cytoplasmic trehalase	Cytoplasmic trehalase	Cytoplasmic trehalase	Alpha,alpha-trehalase PFAM: glycoside hydrolase, family 37 KEGG: spt:SPA3459 cytoplasmic trehalase	Periplasmic trehalase	cytoplasmic trehalase Code: G; COG: COG1626	neutral trehalase	cytoplasmic trehalase	Alpha,alpha-trehalase	Cytoplasmic trehalase	Putative uncharacterized protein	Cytoplasmic trehalase	Putative periplasmic trehalase protein	Cytoplasmic trehalase	Cytoplasmic trehalase	Cytoplasmic trehalase	Cytoplasmic trehalase TreF	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03390	Putative HTH-type transcriptional regulator yhjB	Hypothetical transcriptional regulator yhjB	Putative regulator	Residues 1 to 200 of 200 are 99 pct identical to residues 1 to 200 of a 200 aa protein from Escherichia coli K12 ref: NP_417977.1 putative regulator	IPR000792: Bacterial regulatory protein, LuxR family putative transcriptional regulator (LuxR/UhpA familiy)	similar to Salmonella typhi CT18 hypothetical luxR-family transcriptional regulator hypothetical luxR-family transcriptional regulator	Putative transcriptional regulator	Code: TK; COG: COG2197 putative regulator	Code: TK; COG: COG2197 putative regulator	two component transcriptional regulator, LuxR family PFAM: regulatory protein, LuxR: (3.4e-17) response regulator receiver: (1e-22) KEGG: sil:SPO0161 DNA-binding response regulator, LuxR family, ev=1e-50, 51% identity	Hypothetical transcriptional regulator YhjB	Transcription regulator, putative	Hypothetical transcriptional regulator YhjB	putative regulator Code: TK; COG: COG2197	putative DNA-binding response regulator in two-component regulatory system	Putative uncharacterized protein	Transcriptional regulator, LuxR family	Two component transcriptional regulator, LuxR family	Predicted DNA-binding response regulator in two- component regulatory system	Transcriptional regulator, LuxR family	Two component transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Putative uncharacterized protein	Transcriptional regulator, LuxR family	Hypothetical luxR-family transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Hypothetical luxR-family transcriptional regulator	
ECOLI03391	Uncharacterized HTH-type transcriptional regulator yhjC	Hypothetical transcriptional regulator yhjC	Putative transcriptional regulator LYSR-type	Residues 1 to 323 of 323 are 98 pct identical to residues 1 to 323 of a 323 aa protein from Escherichia coli K12 ref: NP_417978.1 putative transcriptional regulator LYSR-type	Putative LysR family transcriptional regulator	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Hypothetical transcriptional regulator YhjC	Hypothetical transcriptional regulator YhjC	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: mlo:mlr1992 probable transcriptional regulator	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	putative DNA-binding transcriptional regulator YhjC	Transcriptional regulator, LysR family	Putative transcriptional regulator	Putative uncharacterized protein	Transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative uncharacterized protein	Putative uncharacterized protein	Transcriptional regulator, LysR family	LysR substrate binding domain protein	LysR substrate binding domain protein	LysR substrate binding domain protein	Hypothetical lysR-family transcriptional regulator	
ECOLI03392	Inner membrane protein yhjD	Narrowly conserved hypothetical membrane protein	Putative membrane protein	Membrane protein ribonuclease BN-like family	Putative membrane protein	putative membrane protein	RNase BN	Hypothetical protein yhjD	Putative membrane protein	Putative uncharacterized protein	Putative tRNA-processing ribonuclease	Putative membrane protein	Putative uncharacterized protein yhjD	similar to AX066191-1|CAC26334.1| percent identity: 73 in 361 aa conserved hypothetical protein	SC5G8.14, possible integral membrane protein, len: 321aa; weakly similar to many eg. SW:P45417 (YHJD_ERWCH) hypothetical protein from Erwinia chrysanthemi (328 aa) fasta scores; opt: 305, z-score: 344.6, E(): 9.7e-12, 29.7% identity in 283 aa overlap. Contains possible membrane-spanning hydrophobic regions. putative integral membrane protein	Residues 1 to 337 of 337 are 100 pct identical to residues 1 to 337 of a 337 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290102.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to putative membrane protein YhjD of Escherichia coli	Putative uncharacterized protein	PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN	Mb3368c, -, len: 289 aa. Equivalent to Rv3335c, len: 289 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 289 aa overlap). Probable conserved integral membrane protein, equivalent to Q49909|ML0687 PUTATIVE MEMBRANE PROTEIN U0308AA from Mycobacterium leprae (313 aa), FASTA scores: opt: 1299, E(): 8.9e-75, (68.75% identity in 288 aa overlap). Also similar to other hypothetical bacterial proteins e.g. BAB37825|ECS4402 from Escherichia coli strain O157:H7 (alias P37642|YHJD_ECOLI|B3522 strain K12) (337 aa), FASTA scores: opt: 591, E(): 4.2e-30, (35.15% identity in 273 aa overlap); P45417|YHJD_ERWCH from Erwinia chrysanthemi (328 aa), FASTA scores: opt: 500, E(): 2.2e-24, (34.9% identity in 275 aa overlap); Q9KZA0|SC5G8.14 PUTATIVE INTEGRAL MEMBRANE PROTEIN from Streptomyces coelicolor (321 aa), FASTA scores: opt: 321, E(): 4.3e-13, (27.3% identity in 271 aa overlap); etc. PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN	IPR004664: Ribonuclease BN; IPR005274: Conserved hypothetical protein 766 putative tRNA-processing ribonuclease	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Putative tRNA-processing ribonuclease	putative membrane protein	Code: S; COG: COG1295 conserved hypothetical protein	Code: S; COG: COG1295 conserved hypothetical protein	ribonuclease BN	
ECOLI03393	Inner membrane metabolite transport protein yhjE	Probable major facilitator superfamily (MFS) transporter	Hypothetical metabolite transport protein	Probable membrane transport protein	Hypothetical metabolite transport protein yhjE	Probable transporter	Major facilitator family transporter	Metabolite:proton symporter family protein	Putative transport protein	Residues 1 to 440 of 440 are 99 pct identical to residues 1 to 440 of a 440 aa protein from Escherichia coli K12 ref: NP_417980.1 putative transport protein	Putative metabolite transport transmembrane protein	ABC transporter	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark metabolite transport protein	IPR000911: Ribosomal protein L11; IPR004736: Citrate-proton symport; IPR005828: General substrate transporter;IPR005829: Sugar transporter superfamily;IPR007114: Major facilitator superfamily putative MFS family transport protein	similar to Salmonella typhi CT18 hypothetical metabolite transport protein hypothetical metabolite transport protein	Metabolite transport protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transport protein (MFS superfamily)	Metabolite-proton symporter	Putative MFS family transport protein	metabolite transport protein	identified by match to protein family HMM PF00083; match to protein family HMM PF07690 major facilitator family transporter	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	General substrate transporter	Major facilitator superfamily (MFS_1) transporter	Code: GEPR; COG: COG0477 putative transport protein	putative transmembrane transporter protein similarity:fasta; with=UniProt:Q92NM2_RHIME (EMBL:SME591789); Rhizobium meliloti (Sinorhizobium meliloti).; PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN.; length=436; id 76.765; 439 aa overlap; query 3-439; subject 1-434	General substrate transporter	metabolite:H+ symporter family protein	
ECOLI03394	Uncharacterized protein yhjG	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Hypothetical protein yhjG	Exported protein, conserved	Exported protein, conserved	Putative uncharacterized protein	Exported protein, conserved	AsmA family protein	Putative uncharacterized protein yhjG	Residues 1 to 691 of 691 are 99 pct identical to residues 1 to 691 of a 691 aa protein from Escherichia coli K12 ref: NP_417981.1 orf, conserved hypothetical protein	Putative exported protein	Putative involved in outer membrane biogenesis transmembrane protein	IPR007844: AsmA putative inner membrane protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	Hypothetical membrane-spanning protein	identified by match to protein family HMM PF05170 AsmA family protein	identified by match to protein family HMM PF05170 AsmA family superfamily	AsmA	AsmA	Code: M; COG: COG2982 conserved hypothetical protein	conserved hypothetical protein	Code: M; COG: COG2982 conserved hypothetical protein	
ECOLI03395	Uncharacterized protein yhjH	Hypothetical protein yhjH	Putative uncharacterized protein	Putative uncharacterized protein yhjH	Residues 1 to 237 of 237 are 99 pct identical to residues 19 to 255 of a 255 aa protein YHJH_ECOLI sp: P37646 orf, conserved hypothetical protein	Putative uncharacterized protein	IPR001633: EAL domain putative Diguanylate cyclase/phosphodiesterase domain 3	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative diguanylate cyclase/phosphodiesterase domain 3 containing protein	Code: T; COG: COG2200 conserved hypothetical protein	Code: T; COG: COG2200 conserved hypothetical protein	Code: T; COG: COG2200; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yhjH	Hypothetical protein precursor	Hypothetical protein	conserved hypothetical protein Code: T; COG: COG2200	Hypothetical protein precursor	conserved hypothetical protein	Diguanylate phosphodiesterase	Putative uncharacterized protein	Cyclic diguanylate phosphodiesterase	Diguanylate phosphodiesterase	EAL domain containing protein involved in flagellar function	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Cyclic diguanylate phosphodiesterase	Diguanylate phosphodiesterase	
ECOLI03396	2-dehydro-3-deoxygluconokinase	2-dehydro-3-deoxygluconokinase	2-dehydro-3-deoxygluconokinase	2-dehydro-3-deoxygluconokinase	putative 2-dehydro-3-deoxygluconokinase	2-dehydro-3-deoxygluconokinase	similar to SP:P37647; identified by sequence similarity; putative 2-dehydro-3-deoxygluconokinase, putative	2-dehydro-3-deoxygluconokinase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE 2-DEHYDRO-3-DEOXYGLUCONOKINASE PROTEIN	2-dehydro-3-deoxygluconokinase	2-DEHYDRO-3-DEOXYGLUCONOKINASE	Putative 2-dehydro-3-deoxygluconokinase	Ketodeoxygluconokinase	2-dehydro-3-deoxygluconokinase	2-dehydro-3-deoxygluconokinase	Sugar kinase, ribokinase family	Residues 44 to 425 of 425 are 98 pct identical to residues 1 to 382 of a 382 aa protein from Escherichia coli O157:H7 ref: NP_312433.1 ketodeoxygluconokinase	2-dehydro-3-deoxygluconokinase	2-dehydro-3-deoxygluconokinase protein	IPR002173: Carbohydrate kinase, PfkB ketodeoxygluconokinase	similar to Salmonella typhi CT18 2-dehydro-3-deoxygluconokinase 2-dehydro-3-deoxygluconokinase	similar to BR0858, this region contains an alternative stop codon seven codons downstream of those of other brucellae loci of BR0858 gb:AAL52289.1, hypothetical 2-dehydro-3-deoxygluconokinase hypothetical 2-dehydro-3-deoxygluconokinase	2-dehydro-3-deoxygluconokinase	Ketodeoxygluconokinase	identified by similarity to SP:P45416; match to protein family HMM PF00294 2-dehydro-3-deoxygluconokinase	identified by similarity to SP:P45416; match to protein family HMM PF00294 2-dehydro-3-deoxygluconokinase	Carbohydrate kinase, PfkB	Code: G; COG: COG0524 ketodeoxygluconokinase	pseudo Carbohydrate kinase, PfkB	
ECOLI03397	Protein yhjJ	Protein yhjJ	Protein yhjJ	Putative peptidase	Putative uncharacterized protein yhjJ	Residues 1 to 498 of 498 are 99 pct identical to residues 1 to 498 of a 498 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290107.1 orf, conserved hypothetical protein	Putative insulinase family protease	Similar to unknown protein YhjJ of Escherichia coli	IPR001092: Basic helix-loop-helix dimerization domain bHLH; IPR001431: Peptidase M16, insulinase-like; IPR007863: Peptidase M16 inactive putative Zn-dependent peptidase	similar to Salmonella typhi CT18 putative zinc-protease precursor putative zinc-protease precursor	Putative insulinase family protease	Protein yhjJ	Code: R; COG: COG0612 conserved hypothetical protein	Code: R; COG: COG0612 conserved hypothetical protein	Code: R; COG: COG0612; orf conserved hypothetical protein	Protein YhjJ	Putative insulinase family protease precursor	Protein YhjJ	Insulinase family protease precursor	Putative insulinase family protease precursor	conserved hypothetical protein Code: R; COG: COG0612	Insulinase family protease precursor	putative zinc-dependent peptidase	Putative zinc protease	Peptidase M16 domain protein precursor	Putative peptidase	Putative uncharacterized protein	Peptidase, M16 (Pitrilysin) family	Peptidase M16 domain protein precursor	
ECOLI03398	Aerobic C4-dicarboxylate transport protein	Putative C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	Aerobic C4-dicarboxylate transport protein	Na+/H+-dicarboxylate symporters	C4-dicarboxylate transport protein	Aerobic C4-dicarboxylate transport protein	identified by match to protein family HMM PF00375 C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	PUTATIVE C4-DICARBOXYLATE TRANSPORT PROTEIN ,	C4-dicarboxylate transport system (permease)	Putative sodium:dicarboxylate symporter	Aerobic C4-dicarboxylate transport protein	Na+/H+ dicarboxylate symporter	SC6A11.12, possible sodium:dicarboxylate symporter, len: 466 aa; similar to many e.g. SW:P50334 (DCTA_SALTY) C4-dicarboxylate transport protein from Salmonella typhimurium (428 aa) fasta scores: opt: 1320, z-score: 1451.6, E(): 0, 48.9% identity in 419 aa overlap. Contains Pfam match to entry PF00375 SDF, Sodium:dicarboxylate symporter family putative sodium:dicarboxylate symporter	Residues 1 to 428 of 428 are 99 pct identical to residues 1 to 428 of a 428 aa protein from Escherichia coli K12 ref: NP_417985.1 uptake of C4-dicarboxylic acids	C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	Similar to C4-dicarboxylate transport protein hypothetical protein	C4-dicarboxylate transport protein	identified by similarity to SP:P37312; match to protein family HMM PF00375 C4-dicarboxylate transport protein	IPR001991: Sodium:dicarboxylate symporter DAACS family, C4-dicarboxylic acids transport protein	similar to Salmonella typhi CT18 C4-dicarboxylate transport protein C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter aerobic C4-dicarboxylate transport protein	C4-dicarboxylate transporter	C4-dicarboxylate transport protein	Similar to DTA2_PSEAE (Q9I4F5) C4-dicarboxylate transport protein from Pseudomonas aeruginosa (436 aa).  FASTA: opt: 1534 Z-score: 1703.1 E(): 5.7e-87 Smith-Waterman score: 1534; 55.206identity in 413 aa overlap. C4-dicarboxylate transport protein	
ECOLI03398	Aerobic C4-dicarboxylate transport protein	Putative C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	Aerobic C4-dicarboxylate transport protein	Na+/H+-dicarboxylate symporters	C4-dicarboxylate transport protein	Aerobic C4-dicarboxylate transport protein	identified by match to protein family HMM PF00375 C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	PUTATIVE C4-DICARBOXYLATE TRANSPORT PROTEIN ,	C4-dicarboxylate transport system (permease)	Putative sodium:dicarboxylate symporter	Aerobic C4-dicarboxylate transport protein	Na+/H+ dicarboxylate symporter	SC6A11.12, possible sodium:dicarboxylate symporter, len: 466 aa; similar to many e.g. SW:P50334 (DCTA_SALTY) C4-dicarboxylate transport protein from Salmonella typhimurium (428 aa) fasta scores: opt: 1320, z-score: 1451.6, E(): 0, 48.9% identity in 419 aa overlap. Contains Pfam match to entry PF00375 SDF, Sodium:dicarboxylate symporter family putative sodium:dicarboxylate symporter	Residues 1 to 428 of 428 are 99 pct identical to residues 1 to 428 of a 428 aa protein from Escherichia coli K12 ref: NP_417985.1 uptake of C4-dicarboxylic acids	C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	Similar to C4-dicarboxylate transport protein hypothetical protein	C4-dicarboxylate transport protein	identified by similarity to SP:P37312; match to protein family HMM PF00375 C4-dicarboxylate transport protein	IPR001991: Sodium:dicarboxylate symporter DAACS family, C4-dicarboxylic acids transport protein	similar to Salmonella typhi CT18 C4-dicarboxylate transport protein C4-dicarboxylate transport protein	C4-dicarboxylate transport protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter aerobic C4-dicarboxylate transport protein	C4-dicarboxylate transporter	C4-dicarboxylate transport protein	Similar to DTA2_PSEAE (Q9I4F5) C4-dicarboxylate transport protein from Pseudomonas aeruginosa (436 aa).  FASTA: opt: 1534 Z-score: 1703.1 E(): 5.7e-87 Smith-Waterman score: 1534; 55.206identity in 413 aa overlap. C4-dicarboxylate transport protein	
ECOLI03399	Protein yhjK	Slr1103 protein	GGDEF family protein	Putative uncharacterized protein STY4188	Protein yhjK	GGDEF family protein	GGDEF domain protein	Putative uncharacterized protein yhjK	BH2971 protein	Residues 12 to 662 of 662 are 99 pct identical to residues 1 to 651 of a 651 aa protein from Escherichia coli K12 ref: NP_417986.1 orf, conserved hypothetical protein	Putative membrane protein	conserved gene diguanylate cyclase/phosphodiesterase domain 2	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark GGDEF family protein	IPR000160: GGDEF; IPR001633: EAL domain; IPR003660: Histidine kinase, HAMP region putative Diguanylate cyclase/phosphodiesterase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative membrane protein	GGDEF domain protein	Putative diguanylate cyclase/phosphodiesterase	Phospholipase A2 family protein	identified by match to protein family HMM PF00563; match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM TIGR00254 GGDEF domain protein	PAS:GGDEF	putative phosphodiesterase	Code: T; COG: COG2200 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy putative HAMP domain/GGDEF domain/EAL domain protein	Code: T; COG: COG2200 conserved hypothetical protein	Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)	Code: T; COG: COG2200; orf conserved hypothetical protein	diguanylate cyclase/phosphodiesterase TIGRFAM: GGDEF domain: (6.5e-31) PFAM: GGDEF: (5.2e-30) EAL: (6.7e-109) KEGG: mag:amb4494 predicted signal transduction protein containing a membrane domain, ev=8e-90, 35% identity	Putative uncharacterized protein	
ECOLI03400	Cellulose synthase operon protein C	Putative cellulose biosynthesis protein	hypothetical protein	Cellulose synthase operon protein C	Cellulose synthase protein C	Cellulose synthase operon protein C	similar to Escherichia coli K12 putative oxidoreductase subunit gi: 2367239 (1167 aa). BLAST with identity of 98% in 785 aa. This CDS contains deletion. The sequence has been checked and is believed to be correct. pseudo	Cellulose synthase, subunit C	IPR001440: TPR repeat; IPR008410: Cellulose synthase operon C, C-terminal putative TPR-repeat-containing protein	similar to Salmonella typhimurium putative TPR-repeat-containing protein putative TPR-repeat-containing protein	cellulose synthase operon C protein	Cellulose synthase operon C protein, putative	Cellulose synthase operon protein C	TPR repeat:Cellulose synthase operon C, C-terminal:Tetratricopeptide TPR_4	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11260463; Product type e : enzyme cellulose synthase operon protein C	Code: R; COG: COG0457 putative oxidoreductase subunit	Cellulose synthase operon C-like protein	Cellulose synthase operon C-like precursor	cellulose synthase operon protein C identified by match to protein family HMM PF00515; match to protein family HMM PF05420; match to protein family HMM PF07719; match to protein family HMM PF07721	Putative uncharacterized protein	cellulose synthase operon C-like protein	Cellulose synthase operon protein C	cellulose synthase operon C domain protein PFAM: TPR repeat-containing protein; cellulose synthase operon C domain protein; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG: bur:Bcep18194_A4527 cellulose synthase operon C-like protein	cellulose synthase operon C domain protein PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_4 SMART: Tetratricopeptide domain protein KEGG: bcn:Bcen_0899 cellulose synthase operon C-like	cellulose synthase operon protein C identified by match to protein family HMM PF00515; match to protein family HMM PF05420; match to protein family HMM PF07719; match to protein family HMM PF07721	Probable BcsC protein involved in cellulose synthesis precursor	Cellulose synthase operon C protein, putative	cellulose synthase operon protein C	Putative cellulose synthase operon protein C	
ECOLI03401	Endoglucanase	Endoglucanase	hypothetical endoglucanase precursor	Endoglucanase	Endoglucanase	Endoglucanase	Endo-1,4-D-glucanase	Endoglucanase	Endo-1,4-D-glucanase	similar to Salmonella typhi Ty2 probable endoglucanase precursor probable endoglucanase precursor	Endoglucanase	Endo-1,4-D-glucanase	endo-1,4-beta-glucanase	Endo-1,4-beta-D-glucanase	Endoglucanase	Cellulase	Code: G; COG: COG3405 putative endoglucanase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11260463, 10102357; Product type e : enzyme Endoglucanase precursor (Endo-1, 4-beta-glucanase) (Cellulase) (Carboxymethylcellulase) (CMCase)	Code: G; COG: COG3405 putative endoglucanase	endoglucanase	Cellulase	Cellulase precursor	cellulase precursor	Cellulase	endoglucanase precursor identified by match to protein family HMM PF01270	Endoglucanase	Cellulase	glycoside hydrolase, family 8	Endoglucanase	
ECOLI03402	Cyclic di-GMP-binding protein	Cyclic di-GMP-binding protein	Cyclic di-GMP binding protein	hypothetical protein	Cyclic di-GMP binding protein	Cyclic di-GMP binding protein	Cyclic di-GMP binding protein WssC, putative	Cellulose synthase, cyclic di-GMP binding subunit	Cyclic di-GMP-binding protein	Residues 30 to 808 of 808 are 98 pct identical to residues 1 to 785 of a 785 aa protein from Escherichia coli O157:H7 ref: NP_312439.1 orf, conserved hypothetical protein	Cellulose synthase, subunit B	Cellulose synthase protein	similar to Salmonella typhi CT18 putative polysaccharide biosynthesis protein subunit B putative polysaccharide biosynthesis protein subunit B	Cyclic di-GMP-binding protein	conserved hypothetical protein	cellulose synthase regulatory subunit	Cellulose synthase, putative	Cyclic di-GMP-binding protein	Cellulose synthase, subunit B	conserved hypothetical protein	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11260463, 11929533; Product type m : membrane component putative cyclic di-GMP binding protein, cellulose synthase regulator (BcsB)	conserved hypothetical protein	Cellulose synthase, subunit B	orf conserved hypothetical protein	Cellulose synthase, subunit B precursor	cellulose synthase regulatory subunit (Cyclic di-GMP binding protein)	cyclic di-GMP binding protein identified by match to protein family HMM PF03170	cellulose synthase protein similar to CelB [Rhizobium leguminosarum] and celB (AGR_L_3024p) [Agrobacterium tumefaciens] Similar to entrez-protein:AAD28575.1 Putative location:bacterial inner membrane Psort-Score: 0.5076; go_component: membrane [goid 0016020]; go_process: UDP-glucose metabolism [goid 0006011]	Cellulose synthase regulatory subunit	
ECOLI03403	Cellulose synthase catalytic subunit	Cellulose synthase catalytic subunit	Putative glycosyltransferase	Curdlan Synthase	Cellulose synthase catalytic subunit	Putative cellulose synthase catalytic subunit	Putative cellulose synthase catalytic subunit	Cellulose synthase catalytic subunit	pseudo	Cellulose synthase, catalytic subunit	Glycosyl transferase, group 2 family protein	Cellulose synthase catalytic subunit	Cellulose synthase, subunit A	putative Glycosyl transferase, family 2	Cellulose synthase catalytic subunit	cellulose synthase catalytic subunit [UDP-forming]	Cellulose synthase, putative	Cellulose synthase catalytic subunit	Cellulose synthase (UDP-forming)	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11260463; Product type e : enzyme Cellulose synthase catalytic subunit [UDP-forming]	Code: M; COG: COG1215 putative cellulose synthase	Cellulose synthase (UDP-forming)	cellulose synthase catalytic subunit [UDP-forming]	Code: M; COG: COG1215 putative cellulose synthase	glycosyl transferase, group 2 family protein identified by match to protein family HMM PF00535	Cellulose synthase catalytic subunit	Putative glycosyltransferase	glycosyl transferase, family 2	UDP-forming cellulose synthase catalytic subunit	
ECOLI03404	Putative uncharacterized protein yhjQ	Hypothetical protein	Hypothetical protein yhjQ	Putative uncharacterized protein	Putative uncharacterized protein	Residues 1 to 250 of 250 are 98 pct identical to residues 1 to 250 of a 250 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290114.1 Uncharacterized conserved protein	Putative uncharacterized protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	hypothetical protein	Cellulose synthase, putative	Uncharacterized protein yhjQ	Code: D; COG: COG1192 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function ; putative protein yhjQ	Code: D; COG: COG1192 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhjQ	Hypothetical protein bcsF	Cellulose synthase, putative	conserved hypothetical protein Code: D; COG: COG1192	putative ATPases involved in chromosome partitioning	Cell division protein YhjQ	Cell division protein YhjQ	Putative uncharacterized protein yhjQ	Putative uncharacterized protein	YhjQ protein	YhjQ family protein precursor	cellulose synthase, putative KEGG: psa:PST_0282 cellulose synthase, putative	pseudo	Cellulose synthase operon protein YhjQ	
ECOLI03405	Uncharacterized protein yhjR	Hypothetical protein yhjR	Putative uncharacterized protein yhjR	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yhjR	Hypothetical protein	conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yhjR	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yhjR	
ECOLI03406	Uncharacterized protein yhjS	Hypothetical protein yhjS	Putative uncharacterized protein	Putative protease	Residues 1 to 523 of 523 are 100 pct identical to residues 1 to 523 of a 523 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290116.1 putative protease	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	putative protease	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 11929533; Product type e : enzyme putative protease BcsE	putative protease	Putative uncharacterized protein	Putative uncharacterized protein yhjS	Hypothetical protein bcsE	Putative protease	conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein yhjS	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	putative protease KEGG: psa:PST_0284 putative protease	Putative protease	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Cellulose biosynthesis protein BcsE	Putative uncharacterized protein	
ECOLI03407	Uncharacterized protein yhjT	Hypothetical protein yhjT	Uncharacterized protein yhjT	Residues 2 to 63 of 63 are 98 pct identical to residues 1 to 62 of a 62 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290117.1 orf, conserved hypothetical protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical membrane protein YhjT	Putative uncharacterized protein yhjT	conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein yhjT	Putative uncharacterized protein	Cellulose biosynthesis protein BcsF	Predicted protein	Putative uncharacterized protein	Cellulose biosynthesis protein BcsF	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Cellulose biosynthesis protein BcsF	Putative membrane protein	Cellulose biosynthesis operon protein BcsF/YhjT	Celllulose biosynthesis operon protein BcsF/YhjT	Celllulose biosynthesis operon protein BcsF/YhjT	Putative membrane protein	Cellulose biosynthesis protein BcsF	
ECOLI03408	Uncharacterized protein yhjU	Putative membrane protein	conserved hypothetical protein	Hypothetical protein yhjU	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein yhjU	Residues 1 to 559 of 559 are 99 pct identical to residues 1 to 559 of a 559 aa protein from Escherichia coli O157:H7 ref: NP_312445.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	conserved hypothetical protein	Putative uncharacterized protein	Putative inner membrane protein	putative membrane protein	conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; PubMedId : 11929533; Product type e : enzyme putative membrane protein ; putative endoglucanase BcsG	conserved hypothetical protein	hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	putative membrane protein	Putative uncharacterized protein yhjU	conserved hypothetical protein KEGG: bur:Bcep18194_A4531 hypothetical protein	conserved hypothetical protein KEGG: bcn:Bcen_0904 hypothetical protein	conserved hypothetical protein	Putative inner membrane protein possibly involved in cellulose synthesis	Putative membrane protein	

ECOLI03410	Inner membrane transport protein yhjV	Hypothetical transport protein yhjV	Putative transporter protein	Residues 1 to 411 of 411 are 99 pct identical to residues 13 to 423 of a 423 aa protein from Escherichia coli K12 ref: NP_417996.1 putative transporter protein	Putative transmembrane transport protein	IPR001220: Legume lectin, beta domain; IPR002422: Amino acid/polyamine transporter, family II; IPR002453: Beta tubulin putative HAAAP family transport protein	similar to Salmonella typhi CT18 putative amino acid permease putative amino acid permease	Putative HAAAP (Hydroxy/aromatic amino acid permease) family protein	Putative HAAAP family transport protein	Code: E; COG: COG0814 putative transporter protein	Code: E; COG: COG0814 putative transporter protein	Code: E; COG: COG0814 putative transporter protein	Hypothetical transport protein YhjV	Putative transmembrane transport protein	Hypothetical transport protein YhjV	Transmembrane transport protein	putative transporter protein Code: E; COG: COG0814	Transmembrane transport protein	conserved hypothetical protein	Putative uncharacterized protein	Serine transporter family protein	Predicted transporter	Putative serine transporter	Serine transporter family protein	Serine transporter	Serine transporter family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative serine transporter	
ECOLI03411	Dipeptide transport ATP-binding protein dppF	DppF	Dipeptide transport ATP-binding protein DppF	Putative dipeptide transport system ATP-binding protein	Dipeptide transport ATP-binding protein dppF	similar to GP:15073665; identified by sequence similarity; putative dipeptide ABC transporter, ATP-binding protein, putative	Dipeptide transport ATP-binding protein	Peptide transport ATP-binding protein	Dipeptide ABC transporter, ATP-binding protein	Putative ATP-binding component of dipeptide transport system	Residues 1 to 334 of 334 are 99 pct identical to residues 1 to 334 of a 334 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290121.1 putative ATP-binding component of dipeptide transport system	Dipeptide transport ATP-binding protein	Dipeptide transport ATP-binding protein dppF	Dipeptide transport system ATP-binding protein	Dipeptide ABC transporter	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter; IPR003593: AAA ATPase ABC superfamily (atp_bind), dipeptide transport protein	similar to Salmonella typhi CT18 dipeptide transport ATP-binding protein DppF dipeptide transport ATP-binding protein DppF	ABC dipeptide transporter, ATP-binding subunit	Similar to: HI1184, DPPF_HAEIN dipeptide transport ATP-binding protein	ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component OppF protein	Dipeptide ABC transporter, ATP-binding protein	Dipeptide transport protein	dipeptide transport ATP-binding protein	identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727 peptide ABC transporter, ATP-binding protein	identified by similarity to SP:P37313; match to protein family HMM PF00005; match to protein family HMM TIGR01727 peptide ABC transporter, ATP-binding protein	Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal	Code: E; COG: COG4608 putative ATP-binding component of dipeptide transport system	conserved hypothetical protein:ABC transporter:AAA ATPase ABC peptide transporter, ATPase subunit	Code: E; COG: COG4608 putative ATP-binding component of dipeptide transport system	
ECOLI03412	Dipeptide transport ATP-binding protein dppD	DppD	Probable ATP-binding component of ABC transporter	ABC transporter, nucleotide binding/ATPase protein	Dipeptide transport ATP-binding protein DppD	Oligopeptide transport ATP-binding protein oppD	Oligopeptide ABC transporter, ATP-binding protein	Putative dipeptide transport system ATP-binding protein	Dipeptide transport ATP-binding protein dppD	identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727 oligopeptide ABC transporter, ATP-binding protein	identified by match to PFAM protein family HMM PF03800 dipeptide ABC transporter, ATP-binding protein, putative	Dipeptide transport ATP-binding protein	Oligopeptide transport ATP-binding protein oppD	Dipeptide ABC transporter, ATP-binding protein	Peptide ABC transporter, ATP-binding protein	DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPD	Dipeptide transport ATP-binding protein dppD	ABC transporter ATP-binding component	Oligopeptide ABC transporter	Residues 1 to 327 of 327 are 100 pct identical to residues 1 to 327 of a 327 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290122.1 putative ATP-binding component of dipeptide transport system	Dipeptide transport ATP-binding protein	Dipeptide transport ATP-binding protein dppD	Probable ATP-binding component of ABC transporter	Dipeptide ABC transporter	IPR003439: ABC transporter; IPR003593: AAA ATPase ABC superfamily (atp_bind), dipeptide transport protein	similar to Salmonella typhi CT18 dipeptide transport ATP-binding protein DppD dipeptide transport ATP-binding protein DppD	similar to BR1583, dipeptide ABC transporter, ATP-binding protein, hypothetical hypothetical dipeptide ABC transporter, ATP-binding protein	ABC dipeptide transporter, ATP-binding subunit	Similar to: HI1185, DPPD_HAEIN dipeptide transport ATP-binding protein	
ECOLI03413	Dipeptide transport system permease protein dppC	Dipeptide transport system permease protein dppC	Probable dipeptide transport system permease protein dppC	DppC-2 dipeptide ABC transporter, permease protein	DppC	Probable permease of ABC transporter	ABC transporter, membrane spanning protein	Dipeptide transport system permease protein DppC	Putative dipeptide transport system permease protein	Dipeptide transport system permease protein dppC	similar to GP:15159154, and SP:P94312; identified by sequence similarity; putative dipeptide ABC transporter, permease protein	Dipeptide transport system permease protein	Oligopeptide ABC transporter permease protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN	Dipeptide ABC transporter, permease protein	DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPC	Dipeptide transport system permease protein dppC	ABC transporter permease protein	Residues 1 to 300 of 300 are 99 pct identical to residues 1 to 300 of a 300 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290123.1 dipeptide transport system permease protein 2	Dipeptide transport system permease protein	Dipeptide transport system permease protein DppC	Dipeptide transport system permease protein	Dipeptide ABC transporter	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), dipeptide transport protein 2	similar to Salmonella typhi CT18 dipeptide transport system permease protein DppC dipeptide transport system permease protein DppC	similar to BR1584, dipeptide ABC transporter, permease protein dipeptide ABC transporter, permease protein	ABC dipeptide transporter, permease subunit	Similar to: HI1186, DPPC_HAEIN dipeptide transport system permease protein	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components DppC protein	
ECOLI03414	Dipeptide transport system permease protein dppB	Dipeptide transport system permease protein dppB	DppB	Probable permease of ABC transporter	Dipeptide transport system permease protein dppB	ABC transporter, membrane spanning protein	Dipeptide transport system permease protein DppB	Putative dipeptide transport system permease protein	Dipeptide transport system permease protein dppB	similar to GP:15159155, and SP:P94311; identified by sequence similarity; putative dipeptide ABC transporter, permease protein	ABC-type dipeptide/oligopeptide transport system, permease component	Dipeptide transport system permease protein	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN	Dipeptide ABC transporter, permease protein	Dipeptide ABC transporter, permease protein	Dipeptide ABC transporter, permease protein	DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB	Dipeptide transport system permease protein dppB	ABC transporter permease protein	Dipeptide ABC transporter	Residues 1 to 339 of 339 are 99 pct identical to residues 1 to 339 of a 339 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290124.1 dipeptide transport system permease protein 1	Dipeptide transport system permease protein	Dipeptide transport system permease protein DppB	Dipeptide transport system permease protein	Dipeptide ABC transporter	Peptide ABC transporter, permease protein	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), dipeptide transport protein 1	similar to Salmonella typhi CT18 dipeptide transport system permease protein DppB dipeptide transport system permease protein DppB	similar to BR1585, dipeptide ABC transporter, permease protein dipeptide ABC transporter, permease protein	

ECOLI03415	Periplasmic dipeptide transport protein	DppA	ABC transporter, substrate binding protein	Periplasmic dipeptide transport protein	Putative periplasmic dipeptide transport protein	Periplasmic dipeptide transport protein	Periplasmic dipeptide transport protein	Oligopeptide permease	Dipeptide ABC transporter, periplasmic didpeptide -binding protein	PERIPLASMIC DIPEPTIDE TRANSPORT PROTEIN	Dipeptide transport protein	ABC transporter solute-binding component	Residues 1 to 535 of 535 are 100 pct identical to residues 1 to 535 of a 535 aa protein from Escherichia coli O157:H7 ref: NP_312451.1 dipeptide transport protein	Periplasmic dipeptide transport protein	Periplasmic dipeptide transport protein DppA	Oligopeptide-binding protein OppA	Dipeptide ABC transporter	IPR000914: Bacterial extracellular solute-binding protein, family 5 ABC superfamily (peri_perm), dipeptide transport protein	similar to Salmonella typhi CT18 periplasmic dipeptide transport protein precursor periplasmic dipeptide transport protein precursor	ABC transporter, periplasmic dipeptide binding protein	best blastp match emb|CAA61522.1| (X89237) oligopeptide permease [Streptococcus pyogenes] oligopeptide permease	ABC transporter substrate-binding protein - oligopeptide transport	Dipeptide transport protein	identified by similarity to SP:P36634; match to protein family HMM PF00496 peptide ABC transporter, periplasmic peptide-binding protein	identified by match to protein family HMM PF00496 dipeptide ABC transporter, periplasmic dipeptide-binding protein	identified by similarity to SP:P23847; match to protein family HMM PF00496 dipeptide ABC transporter, periplasmic peptide-binding protein	extracellular solute-binding protein, family 5	Code: E; COG: COG0747 dipeptide transport protein	dipeptide ABC transporter periplasmic component	

ECOLI03416	UPF0141 inner membrane protein yhjW	Putative membrane protein	Membrane-protein yhjW	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein yhjW	Putative uncharacterized protein RP329	Residues 1 to 574 of 574 are 99 pct identical to residues 1 to 574 of a 574 aa protein from Escherichia coli K12 ref: NP_418002.1 orf, conserved hypothetical protein	Putative membrane protein	IPR000917: Sulfatase putative membrane-associated, metal-dependent hydrolase	Putative membrane protein	Phosphoethanolamine transferase eptB	unknown	Code: R; COG: COG2194 conserved hypothetical protein	Code: R; COG: COG2194 conserved hypothetical protein	Putative membrane-associated metal-dependent hydrolase	Hypothetical membrane protein YhjW	Putative membrane protein	Membrane-protein YhjW	Membrane protein	Putative membrane protein	conserved hypothetical protein Code: R; COG: COG2194	Membrane protein	predicted metal dependent hydrolase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase	Putative membrane-associated metal-dependent hydrolase	
ECOLI03417	Inner membrane protein yhjX	similar to CA1798|IPF11448 Candida albicans IPF11448 unknown function, hypothetical start	similar to sgd|S0002212 Saccharomyces cerevisiae YDL054c, start by similarity	Permease	putative resistance protein, yhjX	Hypothetical protein yhjX	Putative oxalate/formate antiporter	Putative resistance protein	Residues 16 to 417 of 417 are 98 pct identical to residues 1 to 402 of a 402 aa protein from Escherichia coli K12 ref: NP_418003.1 putative resistance protein	Probable resistance protein	oxalate/formate antiporter	Code: GEPR; COG: COG0477 putative resistance protein	identified by similarity to PIR:G82445; match to protein family HMM PF07690 putative transporter	Code: GEPR; COG: COG0477 putative resistance protein	Code: GEPR; COG: COG0477 putative resistance protein	major facilitator superfamily (MFS) transporter	transcript_id=ENSGACT00000013207	Putative uncharacterized protein	Major facilitator superfamily MFS_1 precursor	Major facilitator family transporter	Putative resistance protein	Putative oxalate/formate antiporter, majorfacilitator superfamily	inner membrane protein YhjX identified by match to protein family HMM PF07690	Major facilitator superfamily protein	putative resistance protein Code: GEPR; COG: COG0477	Major facilitator superfamily MFS_1 precursor	putative transporter putative permease	Putative membrane protein	hypothetical protein	
ECOLI03418	Uncharacterized protein yhjY	Hypothetical protein yhjY	Putative lipase	Residues 1 to 234 of 234 are 98 pct identical to residues 1 to 234 of a 234 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290133.1 putative lipase	putative lipase	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative lipase	Code: N; COG: COG5571 putative lipase	Code: N; COG: COG5571 putative lipase	Putative uncharacterized protein	Putative uncharacterized protein yhjY	putative lipase Code: N; COG: COG5571	conserved hypothetical protein	Putative lipase precursor	Putative lipase	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative lipase precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative lipase	Putative lipase	Putative lipase	
ECOLI03419	DNA-3-methyladenine glycosylase 1	DNA-3-methyladenine glycosylase I	DNA-3-methyladenine glycosylase	DNA-3-methyladenine glycosylase I	Putative DNA-3-methyladenine glycosylase I	DNA-3-methyladenine glycosylase I	DNA-3-methyladenine glycosylase I	DNA-3-methyladenine glycosylase I	DNA-3-methyladenine glycosylase I	TagI	DNA-3-methyladenine glycosidase I	3-methyladenine DNA glycosylase	DNA-3-methyladenine glycosidase I tag	3-methyladenine-DNA glycosylase	3-methyladenine DNA glycosylase I, constitutive	Probable DNA-3-methyladenine glycosylase I	Lmo1639 protein	3-Methyladenine DNA glycosylase	DNA-3-methyladenine glycosidase I	DNA-3-methyladenine glycosylase I	DNA-3-methyladenine glycosylase I	DNA-3-methyladenine glycosylase I	DNA-3-methyladenine glycosylase I	identified by match to TIGR protein family HMM TIGR00624 DNA-3-methyladenine glycosidase I	DNA-3-methyladenine glycosylase I	DNA-3-methyladenine glycosidase I	Putative hydrolase	Putative hydrolase	DNA-3-methyladenine glycosidase I	
ECOLI03421	Biotin sulfoxide reductase	Biotin sulfoxide reductase	Biotin sulfoxide reductase	Biotin sulfoxide reductase	Residues 1 to 777 of 777 are 98 pct identical to residues 1 to 777 of a 777 aa protein BISC_ECOLI sp: P20099 biotin sulfoxide reductase (BDS reductase) (BSO reductase)	IPR006655: Prokaryotic molybdopterin oxidoreductase; IPR006656: Molybdopterin oxidoreductase; IPR006657: Molydopterin dinucleotide binding domain;IPR006658: Molybdopterin guanine dinucleotide-containing S/N-oxide reductase biotin sulfoxide reductase	similar to Salmonella typhi CT18 biotin sulfoxide reductase biotin sulfoxide reductase	Putative S/N-oxide reductase	Biotin sulfoxide reductase	Code: C; COG: COG0243 biotin sulfoxide reductase	Code: C; COG: COG0243 biotin sulfoxide reductase	Code: C; COG: COG0243 biotin sulfoxide reductase	Biotin sulfoxide reductase	biotin sulfoxide reductase	Biotin sulfoxide reductase	trimethylamine-N-oxide reductase 2 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01409	dimethyl sulfoxide reductase	biotin sulfoxide reductase Code: C; COG: COG0243	biotin sulfoxide reductase	Molybdopterin guanine dinucleotide-containing S/N -oxide reductase	Biotin sulfoxide reductase	Putative uncharacterized protein	Biotin sulfoxide reductase	Molybdopterin oxidoreductase	Biotin sulfoxide reductase	Biotin sulfoxide reductase	Molybdopterin guanine dinucleotide-containing S/N -oxide reductase	Biotin sulfoxide reductase	Putative uncharacterized protein	
ECOLI03420	Uncharacterized N-acetyltransferase yiaC	Acetyltransferase (GNAT) family protein	Putative uncharacterized protein CPE0730	Probable acetyltransferase	Putative acetyltransferase	Hypothetical acetyltransferase yiaC	Putative GNAT-family acetyltransferase	best DB hits: BLAST: pir:G83613; probable acetyltransferase PA0249 [imported] -; E=7e-20 pir:S41381; hypothetical protein - Pseudomonas aeruginosa -----; E=5e-16 swissprot:P37664; YIAC_ECOLI HYPOTHETICAL 17.1 KDA PROTEIN IN; E=2e-13 COG: PA0249; COG0454 Histone acetyltransferase HPA2 and related; E=6e-21 Rv3420c; COG0456 Acetyltransferases; E=0.006 PFAM: PF00583; Acetyltransferase (GNAT) family; E=4.2e-21 probable acetyltransferase	Putative uncharacterized protein yiaC	Predicted acetyltransferase	Probable acetyltransferase	Residues 1 to 146 of 146 are 97 pct identical to residues 1 to 146 of a 146 aa protein from Escherichia coli K12 ref: NP_418006.1 orf, conserved hypothetical protein	Putative acetyltransferase	Acetyltransferase	IPR000182: GCN5-related N-acetyltransferase putative acetyltransferase	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	Putative acetyltransferase	Acetyltransferase, GNAT family	Putative acetyltransferase	Code: KR; COG: COG0454 conserved hypothetical protein	acetyltransferase (GNAT) family protein	possible acetyltransferase	Code: KR; COG: COG0454 conserved hypothetical protein	GCN5-related N-acetyltransferase	GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase: (3.5e-16) FR47-like: (0.00023) KEGG: rba:RB9493 probable acetyltransferase, ev=1e-27, 46% identity	Hypothetical acetyltransferase YiaC	Putative acetyltransferase	acetyltransferase, GNAT family identified by match to protein family HMM PF00583	Acetyltransferase, GNAT family	
ECOLI03422	Inner membrane lipoprotein yiaD	OmpA family protein	Outer membrane protein	Outer membrane protein, OmpA family	OmpA family protein	OmpA family protein	Putative uncharacterized protein	Outer membrane protein	Porin	Putative outer membrane protein	Probable outer membrane protein F	OmpA family outer membrane protein	Putative OmpA family transmembrane protein	Putative OmpA family protein	Putative outer membrane protein	Hypothetical lipoprotein yiaD	similar to GP:15157937; identified by sequence similarity; putative OmpA family protein	Lipoprotein, putative	Putative outer membrane protein	OmpA family protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	OmpA family protein	Putative outer membrane protein	Immunogenic 23 kDa lipoprotein PG3	OmpA family protein	OUTER MEMBRANE PROTEIN	Putative lipoprotein	Putative outer membrane protein	hypothetical protein	
ECOLI03423	Glyoxylate/hydroxypyruvate reductase B	Probable 2-hydroxyacid dehydrogenase	Glyoxylate/hydroxypyruvate reductase B	D-isomer specific 2-hydroxyacid dehydrogenase family protein	Gluconate 2-dehydrogenase	D-isomer specific 2-hydroxyacid dehydrogenase family protein; possible gluconate 2-dehydrogenase	2-ketogluconate reductase	2-ketogluconate reductase	identified by match to protein family HMM PF00389; match to protein family HMM PF02826 D-isomer specific 2-hydroxyacid dehydrogenase family protein	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [goid 0016616]; go_process: metabolism [goid 0008152] glycerate-and formate-dehydrogenase, putative	Glyoxylate/hydroxypyruvate reductase B	PMID: 10984043 best DB hits: BLAST: gb:AAH00605.1; AAH00605 (BC000605) glyoxylate; E=1e-66 ref:XP_005487.2; glyoxylate reductasehydroxypyruvate reductase; E=1e-66 gb:AAF51963.1; (AE003602) CG1236 gene product [Drosophila; E=7e-61 COG: APE1831; COG1052 Lactate dehydrogenase and related dehydrogenases; E=2e-60 PAB0514; COG0111 Phosphoglycerate dehydrogenase and related; E=3e-44 YNL274c; COG1052 Lactate dehydrogenase and related dehydrogenases; E=3e-34 PFAM: PF00389; D-isomer specific 2-hydroxyacid; E=2.4e-06 PF02826; D-isomer specific 2-hydroxyacid; E=2.6e-85 probable 2-hydroxyacid dehydrogenase	2-hydroxyacid dehydrogenase	Glyoxylate/hydroxypyruvate reductase B	Glycerate dehydrogenase	Residues 1 to 328 of 328 are 99 pct identical to residues 1 to 328 of a 328 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290138.1 putative dehydrogenase	Glyoxylate/hydroxypyruvate reductase B	2-ketogluconate reductase	IPR006139: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; IPR006140: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-keto-D-gluconate reductase	similar to Salmonella typhi CT18 putative 2-hydroxyacid dehydrogenase putative 2-hydroxyacid dehydrogenase	Glyoxylate/hydroxypyruvate reductase B	2-ketogluconate 6-phosphate reductase	Glyoxylate/hydroxypyruvate reductase B	D-isomer specific 2-hydroxyacid dehydrogenase family protein; possible gluconate 2-dehydrogenase	identified by similarity to PIR:F83362; match to protein family HMM PF00389; match to protein family HMM PF02826 2-ketogluconate 6-phosphate reductase, putative	Code: CHR; COG: COG1052 putative dehydrogenase	Code: CHR; COG: COG1052 putative dehydrogenase	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein identified by match to protein family HMM PF00389; match to protein family HMM PF02826	
ECOLI03424	Uncharacterized protein yiaF	Hypothetical protein yiaF	Putative lipoprotein	Putative lipoprotein	Putative exported protein	Lipoprotein, putative	Putative lipoprotein	Uncharacterized protein yiaF	Residues 1 to 276 of 276 are 100 pct identical to residues 1 to 276 of a 276 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290139.1 yiaF gene product	Putative exported protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative exported protein	Putative outer membrane lipoprotein	lipoprotein, putative	lipoprotein, putative	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yiaF	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative outer membrane lipoprotein	Putative uncharacterized protein yiaF	
ECOLI03425	Uncharacterized HTH-type transcriptional regulator yiaG	Putative HTH-type transcriptional regulator yiaG	Uncharacterized HTH-type transcriptional regulator yiaG	putative transcriptional regulator	Putative transcriptional regulator	Code: K; COG: COG2944 conserved hypothetical protein	Code: K; COG: COG2944 conserved hypothetical protein	Code: K; COG: COG2944; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yiaG	conserved hypothetical protein Code: K; COG: COG2944	putative transcriptional regulator	Helix-turn-helix domain protein	Putative transcriptional regulator	Putative uncharacterized protein	Putative uncharacterized protein	Predicted transcriptional regulator	Putative uncharacterized protein	Transcriptional regulator, XRE family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative HTH-type transcriptional regulator YiaG	pseudo	Helix-turn-helix domain protein	Helix-turn-helix domain protein	Helix-turn-helix domain protein	
ECOLI03426	Cold shock protein cspA	Cold shock protein cspA	Cold shock protein cspA	Cold shock protein cspA	Cold shock protein	SC10A5.26c, scoF5, cold-shock domain protein, len: 67 aa; highly similar to many e.g. CSPF_STRCO P48859 cold shock protein ScoF from S. coelicolor (67 aa), fasta scores; opt: 383 z-score: 750.4 E(): 0, 82.1% identity in 67 aa overlap. Contains PS00352 'Cold-shock' DNA-binding domain signature cold-shock domain protein	Residues 1 to 70 of 70 are 100 pct identical to residues 1 to 70 of a 70 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290141.1 cold shock protein 7.4, transcriptional activator of hns	IPR002059: Cold-shock DNA-binding domain Cold shock protein cspA (CSP-A)	similar to Salmonella typhi CT18 cold shock protein cold shock protein	Cold shock protein cspA	Code: K; COG: COG1278 cold shock protein 7.4, transcriptional activator of hns	transcriptional activator of hns; Code: K; COG: COG1278 cold shock protein 7.4	cold-shock DNA-binding domain protein	transcriptional activator of hns; Code: K; COG: COG1278 cold shock protein 7.4	Cold-shock DNA-binding protein family	Cold shock protein CspA	cold-shock DNA-binding domain protein	Cold shock protein 7.4, transcriptional activator of hns	cold-shock DNA-binding domain protein PFAM: Cold-shock protein, DNA-binding SMART: Cold shock protein KEGG: bur:Bcep18194_A3591 cold-shock DNA-binding domain protein	cold-shock DNA-binding domain protein PFAM: Cold-shock protein, DNA-binding SMART: Cold shock protein KEGG: bcn:Bcen_2602 cold-shock DNA-binding domain protein	cold shock protein	cold-shock DNA-binding domain protein	Cold shock protein cspA Code: K; COG: COG1278	Cold-shock family protein	Cold-shock DNA-binding protein family	Putative cold-shock DNA-binding domain protein	Cold shock protein 7.4, transcriptional activator of hns	Putative cold-shock DNA-binding domain protein	Putative uncharacterized protein	
ECOLI03426	Cold shock protein cspA	Cold shock protein cspA	Cold shock protein cspA	Cold shock protein cspA	Cold shock protein	SC10A5.26c, scoF5, cold-shock domain protein, len: 67 aa; highly similar to many e.g. CSPF_STRCO P48859 cold shock protein ScoF from S. coelicolor (67 aa), fasta scores; opt: 383 z-score: 750.4 E(): 0, 82.1% identity in 67 aa overlap. Contains PS00352 'Cold-shock' DNA-binding domain signature cold-shock domain protein	Residues 1 to 70 of 70 are 100 pct identical to residues 1 to 70 of a 70 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290141.1 cold shock protein 7.4, transcriptional activator of hns	IPR002059: Cold-shock DNA-binding domain Cold shock protein cspA (CSP-A)	similar to Salmonella typhi CT18 cold shock protein cold shock protein	Cold shock protein cspA	Code: K; COG: COG1278 cold shock protein 7.4, transcriptional activator of hns	transcriptional activator of hns; Code: K; COG: COG1278 cold shock protein 7.4	cold-shock DNA-binding domain protein	transcriptional activator of hns; Code: K; COG: COG1278 cold shock protein 7.4	Cold-shock DNA-binding protein family	Cold shock protein CspA	cold-shock DNA-binding domain protein	Cold shock protein 7.4, transcriptional activator of hns	cold-shock DNA-binding domain protein PFAM: Cold-shock protein, DNA-binding SMART: Cold shock protein KEGG: bur:Bcep18194_A3591 cold-shock DNA-binding domain protein	cold-shock DNA-binding domain protein PFAM: Cold-shock protein, DNA-binding SMART: Cold shock protein KEGG: bcn:Bcen_2602 cold-shock DNA-binding domain protein	cold shock protein	cold-shock DNA-binding domain protein	Cold shock protein cspA Code: K; COG: COG1278	Cold-shock family protein	Cold-shock DNA-binding protein family	Putative cold-shock DNA-binding domain protein	Cold shock protein 7.4, transcriptional activator of hns	Putative cold-shock DNA-binding domain protein	Putative uncharacterized protein	
ECOLI03427	Protein hokA	Putative membrane permeability altering protein	Putative membrane permeability altering protein	Putative membrane permeability altering protein	Putative membrane permeability altering protein HokA	Putative membrane permeability altering protein	Putative hok/gef cell toxic protein	Protein hokA	Hok/gef cell toxic protein	Toxic polypeptide, small	Protein hokA	Hok/gef cell toxic protein	Protein hokA	Protein hokA	Conserved domain protein	Protein HokA	Protein hokA	Putative uncharacterized protein	Small toxic membrane polypeptide HokA	HokA protein	Toxic polypeptide, small	Toxic polypeptide, small	small toxic polypeptide	Hok/gef cell toxic protein	Small toxic membrane protein HokA	
ECOLI03428	Insertion element IS150 uncharacterized 19.7 kDa protein	Probable transposase for IS150	IS3-family transposase, OrfA	Putative ISRSO11-transposase orfA protein	Complete genome	putative transposase subunit	Putative transposase	Putative uncharacterized protein	IS150 protein InsA	IS150, transposase orfA	Insertion element IS1223 hypothetical 20.7 kDa protein	Putative uncharacterized protein	Transposase IS3/IS911 family protein	IS3 family element, transposase orfA	Transposase	IS150 protein InsA	ISHin1, family IS3	IS3-family transposase, OrfA	Transposase Orf1 of IS150	InsA-30 protein	Transposase	Transposase	IS150 protein InsA	IS3-family transposase, OrfA	Transposase	IS103 orf	
ECOLI03429	Putative transposase insK for insertion sequence element IS150	Transposase	IS3-Spn1, transposase	identified by match to protein family HMM PF00665 IS3-family transposase, OrfB	Putative transposase	Product confidence : putative Gene name confidence : hypothetical putative transposase, probably encoded by an unidentified IS element protein	Putative transposase-IS861	TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS1138	Residues 1 to 283 of 283 are 99 pct identical to residues 1 to 283 of a 283 aa protein from Escherichia coli ref: NP_065294.1 orf, conserved hypothetical protein	Transposase for insertion sequence IS1661	Integrase-recombinase protein	truncated IS861, transposase (orf2), IS3 family, truncated	similar to |38639745|ref|NP_943514.1| transposase [Klebsiella pneumoniae] hypothetical protein	identified by match to PFAM protein family HMM PF00665 IS861, transposase OrfB	best blastp match gb|AAK33295.1| (AE006488) putative transposase, IS861 [Streptococcus pyogenes M1 GAS] putative transposase, IS861	truncated IS861, transposase (orf2), IS3 family, truncated	Similar to C-terminal region of Enterococcus faecium transposase TR:Q47815 (EMBL:L40841) (310 aa) fasta scores: E(): 1.9e-39, 46.183% id in 262 aa, and to the full length Neisseria gonorrhoeae hypothetical protein TR:Q50996 (EMBL:L36381) (267 aa) fasta scores: E(): 1.1e-27, 39.689% id in 257 aa putative insertion element protein	Best Blastp Hit: gb|AAA96489.1| (L36381) orfB; putative [Neisseria gonorrhoeae] putative ORF B of IS150	identified by similarity to GB:AAN00394.1; match to protein family HMM PF00665 IS861, transposase orfB	Code: L; COG: COG2801 IS150 ORF B	similar to gi|42560763|ref|NP_975214.1| [Mycoplasma mycoides subsp. mycoides SC str. PG1], percent identity 54 in 200 aa, BLASTP E(): 2e-54 putative truncated transposase	putative transposase identified by similarity to GB:CAC98906.1; match to protein family HMM PF00665	Integrase, catalytic region	Transposase	transposase (IS3 family), putative Terminal ORF of Tra island I. Element starts at nucleotide 336353 and encodes MCAP_0274-MCAP_0315. The last nucleotide of the element is 379887; identified by match to protein family HMM PF00665	Integrase, catalytic region	transposase Orthologue of HI1721	Transposase for insertion sequence IS1661	Complete genome	
ECOLI03430	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	similar to GP:2654226; identified by sequence similarity; putative glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits	Glycyl-tRNA synthetase beta subunit	Putative Glycyl-tRNA synthetase, beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase, beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta chain	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta chain	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Glycyl-tRNA synthetase beta subunit	Probable glycyl-tRNA synthetase, beta subunit	Glycyl-tRNA synthetase beta subunit	Putative glycyl-tRNA synthetase beta chain	Glycyl-tRNA synthetase, beta subunit	Putative glycyl-tRNA synthetase, beta chain	Glycyl-tRNA synthetase	
ECOLI03431	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha chain	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Glycyl-tRNA synthetase alpha subunit	Probable glycyl-tRNA synthetase alpha chain	Glycyl-tRNA synthetase, alpha subunit	Putative glycyl-tRNA synthetase, alpha chain	Glycyl-tRNA synthetase alpha chain	Glycyl-tRNA synthetase alpha subunit	
ECOLI03432	Uncharacterized lipoprotein ysaB	Uncharacterized lipoprotein ysaB precursor	Uncharacterized lipoprotein ysaB	Residues 1 to 99 of 99 are 97 pct identical to residues 1 to 99 of a 99 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290145.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Uncharacterized lipoprotein ysaB	putative lipoprotein	putative lipoprotein	orf conserved hypothetical protein	Uncharacterized lipoprotein ysaB	Uncharacterized lipoprotein ysaB	putative lipoprotein	conserved hypothetical protein putative lipoprotein	Putative uncharacterized protein	Putative outer membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative lipoprotein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03433	Inner membrane protein yiaH	Putative uncharacterized protein	Hypothetical protein yiaH	Membrane protein, putative	Putative membrane protein	Putative inner membrane protein	Putative uncharacterized protein yiaH	Residues 1 to 331 of 331 are 99 pct identical to residues 1 to 331 of a 331 aa protein from Escherichia coli K12 ref: NP_418018.1 orf, conserved hypothetical protein	Putative membrane protein	Probable transmembrane protein	Similar to unknown protein YiaH of Escherichia coli	IPR002656: Acyltransferase 3 family putative inner membrane protein	similar to Salmonella typhimurium putative inner membrane protein putative inner membrane protein	Putative membrane protein	integral membrane protein	Putative inner membrane protein	probable membrane protein	conserved hypothetical transmembrane protein	Code: S; COG: COG3274 conserved hypothetical protein	Code: S; COG: COG3274 conserved hypothetical protein	Code: S; COG: COG3274; orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein yiaH	hypothetical protein	polysaccharide biosynthesis protein (putative)	Membrane protein	Putative membrane protein	Hypothetical protein	
ECOLI03434	Inner membrane protein yiaA	Putative membrane protein	Hypothetical protein yiaA	Putative uncharacterized protein	Putative uncharacterized protein yiaA	Residues 1 to 146 of 146 are 99 pct identical to residues 1 to 146 of a 146 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290147.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Probable transmembrane protein	conserved hypothetical protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark membrane protein	Membrane protein	Putative uncharacterized protein	hypothetical protein	membrane protein	Code: S; COG: COG4682 conserved hypothetical protein	YiaAB two helix membrane protein	YiaAB two helix precursor	putative membrane protein	Hypothetical membrane protein YiaA	Hypothetical protein	membrane protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	YiaAB two helix precursor	Putative uncharacterized protein yiaA	YiaAB two helix domain protein PFAM: YiaAB two helix domain protein KEGG: bur:Bcep18194_A3880 YiaAB two helix membrane protein	conserved hypothetical protein; probable membrane protein	Hypothetical protein	YiaAB two helix domain protein PFAM: YiaAB two helix domain protein KEGG: bcn:Bcen_0307 YiaAB two helix	conserved hypothetical protein Code: S; COG: COG4682	Hypothetical protein	
ECOLI03435	Inner membrane protein yiaB	Hypothetical protein yiaB	Putative uncharacterized protein yiaB	Residues 11 to 127 of 127 are 100 pct identical to residues 1 to 117 of a 117 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290148.1 orf, conserved hypothetical protein	IPR008024: YiaAB two helix putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	Code: S; COG: COG4682 conserved hypothetical protein	Code: S; COG: COG4682 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yiaB	conserved hypothetical protein Code: S; COG: COG4682	conserved hypothetical protein putative inner membrane protein	Putative uncharacterized protein yiaB	Putative uncharacterized protein	Putative membrane protein	Conserved inner membrane protein	Putative membrane protein	YiaAB two helix domain protein precursor	Putative membrane protein	Putative uncharacterized protein	YiaA/B two helix domain family protein	Putative membrane protein	Putative inner membrane protein	Putative inner membrane protein	YiaA/B two helix domain family	Putative membrane protein	Putative membrane protein	YiaA/B two helix domain protein	
ECOLI03436	Xylulose kinase	Sugar kinase, FGGY family	Xylulokinase	Xylulose kinase	putative xylulose kinase	Xylulose kinase	identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312 xylulokinase	Xylulose kinase	PMID: 9495747 best DB hits: BLAST: gb:AAC46146.1; (AF001974) xylulose kinase; XylB; E=1e-108 swissprot:P39211; XYLB_BACSU XYLULOSE KINASE (XYLULOKINASE); E=4e-79 ddbj:BAB06475.1; (AP001516) xylose kinase [Bacillus halodurans]; E=5e-76 COG: BS_xylB; COG1070 Sugar (pentulose and hexulose) kinases; E=4e-80 PAB2406; COG0554 Glycerol kinase; E=2e-31 APE0017; COG1070 Sugar (pentulose and hexulose) kinases; E=1e-27 PFAM: PF00370; FGGY family of carbohydrate kinas; E=6e-96 PF02782; FGGY family of carbohydrate kinas; E=7.6e-63 xylulose kinase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE XYLULOSE KINASE PROTEIN	xylose kinase (xylulokinase)	Xylulokinase	CDS_ID OB3118; xylulokinase xylose kinase (xylulokinase)	Xylulose kinase	Xylose kinase	Residues 1 to 484 of 484 are 99 pct identical to residues 1 to 484 of a 484 aa protein from Escherichia coli K12 ref: NP_418021.1 xylulokinase	Xylulose kinase	identified by similarity to EGAD:108807; match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312 D-xylulose kinase	identified by similarity to SP:P09099; match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312 xylulokinase	Xylulokinase	Gluconokinase	InterProMatches:IPR006000; Molecular Function: xylulokinase activity (GO:0004856), Biological Process: xylulose metabolism (GO:0005997) xylulose kinase	Xylulose kinase	IPR000577: Carbohydrate kinase, FGGY; IPR006000: Xylulokinase xylulokinase	similar to Salmonella typhi CT18 xylulose kinase xylulose kinase	Xylulose kinase	, predicted protein, len = 488 aa, probably xylulokinase; predicted pI = 8.1316; good similarity to many bacterial xylulokinase proteins; contains a FGGY family of carbohydrate kinases, N-terminal domain and a FGGY family of carbohydrate kinases, C-terminal domain xylulokinase, putative	Sugar (pentulose and hexulose) kinases XylB protein	Xylulokinase	
ECOLI03437	Xylose isomerase	Xylose isomerase	Xylose isomerase	Xylose isomerase	Xylose isomerase	Xylose isomerase	Xylose isomerase	Xylose isomerase	Xylose isomerase	Xylose isomerase	putative D-xylose isomerase	Xylose isomerase	identified by similarity to SP:P04788; match to protein family HMM PF00259 xylose isomerase	similar to GP:15075919, GB:X02596, GB:U07000, GB:X14676, GB:X14677, GB:M17542, GB:M24603, SP:P11274, PID:487345, PID:487346, PID:487347, and PID:930044; identified by sequence similarity; putative xylose isomerase	Xylose isomerase	PMID: 1368665 PMID: 9495747 best DB hits: BLAST: swissprot:P22842; XYLA_THEET XYLOSE ISOMERASE ----- pir:; E=1e-155 gb:AAC46145.1; (AF001974) xylose isomerase; XylA; E=1e-155 swissprot:P19148; XYLA_THETU XYLOSE ISOMERASE ----- pir:; E=1e-153 COG: BH2757; COG2115 Xylose isomerase; E=1e-149 PFAM: PF00259; Xylose isomerase; E=1.5e-221 xylose isomerase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE XYLOSE ISOMERASE PROTEIN	Xylose isomerase	xylose isomerase	Xylose isomerase	Xylose isomerase	CDS_ID OB3119 xylose isomerase	xylose isomerase (EC 5.3.1.5)	Xylose isomerase	2SCG11.03c, xylA, xylose isomerase, len: 387 aa; identical to SW:XYLA_STRRU (EMBL:M73789) Streptomyces rubiginosus xylose isomerase XylA, 387 aa. Contains Pfam match to entry PF00259 Xylose_isom, Xylose isomerase and matches to Prosite entries PS00172 Xylose isomerase signature 1 and PS00173 Xylose isomerase signature 2 xylose isomerase	similar to Escherichia coli K12 D-xylose isomerase gi: 1789988 (441 aa). BLAST with identity of 99% in 440 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Xylose isomerase	Xylose isomerase	identified by match to protein family HMM PF00259 xylose isomerase	
ECOLI03438	D-xylose-binding periplasmic protein	ABC transporter, substrate binding protein	putative xylose binding periplasmic protein of ABC transport system	D-xylose-binding periplasmic protein	similar to GB:X03656, GB:X03438, GB:M17706, SP:P09919, PID:1330309, PID:1330310, PID:183041, PID:183045, PID:296647, PID:31690, and PID:732764; identified by sequence similarity; putative D-xylose ABC transporter, periplasmic D-xylose-binding protein	D-xylose-binding periplasmic protein	Product confidence : putative Gene name confidence : hypothetical putative sugar uptake ABC transporter periplasmic solute-binding protein precursor	D-xylose ABC transporter, periplasmic-D xylose binding protein	D-xylose ABC transporter (substrate-binding protein)	D-XYLOSE-BINDING PERIPLASMIC PROTEIN	Xylose binding protein transport system	xylose binding protein transport system, xylF	Residues 1 to 330 of 330 are 99 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli K12 ref: NP_418023.1 xylose binding protein transport system	Sugar-binding periplasmic protein	Probable d-xylose-binding periplasmic abc transporter protein	identified by similarity to SP:P37387; match to protein family HMM PF00532 xylose ABC transporter, periplasmic xylose-binding protein	D-xylose ABC transporter, substrate-binding protein	InterProMatches:IPR001761; ribose transport putative ribose ABC transporter (ribose-binding protein)	similar to BRA1150, D-xylose ABC transporter, periplasmic D-xylose-binding protein XylF, D-xylose ABC transporter, periplasmic D-xylose-binding protein	ABC transporter, periplasmic xylose binding protein	Periplasmic binding protein/LacI transcriptional regulator	ATP/GTP-binding site motif A (P-loop):Periplasmic binding protein/LacI transcriptional regulator:Twin-arginine translocation ...	Code: G; COG: COG4213 xylose binding protein transport system	putative xylose ABC transporter periplasmic component	Periplasmic binding protein/LacI transcriptional regulator	putative solute-binding component of ABC transporter similarity:fasta; with=UniProt:Q926F3_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative sugar uptake ABC transporter periplasmic solute-binding protein.; length=345; id 86.705; 346 aa overlap; query 1-346; subject 1-345	D-xylose ABC transporter, substrate-binding protein precursor	ABC sugar transporter, periplasmic binding protein	D-xylose ABC transporter, substrate-binding protein TIGRFAM: D-xylose ABC transporter, substrate-binding protein: (8.3e-198) PFAM: periplasmic binding protein/LacI transcriptional regulator: (0.0017) KEGG: sil:SPO0861 xylose ABC transporter, periplasmic xylose-binding protein, ev=1e-156, 81% identity	
ECOLI03439	Xylose import ATP-binding protein xylG	putative D-xylose transport ATP-binding protein xylG	Xylose import ATP-binding protein xylG	identified by match to TIGR protein family HMM TIGR01193 D-xylose ABC transporter, ATP-binding protein	Xylose import ATP-binding protein xylG	Xylose import ATP-binding protein xylG	D-xylose ABC transporter (ATP binding protein)	Xylose import ATP-binding protein xylG	Xylose import ATP-binding protein xylG	Residues 1 to 513 of 513 are 99 pct identical to residues 1 to 513 of a 513 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290152.1 putative ATP-binding protein of xylose transport system	Xylose import ATP-binding protein xylG	Xylose import ATP-binding protein xylG	similar to BRA1151, D-xylose ABC transporter, ATP-binding protein XylG, D-xylose ABC transporter, ATP-binding protein	Xylose import ATP-binding protein xylG	identified by match to protein family HMM PF00005 D-xylose ABC transporter, ATP-binding protein	ABC transporter	ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase	Code: G; COG: COG1129 putative ATP-binding protein of xylose transport system	ABC transporter-like	Xylose import ATP-binding protein xylG	Xylose import ATP-binding protein xylG	Sugar transport ATP-binding protein	Xylose import ATP-binding protein xylG	D-xylose ABC transporter, ATPase subunit KEGG: bte:BTH_I2340 sugar ABC transporter, ATP-binding protein TIGRFAM: D-xylose ABC transporter, ATPase subunit PFAM: ABC transporter related SMART: AAA ATPase	D-xylose ABC transporter, ATP-binding protein	Sugar transport ATP-binding protein	D-xylose ABC transporter, ATPase subunit KEGG: bcn:Bcen_6503 D-xylose ABC transporter, ATP-binding protein TIGRFAM: D-xylose ABC transporter, ATPase subunit PFAM: ABC transporter related SMART: AAA ATPase	Xylose import ATP-binding protein xylG	sugar ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM TIGR02633	
ECOLI03440	Xylose transport system permease protein xylH	ABC transporter, membrane spanning protein	putative inner membrane permease of D-xyloseABC transporter	Xylose transport system permease protein xylH	similar to GB:L17326, and PID:306325; identified by sequence similarity; putative D-xylose ABC transporter, permease protein	Xylose transport system permease	Product confidence : putative Gene name confidence : hypothetical putative sugar uptake ABC transporter permease protein	D-xylose ABC transporter, permease protein	D-xylose ABC transporter (permease)	XYLOSE TRANSPORT SYSTEM PERMEASE PROTEIN XYLH	Xylose transport system permease protein xylH	Residues 1 to 393 of 393 are 100 pct identical to residues 1 to 393 of a 393 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290153.1 putative xylose transport, membrane component	Sugar transport system permease protein	Probable xylose transmembrane abc transporter protein	Xylose ABC transporter	similar to BRA1152, D-xylose ABC transporter, permease protein XylH, D-xylose ABC transporter, permease protein	ABC xylose transporter, fused permease domains	identified by match to protein family HMM PF02653 D-xylose ABC transporter, permease protein	inner-membrane translocator	Bacterial inner-membrane translocator	Code: G; COG: COG4214 putative xylose transport, membrane component	inner-membrane translocator	putative transmembrane component of ABC transporter similarity:fasta; with=UniProt:Q92UD5_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative sugar uptake ABC transporter permease protein.; length=453; id 76.402; 428 aa overlap; query 14-437; subject 26-453	inner-membrane translocator	Inner-membrane translocator	xylose ABC transporter, permease protein similar to xylH (Atu3575) [Agrobacterium tumefaciens str. C58] and SMb20903 [Sinorhizobiummeliloti] Similar to swissprot:Q8UA00 Putative location:bacterial inner membrane Psort-Score: 0.5628; go_component: membrane [goid 0016020]; go_component: extrachromosomal DNA [goid 0046821]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810]	Xylose transport system permease protein XylH	Sugar transport system permease protein	Putative xylose transport system permease protein xylH	
ECOLI03441	Xylose operon regulatory protein	Transcriptional regulator	Xylose operon regulatory protein	Transcriptional regulator	conserved hypothetical protein	Xylose operon regulatory protein	Xylose operon regulatory protein	Xylose operon regluatory protein	Xylose operon regulatory protein	similar to Escherichia coli K12 putative regulator of xyl operon gi: 1789993 (393 aa). BLAST with identity of 99% in 393 aa. This CDS contains an in-frame stop codon.  The sequence has been checked and is believed to be correct. pseudo	Putative AraC-family transcriptional regulatory protein	Xylose operon regulatory protein	IPR000005: Helix-turn-helix, AraC type; IPR001761: Periplasmic binding protein/LacI transcriptional regulator xylose operon regulatory protein (AraC/XylS family)	similar to Salmonella typhi CT18 xylose operon regulatory protein xylose operon regulatory protein	Putative AraC-family transcriptional regulatory protein	Similar to: HI1106, XYLR_HAEIN Xylose operon regulatory protein	Transcriptional regulators PurR protein	Xylose operon regulatory protein	identified by match to protein family HMM PF00165 xylose operon regluatory protein	Helix-turn-helix, AraC type:Periplasmic binding protein/LacI transcriptional regulator	Code: K; COG: COG1609 putative regulator of xyl operon	Transcriptional Regulator, AraC family	Code: K; COG: COG1609 putative regulator of xyl operon	Transcriptional regulator, AraC family	Xylose operon regulatory protein	Putative AraC-family transcriptional regulatory protein	Transcriptional regulator, AraC family	Putative regulator of xyl operon	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type KEGG: bte:BTH_I2337 xylose operon regluatory protein	
ECOLI03442	Protein bax	Putative exported amidase	Hypothetical bax protein	BAX protein	Bax protein, putative	PUTATIVE PERIPLASMIC PROTEIN	Putative Bax protein	Putative ATP-binding protein	Putative Bax protein	Residues 1 to 274 of 274 are 99 pct identical to residues 1 to 274 of a 274 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290155.1 putative ATP-binding protein	BAX protein	IPR002901: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase gene transcribed divergently from malS	similar to Salmonella typhi CT18 putative exported amidase putative exported amidase	Predicted peptidoglycan hydrolase, FlgJ family	Gene transcribed divergently from malS	identified by similarity to SP:P27297; match to protein family HMM PF01832 putative bax protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function ; putative Bax protein	Code: R; COG: COG2992 putative ATP-binding protein	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	uncharacterized FlgJ-related protein COG2992	Code: R; COG: COG2992 putative ATP-binding protein	BAX protein	Bax protein, putative precursor	bax protein, putative	Uncharacterized FlgJ-related protein-like	Mannosyl-glycoprotein endo-beta-N- acetylglucosamidase precursor	Mannosyl-glycoprotein endo-beta-N- acetylglucosamidase precursor	Putative ATP-binding protein	Uncharacterized FlgJ-related protein	
ECOLI03443	Alpha-amylase	Alpha-amylase	Alpha-amylase	Alpha-amylase	Residues 1 to 676 of 676 are 98 pct identical to residues 1 to 676 of a 676 aa protein from Escherichia coli O157:H7 ref: NP_312481.1 alpha-amylase	Alpha-amylase protein	similar to Salmonella typhi CT18 alpha-amylase alpha-amylase	Alpha-amylase protein	alpha-amylase	Glycosidases AmyA protein	Alpha-amylase	Code: G; COG: COG0366 alpha-amylase	Glycosidase COG0366	Alpha-amylase	Alpha-amylase protein precursor	alpha-amylase G-6 precursor	Alpha-amylase	Alpha-amylase protein precursor	Alpha-amylase protein precursor	Alpha-amylase	Alpha-amylase	Alpha amylase	alpha-amylase Code: G; COG: COG0366	Alpha-amylase protein precursor	periplasmic alpha-amylase precursor MalS	Glycoside hydrolase family 13, candidate alpha- glycosidase	Alpha amylase, catalytic region precursor	Alpha amylase, catalytic region precursor	Periplasmic alpha-amylase	
ECOLI03444	Valine--pyruvate aminotransferase	Valine--pyruvate aminotransferase	Valine-pyruva_e aminotransferase	Aminotransferase	Valine--pyruvate aminotransferase	Valine-pyruvate aminotransferase	Putative valine-pyruvate aminotransferase	Valine--pyruvate aminotransferase	Valine-pyruvate aminotransferase	Valine--pyruvate aminotransferase	Valine-pyruvate aminotransferase	Alanine-alpha-ketoisovalerate (Or valine- pyruvate) transaminase, transaminase C	Alanine-alpha-ketoisovalerate aminotransferase	Valine-pyruvate aminotransferase	Residues 36 to 452 of 452 are 99 pct identical to residues 1 to 417 of a 417 aa protein from Escherichia coli K12 ref: NP_418029.1 alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase, transaminase C	Valine--pyruvate aminotransferase	Valine--pyruvate aminotransferase	valine-pyruvate aminotransferase	alanine transaminase	similar to Salmonella typhi CT18 valine--pyruvate aminotransferase valine--pyruvate aminotransferase	Valine--pyruvate aminotransferase	Putative valine--pyruvate aminotransferase	valine--pyruvate aminotransferase	Valine-pyruvate aminotransferase	Best Blastp Hit: gb|AAC25982.1| (AF014804) AvtA [Neisseria meningitidis] >gi|7227076|gb|AAF42158.1| (AE002531) valine--pyruvate aminotransferase [Neisseria meningitidis MC58] COG0436 PLP-dependent aminotransferases putative valine--pyruvate aminotransferase	Evidence 2b : Function of strongly homologous gene; Product type e : enzyme valine-pyruvate aminotransferase	valine-pyruvate transaminase; transaminase C; Code: E; COG: COG3977 alanine-alpha-ketoisovalerate transaminase	Aminotransferase, class I and II	aminotransferase, class I and II	
ECOLI03445	Putative electron transport protein ysaA	Formate hydrogenlyase, iron-sulfur subunit I	Formate dehydrogenase, iron-sulfur subunit	Putative electron-transport protein	Putative electron transport protein ysaA	Electron transport protein	Putative uncharacterized protein yiaI	Residues 3 to 159 of 159 are 98 pct identical to residues 1 to 157 of a 157 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290158.1 orf, conserved hypothetical protein	similar to Salmonella typhi CT18 putative electron-transport protein putative electron-transport protein	Putative oxidoreductase	Code: C; COG: COG1142 conserved hypothetical protein	Code: C; COG: COG1142; orf conserved hypothetical protein	Putative electron transport protein YsaA	Putative electron transport protein YsaA	4Fe-4S ferrodoxin	electron transport protein Also similar to CD3315 (42.94 38d).	conserved hypothetical protein Code: C; COG: COG1142	putative electron transport protein YsaA	4Fe-4S ferredoxin, iron-sulfur binding domain protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein	Putative uncharacterized protein	4Fe-4S binding domain protein	Predicted hydrogenase, 4Fe-4S ferredoxin-type component	4Fe-4S binding domain protein	4Fe-4S ferredoxin iron-sulfur binding domain protein	4Fe-4S binding domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03446	HTH-type transcriptional regulator yiaJ	Uncharacterized HTH-type transcriptional regulator HI1032	Putative uncharacterized protein	Putative transcriptional regulator	Hypothetical transcriptional regulator yiaJ	Residues 1 to 282 of 282 are 99 pct identical to residues 1 to 282 of a 282 aa protein from Escherichia coli K12 ref: NP_418031.1 putative regulator	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Transcriptional regulator IclR protein	IclR family transcriptional repressor	identified by match to protein family HMM PF01614 transcriptional regulator, IclR family	Code: K; COG: COG1414 putative regulator	Transcriptional Regulator, IclR family	Transcriptional Regulator, IclR family	Hypothetical transcriptional regulator YiaJ	Hypothetical transcriptional regulator YiaJ	putative regulator Code: K; COG: COG1414	predicted DNA-binding transcriptional repressor	Transcriptional regulator, IclR family protein	L-ribulose-5-phosphate 4-epimerase	Transcriptional regulator, IclR family	Transcriptional regulator, IclR family	Transcriptional regulator IclR	Predicted DNA-binding transcriptional repressor	Transcriptional regulator, IclR family	Transcriptional regulator, IclR family	Transcriptional regulator, IclR family	Putative uncharacterized protein	Putative uncharacterized protein	Transcriptional regulator, IclR family	
ECOLI03447	2,3-diketo-L-gulonate reductase	2,3-diketo-L-gulonate reductase	2,3-diketo-L-gulonate reductase	2,3-diketo-L-gulonate reductase	Residues 1 to 332 of 332 are 99 pct identical to residues 1 to 332 of a 332 aa protein from Escherichia coli K12 ref: NP_418032.1 putative dehydrogenase	similar to Salmonella typhi CT18 putative carboxylic acid dehydrogenase putative carboxylic acid dehydrogenase	Malate/L-lactate dehydrogenases Hypothetical protein	2,3-diketo-L-gulonate reductase	Code: C; COG: COG2055 putative dehydrogenase	putative L-lactate dehydrogenase family protein similarity:fasta; SWALL:LDH_ALCEU (SWALL:Q07251); Alcaligenes eutrophus; L-lactate dehydrogenase; ldH; length 349 aa; id=33.61; ungapped id=36.64; E()=5e-24; 351 aa overlap; query 1-333 aa; subject 1-340 aa similarity:fasta; SWALL:Q930Q4 (EMBL:AE007208); Rhizobium meliloti; putative; length 334 aa; id=55.42; ungapped id=55.75; E()=3e-61; 332 aa overlap; query 1-331 aa; subject 1-331 aa	2,3-diketo-L-gulonate reductase	2,3-diketo-L-gulonate reductase	Malate dehydrogenase	putative dehydrogenase Code: C; COG: COG2055	2,3-diketo-L-gulonate dehydrogenase, NADH-dependent putative oxidoreductase	Putative uncharacterized protein	2,3-diketo-L-gulonate reductase	Malate/L-lactate dehydrogenase	2,3-diketo-L-gulonate reductase	Malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase	2,3-diketo-L-gulonate dehydrogenase, NADH- dependent	2,3-diketo-L-gulonate reductase	2,3-diketo-L-gulonate reductase	3-dehydro-L-gulonate 2-dehydrogenase	Malate/L-lactate dehydrogenase	Malate/L-lactate dehydrogenase	Putative uncharacterized protein	
ECOLI03448	Protein yiaL	Putative uncharacterized protein	Putative uncharacterized protein STY4129	Hypothetical protein yiaL	Putative uncharacterized protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Similar to Bacteroides thetaiotaomicron conserved hypothetical protein BT0770 SWALL:AAO75877 (EMBL:AE016929) (148 aa) fasta scores: E(): 2.4e-15, 34.01% id in 147 aa, and to Streptococcus pneumoniae hypothetical protein Sp1327 SWALL:Q97Q98 (EMBL:AE007431) (152 aa) fasta scores: E(): 1.3e-09, 28.37% id in 148 aa, and to Yersinia pestis hypothetical protein Y1462 SWALL:Q8D0W9 (EMBL:AE013749) (156 aa) fasta scores: E(): 2.2e-09, 30.66% id in 150 aa conserved hypothetical protein	Uncharacterized BCR EbgC protein	Putative cytoplasmic protein	identified by sequence similarity; putative; ORF located using Blastx; COG2731 conserved hypothetical protein	identified by sequence similarity; putative; ORF located using Blastx conserved hypothetical protein	Code: G; COG: COG2731 putative lipase	Conserved hypothetical protein COG2731 [G] Beta-galactosidase, beta subunit	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yiaL	conserved hypothetical protein 22 PFAM: conserved hypothetical protein 22 KEGG: sfr:Sfri_3560 conserved hypothetical protein 22	conserved hypothetical protein 22 PFAM: conserved hypothetical protein 22 KEGG: son:SO4189 hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein KEGG: sdn:Sden_0479 conserved hypothetical protein 22	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03449	2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Probable DctQ	hypothetical C4-dicarboxylate transport system, small permease component	Hypothetical protein yiaM	TRAP transporter, DctQ subunit	Product confidence : putative Gene name confidence : hypothetical putative ABC transporter integral membrane protein	transporter	identified by match to protein family HMM PF04290 TRAP dicarboxylate transporter, DctQ subunit	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Uncharacterized BCR Hypothetical protein	Putative transporter	Citation: Behrendt M.C. , Forward J.A. , Kelly D.J.  , Cross R. , Wyborn N.R. J. Bacteriol. 179: 5482- 5493 (1997). COG3090: TRAP-type C4-dicarboxylate transport system small permease component (DctM). PF04290: DctQ. TRAP-T family transporter, small (4TMs) inner membrane subunit	Code: G; COG: COG3090 conserved hypothetical protein	Tripartite ATP-independent periplasmic transporter, DctQ component	probable C4-dicarboxylate transport system, permease protein Similar to SMb20034 [Sinorhizobium meliloti] and dctQ (VP0911) [Vibrio parahaemolyticus RIMD 2210633] Similar to swissprot:Q92XC5 Putative location:bacterial inner membrane Psort-Score: 0.2508; go_component: extrachromosomal DNA [goid 0046821]	Putative transporter	Tripartite ATP-independent periplasmic transporter, DctQ component precursor	Putative uncharacterized protein yiaM	Tripartite ATP-independent periplasmic transporter, DctQ component PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component KEGG: bur:Bcep18194_C7435 tripartite ATP-independent periplasmic transporter, DctQ component	Hypothetical protein	Tripartite ATP-independent periplasmic transporter, DctQ component PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component KEGG: msu:MS0052 hypothetical protein	Tripartite ATP-independent periplasmic transporter, DctQ component PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component KEGG: wsu:WS1864 small integral C4-dicarboxylate membrane transport protein,putative	Tripartite ATP-independent periplasmic transporter, DctQ component precursor	Tripartite ATP-independent periplasmic transporter, DctQ component precursor	Tripartite ATP-independent periplasmic transporter, DctQ component PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component KEGG: rsp:RSP_3663 TRAP-T family transporter, small (4TMs) inner membrane subunit	conserved hypothetical protein Code: G; COG: COG3090	
ECOLI03450	2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN	Putative TRAP transporter large permease protein HI1029	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Hypothetical protein yiaN	Putative ABC transport system, membrane protein	Putative ABC transport system, membrane protein	transporter	Residues 1 to 424 of 430 are 90 pct identical to residues 1 to 424 of a 425 aa protein from Salmonella typhimurium LT2 ref: NP_462572.1 putative DedA family, membrane protein	identified by match to protein family HMM PF00597; match to protein family HMM PF06808; match to protein family HMM TIGR00786 TRAP dicarboxylate transporter, DctM subunit	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Integral membrane protein, possible transporter Hypothetical protein	Putative DedA family, membrane protein	COG1593: TRAP-type C4-dicarboxylate transport system large permease component (DctQ). TIGR00786. PF00597. TRAP-T family transporter, large (12TMs) inner membrane subunit	probable C4-dicarboxylate transport system, permease protein Similar to SMb20035 [Sinorhizobium meliloti] Similar to swissprot:Q92XC4 Putative location:bacterial inner membrane Psort-Score: 0.6137; go_component: membrane [goid 0016020]; go_component: integral to membrane [goid 0016021]; go_component: extrachromosomal DNA [goid 0046821]; go_function: molecular_function unknown [goid 0005554]	Putative DedA family, membrane protein YiaN	Putative uncharacterized protein yiaN	Integral membrane protein, DedA family	TRAP dicarboxylate transporter, DctM subunit TIGRFAM: TRAP dicarboxylate transporter, DctM subunit PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit KEGG: pol:Bpro_4500 TRAP dicarboxylate transporter-DctM subunit	TRAP dicarboxylate transporter, DctM subunit TIGRFAM: TRAP dicarboxylate transporter, DctM subunit PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit KEGG: gka:GK1972 transporter	TRAP dicarboxylate transporter, DctM subunit precursor	TRAP dicarboxylate transporter, DctM subunit TIGRFAM: TRAP dicarboxylate transporter, DctM subunit PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit KEGG: rsp:RSP_3662 TRAP-T family transporter, large (12TMs) inner membrane subunit	putative membrane protein Code: G; COG: COG1593	TRAP dicarboxylate transporter, DctM subunit TIGRFAM: TRAP dicarboxylate transporter, DctM subunit PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit KEGG: oih:OB3255 C4-dicarboxylate transport system permease large protein	Probable ABC transporter integral membrane protein	putative DedA family, membrane protein YiaN-like	Putative uncharacterized protein	TRAP dicarboxylate transporter, DctM subunit precursor	
ECOLI03451	2,3-diketo-L-gulonate-binding periplasmic protein yiaO	Putative uncharacterized protein	Putative ABC transporter Periplasmic binding protein yiaO	unknown protein	identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787 TRAP dicarboxylate transporter, DctP subunit	similar to Salmonella typhimurium putative dicarboxylate-binding periplasmic protein putative dicarboxylate-binding periplasmic protein	Putative dicarboxylate-binding periplasmic protein	identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787 TRAP transporter solute receptor, DctP family	C4-dicarboxylate transport system, periplasmic component	TRAP dicarboxylate transporter, DctP subunit TIGRFAM: TRAP dicarboxylate transporter, DctP subunit: (9e-51) PFAM: TRAP dicarboxylate transporter- DctP subunit: (3.4e-69) KEGG: mag:amb1225 TRAP-type C4-dicarboxylate transport system, ev=4e-52, 36% identity	Putative bacterial extracellular solute-binding protein YiaO	Putative ABC transporter periplasmic binding protein yiaO	TRAP dicarboxylate transporter, DctP subunit	Possible C4-dicarboxylate transport system, periplasmic component	TRAP dicarboxylate transporter, DctP subunit TIGRFAM: TRAP dicarboxylate transporter, DctP subunit PFAM: TRAP dicarboxylate transporter- DctP subunit KEGG: hso:HS_0762 possible C4-dicarboxylate transport system, periplasmic component	TRAP transporter, DctP family, putative	Putative TRAP-dicarboxylate transporter, periplasmic component	putative solute-binding transport protein Code: G; COG: COG1638	TRAP dicarboxylate transporter, DctP subunit TIGRFAM: TRAP dicarboxylate transporter, DctP subunit PFAM: TRAP dicarboxylate transporter- DctP subunit KEGG: gka:GK1971 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein)	TRAP dicarboxylate transporter, DctP subunit TIGRFAM: TRAP dicarboxylate transporter, DctP subunit PFAM: TRAP dicarboxylate transporter- DctP subunit KEGG: sme:SMb21438 putative C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide	Putative TRAP-dicarboxylate transporter, periplasmic component	Putative ABC transporter periplasmic solute- bindingprotein	putative bacterial extracellular solute-binding protein YiaO	Putative uncharacterized protein	TRAP dicarboxylate transporter, DctP subunit precursor	TRAP dicarboxylate transporter DctP subunit	TRAP transporter solute receptor, DctP family	Predicted transporter	TRAP transporter solute receptor, DctP family	
ECOLI03452	L-xylulose/3-keto-L-gulonate kinase	Probable L-xylulose kinase	Putative L-xylulose kinase	Cryptic L-xylulose kinase	Putative L-xylulose kinase	L-xylulose kinase protein	similar to Salmonella typhi CT18 putative L-xylulose kinase putative L-xylulose kinase	Putative L-xylulose kinase	Cryptic L-xylulose kinase	putative L-xylulose kinase similarity:fasta; SWALL:LYXK_ECOLI (SWALL:P37677); Escherichia coli; cryptic L-xylulose kinase; lyX; length 498 aa; id=32.93; ungapped id=34.65; E()=1e-47; 504 aa overlap; query 5-499 aa; subject 6-493 aa similarity:fasta; SWALL:Q92W66 (EMBL:AL591985); Rhizobium meliloti; putative L-xylulose kinase protein; lyX; length 509 aa; id=40.07; ungapped id=41.14; E()=3.9e-64; 504 aa overlap; query 4-502 aa; subject 5-500 aa	Cryptic L-xylulose kinase	Putative L-xylulose kinase	Cryptic L-xylulose kinase	L-xylulose kinase	L-xylulose kinase	Carbohydrate kinase, FGGY family, putative	L-xylulose kinase, cryptic Code: G; COG: COG1070	L-xylulose kinase	L-xylulose kinase	L-xylulose kinase	Putative L-xylulose kinase	Carbohydrate kinase FGGY	Cryptic L-xylulose kinase	Carbohydrate kinase FGGY	Carbohydrate kinase FGGY	L-xylulose kinase	Cryptic L-xylulose kinase	Cryptic L-xylulose kinase	Carbohydrate kinase FGGY	
ECOLI03453	3-keto-L-gulonate-6-phosphate decarboxylase sgbH	Putative hexulose-6-phosphate synthase	Probable hexulose-6-phosphate synthase	IPR001754: Orotidine 5'-phosphate decarboxylase putative 3-hexulose-6-phosphate isomerase	similar to Salmonella typhi Ty2 putative hexulose-6-phosphate synthase putative hexulose-6-phosphate synthase	3-hexulose-6-phosphate synthase and related proteins SgbH protein	Putative 3-hexulose-6-phosphate isomerase	Probable hexulose-6-phosphate synthase	Probable hexulose-6-phosphate synthase	3-hexulose-6-phosphate synthase	Orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase	probable 3-hexulose 6-phosphate synthase Code: G; COG: COG0269	3-keto-L-gulonate 6-phosphate decarboxylase 3-hexulose-6-phosphate synthase	Transketolase	3-keto-L-gulonate-6-phosphate decarboxylase SgbH	3-dehydro-L-gulonate-6-phosphate decarboxylase	3-dehydro-L-gulonate-6-phosphate decarboxylase	3-keto-L-gulonate 6-phosphate decarboxylase	3-keto-L-gulonate-6-phosphate decarboxylase SgbH	3-dehydro-L-gulonate-6-phosphate decarboxylase	3-keto-L-gulonate-6-phosphate decarboxylase SgbH	3-dehydro-L-gulonate-6-phosphate decarboxylase	Putative uncharacterized protein	Putative uncharacterized protein	Putative hexulose-6-phosphate synthase	3-keto-L-gulonate-6-phosphate decarboxylase SgbH	3-keto-L-gulonate-6-phosphate decarboxylase SgbH	3-keto-l-gulonate-6-phosphate decarboxylase sgbh	
ECOLI03454	Putative L-ribulose-5-phosphate 3-epimerase sgbU	Putative hexulose-6-phosphate isomerase	Hexulose-6-phosphate isomerase SgbU, putative	Putative uncharacterized protein	Putative L-xylulose-5-phosphate 3-epimerase	Putative sugar-phosphate isomerase	putative hexulose-6-phosphate isomerase SgbU	Putative hexulose-6-phosphate isomerase	Hexulose-6-phosphate isomerase SgbU, putative	CDS_ID OB3419 hypothetical protein	HEXULOSE-6-PHOSPHATE ISOMERASE	Putative L-xylulose-5-phosphate 3-epimerase	Putative hexulose-6-phosphate isomerase	IPR004560: Putative hexulose-6-phosphate isomerase putative 3-hexulose-6-phosphate isomerase	similar to Salmonella typhi Ty2 putative sugar-phosphate isomerase putative sugar-phosphate isomerase	Putative 3-hexulose-6-phosphate isomerase	Putative L-xylulose-5-phosphate 3-epimerase SgaU protein	Putative 3-hexulose-6-phosphate isomerase	putative hexulose-6-phosphate isomerase (HUMPI)	Xylose isomerase-like TIM barrel	Putative hexulose-6-phosphate isomerase	Putative hexulose-6-phosphate isomerase	Putative hexulose-6-phosphate isomerase	Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel KEGG: oih:OB3419 hypothetical protein	Hexulose-6-phosphate isomerase	Hexulose-6-phosphate isomerase	probable 3-hexulose-6-phosphate isomerase Code: G; COG: COG3623	Hexulose-6-phosphate isomerase	putative hexulose-6-phosphate isomerase	
ECOLI03455	L-ribulose-5-phosphate 4-epimerase sgbE	Putative sugar isomerase	Probable sugar isomerase sgbE	similar to Salmonella typhi Ty2 putative sugar isomerase putative sugar isomerase	L-ribulose-5-phosphate 4-epimerase	Probable L-ribulose-5-phosphate 4-epimerase	class II aldolase/adducin-like protein PFAM: class II aldolase/adducin-like KEGG: pca:Pcar_3030 L-fuculose phosphate aldolase	Probable sugar isomerase SgbE	putative epimerase/aldolase Code: G; COG: COG0235	L-ribulose-5-phosphate 4-epimerase sgbE	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase sgbE	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase sgbE	Putative uncharacterized protein	Putative uncharacterized protein	Putative sugar isomerase	L-ribulose-5-phosphate 4-epimerase sgbE	L-ribulose-5-phosphate 4-epimerase sgbE	L-ribulose-5-phosphate 4-epimerase	Putative sugar isomerase	L-ribulose-5-phosphate 4-epimerase sgbE	L-ribulose-5-phosphate 4-epimerase sgbE	L-ribulose-5-phosphate 4-epimerase sgbE	Putative sugar isomerase	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase	
ECOLI03458	Putative outer membrane protein yiaT	Putative outer membrane protein OmpV	Putative outer membrane protein yiaT	MltA-interacting MipA precursor	MltA-interacting MipA family protein precursor	MltA-interacting MipA precursor	putative outer membrane protein Code: M; COG: COG3713	MltA-interacting MipA family protein precursor	MltA-interacting protein MipA	MltA-interacting MipA family protein precursor	Outer membrane protein OmpV	Predicted protein	MltA-interacting protein MipA	MltA-interacting MipA family protein precursor	MltA-interacting protein MipA	MltA-interacting MipA family protein precursor	Putative uncharacterized protein	MltA-interacting protein MipA	Putative uncharacterized protein	Putative uncharacterized protein yiaT	Putative uncharacterized protein yiaT	Putative uncharacterized protein yiaT	YiaT protein	Predicted protein	Predicted protein	conserved predicted protein	MltA-interacting MipA family protein	
ECOLI03460	Inner membrane protein yiaV	Putative uncharacterized protein VCA0047	Putative uncharacterized protein VPA1480	Putative membrane protein	Multidrug resistance efflux pump	fusaric acid resistance protein fusE	identified by match to protein family HMM PF00529 conserved hypothetical protein	Secretion protein HlyD	putative membrane protein Code: V; COG: COG1566	Putative secretion protein HlyD	Membrane fusion protein (MFP) (TC 8.A.1) family	Membrane fusion protein (MFP) component of efflux pump, signal anchor	Membrane fusion protein (MFP) (TC 8.A.1) family	Secretion protein HlyD family protein	Membrane fusion protein (MFP) (TC 8.A.1) family	Putative uncharacterized protein	Secretion protein HlyD family protein precursor	Putative uncharacterized protein	Fusaric acid resistance protein FusE	Auxiliary transport protein, membrane fusion protein (MFP) family	Secretion protein, HlyD family	Putative uncharacterized protein	Membrane fusion protein (MFP) component of efflux pump, signal anchor	Membrane fusion protein (MFP) component of efflux pump, signal anchor	Putative multidrug resistance efflux pump	Membrane fusion protein (MFP) component of efflux pump, signal anchor	YiaV protein	Membrane fusion protein (MFP) component of efflux pump, signal anchor	
ECOLI03459	Uncharacterized HTH-type transcriptional regulator yiaU	putative LysR-family transcriptional regulator similarity:fasta; SWALL:CAE27003 (EMBL:BX572597); Rhodopseudomonas palustris; transcriptional regulator,lysr family; rpa1562; length 324 aa; 295 aa overlap; query 3-295 aa; subject 2-296 aa similarity:fasta; SWALL:CAE28828 (EMBL:BX572603); Rhodopseudomonas palustris; transcriptional regulator,lysr family; rpa3387; length 338 aa; 288 aa overlap; query 9-295 aa; subject 34-321 aa	transcriptional regulator, LysR family	transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	YiaU protein	Predicted DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	predicted DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	
ECOLI03461	Inner membrane protein yiaW	Inner membrane protein yiaW	hypothetical protein	hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Conserved inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	GTPase	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein yiaW	Putative uncharacterized protein yiaW	Putative uncharacterized protein	Putative uncharacterized protein yiaW	YiaW protein	Conserved inner membrane protein	Conserved inner membrane protein	conserved predicted inner membrane protein	Conserved inner membrane protein	

ECOLI03462	Aldehyde dehydrogenase B	Chloroacetaldehyde dehydrogenase	Putative aldehyde dehydrogenase	Aldehyde dehydrogenase B	NAD-dependent aldehyde dehydrogenase	Aldehyde dehydrogenase	Aldehyde dehydrogenase	Aldehyde dehydrogenase B	Acetaldehyde dehydrogenase	putative aldehyde dehydrogenase	Aldehyde dehydrogenase B	identified by match to TIGR protein family HMM TIGR01236 aldehyde dehydrogenase family protein	Aldehyde dehydrogenase	Aldehyde dehydrogenase	Aldehyde dehydrogenase	Aldehyde dehydrogenase B	Product confidence : probable Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE ALDEHYDE DEHYDROGENASE PROTEIN	Aldehyde dehydrogenase family protein	Aldehyde dehydrogenase	aldehyde dehydrogenase	Putative aldehyde dehydrogenase	Aldehyde dehydrogenase family protein	ALDEHYDE DEHYDROGENASE	Aldehyde dehydrogenase	Aldehyde dehydrogenase B	CDS_ID OB2534 aldehyde dehydrogenase	similar to AX065091-1|CAC25785.1| percent identity: 93 in 506 aa putative aldehyde dehydrogenase	aldehyde dehydrogenase	Aldehyde dehydrogenase	
ECOLI03463	Probable alcohol dehydrogenase	Alcohol dehydrogenase 4 [Source:GeneDB_Spombe;Acc:SPAC5H10.06c]	Iron-containing alcohol dehydrogenase	Alcohol dehydrogenase	Alcohol dehydrogenase, class IV	pseudo	putative alcohol dehydrogenase	Probable alcohol dehydrogenase	Alcohol dehydrogenase II	Alcohol dehydrogenase II	Alcohol dehydrogenase	Putative oxidoreductase	Putative alcohol dehydrogenase	Alcohol dehydrogenase, class IV	Residues 1 to 383 of 383 are 98 pct identical to residues 1 to 383 of a 383 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290169.1 putative oxidoreductase	Similar to putative oxidoreductase YiaY of Escherichia coli	Probable alcohol dehydrogenase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative alcohol dehydrogenase	COG1454 alcohol dehydrogenase II	alcohol dehydrogenase II	Alcohol dehydrogenase IV EutG protein	Alcohol dehydrogenase II	identified by similarity to SP:P06758; match to protein family HMM PF00465 alcohol dehydrogenase II	identified by similarity to SP:P06758; match to protein family HMM PF00465 alcohol dehydrogenase II	Iron-containing alcohol dehydrogenase	identified by similarity to PIR:A25978; match to protein family HMM PF00465 putative lactaldehyde reductase	Code: C; COG: COG1454 putative oxidoreductase	Iron-containing alcohol dehydrogenase	iron-containing alcohol dehydrogenase	
ECOLI03464	Selenocysteine-specific elongation factor	Selenocysteine-specific elongation factor	Selenocysteine-specific elongation factor	SelB	Selenocysteine-specific elongation factor	Selenocysteine-specific elongation factor	Probable selenocysteine-specific elongation factor	Selenocysteine-specific elongation factor	Selenocysteine-specific elongation factor	Selenocysteine-specific translation elongation factor	Selenocysteine-specific translation elongation factor	glimmer prediction SelB selenocysteine-specific elongation factor	Selenocysteine-specific translation elongation factor	Selenocysteinyl-tRNA-specific translation factor	Selenocysteine-specific translation elongation factor	Residues 1 to 614 of 614 are 99 pct identical to residues 1 to 614 of a 614 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290170.1 selenocysteinyl-tRNA-specific translation factor	Selenocysteine-specific elongation factor	IPR000795: Elongation factor, GTP-binding; IPR004161: Elongation factor Tu, domain 2; IPR004535: Translation elongation factor, selenocysteine-specific selenocysteinyl-tRNA-specific translation factor	similar to Salmonella typhi CT18 selenocysteine-specific elongation factor selenocysteine-specific elongation factor	Selenocysteine-specific elongation factor EF	SelB translation factor; Similar to: HI0709, SELB_HAEIN selenocysteine-specific elongation factor	Selenocysteine-specific translation elongation factor SelB protein	Selenocysteine-specific translation elongation factor	Selenocysteinyl-tRNA-specific translation factor	SelB translation factor selenocysteine-specific elongation factor	Translation elongation factor, selenocysteine-specific	Code: J; COG: COG3276 selenocysteinyl-tRNA-specific translation factor	identified by similarity to SP:P14081; match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475 selenocysteine-specific translation elongation factor	Selenocysteine-specific translation elongation factor	
ECOLI03465	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(SeC) selenium transferase	Hypothetical L-seryl-tRNA(ser) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	glimmer prediction SelA selenocysteine synthase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA selenium transferase	L-seryl-tRNA(Sec) selenium transferase	Residues 1 to 463 of 463 are 99 pct identical to residues 1 to 463 of a 463 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290171.1 selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	L-seryl-tRNA(Sec) selenium transferase	identified by similarity to SP:Q9S3K3; match to protein family HMM PF03841; match to protein family HMM TIGR00474 L-seryl-tRNA selenium transferase	Putative uncharacterized protein	IPR004534: L-seryl-tRNA selenium transferase selenocysteine synthase (with SelD)	similar to Salmonella typhi CT18 L-seryl-tRNA(Ser) selenium transferase L-seryl-tRNA(Ser) selenium transferase	
ECOLI03466	Uncharacterized GST-like protein yibF	UreX	Glutathione transferase	Glutathione S-transferase related protein	Putative glutathione transferase	Putative glutathione S-transferase-related protein	Hypothetical GST-like protein yibF	Putative uncharacterized protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL ZINC FINGER DOMAIN C2H2 TYPE PROTEIN	Putative uncharacterized protein	Glutathione S-transferase	Putative S-transferase	hypothetical protein	Glutathione-S-transferase	Residues 1 to 202 of 202 are 99 pct identical to residues 1 to 202 of a 202 aa protein from Escherichia coli K12 ref: NP_418049.1 putative S-transferase	Putative glutathione S-transferase protein	Probable glutathione s-transferase protein	identified by match to protein family HMM PF02798 glutathione S-transferase family protein	Probable glutathione S-transferase	Glutathione S-transferase protein	IPR004045: Glutathione S-transferase, N-terminal; IPR004046: Glutathione S-transferase, C-terminal putative glutathione S-transferase	similar to Salmonella typhi CT18 putative glutathione transferase putative glutathione transferase	Glutathione-S-transferases Gst protein	Glutathione S-transferase family protein	Putative glutathione S-transferase	putative glutathione S-transferase	Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal	Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal	
ECOLI03467	Protein rhsA	Cell wall-associated protein	RhsA element core protein RshA	
ECOLI03468	Protein yibA	PBS lyase HEAT-like repeat protein	Putative uncharacterized protein	Lyase containing HEAT-repeat	PBS lyase HEAT-like repeat protein	PBS lyase HEAT domain protein repeat-containing protein	Putative uncharacterized protein	Putative uncharacterized protein	YibA protein	Lyase containing HEAT-repeat protein	lyase containing HEAT-repeat	Lyase containing HEAT-repeat protein	
ECOLI03469	Putative uncharacterized protein yibJ	IPR001826: RHS protein orf, hypothetical protein	Putative RHS domain protein	Predicted Rhs-family protein	Rhs family protein	RHS protein	Putative truncated Rhs core protein	Putative uncharacterized protein	Putative uncharacterized protein	YibJ protein	jgi|Capca1|50467|gw1.15978.2.1	Predicted Rhs-family protein	pseudo Rhs core protein with extension, C-terminal fragment	
ECOLI03470	Uncharacterized protein yibG	Hypothetical protein yibG precursor	conserved hypothetical protein	Conserved protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein yibG	Putative uncharacterized protein yibG	Putative uncharacterized protein	YibG protein	Conserved protein	Conserved protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI03475	Inner membrane protein yibH	Inner membrane protein yibH	Residues 1 to 361 of 361 are 95 pct identical to residues 1 to 378 of a 378 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290177.1 putative membrane protein	identified by similarity to GB:BAC48748.1 multidrug resistance efflux pump, putative	Code: V; COG: COG1566 putative membrane protein	Code: V; COG: COG1566 putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein yibH	secretion protein HlyD family protein PFAM: secretion protein HlyD family protein KEGG: rsp:RSP_1965 putative membrane fusion protein family member	putative membrane protein Code: V; COG: COG1566	conserved hypothetical protein	Secretion protein HlyD family protein	Membrane fusion protein (MFP) (TC 8.A.1) family	Secretion protein HlyD family protein	Predicted protein	Membrane fusion protein (MFP) (TC 8.A.1) family	Secretion protein HlyD family protein	Auxiliary transport protein, membrane fusion protein family	Putative uncharacterized protein	Auxiliary transport protein, membrane fusion protein family	Auxiliary transport protein, membrane fusion protein (MFP) family	Auxiliary transport protein, membrane fusion protein (MFP) family	Secretion protein HlyD family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yibH	Putative uncharacterized protein yibH	Putative uncharacterized protein yibH	Putative uncharacterized protein yibH	
ECOLI03476	Uncharacterized protein yibI	Hypothetical protein yibI	Putative uncharacterized protein yibI	Residues 1 to 120 of 120 are 99 pct identical to residues 1 to 120 of a 120 aa protein from Escherichia coli K12 ref: NP_418055.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yibI	inner membrane protein YiaW	conserved hypothetical protein	conserved hypothetical protein putative inner membrane protein	Putative uncharacterized protein	KEGG: slo:Shew_0889 hypothetical protein conserved hypothetical protein	KEGG: slo:Shew_0889 hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yibI	Putative uncharacterized protein	Putative uncharacterized protein yibI	Putative uncharacterized protein yibI	Putative uncharacterized protein yibI	
ECOLI03477	PTS system mannitol-specific EIICBA component	PTS system, mannitol-specfic IIBC components	PTS system mannitol-specific EIICBA component	PTS system, mannitol-specific IIABC component	Mannitol-specific enzyme II of phosphotransferase system	Lmo2799 protein	putative mannitol-specific IIABC component, PTS system	PTS system, mannitol-specific IIABC component	PTS system mannitol-specific EIICB component	PTS system mannitol-specific EIICBA component	PTS system, mannitol-specific IIabc component	PTS system mannitol-specific EIICBA component	PTS system, mannitol-permease II, BC component	PTS system mannitol-specific EIICB component	PTS system, mannitol-specific IIABC component	PTS system, mannitol-specific enzyme IIABC components	CDS_ID OB2603 PTS system mannitol-specific enzyme II BC component	PTS system mannitol-specific EIICB component	PTS system, mannitol-specific IIBC component	PTS system mannitol-specific EIICB component	PTS system mannitol-specific EIICBA component	Phosphotransferase system, mannitol-specific IIBC component	Mannitol/fructose-specific phosphotransferase system, IIA domain	Lin2931 protein	Residues 1 to 637 of 637 are 99 pct identical to residues 1 to 637 of a 637 aa protein from Escherichia coli O157:H7 ref: NP_312502.1 mannitol-specific PTS system enzyme IIABC components	PTS system, mannitol-specific IIABC component	PTS system mannitol-specific EIICB component	Mannitol PTS, EIICB	PTS system, mannitol-specific IIBC component	
ECOLI03478	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	putative mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	mannitol-1-phosphate dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	CDS_ID OB2600 mannitol-1-phosphate dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Residues 62 to 443 of 443 are 99 pct identical to residues 1 to 382 of a 382 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290180.1 mannitol-1-phosphate dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	mannitol-phosphate 5-dehyrogenase	Mannitol-1-phosphate 5-dehydrogenase	Mannitol-1-phosphate 5-dehydrogenase	
ECOLI03479	Mannitol operon repressor	Mannitol operon repressor	Mannitol operon repressor	putative mannitol operon repressor	Mannitol operon repressor	Mannitol operon repressor	Mannitol operon repressor	Mannitol operon repressor	Repressor for mtl	Mannitol operon repressor	Residues 1 to 195 of 195 are 99 pct identical to residues 1 to 195 of a 195 aa protein from Escherichia coli K12 ref: NP_418058.1 repressor for mtl	Mannitol operon repressor	IPR007761: Mannitol repressor repressor for mtl	Mannitol operon repressor	Hypothetical protein	Repressor for mtl	Code: K; COG: COG3722 repressor for mtl	Code: K; COG: COG3722 repressor for mtl	mannitol operon repressor	Mannitol operon repressor	Mannitol operon repressor	Mannitol operon repressor	Mannitol operon repressor	Mannitol operon repressor	mannitol operon repressor identified by similarity to SP:P36563; match to protein family HMM PF05068	Mannitol operon repressor	Mannitol operon repressor	repressor for mtl Code: K; COG: COG3722	Mannitol operon repressor	
ECOLI03480	Uncharacterized protein yibT	Uncharacterized protein yibT	Uncharacterized protein yibT	putative cytoplasmic protein	similar to Salmonella typhi CT18 hypothetical protein hypothetical protein	Uncharacterized protein yibT	putative cytoplasmic protein	putative cytoplasmic protein	Uncharacterized protein yibT	Uncharacterized protein yibT	putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03481	Uncharacterized protein yibL	Putative uncharacterized protein STY4107	Hypothetical protein yibL	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein yibL	Putative uncharacterized protein	Residues 1 to 120 of 120 are 98 pct identical to residues 1 to 120 of a 120 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290182.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative cytoplasmic protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein yibL	Hypothetical protein	conserved hypothetical protein KEGG: shm:Shewmr7_2509 hypothetical protein	Hypothetical protein	conserved hypothetical protein KEGG: son:SO2832 hypothetical protein	conserved hypothetical protein	conserved hypothetical protein KEGG: she:Shewmr4_2439 hypothetical protein	
ECOLI03482	L-lactate permease	L-lactate permease	L-lactate permease	L-lactate permease	Residues 10 to 560 of 560 are 99 pct identical to residues 1 to 551 of a 551 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290186.1 L-lactate permease	IPR003804: L-lactate permease LctP transporter, L-lactate permease	similar to Salmonella typhi CT18 L-lactate permease L-lactate permease	L-lactate permease lctP homolog	Ortholog of S. aureus MRSA252 (BX571856) SAR2455 putative L-lactate permease 2	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter L-lactate permease	L-lactate permease	Similar to Escherichia coli L-lactate permease LldP SW:LLDP_ECOLI (P33231) (551 aa) fasta scores: E(): 6.2e-49, 45.1% id in 541 aa, and to Bacillus subtilis L-lactate permease LctP TR:O31470 (EMBL:Z99105) (541 aa) fasta scores: E(): 1.4e-95, 50.73% id in 542 aa. Similar to SAR0113, 65.977% identity (66.352% ungapped) in 532 aa overlap putative L-lactate permease 2	Code: C; COG: COG1620 L-lactate permease	Code: C; COG: COG1620 L-lactate permease	L-lactate permease	Code: C; COG: COG1620 L-lactate permease	L-lactate permease	L-lactate permease	L-lactate permease	L-lactate permease Code: C; COG: COG1620	L-lactate permease	L-lactate transport	L-lactate permease	Putative uncharacterized protein	L-lactate permease	Putative L-lactate permease	L-lactate permease	L-lactate permease	L-lactate transport	
ECOLI03483	Putative L-lactate dehydrogenase operon regulatory protein	Putative L-lactate dehydrogenase operon regulator	Putative transcriptional regulator	Putative L-lactate dehydrogenase operon Regulatory protein	Transcriptional regulator	Residues 6 to 263 of 263 are 100 pct identical to residues 1 to 258 of a 258 aa protein from Escherichia coli K12 ref: NP_418061.1 transcriptional regulator	IPR000524: Bacterial regulatory protein, GntR family putative transcriptional regulator for lct operon (GntR family)	similar to Salmonella typhi Ty2 putative L-lactate dehydrogenase operon regulator putative L-lactate dehydrogenase operon regulator	Evidence 2b : Function of strongly homologous gene; Product type r : regulator transcriptional repressor for L-lactate utilization (GntR family)	Similar to Rhizobium loti transcriptional regulator MLL6865 SWALL:Q987X6 (EMBL:AP003010) (250 aa) fasta scores: E(): 4.6e-09, 22.83% id in 219 aa, and to Escherichia coli, and Shigella flexneri putative L-lactate dehydrogenase operon regulatory protein LldR or LctR or B3604 or SF3643 or S4125 SWALL:LLDR_ECOLI (SWALL:P33233) (258 aa) fasta scores: E(): 1.6e-06, 27.11% id in 236 aa putative GntR-family regulatory protein	Putative transcriptional GntR family regulator for lct operon	Code: K; COG: COG2186 transcriptional regulator	Code: K; COG: COG2186 transcriptional regulator	Code: K; COG: COG2186 transcriptional regulator	Putative L-lactate dehydrogenase operon regulatory protein	Putative L-lactate dehydrogenase operon Regulatory protein	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: pol:Bpro_0417 transcriptional regulator, GntR family	Transcriptional regulator-like protein protein	L-lactate utilization transcriptional repressor	transcriptional regulator Code: K; COG: COG2186	DNA-binding transcriptional repressor	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Putative transcriptional repressor for L-lactate utilization	Putative uncharacterized protein	Putative L-lactate dehydrogenase operon regulatory protein LldR	Probable transcriptional regulator	GntR domain protein	Putative L-lactate dehydrogenase operon regulator	
ECOLI03484	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	Residues 1 to 396 of 396 are 100 pct identical to residues 1 to 396 of a 396 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290188.1 L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase (FMN-dependent) related enzyme	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark L-lactate dehydrogenase	IPR000262: FMN-dependent alpha-hydroxy acid dehydrogenase; IPR003009: FMN/related compound-binding core; IPR008259: FMN-dependent alpha-hydroxy acid dehydrogenase, active site L-lactate dehydrogenase	similar to Salmonella typhi Ty2 putative L-lactate dehydrogenase putative L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme L-lactate dehydrogenase, FMN linked	Similar to: HI1739.1, LLDD_HAEIN L-lactate dehydrogenase	L-lactate dehydrogenase	Similar to Q9KKW6 L-lactate dehydrogenase from Vibrio cholerae (378 aa). FASTA: opt: 927 Z-score: 1134.7 E(): 2.6e-55 Smith-Waterman score: 999; 43.005 identity in 386 aa overlap. Contains a frameshift after aa 179 pseudo L-lactate dehydrogenase, pseudogene	L-lactate dehydrogenase	L-lactate dehydrogenase	L-lactate dehydrogenase	FMN-dependent alpha-hydroxy acid dehydrogenase	Code: C; COG: COG1304 L-lactate dehydrogenase	
ECOLI03485	Uncharacterized tRNA/rRNA methyltransferase yibK	23S rRNA methyltransferase	RNA methyltransferase, TrmH family, group 2, putative	TRNA/rRNA methylase	Uncharacterized tRNA/rRNA methyltransferase slr0992	tRNA/rRNA methyltransferase	Uncharacterized tRNA/rRNA methyltransferase MG346	Uncharacterized tRNA/rRNA methyltransferase MG346 homolog	Probable tRNA/rRNA methyltransferase HI0766	identified by match to PFAM protein family HMM PF00588 spoU rRNA methylase family protein	Probable RNA methyltransferase	Putative tRNA/rRNA methyltransferase	Putative tRNA/rRNA methyltransferase	Putative uncharacterized protein CPE1311	RNA methyltransferase, TrmH family	SpoU rRNA methylase family protein	RNA methyltransferase, TrmH family	Putative uncharacterized protein	Probable rRNA methylase	Putative RNA methylase	Predicted rRNA methylase	RNA methyltransferase, putative	RRNA methylase	RNA methyltransferase, putative	tRNA/rRNA methyltransferase	Putative RNA methyltransferase	Alr3352 protein	RNA methyltransferase, TrmH family, group 2	Probable rRNA methylase homolog	
ECOLI03486	Serine acetyltransferase	Putative serine acetyltransferase [Source:GeneDB_Spombe;Acc:SPAC1039.08]	Serine acetyltransferase	Serine acetyltransferase	Serine acetyltransferase	Serine acetyltransferase	Serine acetyltransferase	Serine acetyltransferase	CysE	Serine acetyltransferase	Serine acetyltransferase	Serine acetyltransferase	putative serine acetyltransferase	Serine acetyltransferase	serine acetyltransferase	identified by match to PFAM protein family HMM PF00132 serine acetyltransferase	Serine acetyltransferase	Serine acetyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE SERINE ACETYLTRANSFERASE PROTEIN	Serine acetyltransferase	Serine acetyltransferase	SERINE ACETYLTRANSFERASE	Serine acetyltransferase	Serine acetyltransferase	CDS_ID OB0098 serine O-acetyltransferase	serine acetyltransferase	Serine acetyltransferase	Serine acetyltransferase	Serine O-acetyltransferase	
ECOLI03487	Glycerol-3-phosphate dehydrogenase	glycerol-3-phosphate dehydrogenase;	Glycerol-3-phosphate dehydrogenase	similar to sp|Q00055 Saccharomyces cerevisiae YDL022w GPD1 glycerol-3-phosphate dehydrogenase (NAD ), cytoplasmic, start by similarity	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase	
ECOLI03488	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	putative protein-transport protein SecB	Protein-export protein secB	similar to GB:L14787, GB:L14788, SP:P98168, SP:P98169, PID:292931, and PID:292933; identified by sequence similarity; putative protein-export protein SecB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PROTEIN-EXPORT	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	Protein-export protein secB	
ECOLI03489	Glutaredoxin-3	Glutaredoxin	Glutaredoxin-1 [Source:GeneDB_Spombe;Acc:SPAC4F10.20]	Glutaredoxin	DEHA2D03410p;some similarities with uniprot|P25373 Saccharomyces cerevisiae YCL035C GRX1 Hydroperoxide and superoxide- radical responsive heat-stable glutathione-dependent disulfide oxidoreductase;	Glutaredoxin	Glutaredoxin	Probable glutaredoxin	Glutaredoxin 3	Glutaredoxin-1	Glutaredoxin	Glutaredoxin	Glutaredoxin	Glutaredoxin	Glutaredoxin	Glutaredoxin 3	Glutaredoxin	Glutaredoxin 3	Glutaredoxin family protein	Glutaredoxin	Glutaredoxin-3	similar to SP:P37687; identified by sequence similarity; putative glutaredoxin 3	Glutaredoxin-1	Glutaredoxin 3	Glutaredoxin 3	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLUTAREDOXIN 3 PROTEIN	Glutaredoxin	Glutaredoxin 3	glutaredoxin	
ECOLI03490	Uncharacterized protein yibN	Putative uncharacterized protein	Uncharacterized protein HI0744	Putative uncharacterized protein CPE1585	Rhodanese family protein	Putative uncharacterized protein	Putative uncharacterized protein	Rhodanese-related sulfurtransferase	Putative secreted protein	Putative exported protein	conserved hypothetical protein	Hypothetical protein yibN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Rhodanese domain protein	Putative rhodanese-related sulfurtransferases	Uncharacterized protein BUsg_049	Rhodanese-like domain protein	Putative uncharacterized protein	Rhodanese-like domain protein	Putative uncharacterized protein VP2830	Uncharacterized protein yibN	Rhodanese-related sulfurtransferase	Uncharacterized protein BU052	Rhodanese-related sulfurtransferase	Residues 5 to 147 of 147 are 99 pct identical to residues 1 to 143 of a 143 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290194.1 orf, conserved hypothetical protein	Putative membrane protein	Putative transmembrane protein	
ECOLI03491	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	PHOSPHOGLYCERATE MUTASE;10_1060, PHOSPHOGLYCERATE MUTASE, PMGI_ANTSP, gene found by Glimmer;	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	putative phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	identified by match to protein family HMM PF01676; match to protein family HMM TIGR01307 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	
ECOLI03492	Uncharacterized protein yibP	M23/M37 peptidase domain protein	Putative peptidase	Peptidase, M23/M37 family	Putative uncharacterized protein	Membrane-bound metallopeptidase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Peptidase, M23/M37 family	Related to lipoprotein NlpD/LppB	Lmo2504 protein	Putative peptidase	Cell wall endopeptidase, family M23/M37	Cell wall endopeptidase, family M23/M37	putative NlpD-related protein family M37 unassigned peptidase (NlpD protein)	Peptidase, M23/M37 family	Hypothetical protein yibP	identified by match to protein family HMM PF01551 peptidase, M23/M37 family	Peptidase, M23/M37 family	Peptidase, M23/M37 family	Putative exported peptidase	Cell wall-binding protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL SIGNAL PEPTIDE PROTEIN	Putative uncharacterized protein	Peptidase, M23/M37 family, putative	hypothetical protein	hypothetical conserved protein	
ECOLI03494	Uncharacterized glycosyltransferase yibD	Putative glycosyl transferase	Related to glycosyltransferase involved capsular polysaccharide biosynthesis	Beta-1,3-N-acetylglucosaminyltransferase	Beta-1,3-N-acetylglucosaminyltransferase	Glycosyl transferase	Putative glycosyl transferase yibD	glucosyltransferase protein	Putative glycosyltransferase	Putative regulator	Capsular polysaccharide biosynthesis protein	Putative uncharacterized protein	Similar to glycosyltransferase	Beta-D-1,6 glucosyl transferase	putative capsular polysaccharide biosynthesis protein,Glycosyl Transferase Family 2, YveT	EpsV putative polysaccharide biosynthesis protein	IPR001173: Glycosyl transferase, family 2 putative glycosyltransferase	similar to Salmonella typhi Ty2 putative glycosyl transferase putative glycosyl transferase	Putative uncharacterized protein	Putative glycosyltransferase	Glycosyltransferase COG0463 [M] Glycosyltransferases involved in cell wall biogenesis	Code: M; COG: COG0463 putative regulator	Putative glycosyl transferase YibD	Glycosyl transferase, group 2 family protein	Putative glycosyl transferase YibD	Glycosyltransferase related enzyme	lipooligosaccharide biosynthesis glycosyltransferase identified by match to protein family HMM PF00535	putative regulator Code: M; COG: COG0463	
ECOLI03493	Uncharacterized protein yibQ	Uncharacterized protein HI0755	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Hypothetical Exported Protein	Putative uncharacterized protein	hypothetical protein	Hypothetical protein yibQ	identified by match to protein family HMM PF04748 conserved hypothetical protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein yibQ	hypothetical protein	Residues 43 to 319 of 319 are 99 pct identical to residues 1 to 277 of a 277 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290197.1 yibQ gene product	Similar to unknown protein YibQ of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	HYPOTHETICAL 30.7 KD PROTEIN IN SECB-TDH INTERGENIC REGION	Similar to: HI0755, YIBQ_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Putative uncharacterized protein	similar to polysaccharide deacetylase Conserved protein	Putative periplasmic protein	identified by similarity to OMNI:SO0046; match to protein family HMM PF04748 conserved hypothetical protein	conserved hypothetical protein; possible divergent polysaccharide deacetylase	Protein of unknown function DUF610	Code: S; COG: COG2861 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function ; putative signal peptide	
ECOLI03495	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	putative threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE THREONINE 3-DEHYDROGENASE PROTEIN	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	threonine dehydrogenase	L-threonine 3-dehydrogenase	SC1A2.08, tdh, threonine 3-dehydrogenase (EC 1.1.1.103), len: 342 aa. Highly similar to many dehydrogenases involved in L-threonine catabolism e.g.  Escherichia coli SW:TDH_ECOLI(EMBL:X06690) threonine 3-dehydrogenase (EC 1.1.1.103) (341 aa), fasta scores opt: 1464 z-score: 1579.9 E(): 0 60.5% identity in 342 aa overlap. Contains a Prosite hit to PS00059 Zinc-containing alcohol dehydrogenases signature and a Pfam match to entry PF00107 adh_zinc, Zinc-binding dehydrogenases. threonine 3-dehydrogenase.	L-threonine 3-dehydrogenase	Residues 1 to 341 of 341 are 99 pct identical to residues 1 to 341 of a 341 aa protein from Escherichia coli K12 ref: NP_418073.1 threonine dehydrogenase	L-threonine 3-dehydrogenase	L-threonine 3-dehydrogenase	threonine dehydrogenase	conserved gene threonine(-3-)dehydrogenase	threonine dehydrogenase	
ECOLI03496	2-amino-3-ketobutyrate coenzyme A ligase	2-amino-3-ketobutyrate coenzyme A ligase	Putative 2-amino-3-oxobutyrate:CoA ligase	2-amino-3-ketobutyrate CoA ligase	7-keto-8-aminopelargonate synthetase	Aminotransferase, class II	Probable glycine C-acetyltransferase	2-amino-3-ketobutyrate coenzyme A ligase	Putative 8-amino-7-oxononanoate synthase/2-amino- 3-ketobutyrate coenzyme A ligase 1	2-amino-3-ketobutyrate coenzyme A ligase	Putative 8-amino-7-oxononanoate synthase/2-amino- 3-ketobutyrate coenzyme A ligase 1	8-amino-7-oxononanoate synthase	2-amino-3-ketobutyrate coenzyme A ligase	putative 2-amino-3-ketobutyrate coenzyme A ligase	2-amino-3-ketobutyrate coenzyme A ligase	identified by match to protein family HMM PF00155; match to protein family HMM TIGR01825 8-amino-7-oxononanoate synthase, putative	2-amino-3-ketobutyrate coenzyme A ligase	2-amino-3-ketobutyrate coenzyme A ligase	Putative 8-amino-7-oxononanoate synthase/2-amino- 3-ketobutyrate coenzyme A ligase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE 2-AMINO-3-KETOBUTYRATE COENZYME A LIGASE (GLYCINE ACETYLTRANSFERASE) PROTEIN	2-amino-3-ketobutyrate CoA ligase	2-amino-3-ketobutyrate coenzyme A ligase	Aminotransferase, putative 2-amino-3-ketobutyrate coenzyme A ligase	8-amino-7-oxononanoate synthase	2-amino-3-ketobutyrate coenzyme A ligase	Putative 8-amino-7-oxononanoate synthase/2-amino- 3-ketobutyrate coenzyme A ligase	CDS_ID OB3054 glycine C-acetyltransferase	Probable 2-amino-3-ketobutyrate coenzyme A ligase	2-amino-3-ketobutyrate CoA ligase	
ECOLI03497	Protein htrL	Residues 1 to 285 of 285 are 98 pct identical to residues 6 to 290 of a 290 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290201.1 involved in lipopolysaccharide biosynthesis	HtrL involved in lipopolysaccharide biosynthesis	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Lipopolysaccharide biosynthesis protein	Putative uncharacterized protein htrL	Putative uncharacterized protein htrL	Putative uncharacterized protein htrL	Predicted protein	Predicted protein	Putative uncharacterized protein	conserved predicted protein	
ECOLI03498	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-mannoheptose-6-epimerase	ADP-L-glycero-D-mannoheptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-glyceromanno-heptose 6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	UDP-galactose 4-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	UDP-N-acetylglucosamine 4-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	putative ADP glyceromanno-heptose 6-epimerase GmhD	ADP-L-glycero-D-mannoheptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	GLYCERO-MANNOHEPTOSE-EPIMERASE	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	ADP-L-glycero-D-manno-heptose-6-epimerase	Putative ADP-D-beta-heptose epimerase, hldD	ADP-L-glycero-D-mannoheptose-6-epimerase	
ECOLI03499	ADP-heptose--LPS heptosyltransferase 2	ADP-heptose--LPS heptosyltransferase II, putative	ADP-heptose--LPS heptosyltransferase 2	Heptosyltransferase	ADP-heptose--LPS heptosyltransferase II	RfaF	Heptosyltransferase II	Heptosyltransferase II	ADP-heptose:LPS heptosyltransferase	ADP-heptose-LPS heptosyltransferase II	Putative ADP-heptose--LPS heptosyltransferase II	ADP-heptose--LPS heptosyltransferase II	ADP-heptose--LPS heptosyltransferase II	ADP-heptose--LPS heptosyltransferase II	ADP-heptose--LPS heptosyltransferase II	ADP-HEPTOSE-LPS HEPTOSYLTRANSFERASE II (RFAF) ,	ADP-heptose-lps heptosyltransferase II	ADP-heptose--LPS heptosyltransferase II	ADP-heptose-LPS heptosyltransferase II	ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis	ADP-heptose-LPS heptosyltransferase	ADP-heptose--LPS heptosyltransferase II	Putative ADP-heptose--LPS heptosyltransferase II	ADP-heptose--LPS heptosyltransferase II WaaF	Residues 1 to 348 of 348 are 99 pct identical to residues 1 to 348 of a 348 aa protein from Escherichia coli K12 ref: NP_418077.1 ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis	ADP-heptose--LPS heptosyltransferase II	Probable adp-heptose--lipopolysaccharide heptosyltransferase II protein	ADP-heptose--LPS heptosyltransferase II	ADP-heptose--LPS heptosyltransferase II	
ECOLI03500	Lipopolysaccharide heptosyltransferase 1	Heptosyltransferase I	Putative uncharacterized protein	Heptosyltransferase I	Lipopolysaccharide heptosyltransferase-1	Lipopolysaccharide heptosyltransferase-1	Lipopolysaccharide heptosyltransferase-1	Probable heptosyltransferase	Probable heptosyltransferase	Lipopolysaccharide heptosyltransferase-1	Lipopolysaccharide heptosyltransferase	Probable heptosyltransferase	Heptosyltransferase I	Heptosyl transferase I; lipopolysaccharide core biosynthesis	unknown protein	Putative lipopolysaccharide-heptosyl-transferase	Residues 1 to 330 of 330 are 98 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290204.1 heptosyl transferase I; lipopolysaccharide core biosynthesis	Lipopolysaccharide heptosyltransferase-1	Probable lipopolysaccharide heptosyltransferase protein	Lipopolysaccharide heptosyltransferase-1	Lipopolysaccharide heptosyltransferase I	Lipopolysaccharide heptosyltransferase I	IPR000669: Mannitol dehydrogenase heptosyl transferase I	similar to Salmonella typhi Ty2 lipopolysaccharide heptosyltransferase-1 lipopolysaccharide heptosyltransferase-1	Lipopolysaccharide heptosyltransferase-1	Lipopolysaccharide heptosyltransferase I	ADP-heptoseLPS heptosyltransferase RfaF protein	Heptosyltransferase I	Lipopolysaccharide heptosyltransferase 1	
ECOLI03501	O-antigen ligase	Possible transmembrane protein	Probable O-antigen ligase; lipopolysaccharide core biosynthesis	lipid A-core, surface polymer ligase	lipid A-core surface polymer ligase	lipid A-core:surface polymer ligase WaaL	Lipid A-core:surface polymer ligase WaaL	Putative lipid A-core surface polymer ligase	O-antigen polymerase PFAM: O-antigen polymerase KEGG: rso:RSc2204 probable transmembrane protein	O-antigen polymerase PFAM: O-antigen polymerase KEGG: neu:NE1682 possible transmembrane protein	lipid A-core, surface polymer ligase	O-antigen polymerase	O-antigen polymerase	O-antigen ligase	O-antigen polymerase	O-antigen polymerase	O-antigen polymerase	Putative uncharacterized protein	O-antigen polymerase	Lipid A core, surface polymer ligase WaaL	Lipid A-core surface O-antigen ligase	Lipid A-core surface O-antigen ligase	Lipid A-core surface O-antigen ligase	Ybl152 protein	O-antigen ligase	Lipid A-core, surface polymer ligase	
ECOLI03502	Lipopolysaccharide 1,2-N- acetylglucosaminetransferase	Putative uncharacterized protein	ADP-heptoseLPS heptosyltransferase RfaF protein	lipooligosaccharide D-glycero-D-manno-heptosyltransferase	putative heptosyl transferase	Putative D-glycero-D-manno-heptosyl transferase	Putative glycosyl transferase	Putative glycosyl transferase	Lipopolysaccharide core biosynthesis	Putative D-glycero-D-manno-heptosyltransferase	Putative D-glycero-D-manno-heptosyl transferase	Putative heptosyl transferase	Lipooligosaccharide D-glycero-D-manno- heptosyltransferase	Lipopolysaccharide core biosynthesis	Possible heptosyltransferase II	Glycosyl transferase family 9	RfaF protein identified by Glimmer3; putative	glycosyl transferase family 9 PFAM: glycosyl transferase family 9; KEGG: hdu:HD1720 lipooligosaccharide D-glycero-D- manno-heptosyltransferase	
ECOLI03503	Lipopolysaccharide core biosynthesis protein rfaZ	Lipopolysaccharide core biosynthesis domain protein	lipopolysaccharide core biosynthesis	similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein RfaZ lipopolysaccharide core biosynthesis protein RfaZ	Lipopolysaccharide core biosynthesis protein, putative	Lipopolysaccharide core biosynthesis protein rfaZ	lipopolysaccharide core biosynthesis domain protein	lipopolysaccharide core biosynthesis domain protein	Putative uncharacterized protein	Putative uncharacterized protein	lipopolysaccharide core biosynthesis domain protein KEGG: psb:Psyr_2496 lipopolysaccharide core biosynthesis domain protein	Lipopolysaccharide core biosynthesis domain protein	Lipopolysaccharide core biosynthesis protein	Putative uncharacterized protein	Lipopolysaccharide core biosynthesis protein RfaZ	Lipopolysaccharide core biosynthesis protein RfaZ	Lipopolysaccharide core biosynthesis protein RfaZ	Lipopolysaccharide core biosynthesis protein RfaZ	Lipopolysaccharide core biosynthesis protein RfaZ	Lipopolysaccharide core biosynthesis protein RfaZ	pseudo	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein RfaZ	Lipopolysaccharide core biosynthesis protein	Putative uncharacterized protein	Lipopolysaccharide core biosynthesis protein RfaZ	
ECOLI03504	Lipopolysaccharide core biosynthesis protein rfaY	Lipopolysaccharide core biosynthesis protein rfaY	Putative LPS biosynthesis protein	Residues 1 to 235 of 235 are 100 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli gb: AAC69664.1 WaaY	lipopolysaccharide core biosynthesis; modification of heptose region of the core	similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core heptose(II) kinase rfaY	lipopolysaccharide core biosynthesis	lipopolysaccharide core biosynthesis WaaY	Lipopolysaccharide core biosynthesis protein rfaY	Lipopolysaccharide core biosynthesis protein WaaY	Lipopolysaccharide core biosynthesis protein rfaY	putative LPS biosynthesis protein	lipopolysaccharide core biosynthesis protein RfaY	Putative uncharacterized protein	Lipopolysaccharide core biosynthesis protein RfaY	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein RfaY	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein RfaY	Putative uncharacterized protein	Putative uncharacterized protein	Lipopolysaccharide core biosynthesis protein RfaY	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein RfaY	Lipopolysaccharide core biosynthesis protein RfaY	Lipopolysaccharide core biosynthesis protein RfaY	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein RfaY	
ECOLI03505	Lipopolysaccharide 1,2-glucosyltransferase	Lipopolysaccharide 1,2-glucosyltransferase	Glycosyl transferase, family 8	Putative LPS biosynthesis enzyme	Residues 1 to 337 of 337 are 99 pct identical to residues 1 to 337 of a 337 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290207.1 putative LPS biosynthesis enzyme	potential frameshift to 68 putative glucosyl transferase	IPR000531: TonB-dependent receptor protein UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase	similar to Salmonella typhi Ty2 lipopolysaccharide 1,2-glucosyltransferase lipopolysaccharide 1,2-glucosyltransferase	putative glycosyl transferase, glycosyl transferase family 8 protein	Lipopolysaccharide 1,2-glucosyltransferase	putative glycosyl transferase	identified by match to protein family HMM PF01501 glycosyl transferase, family 8	Code: M; COG: COG1442 UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase	putative general stress protein A similarity:fasta; with=UniProt:GSPA_BACSU (EMBL:BSSACXY); Bacillus subtilis.; gspA; General stress protein A.; length=286; id 24.296; 284 aa overlap; query 33-290; subject 9-278 similarity:fasta; with=UniProt:Q52832_RHILE (EMBL:RLLPCAB); Rhizobium leguminosarum.; lpcA; Galactosyl transferase.; length=309; id 91.558; 308 aa overlap; query 21-328; subject 2-309	galactosyltransferase protein similar to LpcA [Rhizobium leguminosarum] and SMb21068 [Sinorhizobium meliloti] Similar to entrez-protein:CAA64421.1 Putative location:bacterial inner membrane Psort-Score: 0.1150; go_function: transferase activity, transferring hexosyl groups [goid 0016758]; go_process: carbohydrate biosynthesis [goid 0016051]	Glycosyl transferase family 8	lipopolysaccharide 1,2-glucosyltransferase Code: M; COG: COG1442	Lipopolysaccharide biosynthesis glycosyltransferase	putative lipopolysaccharide glycosyltransferase	Putative uncharacterized protein	Lipopolysaccharide 1,2-galactosyltransferase	GspA	UDP-D-glucose:(Galactosyl)lipopolysaccharide glucosyltransferase	Putative uncharacterized protein	Glycosyl transferase, family 8	Lipopolysaccharide 1,2-galactosyltransferase	WbbM protein	Putative glycosyltransferase protein	Glycosyl transferase, family 8	
ECOLI03506	Lipopolysaccharide 1,3-galactosyltransferase	Lipopolysaccharide 1,3-galactosyltransferase	Lipopolysaccharide 1,3-galactosyltransferase	Lipopolysaccharide 1,3-galactosyltransferase	Putative LPS biosynthesis enzyme	Residues 1 to 335 of 335 are 99 pct identical to residues 1 to 335 of a 335 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290209.1 putative LPS biosynthesis enzyme	IPR002495: Glycosyl transferase, family 8 UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase	similar to Salmonella typhi Ty2 lipopolysaccharide 1,3-galactosyltransferase lipopolysaccharide 1,3-galactosyltransferase	Lipopolysaccharide 1,3-galactosyltransferase	Glycosyl transferase, family 8	Code: M; COG: COG1442 UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase	Code: M; COG: COG1442 UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase	Code: M; COG: COG1442 Lipopolysaccharide 1,3-galactosyltransferase	UDP-glucose:(Glucosyl) LPS alpha1,3- glucosyltransferase WaaO	Lipopolysaccharide 1,3-galactosyltransferase	glycosyl transferase, family 8 PFAM: glycosyl transferase, family 8 KEGG: bsu:BG10558 general stress protein A	Lipid A-core, surface polymer ligase Code: M; COG: COG1442	lipopolysaccharide 1,3-galactosyltransferase	Glycosyltransferase family 8	Glycosyl transferase family 8	Putative uncharacterized protein	Putative uncharacterized protein	Lipopolysaccharide 1,3-galactosyltransferase	UDP-D-galactose:(Glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase	Lipopolysaccharide 1,3-galactosyltransferase	Lipopolysaccharide 3-alpha-galactosyltransferase	Lipopolysaccharide 1,3-galactosyltransferase	Putative uncharacterized protein	Lipopolysaccharide 1,3-galactosyltransferase	
ECOLI03507	Lipopolysaccharide 1,6-galactosyltransferase	Uncharacterized glycosyltransferase HI1698	Putative uncharacterized protein	Lipopolysaccharide 1,6-galactosyltransferase	Putative glycosyltransferase	Putative glycosyltranferase	Putative glycosyltranferase	Glycosyl transferase, group 1 family protein	Putative glycosyltranferase	WLAC PROTEIN	CDS_ID OB2927 glycosyltransferase	Lipopolysaccharide N- acetylglucosaminyltransferase	Similar to lipopolysaccharide 1	lipopolysaccharide 1,6-galactosyltransferase	UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase	similar to Salmonella typhi Ty2 lipopolysaccharide 1,6-galactosyltransferase lipopolysaccharide 1,6-galactosyltransferase	Similar to: HI1698, YG98_HAEIN putative UDP-galactose--lipooligosaccharide galactosyltransferase	Lipopolysaccharide 1,6-galactosyltransferase	Glycosyl transferase, group 1	putative glycosyl transferase	putative O-antigen biosynthesis glycosyltranferase	Glycosyl transferase, group 1	Glycosyltransferase COG0438	Glycosyltransferase COG0438 [M] Glycosyltransferase	glycosyl transferase, group 1	Glycosyl transferase, group 1	Glycosyltransferase-like	glycosyl transferase, group 1	Glycosyl transferase, group 1	
ECOLI03508	Lipopolysaccharide core biosynthesis protein rfaS	Putative uncharacterized protein	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein RfaS	
ECOLI03509	Lipopolysaccharide core biosynthesis protein rfaP	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein rfaP	Lipopolysaccharide core biosynthesis protein WaaP	Putative LPS biosynthesis enzyme	Residues 1 to 268 of 268 are 98 pct identical to residues 1 to 268 of a 268 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290210.1 putative LPS biosynthesis enzyme	lipopolysaccharide core biosynthesis; phosphorylation of core heptose	similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein WaaP	Lipopolysaccharide core heptose(I) kinase rfaP	Lipopolysaccharide core biosynthesis protein WaaP	identified by similarity to SP:Q06995; match to protein family HMM PF06293 lipopolysaccharide kinase RfaP	identified by similarity to GB:AAC69677.1; match to protein family HMM PF06293 lipopolysaccharide kinase RfaP	Lipopolysaccharide kinase	lipopolysaccharide core biosynthesis protein	lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS core RfaP	Lipopolysaccharide kinase	putative LPS biosynthesis enzyme	Lipopolysaccharide core biosynthesis protein WaaP	Lipopolysaccharide core kinase	lipopolysaccharide kinase	Lipopolysaccharide core biosynthesis protein rfaP	lipopolysaccharide core biosynthesis protein Lipopolysaccharide core biosynthesis protein rfaP.  Specific function unclear. INVOLVED IN ATTACHMENT OF PHOSPHATE-CONTAINING SUBSTITUENTS TO THE INNER CORE.	Lipopolysaccharide core biosynthesis protein WaaP	lipopolysaccharide kinase WaaP	lipopolysaccharide core biosynthesis; kinase for core heptose of lipopolysaccharide Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme	lipopolysaccharide core biosynthesis protein	lipopolysaccharide core biosynthesis protein RfaP	Lipopolysaccharide kinase	
ECOLI03510	Lipopolysaccharide core biosynthesis protein rfaG	LPS biosynthesis protein, putative	UDP-glucose:(Heptosyl) LPS alpha 1,3- glucosyltransferase WaaG	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein rfaG	Glycosyl transferase, group 1 family protein	Putative transferase	Putative transferase	Lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein WaaG	Putative transferase	Putative glycosyltransferase	Glucosyltransferase I; lipopolysaccharide core biosynthesis	Putative UDP-glucose:(Heptosyl) LPS alpha 1,3- glucosyltransferase	Residues 1 to 374 of 374 are 99 pct identical to residues 1 to 374 of a 374 aa protein from Escherichia coli gb: AAC69667.1 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG	Probable glycosyltransferase	Putative uncharacterized protein	IPR001064: Beta and gamma crystallin glucosyltransferase I	similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis protein WaaG	Glucosyltransferase I	UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase	Lipopolysaccharide biosynthesis protein	identified by match to protein family HMM PF00534 lipopolysaccharide core biosynthesis protein RfaG	identified by similarity to GB:AAD33103.1; match to protein family HMM PF00534 lipopolysaccharide core biosynthesis protein RfaG	Glycosyl transferase, group 1	Code: M; COG: COG0438 LPS alpha1,3-glucosyltransferase	glucosyltransferase	Glucosyltransferase I	
ECOLI03511	Lipopolysaccharide core biosynthesis glycosyltransferase rfaQ	Heptosyltransferase family protein	Saccharide biosynthesis regulatory protein	Putative glycosyltransferase HI0261	ADP-heptose:LPS heptosyltransferase	Lipopolysaccharide core biosynthesis protein	Alr5168 protein	Putative LPS core biosynthesis-related protein	Lipopolysaccharide core biosynthesis glycosyl transferase rfaQ	Heptosyltransferase family protein	PUTATIVE HEPTOSYLTRANSFERASE III WAAQ	Lipopolysaccharide core biosynthesis heptosyltransferase	Putative lipopolysaccharide biosynthesis protein	Putative LPS biosynthesis enzyme	Residues 1 to 352 of 352 are 99 pct identical to residues 1 to 352 of a 352 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290212.1 putative LPS biosynthesis enzyme	Putative lipopolysaccharide core biosynthesis protein	Lipopolysaccharide core biosynthesis glycosyl transferase RfaQ	Lipopolysaccharide glucosyltransferase I	Saccharide biosynthesis regulatory protein	lipopolysaccharide core biosynthesis; modification of heptose region of core	similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein lipopolysaccharide core biosynthesis protein	Putative lipopolysaccharide core biosynthesis protein	ADP-heptose--LPS heptosyltransferase III	Similar to: HI0261, Y261_HAEIN ADP-heptose--lipooligosaccharide heptosyltransferase I	ADP-heptoseLPS heptosyltransferase RfaF protein	Lipopolysaccharide core biosynthesis protein	Glycosyl transferase, family 9	Lipopolysaccharide heptosyltransferase III, putative	Code: M; COG: COG0859 lipopolysaccharide core biosynthesis protein	
ECOLI03512	3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-octulosonic-acid transferase, putative	3-deoxy-D-manno-octulosonic acid transferase	3-deoxy-D-manno-octulosonic acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	similar to GB:X63692, SP:P26358,  and PID:1632819; identified by sequence similarity; putative 3-deoxy-D-manno-2-octulosonic acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-2-octulosonic acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	KdtA	3-deoxy-D-manno-octulosonic-acid (KDO) transferase	3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-octulosonic acid transferase-like protein	3-deoxy-D-manno-octulosonic-acid transferase	Related to 3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	Probable 3-deoxy-D-manno-octulosonic-acid transferase	hypothetical KDO transferase	3-deoxy-D-manno-octulosonic-acid transferase	KdtA protein	3-deoxy-D-manno-octulosonic-acid transferase	identified by match to PFAM protein family HMM PF00534 3-deoxy-D-manno-octulosonic-acid transferase	3-deoxy-D-manno-2-octulosonic acid transferase	3-deoxy-D-manno-octulosonic-acid transferase	
ECOLI03513	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase	
ECOLI03514	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase	
ECOLI03515	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	similar to GB:M20730, SP:P16535, GB:M24197, PID:150494,  and PID:150513; identified by sequence similarity; putative ribosomal protein L33	50S ribosomal protein L33 1	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	putative ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	identified by match to PFAM protein family HMM PF00471 ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	50S ribosomal protein L33	go_component: mitochondrial large ribosomal subunit [goid 0005762]; go_function: structural constituent of ribosome [goid 0003735]; go_process: protein biosynthesis [goid 0006412] hypothetical protein	50S ribosomal protein L33	
ECOLI03516	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	similar to GB:D90041, GB:X17059, GB:S78829, SP:P18440, PID:219414, PID:2245376, PID:2258431,  and PID:34994; identified by sequence similarity; putative ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	Putative ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	putative ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	similar to GP:15075692; identified by sequence similarity; putative ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	50S ribosomal protein L28	
ECOLI03517	DNA repair protein radC	DNA repair protein radC homolog	DNA repair protein radC homolog	DNA repair protein radC homolog	DNA repair protein radC homolog	DNA repair protein radC homolog	DNA repair protein radC homolog	DNA repair protein radC homolog	DNA repair protein radC-like protein	DNA repair protein radC homolog	DNA repair protein radC	Related to DNA repair protein RadC	DNA repair protein radC	Putative DNA repair protein	putative DNA repair protein RadC	DNA repair protein radC	UPF0758 protein SP_1088	similar to GP:15156693, and SP:P25531; identified by sequence similarity; putative DNA repair protein RadC	DNA repair protein RadC	UPF0758 protein BP1235	UPF0758 protein BB3258	DNA repair protein radC homolog	UPF0758 protein ECA0145	Product confidence : probable Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE DNA REPAIR PROTEIN	UPF0758 protein PSPTO_0086	UPF0758 protein BPP1850	UPF0758 protein PG_0894	UPF0758 protein SpyM3_0777/SPs0978	DNA repair protein RadC	
ECOLI03518	Coenzyme A biosynthesis bifunctional protein coaBC	Phosphopantothenate--cysteine ligase	Coenzyme A biosynthesis bifunctional protein coaBC	DNA/pantothenate metabolism flavoprotein	Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase	Pantothenate metabolism flavoprotein	DNA/pantothenate metabolism flavoprotein	DNA/pantothenate metabolism flavoprotein	Pantothenate metabolism flavoprotein	Coenzyme A biosynthesis bifunctional protein coaBC	DNA/pantothenate metabolism flavoprotein	Coenzyme A biosynthesis bifunctional protein CoaBC	Pantothenate metabolism flavoprotein	Coenzyme A biosynthesis bifunctional protein coaBC	Pantothenate metabolism flavoprotein	Pantothenate metabolism flavoprotein	Phosphopantothenoylcysteine synthetase/decarboxylase	Putative uncharacterized protein PH1444	DNA/pantothenate metabolism flavoprotein	Flavoprotein	Pantothenate metabolism flavoprotein	Putative phosphopantothenoylcysteine decarboxylase	Pantothenate metabolism flavoprotein	Putative p-pantothenate cysteine ligase and p- pantothenenoylcysteine decarboxylase	DNA/pantothenate metabolism flavoprotein related protein	Flavoprotein:DNA/pantothenate metabolism flavoprotein	Dfp DNA/pantothenate metabolism flavoprotein	DNA flavoprotein Dfp	hypothetical protein	
ECOLI03519	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	DEOXYURIDINE 5' TRIPHOSPHATE NUCLEOTIDOHYDROLASE;06_0430, DEOXYURIDINE 5' TRIPHOSPHATE NUCLEOTIDOHYDROLASE, DUT_yeast, gene found by Glimmer;	Deoxyuridine 5'-triphosphate nucleotidohydrolase	identified by match to PFAM protein family HMM PF00692 deoxyuridine 5`-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5`-triphosphate nucleotidohydrolase, putative	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Lmo1691 protein	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Deoxyuridine 5'-triphosphate nucleotidohydrolase	
ECOLI03520	HTH-type protein slmA	HTH-type protein slmA	HTH-type protein slmA	HTH-type protein slmA	HTH-type protein slmA	putative transcriptional regulator, TetR family	HTH-type protein slmA	HTH-type protein slmA	Putative TetR-family transcriptional regulator	HTH-type protein slmA	HTH-type protein slmA	pseudo	HTH-type protein slmA	HTH-type protein slmA	HTH-type protein slmA	Residues 1 to 212 of 212 are 99 pct identical to residues 1 to 212 of a 212 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290221.1 putative transcriptional regulator	HTH-type protein slmA	HTH-type protein slmA	IPR001647: Bacterial regulatory protein TetR, HTH motif putative transcriptional regulator (TetR/ArcR family)	similar to Salmonella typhi CT18 putative TetR-family transcriptional regulator putative TetR-family transcriptional regulator	HTH-type protein slmA	Similar to: HI0955, TTK_HAEIN Ttk	Transcriptional regulator AcrR protein	Transcriptional regulator, TetR family	HTH-type protein slmA	identified by match to protein family HMM PF00440 transcriptional regulator, TetR family	TetR family transcription regulator	regulatory protein, TetR	probable transcription regulator protein	
ECOLI03521	Orotate phosphoribosyltransferase	orotate phosphoribosyltransferase 1;	Major orotate phosphoribosyltransferase (OPRTase) isozyme that catalyzes the fifth enzymatic step in de novo biosynthesis of pyrimidines, converting orotate into orotidine-5'-phosphate; minor OPRTase encoded by URA10.  [Source:SGD;Acc:S000004574]	sp|P41923 Yarrowia lipolytica Orotate phosphoribosyltransferase, start by similarity	Orotate phosphoribosyltransferase [Source:GeneDB_Spombe;Acc:SPBC725.15]	gi|3024492|sp|O13474|PYRE_KLULA Kluyveromyces lactis Orotate phosphoribosyltransferase (OPRT) (OPRTase), start by similarity	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	highly similar to uniprot|P13298 Saccharomyces cerevisiae YML106w URA5 orotate phosphoribosyltransferase1 or uniprot|P30402 Saccharomyces cerevisiae YMR271c URA10;	Orotate phosphoribosyltransferase	DEHA2F07348p;similar to uniprot|P13298 Saccharomyces cerevisiae YML106W URA5 Fifth step in pyrimidine biosynthesis pathway;	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	hypothetical uridine 5'-monophosphate synthase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase	

ECOLI03523	UPF0701 protein yicC	Protein yicC	Putative uncharacterized protein	Alpha helix protein	Putative uncharacterized protein	UPF0701 protein HI0467	YicC-like family protein	Putative uncharacterized protein	Putative uncharacterized protein CPE1750	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized stress-induced protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Lmo1828 protein	Putative uncharacterized protein	Protein yicC	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein BB0818	Putative uncharacterized protein	Protein yicC	
ECOLI03524	DNA-damage-inducible protein D	DNA-damage-inducible protein	Residues 1 to 274 of 274 are 97 pct identical to residues 1 to 274 of a 274 aa protein DIND_ECOLI sp: P23840 DNA-damage-inducible protein D	DNA-damage-inducible protein D	Best Blastp Hit: pir||G65165 DNA-damage-inducible protein d - Escherichia coli >gi|290495|gb|AAA61998.1| (L10328) o278 [Escherichia coli] >gi|1790076|gb|AAC76669.1| (AE000441) DNA-damage-inducible protein [Escherichia coli]; DinD putative DNA damage inducible protein	DNA-damage-inducible protein	DNA-damage-inducible protein	DNA-damage-inducible protein d	DNA-damage-inducible protein	DNA-damage-inducible protein D	hypothetical protein	DNA-damage-inducible protein D	DNA-damage-inducible protein	DNA-damage-inducible protein	Putative DNA-damage-inducible protein	DNA-damage-inducible protein D	DNA-damage-inducible protein	DNA-damage-inducible protein	DNA-damage-inducible protein	DNA-damage-inducible protein D	DNA-damage-inducible protein, part of SOS response	DNA-damage-inducible protein D	DinD	Putative uncharacterized protein	DNA-damage-inducible protein D	DNA-damage-inducible protein	DNA-damage-inducible protein	DNA-damage-inducible protein	DNA-damage-inducible protein	
ECOLI03526	DNA ligase B	DNA ligase B	DNA ligase B	DNA ligase B	Residues 1 to 505 of 505 are 98 pct identical to residues 58 to 562 of a 562 aa protein from Escherichia coli O157:H7 ref: NP_312549.1 putative enzyme	DNA ligase B	DNA ligase B	IPR001679: NAD-dependent DNA ligase putative DNA ligase	similar to Salmonella typhimurium putative DNA ligase putative DNA ligase	DNA ligase B	DNA ligase B	DNA ligase B	identified by match to protein family HMM PF01653; match to protein family HMM PF03120 DNA ligase, NAD-dependent, putative	DNA ligase (NAD+)	Code: L; COG: COG0272 putative enzyme	DNA ligase (NAD+)	NAD-dependent DNA ligase	DNA ligase B	Putative DNA ligase precursor	DNA ligase B	DNA ligase precursor	Putative DNA ligase precursor	DNA ligase, NAD-dependent, putative	putative DNA ligase, NAD-dependent Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	putative enzyme Code: L; COG: COG0272	DNA ligase precursor	NAD-dependent DNA ligase LigB	DNA ligase (NAD(+)) precursor	DNA ligase (NAD(+)) precursor	
ECOLI03525	UPF0126 inner membrane protein yicG	UPF0126 membrane protein HI1240	Putative uncharacterized protein	Putative uncharacterized protein	UPF0126 membrane protein Cj0593c	Predicted membrane protein	Putative membrane protein	Membrane protein	Putative membrane protein	hypothetical membrane protein	UPF0126 inner membrane protein yicG	unknown	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Membrane protein, putative	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein VP2201	Putative uncharacterized protein yicG	similar to AE006133-2|AAK03019.1| percent identity: 57 in 221 aa conserved hypothetical protein	BH1709 protein	Predicted membrane protein	Residues 1 to 223 of 223 are 99 pct identical to residues 1 to 223 of a 223 aa protein from Escherichia coli K12 ref: NP_418103.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to putative membrane protein YicG of Escherichia coli	similar to membrane protein hypothetical protein	
ECOLI03527	Guanylate kinase	guanylate kinase;	Guanylate kinase, converts GMP to GDP; required for growth and mannose outer chain elongation of cell wall N- linked glycoproteins. [Source:SGD;Acc:S000002862]	similar to sp|P15454 Saccharomyces cerevisiae YDR454c GUK1 guanylate kinase, start by similarity	Guanylate kinase	Guanylate kinase [Source:GeneDB_Spombe;Acc:SPBC1198.05]	highly similar to sp|P15454 Saccharomyces cerevisiae YDR454c GUK1 guanylate kinase singleton, start by similarity	Guanylate kinase	Guanylate kinase	Guanylate kinase	Guanylate kinase	Guanylate kinase	GUANYLATE KINASE;01_1220, GUANYLATE KINASE, KGUA_yeast, gene found by Glimmer;	Guanylate kinase	Guanylate kinase	Guanylate kinase	highly similar to uniprot|P15454 Saccharomyces cerevisiae YDR454c Guanylate kinase;	DEHA2G07898p;highly similar to uniprot|P15454 Saccharomyces cerevisiae YDR454C GUK1 Guanylate kinase converts GMP to GDP;	similar to GB:M22538, SP:P19404, PID:1311466,  and PID:188852; identified by sequence similarity; putative guanylate kinase	Guanylate kinase	Guanylate kinase	Guanylate kinase	Guanylate kinase	Guanylate kinase	Guanylate kinase	Guanylate kinase	Guanylate kinase	Guanylate kinase	
ECOLI03528	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	putative DNA-directed RNA polymerase, omega subunit	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase omega chain	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	Residues 1 to 91 of 91 are 98 pct identical to residues 1 to 91 of a 91 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290229.1 RNA polymerase, omega subunit	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase subunit omega	
ECOLI03529	Guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase	Guanosine-3',5'-bis(Diphosphate) 3'- pyrophosphohydrolase	GTP pyrophosphokinase	Pentaphosphate guanosine-3'-pyrophosphohydrolase	Pentaphosphate guanosine-3'-pyrophosphohydrolase	Guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase	GTP pyrophosphokinase	GTP pyrophosphokinase	Guanosine-3',5'-bis(Diphosphate) 3'- diphosphatase, (PpGpp)ase	Guanosine-3',5'-bis(Diphosphate) 3'- pyrophosphohydrolase	Guanosine-3`,5`-bis(Diphosphate) 3`- pyrophosphohydrolase	SpoT	Guanosine-3',5'-bis(Diphosphate) 3'- pyrophosphohydrolase	Putative guanosine-3',5'-bis(Diphosphate) 3'- pyrophosphohydrolase	Guanosine-3',5'-bis(Diphosphate) 3'- pyrophosphohydrolase	GTP pyrophosphokinase	Guanosine-3',5'-bis(Diphosphate) 3'- pyrophosphohydrolase	GTP pyrophosphohydrolase/synthetase, RelA/SpoT family	Guanosine-3',5'-bis(Diphosphate) 3'- pyrophosphohydrolase	Probable GTP pyrophosphokinase	GTP pyrophosphokinase	Guanosine-3',5'-bis(Diphosphate) 3'- pyrophosphohydrolase	putative guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase	Guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase	GTP pyrophosphokinase	Guanosine-3',5'-bis(Diphosphate) 3'- pyrophosphohydrolase	GTP pyrophosphokinase	identified by match to TIGR protein family HMM TIGR01682 RelA/SpoT family protein	Guanosine polyphosphate pyrophosphohydrolase/synthetase	
ECOLI03530	tRNA guanosine-2'-O-methyltransferase	tRNA guanosine-2'-O-methyltransferase	Putative tRNA (Guanosine-2'-O-)-methyltransferase	tRNA/rRNA methyltransferase	RRNA methylase	RRNA methylase SpoU	TRNA (Guanosine-2'-O-)-methyltransferase	TRNA (Guanosine-2'-O)-methyltransferase	Putative rRNA methyltransferase	putative tRNA methyltransferase	Putative tRNA/rRNA methyltransferase BB_0052	Putative RNA methylase	TRNA (Guanosine-2'-O-)-methyltransferase	tRNA (Guanosine-2'-O-)-methyltransferase	Putative tRNA (Guanosine-2'-O)-methyltransferase	rRNA methylase	Putative RNA methyltransferase	TRNA methyltransferase	Putative RNA methylase family protein	tRNA guanosine-2'-O-methyltransferase	TRNA/rRNA methyltransferase	rRNA methylase	RRNA methylases	Residues 1 to 229 of 229 are 100 pct identical to residues 1 to 229 of a 229 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290231.1 putative RNA methylase	tRNA (Guanosine-2'-O-)-methyltransferase	probable tRNA/rRNA methyltransferase	RRNA methylase	Putative uncharacterized protein	Possible 23S rRNA methyltransferase tsnR	
ECOLI03531	ATP-dependent DNA helicase recG	ATP-dependent DNA helicase recG	ATP-dependent DNA helicase RecG	ATP-dependent DNA helicase	ATP-dependent DNA helicase recG	ATP-dependent DNA helicase	ATP-dependent DNA helicase recG	ATP-dependent DNA helicase recG	ATP-dependent DNA helicase RecG	ATP-dependent DNA helicase	ATP-dependent DNA helicase	ATP-dependent DNA helicase RecG	ATP-dependent DNA helicase RecG	ATP-dependent DNA helicase RecG	ATP-dependent DNA helicase recG	ATP-dependent DNA helicase RecG	ATP-dependent DNA helicase	RecG-like helicase	DNA helicase RecG	ATP-dependent DNA helicase recG	DNA helicase recG	ATP-dependent DNA helicase	DNA helicase	ATP-dependent DNA helicase RecG	Lmo1811 protein	ATP-dependent DNA helicase recG	ATP-dependent DNA helicase RecG	ATP-dependent DNA helicase recG	ATP-dependent DNA helicase	
ECOLI03532	Sodium/glutamate symport carrier protein	Sodium/glutamate symporter	Glutamate/sodium ion symporter, GltS	Glutamate permease	Putative sodium/glutamate symporter	Sodium/glutamate symport carrier protein	Sodium/glutamate symport carrier protein	Sodium/glutamate symporter	Putative sodium/glutamate symport carrier protein	Putative sodium/glutamate symport carrier protein	Sodium/glutamate symporter	Putative sodium/glutamate symport carrier protein	Glutamate permease	Glutamate transport	CDS_ID OB3170 hypothetical protein	Transporter, putative	Residues 1 to 401 of 401 are 100 pct identical to residues 1 to 401 of a 401 aa protein from Escherichia coli K12 ref: NP_418110.1 glutamate transport	Sodium/glutamate symport carrier protein	Sodium/glutamate symporter	Sodium/glutamate symport carrier protein	identified by match to protein family HMM PF03616; match to protein family HMM TIGR00210 sodium:glutamate symporter	Sodium/glutamate symport carrier protein	Sodium/glutamate symporter	IPR004445: Sodium/glutamate symporter GltS family, glutamate transport protein	similar to Salmonella typhi CT18 glutamate permease glutamate permease	hypothetical protein, similar to sodium/glutamate symporter	Sodium/Glutamate Symporter	Sodium/glutamate symport carrier protein	Sodium/glutamate symport carrier protein	
ECOLI03533	Putative purine permease yicE	Probable transporter	Xanthine/uracil permease family protein	Putative purine permease	Putative purine permease	Putative membrane protein	putative xanthine/uracil permease	Putative purine permease yicE	Xanthine/uracil permease family protein	Putative purine permease	Xanthine/uracil permease family protein	Xanthine/uracil permease family protein	Xanthine/uracil permease family protein	Putative purine permease yicE	Xanthine/uracil permease protein	Residues 4 to 466 of 466 are 100 pct identical to residues 1 to 463 of a 463 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290235.1 putative transport protein	Putative membrane permease	Similar to xanthine/uracil permease family protein YicE of Escherichia coli	IPR006042: Xanthine/uracil permease family putative NCS2 family, purine/xanthine transport protein	similar to Salmonella typhi CT18 putative purine permease putative purine permease	NCS2 family xanthine/uracil:H+ symporter	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transporter	xanthine permease	Similar to Porphyromonas gingivalis W83 xanthine/uracil permease family protein PG2148 SWALL:AAQ67101 (EMBL:AE017179) (445 aa) fasta scores: E(): 2.3e-126, 76.09% id in 435 aa, and to Bacillus subtilis uric acid permease PucJ or BSU32430 SWALL:PUCJ_BACSU (SWALL:O32139) (449 aa) fasta scores: E(): 2.1e-43, 33.57% id in 423 aa, and to Bacillus subtilis xanthine permease PbuX or BSU22060 SWALL:PBUX_BACSU (SWALL:P42086) (438 aa) fasta scores: E(): 4.8e-43, 33.41% id in 428 aa putative xanthine/uracyl permease, membrane protein	Xanthine/uracil permease family protein	Putative NCS2 family purine/xanthine transport protein	Code: F; COG: COG2233 putative transport protein	Code: F; COG: COG2233 putative transport protein	putative Xanthine/uracil permease	
ECOLI03534	Uncharacterized protein yicH	Putative exported protein	hypothetical protein	Hypothetical protein yicH	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein VP0128	Putative uncharacterized protein yicH	Putative uncharacterized protein	Residues 9 to 577 of 577 are 98 pct identical to residues 1 to 569 of a 569 aa protein from Escherichia coli K12 ref: NP_418112.1 orf, conserved hypothetical protein	Possible exported protein	Similar to putative exported protein YicH of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Possible exported protein	hypothetical exported protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical membrane protein YicH	Exported protein precursor	Putative uncharacterized protein yicH	Exported protein precursor	AsmA family identified by match to protein family HMM PF05170	Possible exported protein precursor	Hypothetical protein	conserved hypothetical protein	Exported protein precursor	
ECOLI03535	Alpha-xylosidase	DEHA2B16126p;similar to uniprot|Q9WYE4 Thermotoga maritima TM0308 Alpha-xylosidase;	Alpha-glucosidase	Possible xylosidase or glucosidase	Alpha-xylosidase	Putative glycosyl hydrolase	Putative family 31 glucosidase yicI	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yicI	Putative uncharacterized protein	Alpha-glucosidase	BH1905 protein	Alpha glucosidase/alpha-xylosidase	SCG22.01c, probable hydrolase (fragment), len: >346 aa; similar to N-terminal part of TR:P96793 (EMBL:U89276) Lactobacillus pentosus alpha-xylosidase XylQ, 762 aa; fasta scores: opt: 1174 z-score: 1386.0 E(): 0; 50.0% identity in 346 aa overlap. Contains Pfam match to entry PF01055 Glyco_hydro_31, Glycosyl hydrolases family 31 SCG20A.35c, probable sugar hydrolase (fragment), len: >443 aa; similar to TR:P96793 (EMBL:U89276) Lactobacillus pentosus alpha-xylosidase XylQ, 762 aa; fasta scores: opt: 1319 z-score: 1518.7 E(): 0; 47.1% identity in 437 aa overlap. Contains Pfam match to entry PF01055 Glyco_hydro_31, Glycosyl hydrolases family 31 putative sugar hydrolase	Residues 1 to 772 of 772 are 99 pct identical to residues 1 to 772 of a 772 aa protein from Escherichia coli K12 ref: NP_418113.1 orf, conserved hypothetical protein	Alpha-xylosidase or alpha-glucosidase	InterProMatches:IPR001179, similar to alpha glucosidase putative glycoside hydrolase family 31	alpha-glucosidase	Alpha-glucosidase alpha-glucosidase	putative alpha-xylosidase	Putative alpha-xylosidase	go_component: endoplasmic reticulum [goid 0005783]; go_function: alpha-glucosidase activity [goid 0004558]; go_process: cell wall biosynthesis (sensu Fungi) [goid 0009272] alpha-xylosidase	putative alpha-glucosidase	Code: G; COG: COG1501 conserved hypothetical protein	putative glycoside hydrolase start codon not provided	Putative family 31 glucosidase YicI	alpha-glucosidases, family 31 of glycosyl hydrolases	
ECOLI03536	Inner membrane symporter yicJ	Possible symporter	Sodium:galactoside family symporter	Hypothetical symporter yicJ	Putative permease	IPR001927: Sodium:galactoside symporter putative GPH family transport protein	similar to Salmonella typhi CT18 sodium:galactoside family symporter sodium:galactoside family symporter	Putative GPH family transport protein	Code: G; COG: COG2211 putative permease	Code: G; COG: COG2211 putative permease	sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family identified by match to protein family HMM PF07690; match to protein family HMM TIGR00792	transcript_id=ENSOCUT00000001028	Hypothetical membrane protein YicJ	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Hypothetical symporter YicJ	putative symporter YicJ	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Putative permease	Putative uncharacterized protein	Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Predicted transporter	Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family	Putative uncharacterized protein	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Sugar transporter	
ECOLI03538	Sugar efflux transporter C	Lmo1682 protein	predcited permease, major facilitator superfamily	identified by match to protein family HMM PF00083 major facilitator family transporter	possible multidrug efflux transporter, MFS family COG2814 Arabinose efflux permease [Carbohydrate transport and metabolism]	Complete genome	Sugar efflux transporter C	Predicted sugar efflux system	Sugar efflux transporter C	Sugar efflux transporter precursor	Sugar efflux transporter C	Possible multidrug efflux transporter, MFS family	Sugar efflux transporter C	Putative sugar transport protein	Putative sugar efflux system	Major facilitator family transporter	Putative sugar efflux system	Putative sugar efflux system	Putative transmembrane transport protein	Putative sugar efflux system	SetC protein	Predicted sugar efflux system	predicted sugar efflux system	hypothetical protein	Predicted sugar efflux system	
ECOLI03539	Uncharacterized inner membrane transporter yicL	Uncharacterized transporter AF_1552	Putative uncharacterized protein	Putative integral membrane protein	Putative uncharacterized protein VVA1521	Permease	Putative membrane protein	Putative uncharacterized protein	Hypothetical transport protein yicL	Putative integral membrane protein, possible permease	Putative permease transporter	Membrane protein	Transporter, drug/metabolite exporter family	Predicted permease	BH0725 protein	SC10A9.04c, possible integral membrane protein, len: 324 aa; similar to SW:YWFM_BACSU (EMBL:X73124) Bacillus subtilis hypothetical 31.3 kDa protein in Pta 3' region Ywfm, 296 aa; fasta scores: opt: 267 z-score: 282.4 E(): 2.7e-08; 26.9% identity in 305 aa overlap. Contains 2x Pfam matches to entry PF00892 DUF6, Integral membrane protein DUF6. Also contains possible hydrophobic membrane spanning regions and a 4x degenerate repeat: LRP(R/A) putative integral membrane protein	Permease of the drug/metabolite transporter (DMT) superfamily	Similar to transporter, EamA family	permease, putative	identified by similarity to OMNI:NTL01FN0565; match to protein family HMM PF00892 integral membrane protein	Cellular Component: membrane (GO:0016020) putative membrane protein, transporter	Putative uncharacterized protein TTHA0204	putative permease, integral membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2614 putative membrane protein	conserved hypothetical protein	Similar to Bacteroides thetaiotaomicron conserved hypothetical protein BT3290 SWALL:AAO78396 (EMBL:AE016939) (288 aa) fasta scores: E(): 8.6e-38, 41.29% id in 293 aa, and to Bacteroides thetaiotaomicron putative integral membrane protein BT2248 SWALL:AAO77355 (EMBL:AE016935) (284 aa) fasta scores: E(): 3.8e-29, 34.64% id in 280 aa, and to Clostridium perfringens hypothetical protein CPE0758 SWALL:Q8XMD1 (EMBL:AP003188) (308 aa) fasta scores: E(): 7.7e-22, 33.01% id in 309 aa putative transmembrane protein	Permeases of the drug/metabolite transporter (DMT) superfamily RhaT protein	
ECOLI03540	Lipoprotein 28	Lipoprotein-28	Putative exported protein	Putative exported protein	Lipoprotein-28	pseudo	Lipoprotein 28	Code: P; COG: COG1464 lipoprotein-28	Code: P; COG: COG1464 lipoprotein 28	Lipoprotein YaeC	ABC metal ion transporter, periplasmic ligand binding protein	Code: P; COG: COG1464 lipoprotein-28	Lipoprotein YaeC precursor	Lipoprotein YaeC	D-methionine ABC transporter, periplasmic D-methionine-binding protein identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363	Putative lipoprotein	Lipoprotein-28	ABC-type metal ion transport system, periplasmic component/surface antigen	ABC-type metal ion transport system, periplasmic component/surface antigen	lipoprotein, YaeC family TIGRFAM: lipoprotein, YaeC family; Twin-arginine translocation pathway signal PFAM: NLPA lipoprotein KEGG: bcn:Bcen_0582 lipoprotein YaeC	NLPA lipoprotein PFAM: NLPA lipoprotein KEGG: mmc:Mmcs_3503 NlpA lipoprotein	D-methionine-binding lipoprotein plpC	cytoplasmic membrane lipoprotein-28	D-methionine ABC transporter, periplasmic D- methionine-binding protein	Lipoprotein, YaeC family precursor	D-methionine ABC transporter, substrate-binding lipoprotein precursor	Putative lipoprotein	Lipoprotein NlpA	NLPA lipoprotein precursor	
ECOLI03541	Uncharacterized protein yicS	Uncharacterized protein yicS	Uncharacterized protein yicS	Residues 1 to 97 of 97 are 87 pct identical to residues 24 to 120 of a 120 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290293.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Uncharacterized protein yicS	putative transport protein	putative transport protein	Uncharacterized protein yicS	Uncharacterized protein yicS	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative transport protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative secreted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative secreted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03542	Purine ribonucleoside efflux pump nepI	Multidrug resistance protein-related protein	Purine ribonucleoside efflux pump nepI	Hypothetical protein yicM	Purine ribonucleoside efflux pump nepI	Residues 1 to 451 of 451 are 99 pct identical to residues 1 to 451 of a 451 aa protein from Escherichia coli K12 ref: NP_418118.1 putative transport protein	similar to Salmonella typhi CT18 putative inner membrane transport protein putative inner membrane transport protein	Purine ribonucleoside efflux pump nepI	probable membrane permease of unknown function	Code: G; COG: COG2814 putative transport protein	Code: G; COG: COG2814 putative transport protein	Code: G; COG: COG2814 putative transport protein	probable transporter, permease protein similar to AGR_L_2058p [Agrobacterium tumefaciens] Similar to swissprot:Q8U9C4 Putative location:bacterial inner membrane Psort-Score: 0.5140; go_component: membrane [goid 0016020]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810]	Purine ribonucleoside efflux pump nepI	Purine ribonucleoside efflux pump nepI	permease of the major facilitator superfamily	putative transport protein Code: G; COG: COG2814	putative transporter YicM	Transporter, MFS superfamily protein	Major facilitator superfamily MFS_1	Putative MFS family tranport protein	Nucleoside efflux permease	Predicted transporter	Nucleoside efflux permease	Major facilitator superfamily MFS_1	Purine ribonucleoside efflux pump NepI	Putative uncharacterized protein	Putative uncharacterized protein	Probable transporter, permease protein	
ECOLI03543	Uncharacterized protein yicN	Hypothetical protein yicN	Uncharacterized protein yicN	Residues 1 to 159 of 159 are 98 pct identical to residues 1 to 159 of a 159 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290297.1 orf, conserved hypothetical protein	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein yicN	Membrane protein	Putative membrane protein	conserved hypothetical protein	Membrane protein	conserved hypothetical protein putative 2-methylthioadenine synthetase	Putative uncharacterized protein	Putative uncharacterized protein yicN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	
ECOLI03544	Inner membrane protein yicO	Xanthine/uracil permease family protein	Xanthine/uracil permease family protein	Putative permease	Putative permease protein	Hypothetical protein yicO	Guanine-hypoxanthine permease	Putative uncharacterized protein	Permeases	Residues 1 to 470 of 470 are 99 pct identical to residues 1 to 470 of a 470 aa protein from Escherichia coli K12 ref: NP_418120.1 orf, conserved hypothetical protein	identified by match to protein family HMM PF00860 xanthine/uracil permease family protein	InterProMatches:IPR006043; Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) hypoxanthine/guanine permease	xanthine/uracil permease	Xanthine/uracil permease	xanthine/uracil permease family protein	Xanthine/uracil/vitamin C transporter	Xanthine/uracil/vitamin C permease	xanthine/uracil permease family protein	permease identified by match to protein family HMM PF00860; match to protein family HMM PF00916	Putative xanthine/uracil permeases family	Xanthine/uracil/vitamin C permease	Putative uncharacterized protein yicO	Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease KEGG: cch:Cag_1074 xanthine/uracil permease family protein	Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter KEGG: bur:Bcep18194_B0702 xanthine/uracil/vitamin C transporter	Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter KEGG: bcn:Bcen_3392 xanthine/uracil/vitamin C permease	permease identified by match to protein family HMM PF00860	Xanthine/uracil/vitamin C permease	conserved hypothetical protein Code: R; COG: COG2252	Guanine-hypoxanthine permease	
ECOLI03545	Adenine deaminase	Adenine deaminase	Adenine deaminase	Adenine deaminase	Adenine deaminase	Adenine deaminase	Adenine deaminase 1	Adenine deaminase 2	Adenine deaminase	Adenine deaminase	Adenine deaminase	Adenine deaminase	similar to GB:Y00636, GB:X06296, SP:P19256, PID:34347, PID:34350, and PID:540515; identified by sequence similarity; putative adenine deaminase	Adenine deaminase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ADENINE DEAMINASE PROTEIN	adenine deaminase	Adenine deaminase	Adenine deaminase	CDS_ID OB1030 adenine deaminase	adenine deaminase	Adenine deaminase	Adenine deaminase	Adenine deaminase	Residues 1 to 588 of 588 are 98 pct identical to residues 1 to 588 of a 588 aa protein from Escherichia coli K12 ref: NP_418121.1 probable adenine deaminase (synthesis xanthine)	Adenine deaminase	Adenine deaminase	InterProMatches:IPR006679; Molecular Function: adenine deaminase activity (GO:0000034), Biological Process: adenine catabolism (GO:0006146) adenine deaminase	adenine deaminase	similar to BRA0653, adenine deaminase Ade, adenine deaminase	
ECOLI03546	Hexose phosphate transport protein	UhpT	Sugar phosphate permease	Hexosephosphate transport protein	UhpT protein	putative sugar phosphate permease	Hexose phosphate transport protein	Putative glycerol-3-phosphate transporter	MFS family, hexose phosphate transport protein	Hexose phosphate transport protein	Hexose phosphate transport protein	Transporter, MFS superfamily	Sugar phosphate permease	Residues 1 to 463 of 463 are 100 pct identical to residues 1 to 463 of a 463 aa protein from Escherichia coli O157:H7 ref: NP_312630.1 hexose phosphate transport protein	Phosphoglycerate transporter protein	Hexose phosphate transport protein	IPR000849: GlpT transporter; IPR007114: Major facilitator superfamily MFS family, hexose phosphate transport protein	hexose phosphate transport protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0213 putative sugar phosphate transport protein	hexose phosphate transport protein	Phosphoglycerate transporter protein	best blastp match gb|AAK33461.1| (AE006504) putative glycerol-3-phosphate transporter [Streptococcus pyogenes M1 GAS] putative glycerol-3-phosphate transporter	identified by similarity to SP:P13408 sugar phosphate transporter	hexose phosphate transport protein	Sugar phosphate permease UhpC protein	Hexose phosphate transport protein	Similar to Escherichia coli hexose phosphate transport protein UhpT SW:UHPT_ECOLI (P13408) (463 aa) fasta scores: E(): 1.3e-81, 51.082% id in 462 aa, and to Pasteurella multocida putative hexose phosphate transport protein UhpT TR:Q9CL98 (EMBL:AE006172) (459 aa) fasta scores: E(): 1.6e-87, 53.896% id in 462 aa putative sugar phosphate transport protein	phosphoglycerate transporter protein	Code: G; COG: COG2271 hexose phosphate transport protein	
ECOLI03547	Regulatory protein uhpC	DEHA2G19294p;similar to uniprot|Q08268 Saccharomyces cerevisiae YOL119C MCH4 Protein with similarity to mammalian monocarboxylate permeases;	identified by match to PFAM protein family HMM PF03092 GlpT/PgpT/UhpT family protein	UhpC	Sugar phosphate permease	Regulatory protein	putative UhpC, sugar phosphate permease	Probable hexose phosphate transport protein	Regulatory protein uhpC	Sugar phosphate sensor protein UhpC	Regulatory protein UhpC	Regulator of uhpT	Probable regulatory protein uhpC	Sugar phosphate permease	Residues 1 to 440 of 440 are 99 pct identical to residues 1 to 440 of a 440 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290302.1 regulator of uhpT	Probable hexose phosphate transport protein	Putative regulatory protein	Similar to hexose phosphate transport protein hypothetical protein	Similar to hexose phosphate transport protein hypothetical protein	Similar to Chlamydia trachomatis probable hexose phosphate transport protein ct544 SWALL:UHPT_CHLTR (SWALL:O84548) (456 aa) fasta scores: E(): 1.8e-162, 83.85% id in 452 aa, and to Bacillus subtilis glycerol-3-phosphate transporter GlpT SWALL:GLPT_BACSU (SWALL:P37948) (444 aa) fasta scores: E(): 3.9e-60, 41.11% id in 450 aa putative hexose phosphate transport protein	MFS family hexose phosphate uptake and regulatory protein	sugar phosphate permease regulatory protein UhpC	Sugar MFS transporter, putative	Regulatory protein uhpC	Code: G; COG: COG2271 regulator of uhpT	Code: G; COG: COG2271 regulator of uhpT	solute carrier family 37 (glucose-6-phosphate transporter), member 4 [Source:HGNC Symbol;Acc:4061]	putative sugar transporter identified by match to protein family HMM PF07690	
ECOLI03548	Sensor protein uhpB	Putative two-component system sensor kinase	Putative uncharacterized protein	UhpB	Signal transduction histidine kinase	Two-component system sensor histidine kinase	putative UhpB, Signal transduction histidine kinase, glucose-6-phosphate specific	Sensor protein uhpB	Putative two-component system sensor kinase	Putative sensor histidine protein kinase UhpB	Histidine kinase	Sensor histidine protein kinase phosphorylates UhpA	SCD72A.10c, possible two-component sensor kinase, len: 456aa; similar to many eg. TR:O86631 (EMBL:AL031155) putative two-component sensor kinase from Streptomyces coelicolor (429 aa) fasta scores; opt: 929, z-score: 995.1, E(): 0, 42.7% identity in 422 aa overlap. Contains Pfam match to entry PF00512 signal, Histidine kinase and possible membrane-spanning hydrophobic regions. Contains possible hydrophobic membrane spanning regions putative two-component sensor kinase	Signal transduction histidine kinase, glucose-6- phosphate specific	Residues 1 to 463 of 463 are 99 pct identical to residues 39 to 501 of a 501 aa protein from Escherichia coli K12 ref: NP_418124.1 sensor histidine protein kinase phosphorylates UhpA	two-component sensor histidine kinase	IPR005467: Histidine kinase sensory histidine kinase in two-component regulatory sytem with UhpA	Putative sensor protein uhpB	sensor protein UhpB	Sensory transduction histidine kinases BaeS protein	Sensor protein uhpB	two-component system sensor protein	Code: T; COG: COG3851 sensor histidine protein kinase phosphorylates UhpA	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12107138; Product type rc : receptor sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression	sensor histidine protein kinase phosphorylates UhpA; Code: T; COG: COG3851 UhpB	Code: T; COG: COG3851 sensor histidine protein kinase phosphorylates UhpA	Sensor protein UhpB	periplasmic sensor signal transduction histidine kinase	Sensor protein UhpB	
ECOLI03549	Transcriptional regulatory protein uhpA	Two-component system response regulator protein	putative response regulator (repressor) in two-component regulatory system with UhpB (LuxR/UhpA family)	Transcriptional regulatory protein uhpA	Transcriptional regulatory protein uhpA	Residues 22 to 217 of 217 are 100 pct identical to residues 1 to 196 of a 196 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290304.1 response regulator, positive activator of uhpT transcription (sensor, uhpB)	IPR000792: Bacterial regulatory protein, LuxR family; IPR001092: Basic helix-loop-helix dimerization domain bHLH; IPR001789: Response regulator receiver response regulator (repressor) in two-component regulatory system wtih UhpB, regulates uhpT operon (LuxR/UhpA family)	similar to Salmonella typhi CT18 two-component system response regulator protein two-component system response regulator protein	Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain CitB protein	Transcriptional regulatory protein uhpA	Code: TK; COG: COG2197 response regulator, positive activator of uhpT transcription (sensor, uhpB)	response regulator, positive activator of uhpT transcription (sensor, uhpB); Code: TK; COG: COG2197 UhpA	sensor, uhpB; Code: TK; COG: COG2197 response regulator, positive activator of uhpT transcription	Transcriptional regulatory protein UhpA	Response regulator for uhpBA two component regulatory system	transcriptional regulatory protein UhpA identified by match to protein family HMM PF00072; match to protein family HMM PF00196	Two-component system response regulator UhpA	Transcriptional Regulatory protein uhpA Code: TK; COG: COG2197	Putative two-component system response regulator Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	response regulator for uhpBA two component regulatory system	Two component transcriptional regulator, LuxR family precursor	Response regulator (Activator) in two-component regulatory system wtih UhpB, regulates uhpT expression	Putative uncharacterized protein	Transcriptional regulatory protein UhpA	Two component transcriptional regulator, LuxR family	DNA-binding response regulator in two-component regulatory system wtih UhpB	Transcriptional regulatory protein UhpA	Two component transcriptional regulator, LuxR family precursor	Transcriptional regulatory protein UhpA	
ECOLI03550	Acetolactate synthase isozyme 1 small subunit	Acetolactate synthase isozyme I small subunit	Acetolactate synthase III, small subunit, putative	Acetolactate synthase isozyme I small subunit	Acetolactate synthase isozyme 1 small subunit	Residues 1 to 96 of 96 are 97 pct identical to residues 1 to 96 of a 96 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290309.1 acetolactate synthase I, valine sensitive, small subunit	Putative acetolactate synthase small subunit	IPR004789: Acetolactate synthase, small subunit acetolactate synthase I, small subunit	similar to Salmonella typhi CT18 acetohydroxy acid synthase I, small subunit acetohydroxy acid synthase I, small subunit	Putative acetolactate synthase small subunit	Acetolactate synthase I, small subunit	Acetolactate synthase isozyme I small subunit	Amino acid-binding ACT	Code: E; COG: COG0440 valine-sensitive acetolactate synthase I small subunit	Code: E; COG: COG0440 acetolactate synthase I valine sensitive small subunit	Code: E; COG: COG0440 acetolactate synthase I, valine sensitive, small subunit	Acetolactate synthase isozyme I small subunit	Putative acetolactate synthase small subunit	Acetolactate synthase isozyme I small subunit	Acetolactate synthase small subunit	acetolactate synthase Acetolactate synthase isozyme I small subunit (EC 2.2.1.6) (AHAS-I) (Acetohydroxy-acid synthase I small subunit) (ALS-I). InterPro: Acetolactate synthase small subunit acolac_sm: acetolactate synthase small subunit High confidence in function and specificity	Putative acetolactate synthase small subunit	acetolactate synthase I, valine sensitive, small subunit Code: E; COG: COG0440	Acetolactate synthase small subunit	acetolactate synthase small subunit	Acetolactate synthase, small subunit	Acetolactate synthase, small subunit	Acetolactate synthase small subunit	Acetolactate synthase, small subunit	
ECOLI03551	Acetolactate synthase isozyme 1 large subunit	Acetolactate synthase	Acetolactate synthase isozyme I large subunit	Acetolactate synthase	Acetolactate synthase	Acetolactate synthase	Acetolactate synthase	Residues 1 to 532 of 532 are 99 pct identical to residues 31 to 562 of a 562 aa protein from Escherichia coli O157:H7 ref: NP_312639.1 acetolactate synthase I large subunit	Acetolactate synthase	IPR000399: Pyruvate decarboxylase acetolactate synthase I, large subunit, valine sensitive	similar to Salmonella typhi CT18 acetohydroxy acid synthase I, small subunit acetohydroxy acid synthase I, small subunit	Acetolactate synthase	Acetolactate synthase	putative acetolactate synthase large subunit	Acetolactate synthase, large subunit, biosynthetic type	Code: EH; COG: COG0028 valine-sensitive acetolactate synthase large subunit	Code: EH; COG: COG0028 acetolactate synthase I valine-sensitive large subunit	Code: EH; COG: COG0028 acetolactate synthase I,valine-sensitive, large subunit	Acetolactate synthase	Putative acetolactate synthase large subunit	Acetolactate synthase	acetolactate synthase, large subunit, biosynthetic type	Acetolactate synthase large subunit	acetolactate synthase Acetolactate synthase isozyme I large subunit (AHAS-I) (Acetohydroxy-acid synthase I large subunit) (ALS-I). InterPro: Acetolactate synthase large subunit biosynthetic type acolac_lg: acetolactate synthase large subunit,biosynthetic type High confidence in function and specificity	Putative acetolactate synthase large subunit	Acetolactate synthase, large subunit, biosynthetic type	acetolactate synthase I,valine-sensitive, large subunit Code: EH; COG: COG0028	Acetolactate synthase large subunit	acetolactate synthase large subunit	
ECOLI03554	Multidrug resistance protein D	Permease	Multidrug resistance protein D	Multidrug resistance protein D	Multidrug resistance protein D	Multidrug resistance protein D	2-module integral membrane pump; multidrug resistance	Multidrug resistance protein D	Residues 1 to 350 of 350 are 100 pct identical to residues 47 to 396 of a 396 aa protein from Escherichia coli K12 ref: NP_418129.1 2-module integral membrane pump; multidrug resistance	EmrD protein	IPR007114: Major facilitator superfamily MFS family, multidrug tranport protein	similar to Salmonella typhi CT18 multidrug resistance protein D multidrug resistance protein D	multidrug resistance protein D	MFS family multidrug tranport protein	Drug resistance transporter Bcr/CflA subfamily	multidrug resistance; Code: GEPR; COG: COG0477 2-module integral membrane pump	multidrug resistance; Code: GEPR; COG: COG0477 2-module integral membrane pump	multidrug efflux transport protein D	multidrug resistance; Code: GEPR; COG: COG0477 2-module integral membrane pump	Multidrug resistance protein D	Multidrug resistance protein D	multidrug resistance protein D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710	Multidrug resistance protein D precursor	Multidrug resistance protein D Code: GEPR; COG: COG0477	multidrug efflux system protein	Multidrug/H+ antiporter, major facilitator superfamily (MFS) precursor	KEGG: son:SO2389 multidrug resistance protein D multidrug resistance protein D	2-module integral membrane pump; multidrug resistance	Putative uncharacterized protein	
ECOLI03555	Uncharacterized protein yidF	Hypothetical protein yidF	Putative transcriptional regulator	Residues 1 to 165 of 165 are 99 pct identical to residues 1 to 165 of a 165 aa protein from Escherichia coli K12 ref: NP_418130.1 putative transcriptional regulator	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	Code: R; COG: COG0641 putative transcriptional regulator	Code: R; COG: COG0641 putative transcriptional regulator	Code: R; COG: COG0641 putative transcriptional regulator	Putative uncharacterized protein	Putative uncharacterized protein yidF	putative transcriptional regulator Code: R; COG: COG0641	conserved hypothetical protein	Putative regulator	Putative uncharacterized protein	Putative uncharacterized protein	Predicted DNA-binding transcriptional regulator	Putative uncharacterized protein	Putative transcriptional regulator	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	F165	F165	F165	Putative uncharacterized protein yidF	Putative uncharacterized protein	
ECOLI03556	Inner membrane protein yidG	Inner membrane protein yidG	Inner membrane protein yidG	Residues 1 to 120 of 120 are 100 pct identical to residues 1 to 120 of a 120 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290314.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein yidG	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yidG	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Inner membrane protein YidG	Inner membrane protein YidG	
ECOLI03557	Inner membrane protein yidH	pseudo	Predicted membrane protein	Inner membrane protein yidH	Putative uncharacterized protein	Putative uncharacterized protein	Inner membrane protein yidH	similar to AL096811-8|CAB46785.1| percent identity: 43 in 109 aa conserved hypothetical protein	SCI30A.08, putative membrane protein, len: 130 aa; similar to SW:YIDH_ECOLI hypothetical protein from Escherichia coli (115 aa) fasta scores; opt: 291, z-score: 382.3, E(): 5.8e-14, (47.3% identity in 112 aa overlap).  Contains possible hydrophobic membrane spanning regions putative membrane protein	Residues 1 to 115 of 115 are 100 pct identical to residues 1 to 115 of a 115 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290315.1 orf, conserved hypothetical protein	Uncharacterized protein Rv2272/MT2333	Mb2295, -, len: 122 aa. Equivalent to Rv2272, len: 122 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 122 aa overlap). Probable conserved transmembrane PROTEIN, similar to YIDH_ECOLI P31445 hypothetical 12.8 kd protein (115 aa), FASTA scores, opt: 291, E(): 2.9e-14, (45.6% identity in 103 aa overlap), similar to MTCY339.37c, (35.0% identity in 100 aa overlap). PROBABLE CONSERVED MEMBRANE PROTEIN	putative inner membrane protein	similar to Salmonella typhimurium putative inner membrane protein putative inner membrane protein	Putative uncharacterized protein	Putative inner membrane protein	putative membrane protein	probable conserved membrane protein	Code: S; COG: COG2149 conserved hypothetical protein	Code: S; COG: COG2149 conserved hypothetical protein	Code: S; COG: COG2149; orf conserved hypothetical protein	Putative membrane protein	Hypothetical protein	Putative uncharacterized protein yidH	protein of unknown function DUF202 PFAM: protein of unknown function DUF202 KEGG: mmc:Mmcs_5317 protein of unknown function DUF202	conserved transmembrane protein membrane protein	hypothetical protein similar to conserved transmembrane protein Mapped to H37Rv Rv2272	Probable conserved membrane protein	protein of unknown function DUF202 PFAM: protein of unknown function DUF202 KEGG: mmc:Mmcs_5317 protein of unknown function DUF202	
ECOLI03558	Inner membrane protein yidI	Residues 1 to 137 of 137 are 89 pct identical to residues 1 to 149 of a 149 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290316.1 orf, conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yidI	Putative uncharacterized protein yidI	Putative uncharacterized protein yidI	YidI protein	Predicted inner membrane protein	Predicted inner membrane protein	predicted inner membrane protein	Predicted inner membrane protein	Putative membrane protein	
ECOLI03559	Uncharacterized sulfatase yidJ	Putative sulfatase yidJ	Putative sulfatase	Arylsulfatase precursor, putative	Putative sulfatase	Putative sulfatase	SC5F1.01, possible sulfatase (fragment), len: >136 aa; low similarity to SW:YIDJ_ECOLI (EMBL:L10328) Escherichia coli hypothetical 57.3 kDa protein in EmrD-GlvG intergenic region putative sulfatase YdjI (EC 3.1.6.-), 497 aa; fasta scores: opt: 147 z-score: 185.4 E(): 0.0085; 29.6% identity in 115 aa overlap SC8G12.23, possible sulphatase, partial CDS, len: >430 aa.  Similar to many Eukaryotic sulphatases e.g. Homo sapiens (Human) SW:IDS_HUMAN(EMBL:M58342) iduronate 2-sulfatase precursor (EC 3.1.6.13) (550 aa), fasta scores opt: 326 z-score: 382.2 E(): 7.9e-14 28.4% identity in 423 aa overlap. Also similar to Escherichia coli TR:YIDJ_ECOLI(EMBL:L10328) hypothetical 57.3 kd protein (497 aa), fasta scores opt: 221 z-score:0.0 E(): 0.0 31.23% identity in 397 aa overlap. Contains a Prosite hit to PS00523 Sulfatases signature 1 and a Pfam match to entry PF00884 Sulfatase, Sulfatase. putative sulfatase	arylsulfatase family, member K [Source:HGNC Symbol;Acc:25239]	Code: P; COG: COG3119 putative sulfatase	Putative sulfatase	probable sulfatase	transcript_id=ENSFCAT00000010825	sulfatase	sulfatase PFAM: sulfatase KEGG: yps:YPTB3074 putative sulfatase	putative sulfatase Code: P; COG: COG3119	predicted sulfatase/phosphatase YidJ	Magnaporthe grisea hypothetical protein	Putative sulfatase family protein	Sulfatase	Putative uncharacterized protein	Sulfatase	Sulfatase	Probable sulfatase	Predicted sulfatase/phosphatase	Sulfatase	sulfatase PFAM: sulfatase KEGG: rrs:RoseRS_3340 sulfatase	Putative uncharacterized protein	locus:Ppa-sul-1; status:Predicted	Sulfatase	
ECOLI03560	Uncharacterized symporter yidK	Na+/myo-inositol cotransporter	Putative symporter yidK	PMID: 8652595 best DB hits: BLAST: swissprot:P31448; YIDK_ECOLI HYPOTHETICAL 62.1 KD PROTEIN IN; E=8e-94 gb:AAG58882.1; AE005599_14 (AE005599) putative cotransporter; E=2e-93 ddbj:BAB05941.1; (AP001514) Na+myo-inositol cotransporter; E=7e-87 COG: yidK; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=8e-95 BH2222; COG0591 Na+/proline, Na+/panthothenate symporters and; E=7e-88 panF; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=4e-11 PFAM: PF00474; Sodium:solute symporter family; E=2.8e-33 sodium/glucose cotransporter	Putative sodium/myo-inositol cotransporter	Putative cotransporter	Na+/myo-inositol cotransporter	Residues 1 to 571 of 571 are 98 pct identical to residues 1 to 571 of a 571 aa protein from Escherichia coli K12 ref: NP_418135.1 putative cotransporter	Similar to putative Na+/myo-inositol transporter protein YidK of Escherichia coli	Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) Na+/solute symporter	Similar to Q88EE1 Sodium-solute symporter, putative from Pseudomonas putida (strain KT2440) (459 aa). FASTA: opt: 279 Z-score: 311.8 E(): 1.8e-09 Smith-Waterman score: 300; 20.863identity in 417 aa overlap. ORF ftt1277c Sodium-solute symporter family protein	transcript_id=ENSDNOT00000006310	Putative sodium:solute symporter	sodium/solute symporter family protein identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813	Transporter, solute:sodium symporter (SSS) family	Sodium-solute symporter family protein Similar to Q88EE1 Sodium-solute symporter, putative from Pseudomonas putida (strain KT2440) (459 aa). FASTA: opt: 279 Z-score: 311.8 E(): 1.8e-09 Smith-Waterman score: 300; 20.863identity in 417 aa overlap. ORF ftt1277c	Putative symporter YidK	sodium:solute symporter family protein	putative sodium/myo-inositol cotransporter COG4146 Predicted symporter	Sodium:solute symporter family protein identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813	Sodium/glucose cotransporter	Possible SSS family solute:sodium (Na+) symporter	Sodium-solute symporter family protein	putative cotransporter Code: R; COG: COG4146	solute:sodium symporter	Sodium-solute symporter family protein	putative symporter YidK	transcript_id=ENSMICT00000008997	Sodium-solute symporter family protein	
ECOLI03562	Putative 6-phospho-alpha-glucosidase	pseudo	Truncated 6-phospho-alpha-glucosidase	pseudo	pseudo	
ECOLI03561	Uncharacterized HTH-type transcriptional regulator yidL	Msm operon regulatory protein	Msm operon regulatory protein	Putative ARAC-type regulatory protein	Transcriptional regulator	Residues 1 to 297 of 297 are 99 pct identical to residues 11 to 307 of a 307 aa protein from Escherichia coli K12 ref: NP_418136.1 putative ARAC-type regulatory protein	Transcriptional regulator protein	MSM (multiple sugar metabolism) operon regulatory protein	identified by match to protein family HMM PF00165; match to protein family HMM PF02311 transcriptional regulator, AraC family	putative AraC family transcriptional regulator similarity:fasta; SWALL:Q9KIF4 (EMBL:AF235048); Rhizobium meliloti; AgpT; agpT; length 313 aa; 291 aa overlap; query 48-337 aa; subject 2-292 aa similarity:fasta; SWALL:Q989F9 (EMBL:AP003009); Rhizobium loti; transcriptional regulator; length 351 aa; 324 aa overlap; query 17-337 aa; subject 13-336 aa	Hypothetical transcriptional regulator YidL	Hypothetical transcriptional regulator YidL	helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation identified by match to protein family HMM PF00165	putative ARAC-type regulatory protein Code: K; COG: COG2207	msm operon regulatory protein MsmR equivalent gene in S.pneumoniae TIGR4 = SP1899; equivalent gene in S.pneumoniae R6 = spr1714; identified by match to protein family HMM PF00165; match to protein family HMM PF02311	predicted DNA-binding transcriptional regulator YidL	AraC-like transcriptional regulator (HTH and ligand binding domain)	Transcriptional regulator	Putative uncharacterized protein	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, AraC family	Putative uncharacterized protein	Msm operon regulatory protein	Msm operon regulatory protein	Transcriptional regulator, AraC family protein	Probable transcriptional regulator protein, AraC family	Msm operon regulatory protein	
ECOLI03562	Putative 6-phospho-alpha-glucosidase	pseudo	Truncated 6-phospho-alpha-glucosidase	pseudo	pseudo	

ECOLI03564	Putative permease IIC component glvC	PTS system, alpha-glucoside-specific IIBC component	Putative PTS component	PTS system, arbutin-like IIBC component	PTS system, arbutin-like IIBC component	identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826 PTS system, IIBC components	PTS system arbutin-like IIBC component	InterProMatches:IPR004719, IPR010975; Molecular Function: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (GO:0008982), Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401), Cellular Component: integral to membrane (GO:0016021) phosphotransferase system (PTS) maltose-specific enzyme IICB component	PTS system, glucose/maltose/N-acetylglucosamine-specific enzyme II, BC component	PTS system arbutin-like IIBC component	Ortholog of S. aureus MRSA252 (BX571856) SAR2408 PTS system, arbutin-like IIBC component	PTS system, arbutin-like IIBC component	PTS system, arbutin-like IIBC component	Similar to Bacillus subtilis PTS system, arbutin-like IIBC component GlvC SW:PTIB_BACSU (P54715) (527 aa) fasta scores: E(): 2.4e-119, 56.43% id in 528 aa, and to Escherichia coli PTS system, arbutin-like IIC component GlvC SW:PTIC_ECOLI (P31452) (368 aa) fasta scores: E(): 2e-77, 55.31% id in 367 aa PTS system, arbutin-like IIBC component	identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR02005 PTS system, IIBC components	similar to gi|27468815|ref|NP_765452.1| [Staphylococcus epidermidis ATCC 12228], percent identity 85 in 526 aa, BLASTP E(): 0.0 PTS system arbutin-like IIBC component	PTS system, arbutin-like IIBC component identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR02005	PTS system arbutin-like IIBC component	PTS system component, putative	pts system maltose-specific eiicb component identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00852; match to protein family HMM TIGR02005	PTS system, alpha-glucoside-specific IIBC component	PTS system alpha-glucoside-specific EIICB component	PTS system, IIbc component	PTS system, alpha-glucoside-specific IIBC subunit	PTS system, arbutin-like IIBC component	Putative PTS family enzyme IIC	PTS system, alpha-glucoside-specific IIBC subunit precursor	GlvC	PTS system, alpha-glucoside-specific IIBC subunit TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC KEGG: sas:SAS2216 PTS system, arbutin-like IIBC component	
ECOLI03566	Putative transport protein yidE	Putative transport protein HI0035	Uncharacterized transporter BT_2092	Putative transport protein PM1071	Putative transport protein yidE	Uncharacterized transporter Cgl2211/cg2425	putative membrane/transport protein	Putative transport protein yidE	Putative transport protein ECA4401	Uncharacterized transporter PG_1411	Uncharacterized transporter PPA2034	Uncharacterized transporter DIP0830	Putative transport protein yidE	similar to AX066613-1|CAC26534.1| percent identity: 74 in 542 aa putative transport protein	Residues 1 to 561 of 561 are 100 pct identical to residues 1 to 561 of a 561 aa protein from Escherichia coli O157:H7 ref: NP_312652.1 putative transport protein	Putative transport protein YPO4083/y4100/YP_3992	paral putative transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative transport protein YPTB3906	Similar to: HI0035, Y035_HAEIN conserved hypothetical membrane protein	Putative transport protein yidE	YidE/YbjL duplication	Code: R; COG: COG2985 putative transport protein	Code: R; COG: COG2985 putative transport protein	Code: R; COG: COG2985 putative transport protein	Putative transport protein yidE	Putative membrane protein	putative transport protein	Putative transport protein yidE	
ECOLI03565	Uncharacterized HTH-type transcriptional regulator yidP	GntR-family transcriptional regulator	Putative transcriptional regulator	Residues 1 to 224 of 224 are 99 pct identical to residues 1 to 224 of a 238 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290322.1 putative transcriptional regulator	Code: K; COG: COG2188 putative transcriptional regulator	Code: K; COG: COG2188 putative transcriptional regulator	Code: K; COG: COG2188 putative transcriptional regulator	Transcriptional regulator	GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07702	transcriptional regulator, GntR family identified by match to protein family HMM PF00392; match to protein family HMM PF07702	GntR family transcription regulatory protein	Transcriptional regulator, GntR-family	Transcriptional regulator GntR family	putative transcriptional regulator Code: K; COG: COG2188	Transcriptional regulator, GntR family	Putative bacterial regulatory protein, GntR	Transcriptional regulator, GntR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Putative uncharacterized protein	Putative uncharacterized protein	Putative TRANSCRIPTION REGULATOR PROTEIN; GntR family	Transcriptional regulator, GntR family	Putative transcriptional regulator YidP	Putative GntR-family transcriptional regulator	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	
ECOLI03567	Small heat shock protein ibpB	Heat shock protein, Hsp20 family	Small heat shock protein ibpB	Small heat shock protein ibpB	Small heat shock protein ibpB	Product confidence : probable Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE SMALL HEAT SHOCK PROTEIN	Small heat shock protein ibpB	Putative small heat shock protein	Residues 12 to 155 of 155 are 100 pct identical to residues 1 to 144 of a 144 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290324.1 heat shock protein	Small heat shock protein ibpB	identified by match to protein family HMM PF00011 heat shock protein, Hsp20 family	Molecular chaperone small heat shock protein	IPR002068: Heat shock protein Hsp20 small heat shock protein	similar to Salmonella typhi CT18 heat shock protein B heat shock protein B	Small heat shock protein ibpB	Heat-shock protein IbpA	Small heat shock protein ibpB	identified by match to protein family HMM PF00011 heat-shock protein IbpA	Code: O; COG: COG0071 heat shock protein	COG0071, IbpA, Molecular chaperone (small heat shock protein). pfam00011, HSP20, Hsp20/alpha crystallin family. Heat shock protein, Hsp20 family	Code: O; COG: COG0071 heat shock protein	heat shock protein Hsp20	heat shock protein Hsp20	Code: O; COG: COG0071 heat shock protein	putative small heat shock protein similarity:fasta; with=UniProt:HSPH_BRAJA (EMBL:BAJ10144); Bradyrhizobium japonicum.; hspH; Small heat shock protein hspH.; length=151; id 44.526; 137 aa overlap; query 9-140; subject 7-138 similarity:fasta; with=UniProt:Q92SI1 (EMBL:SME591783); Rhizobium meliloti (Sinorhizobium meliloti).; PROBABLE SMALL HEAT SHOCK PROTEIN.; length=143; id 83.217; 143 aa overlap; query 1-141; subject 1-143	heat shock protein Hsp20 PFAM: heat shock protein Hsp20: (2.5e-17) KEGG: sil:SPO0895 heat shock protein, Hsp20 family, ev=1e-64, 89% identity	Heat shock protein	Heat shock protein Hsp20	Heat shock protein	
ECOLI03568	Small heat shock protein ibpA	Heat shock protein, Hsp20 family	16 kDa heat shock protein A	Small heat shock protein	Small heat shock protein ibpA	Putative 16kDa heat shock protein A	Small heat shock protein ibpA	similar to GB:X01703, GB:K00557, SP:P04687, SP:P05215, PID:340019, PID:340021, and PID:37492; identified by sequence similarity; putative 16 kDa heat shock protein A	16 kDa heat shock protein A	16 kDa heat shock protein A	Small heat shock protein ibpA	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE HEAT SHOCK PROTEIN	Heat shock protein, Hsp20 family	HEAT SHOCK PROTEIN A	16 kDa heat shock protein A	Small heat shock protein ibpA	small heat shock protein	Small heat shock protein	16 kDa heat shock protein A	Residues 3 to 139 of 139 are 100 pct identical to residues 1 to 137 of a 137 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290325.1 heat shock protein	Small heat shock protein ibpA	identified by match to protein family HMM PF00011 heat shock protein, Hsp20 family	Molecular chaperone small heat shock protein	Heat shock protein A	IPR002068: Heat shock protein Hsp20 small heat shock protein	similar to Salmonella typhi Ty2 heat shock protein A heat shock protein A	similar to BRA0051, 16 kDa heat shock protein A IbpA, 16 kDa heat shock protein A	Small heat shock protein	Small heat shock protein ibpA	
ECOLI03569	Uncharacterized protein yidQ	Hypothetical protein yidQ	Putative lipoprotein	Putative uncharacterized protein yidQ	Residues 1 to 110 of 110 are 100 pct identical to residues 1 to 110 of a 110 aa protein YIDQ_ECOLI sp: P31454 orf, conserved hypothetical protein	Putative lipoprotein	Similar to putative lipoprotein YidQ of Escherichia coli	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	Putative outer membrane lipoprotein	Code: R; COG: COG5645 conserved hypothetical protein	Code: R; COG: COG5645 conserved hypothetical protein	Code: R; COG: COG5645; orf conserved hypothetical protein	Putative lipoprotein	Putative lipoprotein precursor	Putative uncharacterized protein yidQ	Lipoprotein precursor	Putative lipoprotein precursor	conserved hypothetical protein Code: R; COG: COG5645	Lipoprotein precursor	conserved outer membrane protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yidQ	Putative uncharacterized protein	Putative uncharacterized protein	Conserved outer membrane protein	Putative lipoprotein	Putative uncharacterized protein	
ECOLI03570	Uncharacterized protein yidR	Hypothetical protein yidR	Putative uncharacterized protein	best DB hits: BLAST: swissprot:P31455; YIDR_ECOLI HYPOTHETICAL 46.4 KD PROTEIN IN; E=5e-86 gb:AAA62041.1; (L10328) f416 [Escherichia coli]; E=3e-85 gb:AAG58891.1; AE005600_9 (AE005600) orf, hypothetical protein; E=3e-85 COG: RP302; COG0823 Periplasmic component of the Tol biopolymer transport; E=0.004 PFAM: PF02039; Adrenomedullin; E=0.72 conserved hypothetical protein	Putative uncharacterized protein yidR	Residues 1 to 424 of 424 are 95 pct identical to residues 1 to 416 of a 416 aa protein from Escherichia coli K12 ref: NP_418144.1 orf, conserved hypothetical protein	Similar to unknown protein YidR of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 putative ATP/GTP-binding protein putative ATP/GTP-binding protein	Putative uncharacterized protein yidR	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yidR	Hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative ATP/GTP-binding protein	Putative uncharacterized protein yidR	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03572	D-galactonate transporter	D-galactonate transporter	Putative D-galactonate transporter	MFS transporter, phthalate permease family	Residues 1 to 445 of 445 are 99 pct identical to residues 1 to 445 of a 445 aa protein from Escherichia coli K12 ref: NP_418146.1 D-galactonate transport	membrane protein, putative	Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021) D-galactonate transporter	IPR000849: GlpT transporter; IPR004744: D-galactonate transporter; IPR005828: General substrate transporter;IPR007114: Major facilitator superfamily MFS family, D-galactonate transport protein	similar to Salmonella typhimurium MFS family, D-galactonate transport protein MFS family, D-galactonate transport protein	MFS family D-galactonate transport protein	identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00893 MFS transporter, phthalate permease family	D-galactonate transporter	Code: GEPR; COG: COG0477 D-galactonate transport	Major facilitator superfamily MFS_1	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8 [Source:HGNC Symbol;Acc:20151]	D-galactonate transporter	Major facilitator superfamily (MFS_1) transporter	Major facilitator superfamily MFS_1	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1: (4.2e-34) KEGG: sil:SPO3820 transmembrane transporter, major facilitator family, ev=0.0, 80% identity	D-galactonate transporter	Major facilitator superfamily MFS_1	D-galactonate transporter	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: bur:Bcep18194_B2776 major facilitator superfamily (MFS_1) transporter	transcript_id=ENSOGAT00000013840	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: bcn:Bcen_4772 major facilitator superfamily MFS_1	D-galactonate transport Code: GEPR; COG: COG0477	D-galactonate transporter	D-galactonate transporter	glycerol-3-phosphatase transporter	
ECOLI03571	Protein cbrA	Protein cbrA	Residues 1 to 349 of 361 are 97 pct identical to residues 13 to 361 of a 361 aa protein from Escherichia coli K12 ref: NP_418145.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Code: C; COG: COG0644 conserved hypothetical protein	Code: C; COG: COG0644; orf conserved hypothetical protein	Protein cbrA	geranylgeranyl reductase	hypothetical protein similarity to COG0644 Dehydrogenases (flavoproteins)(Evalue: 1E-63)	conserved hypothetical protein identified by similarity to GB:AAN83046.1	geranylgeranyl reductase	Protein cbrA	Geranylgeranyl reductase	geranylgeranyl reductase TIGRFAM: geranylgeranyl reductase PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase KEGG: rpb:RPB_3990 geranylgeranyl reductase	conserved hypothetical protein Code: C; COG: COG0644	conserved hypothetical protein putative dehydrogenase	Geranylgeranyl hydrogenase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Geranylgeranyl reductase precursor	Putative uncharacterized protein	Putative uncharacterized protein	Geranylgeranyl reductase	
ECOLI03573	D-galactonate dehydratase	Probable galactonate dehydratase protein	Putative galactonate dehydratase protein	mandelate racemase/muconate lactonizing enzyme family	go_function: catalytic activity [goid 0003824]; go_process: metabolism [goid 0008152] mandelate racemase/muconate lactonizing enzyme, putative	D-galactonate dehydratase	Product confidence : probable Gene name confidence : putative probable galactonate dehydratase protein	Mandelate racemase/muconate lactonizing enzyme family protein	galactonate dehydratase	DgoA protein	CDS_ID OB2215; may be truncated hypothetical protein	D-galactonate dehydratase	Galactonate dehydratase protein	Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolism (GO:0008152), Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolism (GO:0008152) Mandelate racemase/muconate lactonizing enzyme,Mandelate racemase/muconate lactonizing enzyme	galactonate dehydratase	in bifunctional: 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; IPR001354: Mandelate racemase/muconate lactonizing enzyme galactonate dehydratase	D-galactonate dehydratase	D-galactonate dehydratase	4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase	identified by similarity to SP:P31458; match to protein family HMM PF01188; match to protein family HMM PF02746 galactonate dehydratase	Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme	mandelate racemase/muconate lactonizing enzyme	Mandelate racemase/muconate lactonizing enzyme	Mandelate racemase/muconate lactonizing enzyme	putative epimerase similarity:fasta; with=UniProt:Q6J674_9BURK (EMBL:AY593480); Collimonas fungivorans.; L-alanine-DL-glutamate epimerase.; length=382; id 78.272; 382 aa overlap; query 1-382; subject 1-382 similarity:fasta; with=UniProt:Q92W53_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Probable galactonate dehydratase protein (EC 4.2.1.6).; length=382; id 90.314; 382 aa overlap; query 1-382; subject 1-382	Mandelate racemase/muconate lactonizing enzyme-like	Galactonate dehydratase	Galactonate dehydratase	mandelate racemase/muconate lactonizing enzyme	
ECOLI03574	2-dehydro-3-deoxy-6-phosphogalactonate aldolase	4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase	Putative uncharacterized protein	4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase	Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	Putative conserved protein	similar to GP:15073755, GB:M86737, SP:Q08945, and PID:184242; identified by sequence similarity; putative 2-dehydro-3-deoxyphosphogalactonate aldolase, putative	DgoA protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE KHG/KDPG ALDOLASE PROTEIN	2-DEHYDRO-3-DEOXYPHOSPHOGALACTONATE ALDOLASE	2-dehydro-3-deoxyphosphogluconate aldolase	SCE65.31c probable aldolase, len: 225 aa; similar to TR:AAD35160 (EMBL:AE001693) Thermotoga maritima 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TM0066, 205 aa; fasta scores: opt: 437 z-score: 460.7 E(): 2.8e-18; 39.1% identity in 174 aa overlap and to SW:ALKH_BACSU (EMBL:L47838) Bacillus subtilis Khg/KdpG aldolase KdgA, 196 aa ;fasta scores: opt: 379 z-score: 401.8 E(): 5.3e-15; 37.9% identity in 177 aa overlap. Contains match to Pfam entry PF01081 Aldolase, KDPG and KHG aldolase putative aldolase	Putative 2-dehydro-3-deoxyphosphogalactonate aldolase protein	4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3- deoxyphosphogluconate aldolase protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase	in bifunctional: 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase galactonate dehydratase	similar to BRA0938, 2-dehydro-3-deoxyphosphogalactonate aldolase, hypothetical 2-dehydro-3-deoxyphosphogalactonate aldolase, hypothetical	4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase	possible aldolase	4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase	2-dehydro-3-deoxyphosphogluconate aldolase , 4- hydroxy-2-oxoglutarate aldolase	similar to gi|29376770|ref|NP_815924.1| [Enterococcus faecalis V583], percent identity 45 in 146 aa, BLASTP E(): 3e-31 putative 2-dehydro-3-deoxyphosphogluconate aldolase	KDPG and KHG aldolase	2-dehydro-3-deoxyphosphogluconate aldolase	2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase	KDPG and KHG aldolase	KDPG and KHG aldolase	putative 2-dehydro-3-deoxy-6-phosphogalactonate aldolase similarity:fasta; with=UniProt:DGOA_ECOLI (EMBL:E65171); Escherichia coli.; dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.21) (6- phospho-2-dehydro-3-deoxygalactonate aldolase) (2-oxo-3- deoxygalactonate 6-phosphate aldolase).; length=205; id 47.739; 199 aa overlap; query 10-208; subject 6-204 similarity:fasta; with=UniProt:Q8UHH9 (EMBL:H97444); Agrobacterium tumefaciens (strain C58/ATCC 33970).; kdgA; KHG-KDPG bifunctional aldolase (AGR_C_1269p).; length=209; id 76.812; 207 aa overlap; query 3-209; subject 2-208	2-dehydro-3-deoxyphosphogalactonate aldolase	
ECOLI03575	2-dehydro-3-deoxygalactonokinase	2-oxo-3-deoxygalactonate kinase	Putative 2-keto-3-deoxy-galactonokinase	2-dehydro-3-deoxygalactonokinase	2-dehydro-3-deoxygalactonokinase	Residues 1 to 292 of 292 are 97 pct identical to residues 1 to 292 of a 292 aa protein from Escherichia coli K12 ref: NP_418148.1 2-oxo-3-deoxygalactonate kinase	Probable 2-dehydro-3-deoxygalactonokinase protein	2-dehydro-3-deoxygalactonokinase, putative	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark 2-oxo-3-deoxygalactonate kinase	2-oxo-3-deoxygalactonate kinase	2-oxo-3-deoxygalactonate kinase	2-oxo-3-deoxygalactonate kinase	2-oxo-3-deoxygalactonate kinase	Code: G; COG: COG3734 2-oxo-3-deoxygalactonate kinase	HMMPfam: 2-keto-3-deoxy-galactonokinase (catalyzes the 2nd step in D-galactonate degradation) putative 2-dehydro-3-deoxygalactonokinase	2-keto-3-deoxy-galactonokinase	2-dehydro-3-deoxygalactonokinase	2-keto-3-deoxy-galactonokinase	putative 2-oxo-3-deoxygalactonate kinase	2-keto-3-deoxy-galactonokinase PFAM: 2-keto-3-deoxy-galactonokinase: (5.5e-49) KEGG: rsp:RSP_1371 putative 2-dehydro-3-deoxygalactonokinase, ev=1e-77, 49% identity	2-dehydro-3-deoxygalactonokinase	2-oxo-3-deoxygalactonate kinase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Putative 2-dehydro-3-deoxygalactonokinase	2-dehydro-3-deoxygalactonokinase	2-dehydro-3-deoxygalactonokinase, putative	2-dehydro-3-deoxygalactonokinase	2-oxo-3-deoxygalactonate kinase Code: G; COG: COG3734	2-keto-3-deoxy-galactonokinase PFAM: 2-keto-3-deoxy-galactonokinase KEGG: atc:AGR_C_1271 2-dehydro-3-deoxygalactonokinase	2-dehydro-3-deoxygalactonokinase	
ECOLI03576	Galactonate operon transcriptional repressor	Putative GntR-family transcriptional regulator	Galactonate operon transcriptional repressor	Putative GntR-famly transcriptional regulator	CDS_ID OB2847; GntR family transcriptional regulator	Residues 1 to 229 of 229 are 99 pct identical to residues 1 to 229 of a 229 aa protein DGOR_ECOLI sp: P31460 GALACTONATE OPERON TRANSCRIPTIONAL REPRESSOR	Transcriptional regulator protein	transcriptional regulator, GntR family	IPR000524: Bacterial regulatory protein, GntR family galactonate operon transcriptional repressor (GntR family)	Galactonate operon transcriptional repressor	putative galactonate operon transcriptional repressor	GntR-like protein	probable transcriptional regulator protein, GntR family similar to SMb20509 [Sinorhizobium meliloti] Similar to swissprot:Q92W54 Putative location:bacterial cytoplasm Psort-Score: 0.5700; go_component: intracellular [goid 0005622]; go_component: extrachromosomal DNA [goid 0046821]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	Galactonate operon transcriptional repressor	transcriptional regulator, GntR family	Putative transcriptional regulator	GntR-like	Galactonate operon transcriptional repressor	Transcriptional regulator	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: pol:Bpro_2160 transcriptional regulator, GntR family	transcriptional regulator, GntR family, putative	GntR-like PFAM: regulatory protein GntR, HTH GntR-like KEGG: pfo:Pfl_3228 regulatory protein GntR, HTH	Transcriptional regulator, GntR family protein	putative galactonate operon transcriptional repressor DgoR	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcriptional repressor for galactonate utilization	Transcriptional regulator, GntR family	
ECOLI03577	Uncharacterized protein yidX	Putative conserved protein	Putative replicase	Residues 1 to 218 of 218 are 99 pct identical to residues 1 to 218 of a 218 aa protein from Escherichia coli O157:H7 ref: NP_312658.1 putative replicase	Putative lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative lipoprotein	putative replicase	Putative uncharacterized protein	Putative lipoprotein	Lipoprotein	putative replicase	Lipoprotein	conserved hypothetical protein	Putative uncharacterized protein	Predicted lipoproteinC	Putative lipoprotein	Putative lipoprotein	Putative replicase precursor	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	O197	Putative uncharacterized protein	O197	Putative replicase	
ECOLI03578	Phosphatase yidA	Phosphoglycolate phosphatase	Hydrolase, haloacid dehalogenase-like family	Putative uncharacterized protein STY3947	Lmo0272 protein	Phosphatase yidA	Cof family protein	Putative uncharacterized protein	Putative haloacid dehalogenase-like hydrolase	Putative uncharacterized protein	Conserved protein, putative hydrolase	Putative uncharacterized protein	Putative uncharacterized protein yidA	Residues 1 to 270 of 270 are 100 pct identical to residues 1 to 270 of a 270 aa protein from Escherichia coli K12 ref: NP_418152.1 orf, conserved hypothetical protein	Hydrolase (HAD superfamily)	IPR000150: Cof protein putative hydrolase of the HAD superfamily	Putative uncharacterized protein gbs0557	identified by match to PFAM protein family HMM PF00702 hydrolase, haloacid dehalogenase-like family	Hydrolase, HAD superfamily	best blastp match gb|AAK33590.1| (AE006516) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] conserved hypothetical protein	Conserved hypothetical protein	Putative hydrolase of the HAD superfamily	identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG0561 conserved hypothetical protein	identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484 Cof-like hydrolase	hydrolase (HAD superfamily)	Code: R; COG: COG0561 conserved hypothetical protein	Hydrolase HAD superfamily	Hydrolase HAD superfamily	Code: R; COG: COG0561; orf conserved hypothetical protein	
ECOLI03579	Uncharacterized protein yidB	Hypothetical protein yidB	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yidB	hypothetical protein	Residues 1 to 135 of 135 are 97 pct identical to residues 1 to 135 of a 135 aa protein from Escherichia coli K12 ref: NP_418153.1 orf, conserved hypothetical protein	Protein of unknown function DUF937, bacterial	Code: S; COG: COG3753 conserved hypothetical protein	Code: S; COG: COG3753 conserved hypothetical protein	protein of unknown function DUF937	protein of unknown function DUF937	Code: S; COG: COG3753; orf conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein identified by match to protein family HMM PF06078	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein yidB	protein of unknown function DUF937 PFAM: protein of unknown function DUF937 KEGG: bur:Bcep18194_A5147 protein of unknown function DUF937	protein of unknown function DUF937	protein of unknown function DUF937 PFAM: protein of unknown function DUF937 KEGG: bcn:Bcen_6233 protein of unknown function DUF937	Putative uncharacterized protein	protein of unknown function DUF937 PFAM: protein of unknown function DUF937 KEGG: gme:Gmet_2744 protein of unknown function DUF937	Bacterial protein of unknown function (DUF937) family identified by match to protein family HMM PF06078	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG3753	
ECOLI03580	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit b	similar to GB:M54886, GB:J00207, GB:V00548, GB:I01595, GB:I01766, GB:A08449, GB:A04970, GB:M28028, GB:M29883, GB:S64979, GB:S64991, GB:S64994, GB:V00544, GB:V00549, SP:P01563, SP:P01570, PID:186499, PID:1927073, PID:22772, PID:22773, PID:32731, PID:32741, PID:32745, PID:386793, PID:386795, PID:490152, PID:553350, PID:553514, PID:758076, PID:825603, GB:M54886, GB:J00207, GB:V00548, GB:I01595, GB:I01766, GB:A08449, GB:A04970, GB:M28028, GB:M29883, GB:S64979, GB:S64991, GB:S64994, GB:V00544, GB:V00549, SP:P01563, SP:P01570, PID:186499, PID:1927073, PID:22772, PID:22773, PID:32731, PID:32741, PID:32745, PID:386793, PID:386795, PID:490152, PID:553350, PID:553514, PID:758076,  and PID:825603; identified by sequence similarity; putative DNA gyrase, subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	DNA gyrase subunit B	
ECOLI03581	DNA replication and repair protein recF	RECF protein	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	identified by match to PFAM protein family HMM PF03448 recF protein, putative	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	Recombination protein RecF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	RecF protein	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	DNA replication and repair protein recF	
ECOLI03582	DNA polymerase III subunit beta	DNA polymerase III, beta subunit	DNA polymerase III beta chain	DNA polymerase III subunit beta	DNA polymerase III beta chain	DNA polymerase III subunit beta	similar to GB:X69151, GB:J05682, SP:P21283, PID:340188,  and PID:37643; identified by sequence similarity; putative DNA polymerase III, beta subunit	DNA polymerase III, beta subunit	DNA polymerase III, beta chain	DNA polymerase III subunit beta	DNA polymerase III beta subunit	DNA polymerase III, beta chain	DNA-directed DNA polymerase III beta chain	DNA polymerase III, beta subunit	DNA polymerase III subunit beta	DNA polymerase III subunit beta	DNA polymerase III, beta subunit	DnaN	DNA polymerase III subunit beta	DNA polymerase III, beta chain	DNA polymerase III, beta subunit	DNA polymerase III, beta chain	DNA polymerase III, beta subunit	DNA polymerase III beta subunit	DNA polymerase III, beta chain	DNA polymerase III, beta chain	DNA polymerase III beta-subunit	DNA polymerase III beta subunit	Probable DNA polymerase III, beta chain	
ECOLI03583	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	identified by match to TIGR protein family HMM TIGR00362 chromosomal replication initiator protein DnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	Chromosomal replication initiator protein dnaA	
ECOLI03585	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	identified by match to PFAM protein family HMM PF00825 ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Putative RNase P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	Residues 1 to 119 of 119 are 99 pct identical to residues 1 to 119 of a 119 aa protein from Escherichia coli K12 ref: NP_418159.1 RNase P, protein component; protein C5; processes tRNA, 4.5S RNA	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	similar to ribonuclease P protein component (RNase P) hypothetical protein	similar to ribonuclease P protein component (RNase P) hypothetical protein	Ribonuclease P protein component	Ribonuclease P protein component	Ribonuclease P protein component	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ribonuclease P, protein component	
ECOLI03587	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Putative inner membrane protein, 60 kDa	Inner membrane protein oxaA	similar to GB:L02527, and PID:151713; identified by sequence similarity; putative inner-membrane protein, 60 kDa	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE INNER-MEMBRANE TRANSMEMBRANE PROTEIN	Membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein, 60 kDa	Inner membrane protein oxaA	Inner membrane protein oxaA	Inner membrane protein oxaA	unknown protein	
ECOLI03588	tRNA modification GTPase mnmE	conserved hypothetical protein;	Mitochondrial protein, forms a heterodimer complex with Mto1p that performs the 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; similar to human GTPBP3.  [Source:SGD;Acc:S000004625]	similar to sp|P32559 Saccharomyces cerevisiae YMR023c MSS1 mitochondrial GTPase involved in expression of COX1 singleton, hypothetical start	tRNA modification GTPase mnmE	tRNA modification GTPase mss1, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC222.05c]	similar to sp|P32559 Saccharomyces cerevisiae YMR023c MSS1 mitochondrial GTPase involved in expression of COX1 singleton, start by similarity	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	Probable tRNA modification GTPase trmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	similar to uniprot|P32559 Saccharomyces cerevisiae YMR023c MSS1 mitochondrial GTPase involved in expression of COX1;	DEHA2D18546p;similar to uniprot|P32559 Saccharomyces cerevisiae YMR023C MSS1 Mitochondrial protein required for respiration in paromomycin-resistant 15S rRNA mutants;	identified by match to PFAM protein family HMM PF03029 thiophene and furan oxidation protein ThdF	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	tRNA modification GTPase mnmE	
ECOLI03590	Tryptophanase	Tryptophanase	Tryptophanase	putative tryptophanase	Tryptophanase	tryptophanase	Tryptophanase	Beta-eliminating lyase	Tryptophanase	Tryptophanase	Putative tyrosine phenol-lyase	Tryptophanase	Residues 1 to 476 of 476 are 100 pct identical to residues 1 to 476 of a 476 aa protein from Escherichia coli K12 ref: NP_418164.1 tryptophanase	L-tryptophan indole-lyase; TNase; Similar to: TNAA_HAEIN tryptophanase	Tyrosine phenol-lyase	Tryptophanase	Tryptophanase	Tryptophanase	Tryptophanase	Tryptophanase	Tryptophanase	Tryptophanase	Tryptophanase PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase KEGG: rpd:RPD_3423 tryptophanase	tryptophanase Code: E; COG: COG3033	tryptophanase tryptophan deaminase, PLP-dependent	Tryptophanase 2	Tryptophanase	Putative uncharacterized protein	Tryptophanase	
ECOLI03591	Low affinity tryptophan permease	putative tryptophan-specific transport protein	Low affinity tryptophan permease	Low affinity tryptophan permease	Putative tyrosine-specific transport protein	Residues 1 to 415 of 415 are 99 pct identical to residues 1 to 415 of a 415 aa protein from Escherichia coli K12 ref: NP_418165.1 low affinity tryptophan permease	tryptophan-specific transport protein	Code: E; COG: COG0814 low affinity tryptophan permease	Code: E; COG: COG0814 low affinity tryptophan permease	Low affinity tryptophan permease	Low affinity tryptophan permease	HAAAP family transporter: tyrosine	low affinity tryptophan permease Code: E; COG: COG0814	low affinity tryptophan permease	Low affinity tryptophan permease	Tryptophan transporter of low affinity	Low affinity tryptophan permease	Aromatic amino acid transporter	Low affinity tryptophan permease TnaB	Low affinity tryptophan permease TnaB	Tryptophan transport protein	Tryptophan transporter of low affinity	Tryptophan transporter of low affinity	Tryptophan transporter of low affinity	Tryptophan-specific transport protein	Tryptophan transporter of low affinity	Tryptophan transporter of low affinity	Tryptophan transporter of low affinity	Tryptophan transporter of low affinity	
ECOLI03592	Multidrug resistance protein mdtL	Multidrug resistance protein mdtL	Multidrug resistance protein mdtL	Multidrug resistance protein mdtL	Multidrug resistance protein mdtL	Multidrug resistance protein mdtL	Residues 1 to 391 of 391 are 99 pct identical to residues 1 to 391 of a 391 aa protein from Escherichia coli K12 ref: NP_418166.1 putative transport protein	Putative efflux permease transmembrane protein	Multidrug transport protein	IPR007114: Major facilitator superfamily putative MFS family tranport protein (1st mdule)	similar to Salmonella typhi CT18 putative membrane transport protein putative membrane transport protein	Similar to AAO91456 Drug resistance transporter, Bcr/Cfl family from Coxiella burnetii (409 aa). FASTA: opt: 427 Z-score: 505.5 E(): 2.6e-20 Smith-Waterman score: 442; 29.966 identity in 297 aa overlap. Contains an in-frame stop codon after aa 57. Truncation at the C-terminal according to FASTA hits ORF ftt1618 pseudo major facilitator superfamily (MSF) transport protein, pseudogene	Multidrug resistance protein mdtL	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	D-lactate dehydrogenase, putative identified by match to protein family HMM PF07690	major facilitator superfamily MFS_1	Code: GEPR; COG: COG0477 putative transport protein	Multidrug resistance protein mdtL	pseudo major facilitator superfamily (MSF) transport protein, pseudogene Similar to AAO91456 Drug resistance transporter,Bcr/Cfl family from Coxiella burnetii (409 aa).  FASTA: opt: 427 Z-score: 505.5 E(): 2.6e-20 Smith-Waterman score: 442; 29.966 identity in 297 aa overlap. Contains an in-frame stop codon after aa 57. Truncation at the C-terminal according to FASTA hits ORF ftt1618	Multidrug resistance protein mdtL	transporter, major facilitator family protein identified by match to protein family HMM PF07690	Membrane transport protein	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: son:SO4021 transporter, putative	putative transport protein Code: GEPR; COG: COG0477	multidrug efflux system protein drug/chloramphenicol transport protein (MFS family)	Major facilitator superfamily MFS_1	Membrane protein, putative	Drug/chloramphenicol transport protein	
ECOLI03593	HTH-type transcriptional regulator yidZ	HTH-type transcriptional regulator yidZ	Transcriptional regulator, LysR family	Putative transcriptional regulator, LysR family	HTH-type transcriptional regulator yidZ	HTH-type transcriptional regulator phcA	similar to Salmonella typhi CT18 putative LysR-family transcriptional regulator putative LysR-family transcriptional regulator	HTH-type transcriptional regulator yidZ	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Putative transcriptional regulator, LysR family	Hypothetical transcriptional regulator YidZ	HTH-type transcriptional regulator YidZ identified by match to protein family HMM PF00126; match to protein family HMM PF03466	Transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein, LysR KEGG: son:SO4020 transcriptional regulator, LysR family	conserved hypothetical protein predicted DNA-binding transcriptional regulator	Transcriptional regulator, LysR family	Putative transcriptional regulator	Putative uncharacterized protein	HTH-type transcriptional regulator yidZ	Predicted DNA-binding transcriptional regulator	HTH-type transcriptional regulator yidZ	HTH-type transcriptional regulator yidZ	Transcriptional regulator, LysR family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Transcriptional regulator, LysR family	
ECOLI03594	Uncharacterized protein yieE	Hypothetical protein yieE	Putative membrane protein	Putative uncharacterized protein yieE	Residues 1 to 253 of 253 are 98 pct identical to residues 1 to 253 of a 253 aa protein from Escherichia coli K12 ref: NP_418168.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	Code: H; COG: COG2091 conserved hypothetical protein	Code: H; COG: COG2091 conserved hypothetical protein	Code: H; COG: COG2091; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yieE	conserved hypothetical protein Code: H; COG: COG2091	conserved hypothetical protein predicted phosphopantetheinyl transferase	Putative uncharacterized protein	Putative uncharacterized protein yieE	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted phosphopantetheinyl transferase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yieE	Putative uncharacterized protein	
ECOLI03595	Uncharacterized protein yieF	Putative uncharacterized protein	Putative uncharacterized protein	Putative reductase	Hypothetical FMN-reductase	Oxidoreductase, putative	Putative uncharacterized protein	Putative uncharacterized protein	NADPH-dependent FMN reductase	Putative uncharacterized protein	Putative uncharacterized protein	Putative oxidoreductase	Hypothetical protein yieF	Putative oxidoreductase	Putative chromate reductase	Putative chromate reductase	Putative chromate reductase	FMN reductase, NADPH-dependent	Putative chromate reductase	Putative reductase	NADPH-dependent FMN reductase domain protein	Putative uncharacterized protein	Uncharacterized protein yieF	CDS_ID OB1038 chromate reductase	Putative uncharacterized protein	NADPH-dependent FMN reductase	SC7A8.17c, possible reductase, len: 195 aa; similar to TR:Q9ZGD0 (EMBL:AF080235) Streptomyces cyanogenus reductase homolog LanO, 193 aa; fasta scores: opt: 780 z-score: 927.8 E(): 0; 60.1% identity in 188 aa overlap and to TR:AAF00220 (EMBL:AF164961) Streptomyces fradiae UrdO, 197 aa; fasta scores: opt: 775 z-score: 921.8 E(): 0; 55.7% identity in 194 aa overlap putative reductase	Residues 1 to 188 of 188 are 100 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290349.1 orf, conserved hypothetical protein	Putative flavoprotein	
ECOLI03596	Inner membrane protein yieG	Xanthine/uracil permease family protein	Vng2116c	Putative uncharacterized protein PH1162	Membrane protein, xanthine/uracil permease family	Putative uncharacterized protein PF0852	Xanthine/uracil permease family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane transport protein	putative transporter	Putative uncharacterized protein	Hypothetical protein yieG	Putative permease	Xanthine/uracil permease family protein	Putative membrane , transport protein	CDS_ID OB0723 hypothetical protein	similar to AE001862-181|AAF12190.1| percent identity: 36 in 472 aa conserved hypothetical protein	BH0608 protein	Residues 1 to 432 of 432 are 99 pct identical to residues 14 to 445 of a 445 aa protein from Escherichia coli gb: AAA62065.1 f445	Xanthine/uracil permeases family protein	xanthine/uracilpermease	Simlar to permease	identified by match to protein family HMM PF00860 xanthine/uracil permease family protein	Hypothetical protein SE1827	guanine-hypoxyanthine permiase; Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) Xanthine/uracil/vitamin C permease family	IPR002040: Tachykinin/Neurokinin; IPR006043: Xanthine/uracil/vitamin C permease family putative xanthine/uracil permeases family	similar to Salmonella typhi CT18 putative membrane transport protein putative membrane transport protein	conserved hypothetical protein	
ECOLI03597	Phosphatase yieH	Hydrolase	Putative hydrolase	CbbY family protein	Putative uncharacterized protein	Putative hydrolase	putative phosphatase/phosphohexomutase	Hypothetical protein yieH	similar to GP:15155768; identified by sequence similarity; putative hydrolase, haloacid dehalogenase-like family	CbbY family protein	Putative haloacid dehalogenase-like hydrolase	PHOSPHOGLYCOLATE PHOSPHATASE	CbbY family protein	Putative phosphatase	hypothetical protein	Possible hydrolases/phosphatases	Beta-phosphoglucomutase, putative	SCE68.31c, possible hydrolase, len: 215 aa; similar to many e.g. TR:O68118 (EMBL:AF010496) Rhodobacter capsulatus hypothetical protein (225 aa), fasta scores; opt: 456 z-score: 540.0 E(): 9.4e-23, 38.5% identity in 221 aa overlap. Weakly similar to SW:GPH_RHOCA (EMBL:U23145), cbbZ, Rhodobacter capsulatus phosphoglycolate phosphatase (219 aa) (24.0% identity in 217 aa overlap). Contains Pfam match to entry PF00702 Hydrolase, haloacid dehalogenase-like hydrolase putative hydrolase	Predicted phosphatase/phosphohexomutase	Phosphatase	Residues 1 to 218 of 218 are 98 pct identical to residues 1 to 221 of a 221 aa protein from Escherichia coli K12 ref: NP_418171.1 putative phosphatase	Putative haloacid dehalogenase-like hydrolase	hypothetical protein	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549 HAD-superfamily hydrolase, subfamily IA, variant 1	Hydrolase phosphatase protein	IPR005833: Haloacid dehalogenase/epoxide hydrolase putative phosphatase/phosphohexomutase	similar to Salmonella typhi CT18 putative hydrolase putative hydrolase	similar to BR0489, hydrolase, haloacid dehalogenase-like family hydrolase, haloacid dehalogenase-like family	Putative uncharacterized protein gbs0328	
ECOLI03598	Inner membrane protein cbrB	Residues 1 to 157 of 157 are 96 pct identical to residues 1 to 155 of a 155 aa protein from Escherichia coli K12 ref: NP_418172.1 orf, conserved hypothetical protein	conserved hypothetical protein	Inner membrane protein cbrB	Inner membrane protein cbrB	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein yieI	Putative uncharacterized protein yieI	Putative uncharacterized protein yieI	Predicted inner membrane protein	Putative uncharacterized protein yieI	YieI protein	Predicted inner membrane protein	predicted inner membrane protein	Inner membrane protein	
ECOLI03599	UPF0167 protein cbrC	UPF0167 protein PA1536	Putative uncharacterized protein	UPF0167 protein Rv2295/MT2352	Mb2317, -, len: 212 aa. Equivalent to Rv2295, len: 212 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 212 aa overlap). Conserved hypothetical protein, cysteine-rich protein, similar to YIEJ_ECOLI P31469 hypothetical 22.5 kd protein in tnab-bglb intergenic region (195 aa), opt: 270, E(): 3.4e-11, (36.4% identity in 198 aa overlap). Alternative start suggested by similarity 26 codons further downstream CONSERVED HYPOTHETICAL PROTEIN	protein of unknown function UPF0167	conserved hypothetical protein	conserved hypothetical protein Mapped to H37Rv Rv2295	Hypothetical protein BCG_2311	protein of unknown function UPF0167 PFAM: protein of unknown function UPF0167 KEGG: son:SO0898 hypothetical protein	conserved hypothetical protein	conserved hypothetical protein Code: S; COG: COG3196	protein of unknown function UPF0167 PFAM: protein of unknown function UPF0167 KEGG: son:SO0898 hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein cbrC	UPF0167 protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein cbrC	Putative uncharacterized protein	Putative uncharacterized protein cbrC	
ECOLI03600	Uncharacterized protein yieK	Lmo2721 protein	Hypothetical protein yieK	N-acetylglucosamine-6-phosphate isomerase	Lin2869 protein	Residues 1 to 232 of 240 are 100 pct identical to residues 1 to 232 of a 236 aa protein YIEK_ECOLI sp: P31470 orf, conserved hypothetical protein	Putative uncharacterized protein ytgG	identified by similarity to SP:O35000; match to protein family HMM PF01182 glucosamine-6-phosphate isomerase, putative	Putative uncharacterized protein	Putative uncharacterized protein yieK	Glucosamine-6-phosphate isomerase	Glucosamine-6-phosphate isomerase/deaminase	putative isomerase Code: G; COG: COG0363	conserved hypothetical protein isomerase-like	Putative uncharacterized protein yieK	Glucosamine-6-phosphate isomerase/6- phosphogluconolactonase	Predicted 6-phosphogluconolactonase	Glucosamine-6-phosphate isomerase/6- phosphogluconolactonase	Glucosamine/galactosamine-6-phosphate isomerase	Putative glucosamine-6-phosphate isomerase	Putative uncharacterized protein	Putative glucosamine-6-phosphate isomerase	Putative 6-phosphogluconolactonase	Putative 6-phosphogluconolactonase	Putative 6-phosphogluconolactonase	Putative glucosamine-6-phosphate isomerase	pseudo	Putative 6-phosphogluconolactonase	YieK protein	
ECOLI03601	Uncharacterized protein yieL	Putative glycosyl hydrolase exoenzyme	Residues 1 to 397 of 402 are 98 pct identical to residues 1 to 397 of a 400 aa protein from Escherichia coli K12 ref: NP_418175.1 putative xylanase	Enterochelin esterase	LmjF20.1170, predicted protein, len = 324 aa, possibly endo-1,4-beta-xylanase z precursor; predicted pI = 4.9879; reasonable similarity to XYNZ_CLOTM, endo-1,4-beta-xylanase z precursor in Clostridium thermocellum; contains a putative esterase pfam domain; contains a stop codon, possible pseudogene or sequencing error pseudo endo-1,4-beta-xylanase z precursor-like protein	Putative uncharacterized protein	Putative xylanase	putative xylanase Code: P; COG: COG2382	putative xylanase	Putative xylanase	Putative xylanase	Putative esterase	Predicted xylanase	Glycoside hydrolase family 13 domain protein precursor	Putative uncharacterized protein	Putative esterase	Putative esterase	Putative uncharacterized protein	Putative xylanase	Putative xylanase	Putative xylanase	Predicted xylanase	Putative xylanase	Putative esterase	Enterochelin esterase-like enzyme	YieL protein	Putative esterase	Glycoside hydrolase family 13 domain protein	Putative esterase	
ECOLI03602	Cryptic outer membrane porin bglH	Putative outer membrane protein yieC	Residues 1 to 538 of 538 are 98 pct identical to residues 1 to 538 of a 538 aa protein from Escherichia coli K12 ref: NP_418176.1 putative receptor protein	outer membrane protein S	Code: G; COG: COG4580 putative receptor protein	Putative outer membrane porin bglH	Putative outer membrane porin bglH	putative receptor protein Code: G; COG: COG4580	carbohydrate-specific outer membrane porin, cryptic	Carbohydrate-specific outer membrane porin in cryptic operon	Glucoside specific outer membrane porin BglH	Carbohydrate-specific outer membrane porin, cryptic	Glucoside specific outer membrane porin BglH	Porin LamB type precursor	Outer membrane protein S	Putative outer membrane porin	Maltoporin	Putative uncharacterized protein	Carbohydrate-specific outer membrane porin, cryptic	Carbohydrate-specific outer membrane porin, cryptic	Carbohydrate-specific outer membrane porin, cryptic	Carbohydrate-specific outer membrane porin, cryptic	Carbohydrate-specific outer membrane porin, cryptic	BglH protein	Porin LamB type	Porin LamB type	Carbohydrate-specific outer membrane porin, cryptic	Porin LamB type	carbohydrate-specific outer membrane porin in cryptic operon; putative receptor protein	
ECOLI03603	6-phospho-beta-glucosidase bglB	6-phospho-beta-glucosidase bglB	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	Putative 6-phospho-beta-glucosidase	Beta-glucosidase	Putative beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase B	6-phospho-beta-glucosidase	BglH similar to phospho-beta-glucosidase beta-glucosidase	Putative uncharacterized protein gbs0811	identified by match to PFAM protein family HMM PF00232 6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	best blastp match gb|AAK33558.1| (AE006513) beta-glucosidase [Streptococcus pyogenes M1 GAS] putative beta-glucosidase	6-phospho-beta-glucosidase	identified by match to protein family HMM PF00232 glycosyl hydrolase, family 1	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase	6-phospho-beta-glucosidase BglB	6-phospho-beta-glucosidase BglB	6-phospho-beta-glucosidase	Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase	Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase	Hypothetical protein	phospho-beta-glucosidase B; cryptic Code: G; COG: COG2723	
ECOLI03604	PTS system beta-glucoside-specific EIIBCA component	PTS system, beta-glucoside-specific IIABC component	PTS system, beta-glucoside-specific IIABC component	Lin0026 protein	Residues 26 to 650 of 650 are 98 pct identical to residues 1 to 625 of a 625 aa protein from Escherichia coli K12 ref: NP_418178.1 PTS system beta-glucosides, enzyme II, cryptic	Beta-glucoside-specific phosphotransferase system -dependent permease	identified by similarity to SP:P08722; match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830 PTS system, beta-glucoside-specific, IIABC component	Code: G; COG: COG1263 PTS system beta-glucoside-specific, enzyme II, cryptic	PTS system, beta-glucoside-specific IIABC component	PTS system, beta-glucoside-specific IIABC component	Trehalose PTS trehalose component IIBC	Putative PTS-system permease	PTS system, IIabc component	Complete genome	Hypothetical protein	PTS system beta-glucosides, enzyme II, cryptic	PTS system, beta-glucoside-specific IIABC component	PTS system, beta-glucoside-specific IIABC subunit	Putative cellobiose-specific PTS permease	PTS system, beta-glucoside-specific IIABC component	PTS system, beta-glucoside-specific IIABC subunit	Fused beta-glucoside-specific PTS enzymes: IIA component; IIB component; IIC component	PTS system, beta-glucoside-specific IIABC component	PTS system, beta-glucoside-specific IIABC subunit	Phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific	PTS system, beta-glucoside-specific EIIBCA component	PTS system beta-glucoside-specific IIABC components	Pts system beta-glucoside-specific eiibca component	Fused beta-glucoside-specific PTS enzymes: IIA component ; IIB component ; IIC component	
ECOLI03605	Cryptic beta-glucoside bgl operon antiterminator	Putative uncharacterized protein Cgl2841	Probable transcription antiterminator, BglG family	Cryptic beta-glucoside bgl operon Antiterminator	Beta-glucoside operon antiterminator	Conserved protein	Putative transcriptional antiterminator LicT	Putative uncharacterized protein	Residues 1 to 273 of 273 are 97 pct identical to residues 1 to 278 of a 278 aa protein from Escherichia coli K12 ref: NP_418179.1 positive regulation of bgl operon	InterProMatches:IPR004341, BglG family; required for substrate-dependent induction and catabolite repression of bglPH,Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355) transcriptional antiterminator	transcriptional antiterminator, BglG family	Beta-glucoside operon antiterminator	Putative uncharacterized protein gbs0809	identified by match to PFAM protein family HMM PF00874 transcriptional antiterminator LicT	identified by similarity to SP:P39805; match to protein family HMM PF00874; match to protein family HMM PF03123 transcription antiterminator LicT	transcriptional antiterminators, BglG family	identified by match to protein family HMM PF00874; match to protein family HMM PF03123 transcriptional antiterminator, BglG family	Code: K; COG: COG3711 positive regulation of bgl operon	Transcription antiterminator, BglG family	Cryptic beta-glucoside bgl operon antiterminator	Cryptic beta-glucoside bgl operon Antiterminator	beta-glucoside operon antiterminator	Transcriptional antiterminator, BglG family, putative	Transcriptional antiterminator	positive regulation of bgl operon Code: K; COG: COG3711	Transcriptional antiterminator	transcriptional antiterminator of the bgl operon	Transcriptional antiterminator, BglG	Beta-glucoside operon antiterminator	
ECOLI03606	Phosphate transport system protein phoU	Phosphate transport system protein phoU homolog	Phosphate transport system regulatory protein PhoU	Phosphate transport system protein phoU homolog	Putative transcriptional regulator, phosphate uptake regulation	Phosphate transport system regulatory protein	Putative phosphate transport system regulatory protein	Phosphate transport system protein phoU homolog	Phosphate ABC transporter, regulatory protein	Probable phosphate transport system regulator	PhoU family protein	Phosphate transport system protein phoU	Phosphate transport system protein phoU	Phosphate uptake regulator	Phosphate transport system protein phoU homolog	Phosphate transport system protein phoU	Phosphate transport system regulatory protein	Phosphate transport system regulatory protein	Phosphate regulon transcriptional regulator	Putative phosphate transport system regulatory protein PhoU	Related to phosphate transport system regulatory protein PhoU	Lmo2494 protein	Putative transcriptional regulator for phosphate uptake	Phosphate transport system protein phoU	Phosphate transport system regulatory protein PhoU	Phosphate transport system-related protein	Phosphate transport system protein phoU homolog	Phosphate transport system regulatory protein	Phosphate transport system protein phoU	
ECOLI03607	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB 2	PMID: 96337999 PMID: 8688087 best DB hits: BLAST: swissprot:Q58418; PSTB_METJA PROBABLE PHOSPHATE TRANSPORT; E=2e-84 swissprot:P07655; PSTB_ECOLI PHOSPHATE TRANSPORT ATP-BINDING; E=3e-82 ddbj:BAA22864.1; (D89963) peripheral membrane protein; E=6e-81 COG: MJ1012; COG1117 ABC-type phosphate transport system, ATPase; E=2e-85 pstB; COG1117 ABC-type phosphate transport system, ATPase component; E=3e-83 PA5366; COG1117 ABC-type phosphate transport system, ATPase; E=7e-82 PFAM: PF00005; ABC transporter; E=3.1e-55 probable phosphate transport ATP-binding protein PSTB	Phosphate import ATP-binding protein pstB 1	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	pseudo	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Residues 1 to 257 of 257 are 100 pct identical to residues 1 to 257 of a 257 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290357.1 ATP-binding component of high-affinity phosphate-specific transport system	Phosphate import ATP-binding protein pstB 2	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate import ATP-binding protein pstB	Phosphate ABC transporter, ATP-binding protein	Phosphate import ATP-binding protein pstB 1	phosphate ABC transporter ATP-binding protein	
ECOLI03608	Phosphate transport system permease protein pstA	Phosphate ABC transporter, permease protein	Phosphate transport system permease protein	Phosphate transport system permease protein pstA	Phosphate ABC transporter, permease protein	Phosphate transport system permease protein; PstA	ABC transporter phosphate permease	Phosphate ABC transporter, permease protein	Phosphate transport system permease protein pstA	Putative ABC transporter permease protein	Putative phosphate ABC transporter permease protein	Probable phosphate binding-protein of ABC transporter system	Phosphate transport system permease PstA	Binding-protein-dependent transport systems inner membrane component	PstA phosphate ABC transporter, permease protein	Phosphate transport system permease psta	Probable phosphate ABC transporter	Phosphate ABC transporter, permease protein	Phosphate transport system permease protein pstA	ABC-type phosphate transport system, permease component	Phosphate ABC transporter, permease protein	Phosphate transport system permease protein	Putative phosphate ABC transporter, permease protein	Related to phosphate ABC-transporter, permease protein	Lmo2497 protein	ABC-type transporter, permease components	Phosphate transport system permease protein pstA	Putative ABC transporter permease protein	Phosphate transport system permease protein pstA	
ECOLI03609	Phosphate transport system permease protein pstC	Probable phosphate transport system permease protein pstC	Phosphate ABC transporter, permease protein	Phosphate transport system permease protein	Phosphate transport system permease protein pstC	Phosphate ABC transporter, permease protein	ABC transporter phosphate permease	Phosphate ABC transporter, permease protein	Phosphate transport system permease protein pstC	Phosphate transporter permease	Phosphate transporter permease PstC	Putative phosphate ABC transporter permease protein	Phosphate transport system permease protein C	Putative phosphate ABC transporter	PstC phosphate ABC transporter, permease protein	Putative phosphate transport system permease protein C	Putative phosphate ABC transporter	Phosphate transport system permease protein pstC	Phosphate ABC transporter, permease protein	Phosphate transport system permease protein	Putative phosphate ABC transporter, permease protein	Lmo2498 protein	ABC-type transporter, permease components	Phosphate transport system permease protein pstC	Phosphate transport system permease protein pstC	Phosphate ABC transporter, permease	Phosphate transport system permease protein	putative phosphate ABC transporter, permease protein	Phosphate ABC transporter, permease protein	
ECOLI03610	Phosphate-binding protein pstS	Phosphate-binding protein pstS	Phosphate-binding periplasmic protein, putative	Phosphate binding periplasmic protein	Periplasmic phosphate binding protein	Phosphate binding protein	Phosphate ABC transporter, phosphate binding protein	Phosphate-binding protein pstS	Phosphate-binding periplasmic protein, putative ABC transporter	Putative phosphate ABC transporter substrate- binding protein	Phosphate-binding periplasmic protein	ABC transporter, substrate binding protein, phosphate	PstS phosphate ABC transporter, periplasmic phosphate-binding protein	Phosphate-binding periplasmic protein	ABC transporter, substrate binding protein, phosphate	Phosphate-binding protein pstS	Periplasmic phosphate-binding protein	ABC phosphate transport system phosphate-binding periplasmic protein	Phosphate transport system, substrate-binding exported periplasmic protein	Phosphate-binding periplasmic protein	Phosphate-binding periplasmic protein	Phosphate-binding periplasmic protein	Phosphate-binding periplasmic protein	Phosphate ABC transporter, periplasmic phosphate- binding protein	Phosphate-binding periplasmic protein	PHOSPHATE-BINDING PERIPLASMIC PROTEIN	phosphate ABC transporter periplasmic phosphate-binding protein	Putative phosphate transporter phosphate-binding protein	Phosphate ABC transporter, periplasmic phosphate- binding protein	
ECOLI03611	Glucosamine--fructose-6-phosphate aminotransferase	glucosamine-fructose-6-phosphate aminotransferase;	Glutamine-fructose-6-phosphate amidotransferase, catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis. [Source:SGD;Acc:S000001587]	highly similar to sp|P14742 Saccharomyces cerevisiae Glucosamine--fructose-6-phosphate aminotransferase, hypothetical start	Glucosamine--fructose-6-phosphate aminotransferase	Probable glucosamine--fructose-6-phosphate aminotransferase [isomerizing] [Source:GeneDB_Spombe;Acc:SPBC12C2.11]	highly similar to sp|P14742 Saccharomyces cerevisiae YKL104c GFA1 glucosamine--fructose-6-phosphate transaminase, start by similarity	Glucosamine--fructose-6-phosphate aminotransferase	Glucosamine--fructose-6-phosphate aminotransferase	Glutamine-fructose-6-phosphate transaminase	Glucosamine--fructose-6-phosphate aminotransferase	glucosamine--fructose-6-phosphate aminotransferase, putative	Glucosamine--fructose-6-phosphate aminotransferase	Glucosamine--fructose-6-phosphate aminotransferase	GLUCOSAMINE FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE;07_1280, GLUCOSAMINE FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, GFA2_HUMAN, gene found by Glimmer;	Glucosamine--fructose-6-phosphate aminotransferase	Glucosamine--fructose-6-phosphate aminotransferase	highly similar to uniprot|P14742 Saccharomyces cerevisiae YKL104c GFA1 Glucosamine--fructose-6-phosphate aminotransferase;	Glucosamine--fructose-6-phosphate aminotransferase	DEHA2G02222p;highly similar to uniprot|P14742 Saccharomyces cerevisiae YKL104C GFA1 Glutamine-fructose-6-phosphate amidotransferase,;	Glucosamine--fructose-6-phosphate aminotransferase	similar to GB:S69377, GB:M81078, SP:P12980,  and PID:292708; identified by sequence similarity; putative glucosamine--fructose-6-phosphate aminotransferase (isomerizing)	GlmS	Glutamine--fructose-6-phosphate transaminase	hypothetical glucosamine--fructose-6-phosphate aminotransferase	Glutamine--fructose-6-phosphate transaminase	Glucosamine--fructose-6-phosphate aminotransferase	Glucosamine--fructose-6-phosphate aminotransferase, isomerizing	Glucosamine--fructose-6-phosphate aminotransferase	
ECOLI03612	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Sugar phosphate nucleotydyl transferase	Bifunctional protein glmU	Glucose-1-phosphate thymidylyltransferase	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase homolog	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis; translation initiation factor eIF2B subunit	419aa long hypothetical glucose-1-phosphate thymidylyltransferase	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Nucleotidyltransferase	Glucose-1-phosphate thymidylyltransferase	hypothetical glucose-1-phosphate thymidylyltransferase	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	Bifunctional protein glmU	
ECOLI03613	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	DEHA2A14014p;similar to uniprot|Q12165 Saccharomyces cerevisiae YDL004W ATP16 Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase;	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	ATP synthase epsilon chain	Putative AtpC, ATP synthase F1, epsilon subunit	
ECOLI03614	ATP synthase subunit beta	ATP synthase beta chain, mitochondrial precursor;	Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; phosphorylated.  [Source:SGD;Acc:S000003882]	highly similar to sp|P49376 Kluyveromyces lactis ATP synthase beta chain mitochondrial precursor (EC 3.6.3. 14), hypothetical start	ATP synthase subunit beta	ATP synthase subunit beta, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC222.12c]	gi|1703697|sp|P49376|ATPB_KLULA Kluyveromyces lactis ATP synthase beta chain, mitochondrial precursor, start by similarity	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	highly similar to uniprot|P00830 Saccharomyces cerevisiae YJR121w ATP2;	DEHA2F06226p;highly similar to uniprot|P00830 Saccharomyces cerevisiae YJR121W ATP2 subunit of mitochondrial F1F0 ATP synthase;	ATP synthase subunit beta	ATP synthase subunit beta 2	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	ATP synthase subunit beta	
ECOLI03615	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	ATP synthase gamma chain	
ECOLI03616	ATP synthase subunit alpha	ATP synthase alpha chain, mitochondrial precursor;	Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; phosphorylated.  [Source:SGD;Acc:S000000195]	highly similar to sp|P07251 Saccharomyces cerevisiae YBL099w ATP1 F1F0-ATPase complex, F1 alpha subunit, hypothetical start	ATP synthase subunit alpha	ATP synthase subunit alpha, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC14C4.14]	gi|1352026|sp|P49375|ATPA_KLULA Kluyveromyces lactis ATP synthase alpha chain, mitochondrial precursor, start by similarity	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	highly similar to uniprot|P07251 Saccharomyces cerevisiae YBL099w F1F0-ATPase complex;	DEHA2D13398p;highly similar to uniprot|P07251 Saccharomyces cerevisiae YBL099W ATP1 Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase;	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	ATP synthase subunit alpha	
ECOLI03617	ATP synthase delta chain	ATP synthase subunit delta	gi|27734218|sp|O74190|ATPO_KLULA Kluyveromyces lactis ATP synthase oligomycin sensitivity conferral protein, mitochondrial precursor (OSCP) (ATP synthase chain 5), start by similarity	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	DEHA2E05500p;similar to uniprot|P09457 Saccharomyces cerevisiae YDR298C ATP5 Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase which is a large evolutionarily conserved enzyme complex required for ATP synthesis;	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase delta chain	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	ATP synthase subunit delta	
ECOLI03618	ATP synthase B chain	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase B chain precursor	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase F0 subunit b	Putative ATP synthase subunit B'	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase B chain	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	ATP synthase subunit b	Putative AtpF, ATP synthase F0, B subunit	
ECOLI03619	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	putative ATP synthase subunit C	ATP synthase C chain	identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260 ATP synthase F0, C subunit	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	F0F1-type ATP synthaseC chain	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	CDS_ID OB2980 H(+)-transporting ATP synthase C chain	similar to AB048368-3|BAB13355.1| percent identity: 86 in 80 aa H+-ATPase c subunit	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	ATP synthase subunit c	
ECOLI03620	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a 2	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase A chain	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	ATP synthase A chain	ATP synthase subunit a	identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131 ATP synthase F0, A subunit	ATP synthase subunit a	ATP synthase subunit a	ATP synthase subunit a	
ECOLI03621	ATP synthase protein I	ATP synthase protein I	Putative ATP synthase protein I	ATP synthase protein I	ATP synthase protein I	ATP synthase protein I	ATP synthase protein I	ATP synthase protein I	Membrane-bound ATP synthase, dispensable protein, affects expression of atpB	ATP synthase protein I	Residues 1 to 130 of 130 are 99 pct identical to residues 1 to 130 of a 130 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290378.1 membrane-bound ATP synthase, dispensable protein, affects expression of atpB	ATP synthase protein I	ATP synthase protein I	IPR005598: ATP synthase I chain membrane-bound ATP synthase subunit, F1-F0-type proton-ATPase	similar to Salmonella typhi CT18 ATP synthase protein I. ATP synthase protein I.	ATP synthase protein I	ATP synthase protein I	F0F1-type ATP synthase, subunit I	Membrane-bound ATP synthase subunit, F1-F0-type proton-ATPase	dispensable protein; affects expression of atpB; Code: C; COG: COG3312 membrane-bound ATP synthase	membrane-bound ATP synthase, dispensable protein, affects expression of atpB; Code: C; COG: COG3312 AtpI	ATP synthase subunit I	dispensable protein; affects expression of atpB; Code: C; COG: COG3312 membrane-bound ATP synthase	ATP synthase protein I	ATP synthase I chain precursor	ATP synthase I chain precursor	ATP synthase protein I	ATP synthase I chain	Membrane-bound ATP synthase F0 sector subunit I, dispensable protein, affects expression of atpB	
ECOLI03622	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Methyltransferase gidB	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	Ribosomal RNA small subunit methyltransferase G	
ECOLI03623	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	Mitochondrial protein, forms a heterodimer complex with Mss1p that performs the 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; required for respiration in paromomycin-resistant 15S rRNA mutants. [Source:SGD;Acc:S000003205]	similar to sp|P53070 Saccharomyces cerevisiae YGL236c MTO1, hypothetical start	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	Protein MTO1 homolog, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC30B4.06c]	similar to sp|P53070 Saccharomyces cerevisiae YGL236c MTO1 singleton, start by similarity	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG 2	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	DEHA2F26290p;similar to uniprot|P53070 Saccharomyces cerevisiae YGL236C MTO1 Mitochondrial protein required for respiration in paromomycin-resistant 15S rRNA mutants;	identified by match to TIGR protein family HMM TIGR01816 glucose inhibited division protein A	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG	
ECOLI03624	Protein mioC	Protein mioC homolog	MioC protein	MioC protein	Hypothetical MioC homolog	Protein mioC	Flavodoxin	Protein mioC homolog	MioC protein	Putative flavoprotein	Putative flavodoxin	MioC protein	Protein mioC	Putative uncharacterized protein	MioC protein	Residues 1 to 147 of 147 are 98 pct identical to residues 1 to 147 of a 147 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290381.1 initiation of chromosome replication	Putative flavoprotein	Protein mioC, involved in modulation of initiation at oriC, initiation of chromosome replication	flavodoxin	Flavodoxin	IPR001094: Flavodoxin-like domain; IPR008254: Flavodoxin/nitric oxide synthase initiation of chromosome replication	similar to Salmonella typhi CT18 MioC protein MioC protein	Putative uncharacterized protein gbs0584	identified by match to PFAM protein family HMM PF00258 flavodoxin	Putative flavoprotein	Putative Flavodoxin	protein MioC	Similar to: HI0669, MIOC_HAEIN MioC	Flavodoxins FldA protein	
ECOLI03625	Regulatory protein asnC	Transcriptional regulatory protein, AsnC family	Regulatory protein asnC	Transcription regulator	Leucine-responsive regulatory protein	NEQ229	Transcriptional regulator	Transcription regulator LrpA related protein	Putative HTH-type transcriptional regulator PYRAB06490	Uncharacterized HTH-type transcriptional regulator PF1543	hypothetical transcriptional regulator	Transcriptional regulatory protein, AsnC family	Probable transcriptional regulator	AsnC	Transcriptional regulator	Regulatory protein	Transcriptional regulator	putative transcriptional regulator AsnC	Regulatory protein asnC	Transcriptional regulator AsnC	Regulatory protein AsnC	AsnC-family transcriptional regulator	Regulatory protein asnC	AsnC family transcriptional regulatory protein	Putative transcriptional regulator	Transcriptional regulator AsnC	Regulatory protein asnC	transcriptional regulator	Transcriptional regulator, Lrp family	
ECOLI03626	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	identified by match to protein family HMM PF03590; match to protein family HMM TIGR00669 aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Residues 1 to 330 of 330 are 99 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290383.1 asparagine synthetase A	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	Aspartate--ammonia ligase	asparagine synthetase A	
ECOLI03627	Protein viaA	Putative uncharacterized protein VVA0564	Protein viaA	hypothetical protein	Protein viaA	Putative uncharacterized protein VCA0762	Protein viaA	Putative uncharacterized protein VPA1008	Protein viaA	Uncharacterized protein containing a von Willebrand factor type A (VWA) domain	Residues 1 to 483 of 483 are 99 pct identical to residues 1 to 483 of a 483 aa protein from Escherichia coli O157:H7 ref: NP_312714.1 orf, conserved hypothetical protein	Protein viaA	Protein viaA	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Protein viaA	hypothetical protein	Protein viaA	Code: R; COG: COG2425 conserved hypothetical protein	Code: R; COG: COG2425 conserved hypothetical protein	Code: R; COG: COG2425; orf conserved hypothetical protein	Protein viaA	Hypothetical protein	Protein viaA	Hypothetical protein	VWA domain containing CoxE-like family protein identified by match to protein family HMM PF05762	Hypothetical protein	Von Willebrand factor type A domain protein	Uncharacterized protein containing a von Willebrand factor type A (VWA) domain	
ECOLI03628	ATPase ravA	ATPase ravA	ATPase ravA	ATPase ravA	Residues 1 to 506 of 506 are 99 pct identical to residues 1 to 506 of a 506 aa protein from Escherichia coli K12 ref: NP_418202.1 putative 2-component regulator	ATPase ravA	ATPase ravA	paral putative regulator protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	ATPase ravA	ATPase ravA	Code: R; COG: COG0714 putative 2-component regulator	Code: R; COG: COG0714 putative 2-component regulator	Code: R; COG: COG0714 putative 2-component regulator	ATPase ravA	Hypothetical protein	ATPase ravA	Hypothetical protein	Hypothetical protein	putative 2-component regulator Code: R; COG: COG0714	Hypothetical protein	fused predicted transcriptional regulator: sigma54 activator protein	ATPase associated with various cellular activities, AAA_5	Putative 2-component regulator	Putative uncharacterized protein	ATPase ravA	ATPase associated with various cellular activities AAA_5	ATPase ravA	ATPase family associated with various cellular activities	
ECOLI03629	Low affinity potassium transport system protein kup	Probable potassium transport system protein kup 1	Probable potassium transport system protein kup	Probable potassium transport system protein kup	Probable potassium transport system protein kup	Probable potassium transport system protein kup	Low affinity potassium transport system protein kup	Probable potassium transport system protein kup	Probable potassium transport system protein kup	Low affinity potassium transport system protein kup	Probable potassium transport system protein kup	Probable potassium transport system protein kup	Low affinity potassium transport system protein kup	Probable potassium transport system protein kup	Probable potassium transport system protein kup	Probable potassium transport system protein kup	Probable potassium transport system protein kup	Low affinity potassium transport system protein kup	Probable potassium transport system protein kup 1	Probable potassium transport system protein kup 1	Residues 1 to 622 of 622 are 99 pct identical to residues 1 to 622 of a 622 aa protein KUP_ECOLI sp: P30016 KUP system potassium uptake protein	Low affinity potassium transport system protein kup	Low affinity potassium transport system protein kup	Probable potassium transport system protein kup 1	Kup system potassium uptake protein	Probable potassium transport system protein kup 2	Probable potassium transport system protein kup	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark potassium uptake protein	COG3158 K+ transporter K+ uptake protein	
ECOLI03630	D-ribose pyranase	D-ribose pyranase	D-ribose pyranase	D-ribose pyranase	D-ribose pyranase	D-ribose pyranase	ABC-type ribose transport system, auxiliary component	D-ribose pyranase	D-ribose pyranase	D-ribose pyranase	D-ribose pyranase	D-ribose pyranase	Hypothetical ribose ABC transporter protein	High affinity ribose transport protein rbsD	identified by match to protein family HMM PF05025 ribose ABC transporter protein	D-ribose pyranase	D-ribose pyranase	D-ribose pyranase	PMID: 93315143 PMID: 86224050 best DB hits: BLAST: pir:H82496; ribose ABC transporter protein VCA0127 [imported] -; E=3e-30 swissprot:P44734; RBSD_HAEIN HIGH AFFINITY RIBOSE TRANSPORT; E=5e-30 gb:AAK02240.1; (AE006050) RbsD [Pasteurella multocida]; E=5e-28 COG: VCA0127; COG1869 Uncharacterized components of ribose/xylose; E=3e-31 rbsD; COG1869 Uncharacterized components of ribose/xylose transport; E=9e-29 TM0959; COG1869 Uncharacterized components of ribose/xylose; E=3e-23 high affinity ribose transport protein rbsD	D-ribose pyranase	D-ribose pyranase	ribose ABC transporter (permease)	D-ribose pyranase	D-ribose pyranase	D-ribose pyranase	CDS_ID OB2575 ribose ABC transporter permease	HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD	D-ribose pyranase	D-ribose pyranase	
ECOLI03631	Ribose import ATP-binding protein rbsA	Ribose import ATP-binding protein rbsA 1	Ribose import ATP-binding protein rbsA 2	Ribose import ATP-binding protein rbsA	Ribose import ATP-binding protein rbsA	Ribose import ATP-binding protein rbsA	Ribose import ATP-binding protein rbsA	Putative ribose ABC transporter	Ribose import ATP-binding protein rbsA	identified by match to protein family HMM PF00005 ribose ABC transporter, ATP-binding protein	Ribose import ATP-binding protein rbsA	Ribose import ATP-binding protein rbsA	Product confidence : putative Gene name confidence : hypothetical putative sugar uptake ABC transporter ATP-binding protein	Ribose import ATP-binding protein rbsA	Ribose import ATP-binding protein rbsA 1	CDS_ID OB2574 ribose ABC transporter ATP-binding protein	SCC57A.17, ABC transporter protein, ATP binding component, len: 517 aa. Highly similar to many including: Escherichia coli SW:RBSA_ECOLI(EMBL:M13169) ribose transport ATP-binding protein RbsA (501 aa), fasta scores opt: 1421 z-score: 1446.1 E(): 0 47.5% identity in 493 aa overlap and Streptomyces coelicolor TR:O69942(EMBL:AL023862) ABC transporter ATP binding protein SC3F9.02 (505 aa), fasta scores opt: 1495 z-score: 1521.0 E(): 0 50.2% identity in 494 aa overlap. Contains Prosite hits to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature.  Also contains 2x Pfam matches to entry PF00005 ABC_tran, ABC transporter. ABC transporter protein, ATP binding component.	Ribose import ATP-binding protein rbsA	Ribose import ATP-binding protein rbsA	Ribose import ATP-binding protein rbsA	Ribose import ATP-binding protein rbsA	ribose ABC transporter ATP-binding protein	IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter ABC superfamily (atp_bind), D-ribose high-affinity transport protein	similar to Salmonella typhi CT18 high affinity ribose transport protein high affinity ribose transport protein	Ribose import ATP-binding protein rbsA	identified by match to PFAM protein family HMM PF00005 ribose ABC transporter, ATP-binding protein	ribose transport ATP-binding protein RbsA	Similar to: HI0502, RBSA_HAEIN Ribose transport ATP-binding protein	Ribose import ATP-binding protein rbsA	
ECOLI03632	Ribose transport system permease protein rbsC	Probable ribose ABC transporter	RbsC	Ribose ABC transporter, permease protein	High affinity ribose transport protein	Ribose ABC transporter, permease protein	Putative ribose ABC transporter, permease protein	Ribose transport system permease protein rbsC	Ribose ABC transporter, permease protein	Ribose transport permease system protein	ribose ABC transporter (permease)	Ribose ABC transporter, permease protein	Ribose transport system permease protein rbsC	Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component	Residues 1 to 321 of 321 are 99 pct identical to residues 1 to 321 of a 321 aa protein from Escherichia coli O157:H7 ref: NP_312719.1 D-ribose high-affinity transport system permease protein	Putative sugar transport system, permease protein	Ribose transport system permease protein RbsC	D-ribose transport system permease protein	Sugar ABC transporter	ribose ABC transporter permease	RbsC ribose ABC transporter	Ribose ABC transporter permease protein	IPR001851: Bacterial inner-membrane translocator ABC superfamily (membrane), D-ribose high-affinity transport protein (1st module, ATP-binding subunit)	Putative uncharacterized protein gbs0114	identified by match to PFAM protein family HMM PF02653 ribose ABC transporter, permease protein	Putative ABC sugar (Sorbitol) transporter, permease subunit	ribose transport system permease protein RbsC	Similar to: HI0503, RBSC_HAEIN Ribose transport system permease protein	D-ribose high-affinity transport protein	
ECOLI03633	D-ribose-binding periplasmic protein	RbsB	ABC-type sugar transport system, periplasmic component	ABC transporter, substrate binding protein	D-ribose-binding periplasmic protein	ABC-type transporter, periplasmic component	Putative sugar-binding exported protein	Putative ribose ABC transporter, periplasmic D-ribose-binding protein	D-ribose-binding periplasmic protein	Ribose ABC transporter, periplasmic D-ribose- binding protein	Putative sugar ABC transport system, substrate- binding protein	Ribose-binding periplasmic protein	D-ribose-binding periplasmic protein	Putative sugar ABC transport system, substrate- binding protein	ribose ABC transporter (ribose-binding protein)	Ribose ABC transporter, periplasmic ribose- binding protein	Ribose ABC transporter, periplasmic D-ribose- binding protein	D-ribose periplasmic binding protein	CDS_ID OB2572 ribose ABC transporter ribose-binding protein	Ribose ABC transporter	Periplasmic sugar-binding proteins	ABC-type sugar transport system, periplasmic component	similar to Escherichia coli K12 D-ribose periplasmic binding protein gi: 1790192 (297 aa). BLAST with identity of 98% in 297 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	putative D-ribose-binding protein mutant	D-ribose-binding periplasmic protein RbsB	Ribose ABC transporter, substrate binding protein	Sugar uptake ABC transporter periplasmic solute- binding protein	InterProMatches:IPR001761; ribose transport ribose ABC transporter (ribose-binding protein)	ribose ABC transporter substrate-binding protein	
ECOLI03634	Ribokinase	hypothetical protein;similar to ribokinase;	Putative ribokinase. [Source:SGD;Acc:S000000632]	Ribokinase	Putative ribokinase [Source:GeneDB_Spombe;Acc:SPBC16G5.02c]	similar to sp|P25332 Saccharomyces cerevisiae YCR036w RBK1 ribokinase singleton, start by similarity	Ribokinase	Ribokinase	Ribokinase	Ribokinase	similar to uniprot|P25332 Saccharomyces cerevisiae YCR036w RBK1 ribokinase;	DEHA2G10076p;similar to uniprot|P25332 Saccharomyces cerevisiae YCR036W RBK1 Putative ribokinase;	Probable ribokinase	Ribokinase	Ribokinase	Ribokinase	RbsK	Ribokinase	Ribokinase	Sugar kinase	Ribokinase	Ribokinase	Ribokinase	Ribokinase	Ribokinase	Ribokinase	Ribokinase	Putative ribokinase	Putative ribokinase	
ECOLI03636	Probable transport protein hsrA	Putative transport protein	Residues 1 to 475 of 475 are 98 pct identical to residues 1 to 475 of a 475 aa protein from Escherichia coli K12 ref: NP_418210.1 putative transport protein	Putative membrane transport protein	IPR001411: Tetracycline resistance protein TetB; IPR007114: Major facilitator superfamily putative MFS family tranport protein (1st mdule)	similar to Salmonella typhimurium putative MFS family tranport protein (1st mdule) putative MFS family tranport protein (1st mdule)	MFS multidrug:H+ antiporter	Putative MFS family tranport protein	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	Code: GEPR; COG: COG0477 putative transport protein	MFS transporter identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711	Hypothetical transport protein YieO	Putative membrane transport protein precursor	Hypothetical transport protein YieO	Membrane transport protein precursor	Putative membrane transport protein precursor	putative transport protein Code: GEPR; COG: COG0477	Membrane transport protein precursor	putative transport protein YieO	Drug resistance transporter, EmrB/QacA subfamily precursor	Putative transport protein	Putative uncharacterized protein	Drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family	Drug resistance transporter, EmrB/QacA subfamily precursor	Predicted multidrug or homocysteine efflux system	Transporter, major facilitator family	Drug resistance MFS transporter, drug:H+ antiporter-1 (DHA2) family	Drug resistance transporter, EmrB/QacA subfamily precursor	
ECOLI03635	Ribose operon repressor	Ribose operon repressor	Ribose operon repressor	Ribose operon repressor	Residues 1 to 330 of 330 are 99 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290392.1 regulator for rbs operon	Ribose operon repressor	IPR000843: Bacterial regulatory protein LacI, HTH motif transcriptional repressor for rbs operon (GalR/LacI family)	Transcriptional repressor for rbs operon	Code: K; COG: COG1609 regulator for rbs operon	Code: K; COG: COG1609 regulator for rbs operon	Code: K; COG: COG1609 regulator for rbs operon	Ribose operon repressor	Regulator for rbs operon	regulator for rbs operon Code: K; COG: COG1609	DNA-binding transcriptional repressor of ribose metabolism	Transcriptional regulator, LacI family	Regulator for rbs operon	Putative uncharacterized protein	Ribose operon repressor	Transcriptional regulator, LacI family	Transcriptional regulator, LacI family	Ribose operon repressor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Ribose operon repressor	Transcriptional repressor for rbs operon	Ribose operon repressor	Ribose operon repressor	
ECOLI03637	Uncharacterized HTH-type transcriptional regulator yieP	Putative GntR-family transcriptional regulator	hypothetical transcriptional regulator	Hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region	Putative GntR-family regulatory protein	Hypothetical GntR-famly transcriptional regulator	Hypothetical transcriptional regulator yieP	GntR-family transcriptional regulator	Transcriptional regulator. GntR family	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	TRANSCRIPTIONAL REGULATOR, GNTR FAMILY	Putative uncharacterized protein yieP	similar to AJ003022-2|CAA05808.1| percent identity: 34 in 227 aa putative transcription factor	Residues 1 to 230 of 230 are 99 pct identical to residues 1 to 230 of a 230 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290394.1 yieP gene product	Putative GntR-famly transcriptional regulator	Transcriptional regulator protein	IPR000524: Bacterial regulatory protein, GntR family putative regulatory protein, gntR family	similar to Salmonella typhi CT18 hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region	similar to BRA0944, this region is similar to BMEII0352 and BRA0944, transcriptional regulator, GntR family transcriptional regulator, GntR family	GntR-famly transcriptional regulator	Transcriptional regulator, GntR family	Putative gntR family regulatory protein	identified by match to protein family HMM PF00392; match to protein family HMM PF07729 transcriptional regulator, GntR family	regulatory protein GntR, HTH:GntR, C-terminal	Code: K; COG: COG2186 conserved hypothetical protein	Bacterial regulatory protein, GntR family	transcriptional regulator, GntR family	transcriptional regulator, GntR family	Code: K; COG: COG2186 yieP gene product	




ECOLI03638	HTH-type transcriptional regulator hdfR	Transcriptional regulator	HTH-type transcriptional regulator hdfR	hypothetical transcriptional regulator, LysR family	HTH-type transcriptional regulator hdfR	Transcriptional regulator, LysR family	LysR-family transcriptional regulator	Transcriptional regulator, LysR family	LysR-family transcriptional regulator	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Transcriptional regulator, LysR family	HTH-type transcriptional regulator hdfR	transcriptional regulator	Transcriptional regulator	Residues 1 to 279 of 279 are 99 pct identical to residues 1 to 279 of a 279 aa protein from Escherichia coli K12 ref: NP_418212.1 Transcription regulator	HTH-type transcriptional regulator hdfR	Possible regulatory protein PssR	transcriptional regulator, LysR family	IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR005119: LysR substrate binding domain putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 possible LysR-family transcriptional regulatory protein possible LysR-family transcriptional regulatory protein	HTH-type transcriptional regulator hdfR	transcriptional regulator, LysR family	Transcriptional regulator, LysR family	HTH-type transcriptional regulator hdfR	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	identified by match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator, LysR family	regulatory protein, LysR:LysR, substrate-binding	Code: K; COG: COG0583 Transcription regulator	Evidence 2b : Function of strongly homologous gene; PubMedId : 10913108; Product type r : regulator putative transcriptional regulator, LysR family	
ECOLI03639	UPF0438 protein yifE	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	UPF0438 protein yifE	conserved hypothetical protein	Protein yifE	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VPA0040	UPF0438 protein yifE	Uncharacterized protein conserved in bacteria	Residues 1 to 112 of 112 are 100 pct identical to residues 1 to 112 of a 112 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290396.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YifE of Escherichia coli	putative LysR type transcriptional regulator with pssR	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Similar to: HI0847, YIFE_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved protein	UPF0438 protein yifE	conserved hypothetical protein	Code: S; COG: COG3085 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function; Product type r : regulator conserved protein of unknown function ; putative transcriptional regulator with pssR	Code: S; COG: COG3085 conserved hypothetical protein	conserved hypothetical protein	uncharacterized protein conserved in bacteria COG3085	
ECOLI03640	Uncharacterized protein yifB	MG(2+) chelatase family protein	Mg chelatase-related protein	Competence-related protein	Slr0904 protein	Competence related protein	Competence protein comM	Magnesium chelatase, subunit ChlI	Magnesium-chelatase, subunit D/I family	Putative magnesium chelatase	Putative uncharacterized protein	Putative uncharacterized protein	Mg(2+) chelatase family protein	Probable competence-related protein	ComM protein	Competence protein ComM	ComM	Putative uncharacterized protein	Putative uncharacterized protein	ComM protein	ComM-related protein	Mg(2+) chelatase family protein	Putative uncharacterized protein	Mg(2+) chelatase family protein	Putative uncharacterized protein	Competence protein	Probable competence protein ComM	Predicted ATPase with chaperone activity	Magnesium chelatase subunit ChlI	


ECOLI03643	Acetolactate synthase isozyme 2 small subunit	Acetohydroxy acid synthase II, small subunit	Acetolactate synthase isozyme II small subunit	Acetolactate synthase II, small subunit	Acetolactate synthase isozyme II small subunit	Acetolactate synthase II, valine insensitive, small subunit	Residues 1 to 87 of 87 are 100 pct identical to residues 1 to 87 of a 87 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290400.1 acetolactate synthase II, valine insensitive, small subunit	Acetolactate synthase isozyme II small subunit	Acetolactate synthase isozyme II small subunit	Acetolactate synthase II, small subunit	acetolactate synthase II, small subunit	similar to Salmonella typhi CT18 acetohydroxy acid synthase II, small subunit acetohydroxy acid synthase II, small subunit	Acetolactate synthase isozyme II small subunit	Acetolactate synthase, small subunit IlvH protein	Acetolactate synthase II, small subunit	identified by similarity to SP:P13048 acetolactate synthase II, small subunit	ortholog to Escherichia coli bnum: b3769; MultiFun: Metabolism 1.5.1.18 acetolactate synthase II, small subunit	Code: S; COG: COG3978 valine-insensitive acetolactate synthase II small subunit	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3907697; Product type e : enzyme acetolactate synthase II, small subunit	Code: S; COG: COG3978 acetolactate synthase II, valine insensitive, small subunit	acetolactate synthase isozyme II small subunit	Code: S; COG: COG3978 acetolactate synthase II, valine insensitive, small subunit	Amino acid-binding ACT	Acetolactate synthase small subunit	Acetolactate synthase isozyme II small subunit	Acetolactate synthase small subunit	Acetolactate synthase II small subunit	Acetohydroxy acid synthase II, small subunit	Acetolactate synthase isozyme II small subunit	
ECOLI03644	Branched-chain-amino-acid aminotransferase	Branched-chain amino acid aminotransferase	Putative branched-chain-amino-acid aminotransferase	Branched-chain amino acid aminotransferase	Branched-chain amino acid aminotransferase	Branched-chain amino acid aminotransferase	Branched-chain amino acid amiotransferase	Branched-chain amino acid aminotransferase	Branched-chain-amino-acid aminotransferase	Alr1260 protein	Putative branched-chain amino acid aminotransferase; 4-amino-4-deoxychorismate lyase	Branched-chain-amino-acid aminotransferase	branched-chain amino acid aminotransferase	Branched-chain amino acid aminotransferase	Branched-chain amino acid amiotransferase	Branched-chain amino acid aminotransferase	BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE	Branched-chain amino acid aminotransferase	Branched-chain amino acid amiotransferase	Branched-chain-amino-acid aminotransferase	Branched-chain amino acid aminotransferase	Residues 1 to 309 of 309 are 99 pct identical to residues 7 to 315 of a 315 aa protein from Escherichia coli prf: 1104250A aminotransferase,branched chain AA	Branched-chain amino acid aminotransferase	Aminotransferases class-IV	Probable branched-chain amino acid aminotransferase protein	Branched-chain amino acid aminotransferase	identified by match to protein family HMM PF01063; match to protein family HMM TIGR01122 branched-chain amino acid aminotransferase	Branched-chain amino-acid aminotransferase	Branched-chain amino acid aminotransferase	
ECOLI03645	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Putative dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110 dihydroxy-acid dehydratase	
ECOLI03646	Threonine dehydratase biosynthetic	Threonine deaminase, catalyzes the first step in isoleucine biosynthesis; expression is under general amino acid control; ILV1 locus exhibits highly positioned nucleosomes whose organization is independent of known ILV1 regulation. [Source:SGD;Acc:S000000888]	similar to sp|P00927 Saccharomyces cerevisiae YER086w ILV1 anabolic serine and threonine dehydratase precursor, hypothetical start	Threonine dehydratase, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC1677.03c]	L-threonine deaminase	Threonine dehydratase biosynthetic	highly similar to uniprot|P00927 Saccharomyces cerevisiae YER086w ILV1 anabolic serine and threonine dehydratase precursor;	DEHA2F02244p;similar to uniprot|P00927 Saccharomyces cerevisiae YER086W ILV1 Threonine deaminase catalyzes the first step in isoleucine biosynthesis;	Threonine dehydratase	Threonine dehydratase	Threonine dehydratase biosynthetic	Threonine dehydratase, biosynthetic	Threonine dehydratase	Threonine dehydratase, biosynthetic	Threonine dehydratase	Threonine deaminase	Threonine dehydratase	Probable threonine dehydratase, biosynthetic	IlvA protein	Threonine dehydratase biosynthetic	Putative threonine dehydratase	Threonine dehydratase biosynthetic	identified by match to TIGR protein family HMM TIGR01137 threonine dehydratase, biosynthetic, putative	Threonine dehydratase	Threonine dehydratase biosynthetic	go_component: mitochondrion [goid 0005739]; go_function: threonine ammonia-lyase activity [goid 0004794]; go_process: branched chain family amino acid biosynthesis [goid 0009082] threonine ammonia-lyase, putative	Threonine dehydratase	Threonine dehydratase biosynthetic	Putative threonine dehydratase	
ECOLI03647	HTH-type transcriptional regulator ilvY	IlvY	Transcriptional activator IlvY	HTH-type transcriptional activator ilvY	Probable transcriptional activator protein	transcriptional activator IlvY	Transcriptional activator protein ilvY	Transcriptional activator IlvY	LysR-family transcriptional activator of ilvC	Transcriptional activator IlvY	Positive regulator for ilvC	Residues 29 to 324 of 324 are 98 pct identical to residues 1 to 296 of a 297 aa protein from Escherichia coli K12 ref: NP_418221.1 positive regulator for ilvC	LysR-family transcriptional regulatory protein	Transcriptional activator protein	Transcription regulator	IPR000847: Bacterial regulatory protein LysR, HTH motif positive regulator for ilvC (LysR family)	similar to Salmonella typhi CT18 LysR-family regulatory protein for ilvC expression LysR-family regulatory protein for ilvC expression	LysR-family transcriptional regulatory protein	transcriptional activator protein ilvY	Similar to: HI0681, ILVY_HAEIN HTH-type transcriptional activator IlvY	Transcriptional regulator LysR protein	HTH-type transcriptional activator ilvY	identified by similarity to SP:P05827; match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator IlvY	Code: K; COG: COG0583 positive regulator for ilvC	similar to gi|48870927|ref|ZP_00323644.1| [Pediococcus pentosaceus ATCC 25745], percent identity 57 in 288 aa, BLASTP E(): 8e-92 putative transcriptional regulator	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3003115; Product type r : regulator putative transcriptional activator IlvY (LysR family)	Code: K; COG: COG0583 positive regulator for ilvC	lysR-family transcriptional regulator	Code: K; COG: COG0583 positive regulator for ilvC	
ECOLI03648	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase 2	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	putative ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Ketol-acid reductoisomerase	Residues 51 to 541 of 541 are 99 pct identical to residues 1 to 491 of a 491 aa protein from Escherichia coli K12 ref: NP_418222.1 ketol-acid reductoisomerase	Ketol-acid reductoisomerase	
ECOLI03649	Peptidyl-prolyl cis-trans isomerase C	Parvulin-like peptidyl-prolyl isomerase	Peptidyl-prolyl cis-trans isomerase C	putative peptidyl-prolyl cis-trans isomerase C	Peptidyl-prolyl cis-trans isomerase C	Peptidyl-prolyl cis-trans isomerase C	Peptidyl-prolyl cis-trans isomerase C	Peptidyl-prolyl cis-trans isomerase C	Peptidyl-prolyl cis-trans isomerase C	Peptidyl-prolyl cis-trans isomerase C	Peptidyl-prolyl cis-trans isomerase C	Peptidyl-prolyl cis-trans isomerase C	Parvulin-like peptidyl-prolyl isomerase	Residues 1 to 93 of 93 are 98 pct identical to residues 1 to 93 of a 93 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290406.1 peptidyl-prolyl cis-trans isomerase C (rotamase C)	Peptidyl-prolyl cis-trans isomerase C	IPR000297: PpiC-type peptidyl-prolyl cis-trans isomerase peptidyl-prolyl cis-trans isomerase C (rotamase C)	similar to Salmonella typhi CT18 peptidyl-prolyl cis-trans isomerase C peptidyl-prolyl cis-trans isomerase C	Peptidyl-prolyl cis-trans isomerase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)	peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase C	Parvulin-like peptidyl-prolyl isomerase	Peptidyl-prolyl cis-trans isomerase C	identified by match to protein family HMM PF00639 peptidyl-prolyl cis-trans isomerase C	identified by match to protein family HMM PF00639 peptidyl-prolyl cis-trans isomerase C	PpiC-type peptidyl-prolyl cis-trans isomerase	rotamase C; Code: O; COG: COG0760 peptidyl-prolyl cis-trans isomerase C	Evidence 2b : Function of strongly homologous gene; Product type mc : molecular chaperone peptidyl-prolyl cis-trans isomerase C (rotamase C)	

ECOLI03651	ATP-dependent DNA helicase rep	ATP-dependent DNA helicase	ATP-dependent DNA helicase rep	ATP-dependent DNA helicase REP	ATP-dependent DNA helicase	Rep	ATP-dependent DNA helicase Rep	ATP-dependent DNA helicase Rep	ATP-dependent DNA helicase pcrA	ATP-dependent DNA helicase	ATP-dependent DNA helicase Rep	putative ATP-dependent DNA helicase Rep	Rep helicase, single-stranded DNA-dependent ATPase	ATP-dependent DNA helicase	ATP-dependent DNA helicase rep	ATP-dependent DNA helicase Rep	ATP-dependent DNA helicase	ATP-dependent DNA helicase	ATP-dependent DNA helicase Rep	Rep helicase, single-stranded DNA-dependent ATPase	ATP-dependent DNA helicase	ATP-dependent DNA helicase rep	ATP-dependent DNA helicase Rep	ATP-dependent DNA helicase	ATP-dependent DNA helicase UvrD/PcrA/Rep Family	ATP-dependent DNA helicase Rep	ATP-dependent DNA helicase Rep	Rep helicase, a single-stranded DNA dependent ATPase	ATP-dependent DNA helicase PcrA	
ECOLI03652	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Putative exopolyphosphatase	Exopolyphosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Uncharacterized protein ML2434	putative exopolyphosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Putative phosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Putative exopolyphosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Exopolyphosphatase	Residues 4 to 497 of 497 are 99 pct identical to residues 1 to 494 of a 494 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290409.1 guanosine pentaphosphatase; exopolyphosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	identified by match to protein family HMM PF02541 phosphatase, Ppx/GppA family	Exopolyphosphatase protein	guanosine pentaphosphatase and exopolyphosphatase	similar to Salmonella typhi CT18 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (guanosine pentaphosphatase) guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (guanosine pentaphosphatase)	Exopolyphosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Code: FP; COG: COG0248 guanosine pentaphosphatase; exopolyphosphatase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8394006; Product type e : enzyme Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (Guanosine pentaphosphate phosphohydrolase) (pppGpp-5'-phosphohydrolase)	
ECOLI03653	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase	ATP-dependent RNA helicase rhlB	Related to ATP-dependent RNA helicase	putative ATP-dependent RNA helicase, DEAD boxfamily	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase	Residues 1 to 421 of 421 are 100 pct identical to residues 1 to 421 of a 421 aa protein from Escherichia coli K12 ref: NP_418227.1 putative ATP-dependent RNA helicase	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ATP-dependent RNA helicase	IPR000629: ATP-dependent helicase, DEAD-box; IPR001410: DEAD/DEAH box helicase putative helicase	ATP-dependent RNA helicase rhlB	ATP-dependent RNA helicase rhlB	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme ATP-dependent RNA helicase (DEAD box)	
ECOLI03654	Thioredoxin-1	Thioredoxin-2, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC12D12.07c]	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	TrxA	DEHA2G04488p;highly similar to uniprot|P22217 Saccharomyces cerevisiae YLR043c TRX1 thioredoxin I;	identified by match to TIGR protein family HMM TIGR00411 thioredoxin	Thioredoxin	Putative thioredoxin	Thioredoxin	Thioredoxin	hypothetical thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thioredoxin	Thiol-disulfide isomerase and thioredoxin	
ECOLI03656	Transcription termination factor rho	Transcription termination factor rho	Transcription termination factor Rho	Transcription termination factor Rho	Transcription termination factor Rho	Transcription termination factor rho	identified by match to PFAM protein family HMM PF02887 transcription termination factor Rho	Transcription termination factor Rho	Putative transcription termination factor	Transcription termination factor rho	Transcription terminator Rho factor	Transcription termination factor Rho	Transcription termination factor Rho	Transcription termination factor rho	Transcription termination factor Rho	Rho	Transcription termination factor rho	Transcription termination factor	Transcription termination factor rho	Transcription termination factor	Transcription termination factor rho	Transcription termination factor rho	Transcription termination factor rho	Transcription termination factor Rho	Transcription termination factor rho	Transcription termination factor Rho	Probable transcription termination factor Rho	Rho protein	Transcription termination factor rho	

ECOLI03657	Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	Putative undecaprenyl-phosphate alpha-N- acetylglucosaminyl 1-phosphate transferase	Putative teichoic acid linkage unit synthesis	Undecaprenyl-phosphate-alpha-N- acetylglucosaminyltransferase	hypothetical UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase	Putative UDP-N-acetylglucosamine-1-phosphate transferase	Probable undecaprenyl-phosphate N- acetylglucosaminyltransferase	Glycosyl transferase, group 4 family protein	Putative undecaprenyl-phosphate alpha-N- acetylglucosaminyl 1-phosphate transferase	Undecaprenyl-phosphate alpha-N- acetylglucosaminyltransferase, putative	Putative glycosyltransferase	Undecaprenyl-phosphate alpha N- acetylglucosaminyltransferase	Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	Glycosyltransferase, group 4 family	Putative undecaprenyl-phosphate alpha-N- acetylglucosaminyl 1-phosphate transferase	Undecaprenyl-phosphate alpha-N- acetylglucosaminyltransferase	Undecaprenyl-phosphate alpha-N- acetylglucosaminephosphotransferase	Glycosyl transferase, group 4 family	Putative undecaprenyl phosphate N- acetylglucosaminyltransferase	Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	identified by match to protein family HMM PF00953 glycosyl transferase, group 4 family protein	similar to GP:15158359, GB:J00109, GB:K03512, GB:M28637, GB:A15601, GB:K03513, GB:A11954, GB:X15943, SP:P01258, SP:P06881, PID:1340176, PID:179799, PID:179828, PID:180466, PID:296638, and PID:457134; identified by sequence similarity; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase, putative	Probable glycosyltransferase	Probable glycosyltransferase	Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	PMID: 1379743 best DB hits: BLAST: pir:S74927; lipophilic protein lim - Synechocystis sp. (strain PCC; E=3e-20 pir:B69721; teichoic acid linkage unit synthesis tagO - Bacillus; E=8e-19 pir:A55856; llm protein - Staphylococcus aureus ----- ddbj:; E=3e-18 COG: sll0648; COG0472 UDP-N-acetylmuramyl pentapeptide; E=2e-21 PFAM: PF00953; Glycosyl transferase; E=1.3e-27 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase	Putative undecaprenyl-phosphate alpha-N- acetylglucosaminyltransferase	Probable glycosyltransferase	UNDECAPRENYL PHOSPHATE N- ACETYLGLUCOSAMINYLTRANSFERASETRANSMEMBRANE PROTEIN	
ECOLI03658	Lipopolysaccharide biosynthesis protein wzzE	Lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein wzzE	Lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein wzzE	Residues 1 to 349 of 349 are 99 pct identical to residues 1 to 349 of a 349 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290416.1 putative transport protein	Putative lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein WzzE	modulator of enterobacterial common antigen (ECA) polysaccharide chain length	similar to Salmonella typhi CT18 lipopolysaccharide biosynthesis protein lipopolysaccharide biosynthesis protein	Putative lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein wzzE	Code: M; COG: COG3765 putative transport protein	Code: M; COG: COG3765 putative transport protein	putative lipopolysaccharide biosynthesis protein	Code: M; COG: COG3765 putative transport protein	Lipopolysaccharide biosynthesis protein WzzE	Putative lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein WzzE	Lipopolysaccharide biosynthesis protein	Putative lipopolysaccharide biosynthesis protein	putative transport protein Code: M; COG: COG3765	Lipopolysaccharide biosynthesis protein	entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein WzzE	Lipopolysaccharide biosynthesis protein	Polysaccharide chain-length regulator	Putative uncharacterized protein	Lipopolysaccharide biosynthesis protein WzzE	Lipopolysaccharide biosynthesis protein	
ECOLI03659	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	Putative UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	PMID: 8226648 best DB hits: BLAST: pir:A82264; UDP-N-acetylglucosamine 2-epimerase VC0917 [imported] -; E=1e-106 pir:T44828; probable UDP-N-acetylglucosamine 2-epimerase (EC; E=1e-101 swissprot:P27828; WECB_ECOLI UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE; E=1e-101 COG: VC0917; COG0381 UDP-N-acetylglucosamine 2-epimerase; E=1e-107 PFAM: PF02350; UDP-N-acetylglucosamine 2-epimera; E=1.7e-162 UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetyl glucosamine-2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	Residues 1 to 390 of 390 are 98 pct identical to residues 1 to 390 of a 390 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290417.1 UDP-N-acetyl glucosamine -2-epimerase; synthesis of enterobacterial common antigen (ECA)	UDP-N-acetylglucosamine 2-epimerase	UDP-N-acetylglucosamine 2-epimerase	
ECOLI03660	UDP-N-acetyl-D-mannosamine dehydrogenase	UDP-glucose/GDP-mannose dehydrogenase family protein	UDP-N-acetyl-D-mannosamine dehydrogenase	UDP-N-acetyl-D-mannosamine dehydrogenase	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase	NDP-sugar dehydrogenase	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	UDP-N-acetyl-D-mannosamine dehydrogenase	UDP-glucose/GDP-mannose dehydrogenase family protein	Putative uncharacterized protein	UDP-N-acetyl-D-mannosamine dehydrogenase	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase	UDP-N-acetyl-D-mannosamine dehydrogenase	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase	UDP-N-acetyl-D-mannosamine dehydrogenase	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Residues 1 to 420 of 420 are 100 pct identical to residues 1 to 420 of a 420 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290418.1 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; synthesis of enterobacterial common antigen (ECA)	UDP-N-acetyl-D-mannosamine dehydrogenase	Capsular polysaccharide synthesis enzyme Cap8O	NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase	similar to Salmonella typhi Ty2 UDP-ManNAc dehydrogenase UDP-ManNAc dehydrogenase	capsular polysaccharide synthesis enzyme Cap8O	Putative UDP-glucose/GDP-mannose dehydrogenase	Ortholog of S. aureus MRSA252 (BX571856) SAR0165 capsular polysaccharide synthesis enzyme	capsular polysaccharide synthesis enzyme Cap8O	Similar to Escherichia coli UDP-N-acetyl-D-mannosamine dehydrogenase WecC or RffD or b3787 SWALL:WECC_ECOLI (SWALL:P27829) (420 aa) fasta scores: E(): 2.6e-75, 54.56% id in 394 aa, and to Bacteroides thetaiotaomicron UDP-N-acetyl-D-mannosamine dehydrogenase BT2945 SWALL:AAO78051 (EMBL:AE016938) (400 aa) fasta scores: E(): 1.3e-139, 89% id in 400 aa, and to Bacteroides fragilis UDP-ManNAc dehydrogenase MnaB SWALL:Q9RGJ9 (EMBL:AF125164) (408 aa) fasta scores: E(): 7.1e-101, 65.65% id in 396 aa putative UDP-N-acetyl-D-mannosamine dehydrogenase	
ECOLI03661	dTDP-glucose 4,6-dehydratase	DTDP-glucose 4,6-dehydratase	DTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	DTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	Residues 1 to 355 of 355 are 98 pct identical to residues 1 to 355 of a 355 aa protein from Escherichia coli K12 ref: NP_418235.1 dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-glucose-4,6-dehydratase	dTDP-glucose 4,6-dehydratase	Mb3493, rmlB1, len: 331 aa. Equivalent to Rv3464, len: 331 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 331 aa overlap). Probable rmlB1 (alternate gene name: rfbB), DTDP-glucose-4,6-dehydratase (EC 4.2.1.46), nearly identical to Q50556|RMLB rhamnose biosynthesis protein (EC 4.2.1.46) from Mycobacterium tuberculosis (329 aa) (previously rfbB, now known as rmlB). Equivalent to Q9CBH7|RMLB|ML1964 DTDP-GLUCOSE 4,6-DEHYDRATASE (alias Q9X7A3|RMLB PUTATIVE DTDP-(GLUCOSE OR RHAMNOSE)-4,6-DEHYDRATASE (331 aa)) from Mycobacterium leprae (333 aa), FASTA scores: opt: 1925, E(): 1.9e-112, (84.0% identity in 331 aa overlap). Also highly similar to others e.g. Q9UZH2|RFBB|PAB0785 from Pyrococcus abyssi (333 aa), FASTA scores: opt: 1115, E(): 4.2e-62, (51.55% identity in 322 aa overlap); O27817|MTH1789 from Methanobacterium thermoautotrophicum (336 aa), FASTA scores: opt: 1104, E(): 2.1e-61, (51.65% identity in 331 aa overlap); BAB60064|TVG0950610 from Thermoplasma volcanium (318 aa), FASTA scores: opt: 1102, E(): 2.6e-61, (49.65% identity in 310 aa overlap); etc. Also related to P72050|MTCY13D12.18|RV3784 HYPOTHETICAL 36.3 KDA PROTEIN (SIMILAR TO GALACTOWALDENASES FROM EUKARYOTIC AND PROKARYOTIC Origin) from Mycobacterium tuberculosis (326 aa), FASTA scores: E(): 1.4e-26, (33.8% identity in 320 aa overlap). PROBABLE DTDP-GLUCOSE 4,6-DEHYDRATASE RMLB1	dTDP-glucose 4,6-dehydratase	similar to Salmonella typhi CT18 UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase)	dTDP-glucose 4,6-dehydratase	DTDP-glucose 4,6-dehydratase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme dTDP-D-glucose-4,6-dehydratase	dTDP-glucose-4,6-dehydratase	dTDP-glucose 4,6-dehydratase	dTDP-D-glucose 4,6-dehydratase	
ECOLI03662	Glucose-1-phosphate thymidylyltransferase 2	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase related protein	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Residues 1 to 293 of 293 are 100 pct identical to residues 1 to 293 of a 293 aa protein from Escherichia coli K12 ref: NP_418236.1 glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	glucose-1-phosphate thymidylyltransferase	similar to Salmonella typhi Ty2 glucose-1-phosphate thymidylyltransferase glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	Glucose-1-phosphate thymidylyltransferase	dTDP-glucose synthase; dTDP-glucose phosphorylase glucose-1-phosphate thymidyltransferase	Best Blastp Hit: sp|P37762|RFBA_NEIGO glucose-1-phosphate thymidylyltransferase (DTDP-glucose synthase) (DTDP-glucose pyrophosphorylase) >gi|628591|pir||S47046 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) - Neisseria gonorrhoeae >gi|520897|emb|CAA83653.1| (Z32742) Glucose-1-phosphate thymidylyltransferase [Neisseria gonorrhoeae] >gi|1333794|emb|CAA79719.1| (Z21508) glucose-1-phosphate thymid transferase [Neisseria gonorrhoeae] COG1209 dTDP-glucose pyrophosphorylase glucose-1-phosphate thymidylyltransferase	Code: M; COG: COG1209 glucose-1-phosphate thymidylyltransferase	Code: M; COG: COG1209 glucose-1-phosphate thymidylyltransferase	glucose-1-phosphate thymidylyltransferase	
ECOLI03663	Lipopolysaccharide biosynthesis protein rffC	Lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein rffC	Lipopolysaccharide biosynthesis protein	Putative uncharacterized protein wecD	Residues 44 to 224 of 224 are 98 pct identical to residues 1 to 181 of a 181 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290421.1 wecD gene product	Putative lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein wecD	lipopolysaccharide biosynthesis protein	similar to Salmonella typhi Ty2 lipopolysaccharide biosynthesis protein lipopolysaccharide biosynthesis protein	Putative lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein	putative TDP-D-fucosamine acetyltransferase	Code: KR; COG: COG0454 conserved hypothetical protein	Code: KR; COG: COG0454 conserved hypothetical protein	putative lipopolysaccharide biosynthesis protein	Code: KR; COG: COG0454; orf conserved hypothetical protein	Lipopolysaccharide biosynthesis protein RffC	Putative lipopolysaccharide biosynthesis protein	TDP-fucosamine acetyltransferase	Lipopolysaccharide biosynthesis protein	Putative lipopolysaccharide biosynthesis protein	conserved hypothetical protein Code: KR; COG: COG0454	Lipopolysaccharide biosynthesis protein	lipopolysaccharide biosynthesis protein RffC TDP-fucosamine acetyltransferase	Putative TDP-D-fucosamine acetyltransferase	TDP-D-fucosamine acetyltransferase	TDP-fucosamine acetyltransferase	Putative uncharacterized protein	
ECOLI03664	Lipopolysaccharide biosynthesis protein rffA	Lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein rffA	Lipopolysaccharide biosynthesis protein	Putative lipopolysaccharide biosynthesis protein	Putative regulator	CDS_ID OB2416 lipopolysaccharide biosynthesis	Residues 1 to 376 of 376 are 99 pct identical to residues 1 to 376 of a 376 aa protein from Escherichia coli K12 ref: NP_418238.1 putative regulator	Putative lipopolysaccharide biosynthesis protein	DegT/DnrJ/EryC1/StrS family	WecE protein	Lipopolysaccharide biosynthesis protein WecE	Mb1542c, -, len: 382 aa. Equivalent to Rv1503c and Rv1504c, len: 182 aa and 199 aa, from Mycobacterium tuberculosis strain H37Rv, (99.5% identity in 182 aa overlap and 100% identity in 199 aa overlap). Conserved hypothetical protein, similar to C-terminal region of P27833|RFFA_ECOLI LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN from Escherichia coli (376 aa), FASTA scores: opt: 565, E(): 0, (49.4% identity in 170 aa overlap) and similar to N-terminal region of P27833|RFFA_ECOLI LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN from Escherichia coli (376 aa), FASTA scores: opt: 863, E(): 0, (68.0% identity in 194 aa overlap); Rv1503c and Rv1504c are both similar to RFFA_ECOLI but are separated by a stop codon, sequence appears to be correct so possible pseudogene.  REMARK-M.bovis-M.tuberculosis: In Mycobacterium tuberculosis strain H37Rv, Rv1503c and Rv1504c exist as 2 genes. In Mycobacterium bovis, a single base transversion (t-g) leads to a single product. CONSERVED HYPOTHETICAL PROTEIN	TDP-4-oxo-6-deoxy-D-glucose transaminase	similar to Salmonella typhi Ty2 lipopolysaccharide biosynthesis protein lipopolysaccharide biosynthesis protein	Putative lipopolysaccharide biosynthesis protein	involved in regulation of cell wall biogenesis Predicted pyridoxal phosphate-dependent enzyme	TDP-4-oxo-6-deoxy-D-glucose transaminase	TDP-4-keto-6-deoxy-D-glucose transaminase	Code: M; COG: COG0399 putative regulator	Code: M; COG: COG0399 putative regulator	DegT/DnrJ/EryC1/StrS aminotransferase	putative lipopolysaccharide biosynthesis protein	Aromatic amino acid beta-eliminating lyase/threonine aldolase	Code: M; COG: COG0399 putative regulator	putative lipopolysaccharide biosynthesis protein similarity:fasta; with=UniProt:Q82SX9 (EMBL:BX321863); Nitrosomonas europaea.; DegT/DnrJ/EryC1/StrS family.; length=381; id 80.874; 366 aa overlap; query 1-366; subject 15-380 similarity:fasta; with=UniProt:RFFA_ECOLI (EMBL:B65183); Escherichia coli.; rffA; Lipopolysaccharide biosynthesis protein rffA.; length=376; id 60.606; 363 aa overlap; query 1-362; subject 9-371	Lipopolysaccharide biosynthesis protein RffA	Putative lipopolysaccharide biosynthesis protein	
ECOLI03665	Protein wzxE	Lipopolysaccharide biosynthesis protein	NADH-ubiquinone oxidoreductase	Repeating unit transporter related protein	Heteropolysaccharide repeat unit export protein	Polysaccharide biosynthesis protein	Putative lipopolysaccharide biosynthesis protein	Putative flippase	Putative lipopolysaccharide biosynthesis protein	WzxE protein	Enterobacterial common antigen (ECA) biosynthesis protein	Membrane protein, putative	Putative cytochrome	Polysaccharide exporter	Residues 1 to 416 of 416 are 100 pct identical to residues 1 to 416 of a 416 aa protein from Escherichia coli K12 ref: NP_418239.1 putative cytochrome	Putative lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein	Probable lipopolysaccharide biosynthesis protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark lipopolysaccharide biosynthesis protein	O-antigen translocase in LPS biosyntesis	similar to Salmonella typhi CT18 putative lipopolysaccharide biosynthesis protein putative lipopolysaccharide biosynthesis protein	Lipopolysaccharide biosynthesis protein	Putative PST family o-antigen export	O-antigen translocase in LPS biosyntesis	lipopolysaccharide biosynthesis protein	identified by similarity to PIR:D71147 membrane protein, putative	Code: R; COG: COG2244 putative cytochrome	Code: R; COG: COG2244 putative cytochrome	lipopolysaccharide biosynthesis protein	
ECOLI03666	4-alpha-L-fucosyltransferase	4-alpha-L-fucosyltransferase	4-alpha-L-fucosyltransferase	4-alpha-L-fucosyltransferase	Residues 1 to 359 of 359 are 98 pct identical to residues 1 to 359 of a 359 aa protein from Escherichia coli K12 ref: NP_418240.1 Uncharacterized conserved protein	4-alpha-L-fucosyltransferase	4-alpha-L-fucosyltransferase	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	4-alpha-L-fucosyltransferase	4-alpha-L-fucosyltransferase	TDP-Fuc4NAc:lipid II Fuc4NAc transferase	Uncharacterized conserved protein	Uncharacterized conserved protein	conserved hypothetical protein	Uncharacterized conserved protein	4-alpha-L-fucosyltransferase	Hypothetical protein	hypothetical protein	4-alpha-L-fucosyltransferase	Hypothetical protein	Hypothetical protein	Uncharacterized conserved protein	Hypothetical protein	4-alpha-L-fucosyltransferase	4-alpha-L-fucosyltransferase	Putative uncharacterized protein	4-alpha-L-fucosyltransferase	TDP-Fuc4NAc:lipidIIFuc4NAc transferase	
ECOLI03667	Putative ECA polymerase	Putative ECA polymerase	Putative ECA polymerase	Putative ECA polymerase	Residues 1 to 450 of 450 are 99 pct identical to residues 1 to 450 of a 450 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290425.1 TDP-Fuc4NAc:lipidII transferase; synthesis of enterobacterial common antigen (ECA)	Putative ECA polymerase	Putative ECA polymerase	IPR001064: Beta and gamma crystallin TDP-Fuc4NAc:lipidII transferase	similar to Salmonella typhi Ty2 probable 4-alpha-l-fucosyltransferase probable 4-alpha-l-fucosyltransferase	Putative ECA polymerase	Putative ECA polymerase	putative polysaccharide biosynthesis protein	synthesis of enterobacterial common antigen (ECA) TDP-Fuc4NAc:lipidII transferase	synthesis of enterobacterial common antigen (ECA) TDP-Fuc4NAc:lipidII transferase	putative 4-alpha-L-fucosyltransferase	synthesis of enterobacterial common antigen (ECA) TDP-Fuc4NAc:lipidII transferase	Putative ECA polymerase	4-alpha-L-fucosyltransferase	Putative ECA polymerase	4-alpha-L-fucosyltransferase	Probable 4-alpha-L-fucosyltransferase	putative enterobacterial common antigen polymerase	4-alpha-L-fucosyltransferase	putative enterobacterial common antigen polymerase WecF	Putative ECA polymerase	WzyE family protein	Enterobacterial common antigen polymerase	Putative uncharacterized protein	Putative ECA polymerase	
ECOLI03668	Probable UDP-N-acetyl-D-mannosaminuronic acid transferase	GumM protein	Glycosyl transferase WecB/TagA/CpsF family	Glycosyl transferase, WecB/TagA/CpsF family	WecB/TagA/CpsF family protein	Lipopolysaccharide biosynthesis protein, putative	UDP-N-acetyl-D-mannosaminuronic acid transferase, putative	Putative UDP-N-acetyl-D-mannosamine transferase	Probable UDP-N-acetyl-D-mannosaminuronic acid transferase	UDP-hexose transferase	Probable UDP-N-acetyl-D-mannosaminuronic acid transferase	UDP-N-acetyl-D-mannosaminuronic acid transferase	Glycosyltransferase, WecB/TagA/CpsF family	Lmo2521 protein	N-acetylglucosaminyldiphosphoundecaprenol N- acetyl-beta-D-mannosaminyltransferase	N-acetylglucosaminyldiphosphoundecaprenol N- acetyl-beta-D-mannosaminyltransferase	Probable UDP-N-acetyl-D-mannosaminuronic acid transferase	identified by match to PFAM protein family HMM PF03808 glycosyl transferase, WecB/TagA/CpsF family	UDP-N-acetyl-D-mannosamine transferase	Probable UDP-N-acetyl-D-mannosaminuronic acid transferase	Putative N-acetyl-mannosamine transferase	Glycosyl transferase, WecB/TagA/CpsF family	probable UDP-N-acetyl-D-mannosaminuronic acid transferase	Probable UDP-N-acetyl-D-mannosaminuronic acid transferase	Teichoic acid biosynthesis proteins	Lin2665 protein	Udp-n-acetyl-d-mannosamine transferase	Residues 1 to 246 of 246 are 99 pct identical to residues 1 to 246 of a 246 aa protein from Escherichia coli K12 ref: NP_418242.1 probable UDP-N-acetyl-D-mannosaminuronic acid transferase; synthesis of enterobacterial common antigen (ECA)	Probable UDP-N-acetyl-D-mannosaminuronic acid transferase	
ECOLI03669	Probable transport protein yifK	Probable transport protein yifK	Amino acid permease family protein	Amino acid permease	Amino acid permease	Probable transport protein yifK	identified by match to protein family HMM PF00324 alternate gene name: ybdP similar to amino	Probable amino acid permease	Putative amino acid/amine transport protein	Putative uncharacterized protein	Amino acid permease, gene yifK	Residues 1 to 415 of 417 are 99 pct identical to residues 1 to 415 of a 461 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290427.1 putative amino acid-amine transport protein	Putative permease protein	Transport protein	Probable transport protein YifK	Amino acid transport protein	identified by match to protein family HMM PF00324 amino acid permease	Transport protein	Molecular Function: amino acid-polyamine transporter activity (GO:0005279), Biological Process: amino acid transport (GO:0006865), Cellular Component: membrane (GO:0016020) Amino acid permease	IPR000169: Eukaryotic thiol (cysteine) protease; IPR002293: Amino acid/polyamine transporter, family I; IPR004840: Amino acid permease putative APC family, amino-acid transport protein, permease protein	similar to Salmonella typhi CT18 probable amino acid permease probable amino acid permease	hypothetical protein, similar to transport protein	Putative APC family amino acid permease	Ortholog of S. aureus MRSA252 (BX571856) SAR2400 putative amino acid permease	hypothetical protein, similar to transport protein	Probable transport protein yifK	go_component: plasma membrane [goid 0005886]; go_function: neutral amino acid transporter activity [goid 0015175]; go_function: amino acid permease activity [goid 0015359]; go_process: neutral amino acid transport [goid 0015804] amino acid transporter	amino acid permease	hypothetical protein, similar to amino-acid transporter protein	
ECOLI03670	Anaerobic sulfatase-maturating enzyme homolog aslB	Radical SAM domain protein	Arylsulfatase regulator	Anaerobic sulfatase-maturating enzyme	AslB/AtsB family protein	Putative arylsulfatase regulatory protein	AstB/chuR-related protein	Transcriptional regulator	Putative arylsulfatase Regulatory protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology CONSERVED HYPOTHETICAL PROTEIN	Putative arylsulfatase regulator	Residues 11 to 421 of 421 are 97 pct identical to residues 1 to 411 of a 411 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290428.1 putative arylsulfatase regulator	putative arylsulfatase regulatory protein	Code: R; COG: COG0641 putative arylsulfatase regulator	arylsulfatase regulator	Code: R; COG: COG0641 putative arylsulfatase regulator	arylsulfatase regulator (Fe-S oxidoreductase)	Putative arylsulfatase regulatory protein	Radical SAM domain protein	Putative arylsulfatase regulatory protein	Radical SAM domain protein PFAM: Radical SAM domain protein KEGG: mac:MA2647 arylsulfatase regulator	Putative arylsulfatase regulatory protein	arylsulfatase regulator	putative arylsulfatase regulator Code: R; COG: COG0641	putative regulator of arylsulfatase activity	Transcriptional regulator	Radical SAM	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03671	Arylsulfatase	Arylsulfatase	Arylsulfatase	Code: P; COG: COG3119 arylsulfatase	Arylsulfatase	Arylsulfatase	Sulfatase	arylsulfatase-like enzyme	Putative uncharacterized protein	Acrylsulfatase-like enzyme	Arylsulfatase	Sulfatase	Sulfatase precursor	Arylsulfatase	Arylsulfatase-like enzyme	Arylsulfatase-like enzyme	Arylsulfatase A	Arylsulfatase-like enzyme	Arylsulfatase-like enzyme	Acrylsulfatase-like enzyme	AslA protein	Acrylsulfatase-like enzyme	Acrylsulfatase-like enzyme	Acrylsulfatase-like enzyme	Sulfatase	
ECOLI03672	Protein hemY	Putative uncharacterized protein	HemY	Putative uncharacterized protein	Uncharacterized enzyme of heme biosynthesis	Porphyrin biosynthetic protein	Putative porphyrin biosynthesis related protein	hypothetical HemY protein	Protein hemY	HemY protein	Putative exported protein	Putative exported protein	HemY protein, putative	Porphyrin biosynthetic protein	HemY protein, putative	Putative exported protein	Putative uncharacterized protein	HemY protein	Protein hemY	HemY	Uncharacterized enzyme of heme biosynthesis	Residues 1 to 398 of 398 are 100 pct identical to residues 1 to 398 of a 398 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290430.1 a late step of protoheme IX synthesis	Putative protoheme IX biogenesis protein	Putative uncharacterized protein hemY	Putative uncharacterized protein hemY	HemY protein	protoporphyrinogen IX and coproporphyrinogen III oxidase HemY	conserved gene protoheme IX synthesis HemY	protoporphyrinogen IX and coproporphyrinogen III oxidase HemY	
ECOLI03673	Putative uroporphyrinogen-III C-methyltransferase	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized enzyme of heme biosynthesis	Uroporphyrinogen III methylase	hypothetical uroporphyrin-III C-methyltransferase	Putative uroporphyrin-III C-methyltransferase	Uroporphyrin-III C-methyltransferase, putative	Putative exported protein	Putative exported protein	HemX protein	Putative uroporphyrin-III C-methyltransferase	Uroporphyrin-III C-methyltransferase, putative	Putative exported protein	Putative uroporphyrin-III C-methyltransferase	Uroporphyrinogen III methylase	Uroporphyrin-III C-methyltransferase	Uncharacterized enzyme of heme biosynthesis	Residues 1 to 405 of 405 are 97 pct identical to residues 1 to 399 of a 399 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290431.1 uroporphyrinogen III methylase	Putative uroporphyrin-III C-methyltransferase	Possible uroporphyrin-III C-methyltransferase	Uroporphyrin-III C-methyltransferase	Similar to uroporphyrinogen III methylase HemX hypothetical protein	conserved gene uroporphyrinogen III methylase	Similar to uroporphyrinogen III methylase HemX hypothetical protein	Uroporphyrin-III C-methyltransferase	uroporphyrinogen III methylase	similar to Salmonella typhi CT18 uroporphyrinogen III methylase uroporphyrinogen III methylase	Putative uroporphyrin-III C-methyltransferase	
ECOLI03674	Uroporphyrinogen-III synthase	Uroporphyrinogen-III synthase	Uroporphyrinogen-III synthase	Uroporphyrinogen III synthase	hypothetical uroporphyrinogen III synthase	Uroporphyrinogen-III synthase	Uroporphyrinogen-III synthase	Uroporphyrinogen-III synthase	Uroporphyrinogen-III synthase	Uroporphyrinogen-III synthetase	Uroporphyrinogen-III synthase	Uroporphyrinogen III synthase	Uroporphyrinogen-III synthase	Uroporphyrinogen-III synthase	Residues 1 to 246 of 246 are 98 pct identical to residues 1 to 246 of a 246 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290432.1 uroporphyrinogen III synthase	Uroporphyrinogen-III synthase	Uroporphyrinogen III synthase HEM4	HemD protein	Uroporphyrinogen-III synthase	Uroporphyrinogen-III synthetase	conserved gene uroporphyrinogen III methylase	Uroporphyrinogen-III synthetase	porphyrin biosynthesis protein HemD	Uroporphyrinogen-III synthase	Uroporphyrinogen III synthase	uroporphyrinogen III synthase	similar to Salmonella typhi CT18 uroporphyrinogen III synthase uroporphyrinogen III synthase	Uroporphyrinogen-III synthase	uroporphyrinogen-III synthase	
ECOLI03675	Porphobilinogen deaminase	porphobilinogen deaminase;	Porphobilinogen deaminase, catalyzes the conversion of 4-porphobilinogen to hydroxymethylbilane, the third step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; expression is regulated by Hap2p- Hap3p. [Source:SGD;Acc:S000002364]	similar to sp|P28789 Saccharomyces cerevisiae YDL205c HEM3 porphobilinogen deaminase, start by similarity	Porphobilinogen deaminase	Porphobilinogen deaminase [Source:GeneDB_Spombe;Acc:SPAC24B11.13]	similar to sp|P28789 Saccharomyces cerevisiae YDL205c HEM3 porphobilinogen deaminase singleton, start by similarity	Porphobilinogen deaminase	Probable porphobilinogen deaminase	Probable porphobilinogen deaminase	Porphobilinogen deaminase	Probable porphobilinogen deaminase	Probable porphobilinogen deaminase	Porphobilinogen deaminase	Probable porphobilinogen deaminase	Porphobilinogen deaminase	Porphobilinogen deaminase	Probable porphobilinogen deaminase	Probable porphobilinogen deaminase	highly similar to uniprot|P28789 Saccharomyces cerevisiae YDL205c HEM3 porphobilinogen deaminase;	Probable porphobilinogen deaminase	DEHA2F08888p;similar to uniprot|P28789 Saccharomyces cerevisiae YDL205C HEM3 Phorphobilinogen deaminase catalyzes the conversion of 4-porphobilinogen to hydroxymethylbilane the third step in the heme biosynthetic pathway;	Probable porphobilinogen deaminase	Probable porphobilinogen deaminase	Probable porphobilinogen deaminase	Porphobilinogen deaminase	Porphobilinogen deaminase	Porphobilinogen deaminase	Probable porphobilinogen deaminase	
ECOLI03676	Adenylate cyclase	Adenylate cyclase	Adenylate cyclase	Adenylate cyclase	Adenylate cyclase	putative adenylate cyclase	Adenylate cyclase	Adenylate cyclase	Adenylate cyclase CyaA, putative	Adenylate cyclase	Adenylate cyclase, class I	Adenylate cyclase	Adenylate cyclase	Adenylate cyclase	Residues 1 to 848 of 848 are 99 pct identical to residues 1 to 848 of a 848 aa protein from Escherichia coli O157:H7 ref: NP_312763.1 adenylate cyclase	Adenylate cyclase	Adenylate cyclase	IPR000274: Adenylate cyclase, class-I adenylate cyclase	similar to Salmonella typhi CT18 adenylate cyclase adenylate cyclase	Adenylate cyclase	adenylate cyclase	ATP pyrophosphate-lyase; adenylyl cyclase; Similar to: HI0604, CYAA_HAEIN adenylate cyclase	Adenylate cyclase CyaA protein	Adenylate cyclase	Adenylate cyclase	adenylate cyclase	identified by similarity to SP:P00936; match to protein family HMM PF01295 adenylate cyclase, class I	identified by similarity to SP:P00936; match to protein family HMM PF01295 adenylate cyclase, class I	Adenylate cyclase	
ECOLI03677	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	putative CyaY protein	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	Residues 1 to 106 of 106 are 99 pct identical to residues 1 to 106 of a 106 aa protein from Escherichia coli K12 ref: NP_418251.1 orf, conserved hypothetical protein	Protein cyaY	Protein cyaY	Protein cyaY	Protein cyaY	IPR002908: Frataxin-like putative Frataxin family transport protein	similar to Salmonella typhi CT18 CyaY protein CyaY protein	
ECOLI03678	Putative uncharacterized protein b3808	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Predicted protein	
ECOLI03679	Uncharacterized lipoprotein yifL	Hypothetical lipoprotein yifL precursor	Putative lipoprotein	Uncharacterized lipoprotein yifL	Residues 1 to 67 of 67 are 100 pct identical to residues 1 to 67 of a 67 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290437.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Uncharacterized lipoprotein yifL	Code: N; COG: COG5567 Uncharacterized conserved protein	Code: N; COG: COG5567 Uncharacterized conserved protein	Putative uncharacterized protein	Hypothetical lipoprotein	Uncharacterized conserved protein Code: N; COG: COG5567	Putative outer membrane lipoprotein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Predicted lipoprotein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	Putative lipoprotein	
ECOLI03680	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	identified by match to PFAM protein family HMM PF01678 diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Putative diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase	Diaminopimelate epimerase 2	
ECOLI03681	Uncharacterized protein yigA	Putative uncharacterized protein	Putative uncharacterized protein VV0088	Putative uncharacterized protein STY3611	conserved hypothetical protein	Hypothetical protein yigA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2982	Putative uncharacterized protein yigA	Uncharacterized protein conserved in bacteria	Residues 1 to 235 of 235 are 99 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli K12 ref: NP_418255.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Similar to unknown protein YigA of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized BCR Hypothetical protein	Putative uncharacterized protein	Uncharacterized conserved protein, YigA-like	Uncharacterized protein yigA	identified by similarity to OMNI:SO4307; match to protein family HMM PF04340 conserved hypothetical protein	identified by match to protein family HMM PF04340 Protein of unknown function, DUF484 superfamily	identified by match to protein family HMM PF04340 Protein of unknown function, DUF484 superfamily	Protein of unknown function DUF484	
ECOLI03682	Tyrosine recombinase xerC	DNA integration/recombination/invertion protein	Site-specific recombinase, phage integrase family	Tyrosine recombinase xerC	Site-specific recombinase	Tyrosine recombinase xerC	Tyrosine recombinase xerC	Probable integrase/recombinase	Tyrosine recombinase xerC	Tyrosine recombinase xerC	Tyrosine recombinase xerC	Integrase-recombinase protein	Tyrosine recombinase xerC	Tyrosine recombinase xerC	Integrase/recombinase	Integrase/recombinase	putative integrase/recombinase XerC	Tyrosine recombinase xerC	Site-specific recombinase	Tyrosine recombinase xerC	integrase/recombinase	Tyrosine recombinase xerC	Putative integrase/recombinase	Tyrosine recombinase xerC	Integrase/recombinase	Tyrosine recombinase xerC	INTEGRASE-RECOMBINASE PROTEIN XERCD FAMILY	Integrase/recombinase XerC	Tyrosine recombinase xerC	
ECOLI03683	Uncharacterized protein yigB	Putative uncharacterized protein	Probable hydrolase	Predicted hydrolase	Putative uncharacterized protein STY3609	conserved hypothetical protein	Hypothetical protein yigB	Putative uncharacterized protein	HAD-superfamily hydrolase, subfamily IA, variant 1 family protein	Putative hydrolase	HAD-superfamily hydrolase	Putative uncharacterized protein VP2980	Putative phosphatase	BH2155 protein	Predicted hydrolase	Residues 1 to 238 of 238 are 100 pct identical to residues 1 to 238 of a 238 aa protein from Escherichia coli K12 ref: NP_418257.1 putative phosphatase	Putative haloacid dehalogenase-like hydrolase	YigB protein	Similar to unknown protein YigB of Escherichia coli	hydrolase, HAD superfamily	Predicted hydrolase of the HAD superfamily	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark hydrolase	putative hydrolase of the HAD superfamily	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Hydrolase	Putative haloacid dehalogenase-like hydrolase	Predicted hydrolases of the HAD superfamily Hypothetical protein	Hydrolase, haloacid dehalogenase-like family	Predicted phosphohydrolase, HAD superfamily	
ECOLI03684	DNA helicase II	DNA helicase II	ATP-dependent DNA helicase srs2 [Source:GeneDB_Spombe;Acc:SPAC4H3.05]	ATP-dependent DNA helicase pcrA	ATP-dependent DNA helicase PcrA, putative	DNA helicase II	Probable DNA helicase II homolog	similar to uniprot|Q12039 Saccharomyces cerevisiae YOL095c HMI1;	ATP-dependent DNA helicase	DNA helicase II	Putative ATP-dependent DNA helicase	ATP-dependent DNA helicase PcrA	UvrD/REP helicase	UvrD/REP helicase	ATP-dependent DNA helicase	ATP-dependent DNA helicase PcrA	DNA helicase II	Probable DNA helicase II homolog	UvrD	DNA helicase II	DNA helicase II	DNA helicase II	ATP-dependent DNA helicase pcrA	DNA helicase uvrD	DNA helicase II	DNA helicase II	DNA helicase II	ATP-dependent DNA helicase PcrA	ATP-dependent DNA helicase	
ECOLI03685	Uncharacterized protein yigE	Hypothetical protein	similar to GP:15074996; identified by sequence similarity; putative conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL LIPOPROTEIN SIGNAL PEPTIDE	Putative uncharacterized protein BMEI0362	Putative uncharacterized protein	hypothetical protein	identified by similarity to GB:CAC46553.1 conserved hypothetical protein	Putative uncharacterized protein	similar to BR1669, Conserved hypothetical protein Conserved hypothetical protein	pseudo conserved hypothetical protein	hypothetical protein	conserved hypothetical protein	periplasmic protein-like	Code: S; COG: COG3698 Predicted periplasmic protein	conserved hypothetical exported protein similarity:fasta; with=UniProt:Q8FZ30_BRUSU (EMBL:AE014291); Brucella suis.; Hypothetical protein.; length=256; id 59.302; 258 aa overlap; query 1-258; subject 1-256	conserved hypothetical protein KEGG: sil:SPO3836 hypothetical protein, ev=1e-88, 68% identity	hypothetical conserved protein similar to BMEI0362 [Brucella melitensis] and AGR_C_3235p [Agrobacterium tumefaciens] Similar to swissprot:Q8YIT0 Putative location:bacterial cytoplasm Psort-Score: 0.1053	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein KEGG: rsp:RSP_1107 hypothetical protein	conserved hypothetical protein	conserved hypothetical protein KEGG: rsp:RSP_1107 hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	
ECOLI03686	Magnesium transport protein corA	Magnesium and cobalt transport protein CorA	Magnesium transport protein corA	Mg(2+) and Co(2+) transport protein	Magnesium and cobalt transport protein CorA	Magnesium transport protein corA	Magnesium/cobalt transport protein	Magnesium transport protein corA	Magnesium/cobalt transport protein	Putative magnesium and cobalt transport protein	Magnesium transport protein corA	similar to GP:15620053; identified by sequence similarity; putative transporter, CorA family	Magnesium and cobalt transport protein CorA	Magnesium transport protein corA	Magnesium transport protein corA	MAGNESIUM AND COBALT TRANSPORT PROTEIN CORA	Magnesium transport protein corA	magnesium/cobalt transport protein	Putative magnesium/cobalt transport protein	Residues 6 to 321 of 321 are 100 pct identical to residues 1 to 316 of a 316 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290445.1 Mg2+ transport, system I	Magnesium transport protein corA	Magnesium transport protein corA	Probable magnesium and cobalt transport transmembrane protein	Magnesium transport protein corA	identified by similarity to SP:P27841; match to protein family HMM PF01544; match to protein family HMM TIGR00383 magnesium and cobalt transport protein CorA	Magnesium and cobalt transport protein CorA	Magnesium transport protein corA	Magnesium transport protein corA	similar to BR0559, transporter, CorA family transporter	
ECOLI03687	Uncharacterized protein yigF	Uncharacterized protein yigF	Putative uncharacterized protein	Residues 15 to 140 of 140 are 99 pct identical to residues 1 to 126 of a 126 aa protein from Escherichia coli K12 ref: NP_418261.1 orf, conserved hypothetical protein	Uncharacterized protein yigF	conserved hypothetical protein	putative membrane protein	conserved hypothetical protein; putative membrane protein Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative transmembrane protein	Conserved inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yigF	Putative uncharacterized protein yigF	YigF protein	Conserved inner membrane protein	Conserved inner membrane protein	
ECOLI03688	Inner membrane protein yigG	Residues 9 to 146 of 146 are 95 pct identical to residues 1 to 138 of a 138 aa protein from Escherichia coli K12 ref: NP_418262.1 orf, conserved hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	Predicted inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein yigG	pseudo	Predicted inner membrane protein	
ECOLI03689	Protein rarD	RarD protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical membrane protein	RarD protein	Uncharacterized transporter PA0485	RarD protein	Putative uncharacterized protein	Protein rarD	RarD protein	Lmo0795 protein	Predicted permeases	Chloramphenicol-sensitive protein rarD	Possible chloramphenicol-sensitive RarD protein	putative RarD	Protein rarD	identified by match to protein family HMM PF00892; match to protein family HMM TIGR00688 rarD protein	identified by match to PFAM protein family HMM PF03845 rarD protein	RarD protein	Uncharacterized transporter VC_0195	Putative membrane protein	Putative membrane protein	RarD protein	Putative membrane protein	PMID: 10952301 best DB hits: BLAST: pir:D82351; rarD protein VC0195 [imported] - Vibrio cholerae (group; E=4e-38 embl:CAC08293.1; (AL392148) putative integral membrane protein; E=1e-36 gb:AAG59015.1; AE005613_8 (AE005613) orf, hypothetical protein; E=1e-35 COG: VC0195; COG2962 Predicted permeases; E=3e-39 PFAM: PF00892; Integral membrane protein DUF6; E=5.7e-12 RarD protein (chloramphenicol resistance)	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	RarD protein	Putative membrane protein	
ECOLI03690	Uncharacterized protein yigI	Uncharacterized protein yigI	Hypothetical protein yigI	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yigI	Residues 1 to 161 of 161 are 100 pct identical to residues 1 to 161 of a 161 aa protein from Escherichia coli O157:H7 ref: NP_312777.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YigI of Escherichia coli	IPR003736: Phenylacetic acid degradation-related protein; IPR006683: Thioesterase superfamily putative protein PaaI, possibly involved in aromatic compounds catabolism	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	Thioesterase (4HBT) superfamily enzyme	Uncharacterized protein yigI	Phenylacetic acid degradation-related protein	conserved hypothetical protein	Code: Q; COG: COG2050 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: Q; COG: COG2050 conserved hypothetical protein	Phenylacetic acid degradation-related protein	conserved hypothetical protein	uncharacterized protein, possibly involved in aromatic compounds catabolism COG2050	Code: Q; COG: COG2050; orf conserved hypothetical protein	Putative uncharacterized protein	Phenylacetic acid degradation-related protein	Uncharacterized domain 1	Hypothetical protein	Uncharacterized domain 1	
ECOLI03691	Phospholipase A1	Phospholipase A	Outer membrane phospholipase A	Phospholipase A1	putative outer membrane phospholipase A precursor	Phospholipase A1	Phospholipase A1	Phospholipase A1	Outer membrane phospholipase A	Residues 1 to 289 of 289 are 100 pct identical to residues 1 to 289 of a 289 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290453.1 outer membrane phospholipase A	Phospholipase A	identified by similarity to GP:2243138; match to protein family HMM PF02253 phospholipase A	IPR003187: Phospholipase A1 outer membrane phospholipase A	similar to Salmonella typhi CT18 detergent-resistant phospholipase A detergent-resistant phospholipase A	Phospholipase A	Phospholipase A	phospholipase A1	Outer membrane phospholipase A	Phospholipase A1	identified by similarity to SP:P00631; match to protein family HMM PF02253 phospholipase A1	Phospholipase A1	Code: M; COG: COG2829 outer membrane phospholipase A	Code: M; COG: COG2829 outer membrane phospholipase A	outer membrane phospholipase A	Phospholipase A1	Outer membrane phospholipase A COG2829	Code: M; COG: COG2829 outer membrane phospholipase A	Phospholipase A1	Phospholipase A1 precursor	
ECOLI03692	ATP-dependent DNA helicase recQ	ATP-dependent DNA helicase recQ	ATP-dependent DNA helicase	ATP-dependent DNA helicase RecQ	ATP-dependent DNA helicase	DNA helicase RecQ	DNA helicase	ATP-DEPENDENT DNA HELICASE;07_1130, ATP-DEPENDENT DNA HELICASE, HUS2_SCHPO, SGS1_yeast, gene found by Glimmer;	ATP-dependent DNA helicase recQ	similar to uniprot|P35187 Saccharomyces cerevisiae YMR190c SGS1 DNA helicase;	ATP-dependent DNA helicase recQ	ATP-dependent DNA helicase RecQ	Putative ATP-dependent DNA helicase	ATP-dependent DNA helicase	ATP-dependent DNA helicase RecQ	ATP-dependent DNA helicase RecQ	ATP-dependent DNA helicase RecQ	ATP-dependent DNA helicase recQ	ATP-dependent DNA helicase RecQ	ATP-dependent DNA helicase RecQ	DNA helicase RecQ	DNA helicase RecQ	ATP-dependent DNA helicase	ATP-dependent DNA helicase	ATP-dependent DNA helicase	ATP-dependent DNA helicase RecQ	Lmo2757 protein	ATP-dependent DNA helicase RecQ	ATP-dependent DNA helicase recQ	
ECOLI03693	Threonine efflux protein	Threonine efflux protein	Hypothetical protein	Threonine efflux protein	Threonine efflux protein, putative	Putative LysE type translocator	Threonine efflux protein	Residues 1 to 206 of 206 are 99 pct identical to residues 1 to 206 of a 206 aa protein from Escherichia coli O157:H7 ref: NP_312780.1 threonine efflux protein	Threonine efflux protein	IPR001123: Lysine exporter protein (LYSE/YGGA) RhtB family, threonine efflux protein	similar to Salmonella typhi CT18 threonine efflux protein threonine efflux protein	Threonine efflux protein	Putative threonine efflux protein RhtB protein	Similar Q8DDM9 to Putative threonine efflux protein from Vibrio vulnificus (223 aa). FASTA: opt: 310 Z-score: 386.3 E(): 1.1e-13 Smith-Waterman score: 310; 29.577 identity in 213 aa overlap threonine efflux protein	Threonine efflux protein	Lysine exporter protein (LYSE/YGGA)	Putative threonine efflux protein	threonine efflux transport protein	Lysine exporter protein (LYSE/YGGA) precursor	LysE type translocator identified by match to protein family HMM PF01810	Putative LysE type translocator	Threonine efflux protein	threonine efflux protein Similar Q8DDM9 to Putative threonine efflux protein from Vibrio vulnificus (223 aa). FASTA: opt: 310 Z-score: 386.3 E(): 1.1e-13 Smith-Waterman score: 310; 29.577 identity in 213 aa overlap	Putative uncharacterized protein	Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA) KEGG: bur:Bcep18194_B2617 lysine exporter family protein (LysE/YggA)	Lysine exporter protein (LYSE/YGGA)	Threonine efflux protein	Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA) KEGG: bcn:Bcen_3086 lysine exporter protein (LysE/YggA)	Amino acid efflux pump, RhtB family, LysE superfamily	
ECOLI03694	Homoserine/homoserine lactone efflux protein	Putative threonine efflux protein	Homoserine/homoserine lactone efflux protein	conserved hypothetical protein	Homoserine/homoserine lactone efflux protein	Putative uncharacterized protein	Homoserine/homoserine lactone efflux protein	Homoserine/homoserine lactone efflux protein	Homoserine/homoserine lactone efflux protein	Putative threonine efflux protein	Residues 1 to 206 of 206 are 100 pct identical to residues 1 to 206 of a 206 aa protein from Escherichia coli O157:H7 ref: NP_312781.1 homoserine-homoserine lactone effulux protein	Putative homoserine/homoserine lactone efflux protein	IPR001123: Lysine exporter protein (LYSE/YGGA) homoserine/homoserine lactone efflux protein	similar to Salmonella typhi Ty2 homoserine/homoserine lactone efflux protein homoserine/homoserine lactone efflux protein	RhtB/LysE family homoserine/homoserine lactone efflux pump RhtB	Transporter, LysE family	Homoserine/homoserine lactone efflux protein	identified by match to protein family HMM PF01810 homoserine/homoserine lactone efflux protein	Lysine exporter protein (LYSE/YGGA)	Lysine exporter protein (LYSE/YGGA)	Code: E; COG: COG1280 conserved hypothetical protein	Code: E; COG: COG1280 conserved hypothetical protein	putative amino acid efflux protein	Lysine exporter protein (LYSE/YGGA)	Code: E; COG: COG1280; orf conserved hypothetical protein	Putative LysE type translocator	Putative homoserine/homoserine lactone efflux protein precursor	Lysine exporter protein (LYSE/YGGA)	Lysine exporter protein	
ECOLI03695	Lysophospholipase L2	Probable lysophospholipase L2	Putative uncharacterized protein	Lysophospholipase	Lysophospholipase L2	PldB	Lysophospholipase	Lysophospholipase L2	Lysophospholipase L2	similar to GB:X15949, SP:P14316, and PID:33967; identified by sequence similarity; putative lysophospholipase L2, putative	LypA	Lysophospholipase L2	Lysophospholipase L2	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE LYSOPHOSPHOLIPASE L2 PROTEIN	LYSOPHOSPHOLIPASE L2	Lysophospholipase L2	Lysophospholipase L(2)	lysophospholipase L2	Putative lysophospholipase L2	Lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily	Lysophospholipase	Residues 1 to 340 of 340 are 99 pct identical to residues 1 to 340 of a 340 aa protein from Escherichia coli emb: CAA26932.1 lysophospholipase L2 (aa 1-340)	Putative lysophospholipase	Lysophospholipase L2	identified by match to protein family HMM PF00561 hydrolase, alpha/beta fold family	Lysophospholipase L2 protein	IPR000379: Esterase/lipase/thioesterase lysophospholipase L(2)	similar to Salmonella typhi CT18 lysophospholipase L2 lysophospholipase L2	similar to BRA0046, lysophospholipase L2, hypothetical hypothetical lysophospholipase L2	
ECOLI03696	Uncharacterized protein yigL	Uncharacterized protein MPN_427	Uncharacterized protein HI0597	Predicted hydrolase	Putative uncharacterized protein yigL	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein VP2975	Uncharacterized protein yigL	Predicted hydrolase of the HAD superfamily	Residues 1 to 287 of 287 are 99 pct identical to residues 19 to 305 of a 305 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290458.1 orf, conserved hypothetical protein	Putative haloacid dehalogenase-like hydrolase	Similar to unknown protein YigL of Escherichia coli	Predicted hydrolase of the HAD superfamily	IPR000150: Cof protein putative hydrolase of the HAD superfamily	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative haloacid dehalogenase-like hydrolase	Hypothetical protein	hydrolase (HAD superfamily)	Predicted hydrolases of the HAD superfamily Cof protein	Putative hydrolase of the HAD superfamily	ortholog to Escherichia coli bnum: b3826 putative hydrolase of the HAD superfamily	Code: R; COG: COG0561 conserved hypothetical protein	Predicted hydrolase (HAD superfamily); Code: R; COG: COG0561 YigL	conserved hypothetical protein	Code: R; COG: COG0561; orf conserved hypothetical protein	Cof protein	Putative hydrolase of the HAD superfamily	Putative haloacid dehalogenase-like hydrolase	
ECOLI03698	HTH-type transcriptional regulator metR	Transcriptional regulator, LysR family, putative	Transcriptional regulator, LysR family	Transcriptional regulator MetR	Transcriptional activator MetR	HTH-type transcriptional regulator metR	Transcriptional activator protein metR	Transcriptional activator MetR	Transcriptional regulatory protein	Transcriptional regulatory protein	Transcriptional activator protein MetR	Transcriptional activator protein	HTH-type transcriptional regulator metR	Transcriptional activator MetR	Transcriptional regulatory protein	Transcriptional activator MetR	HTH-type transcriptional regulator metR	MetR	Residues 1 to 317 of 317 are 100 pct identical to residues 1 to 317 of a 317 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290460.1 regulator for metE and metH	LysR-family transcriptional regulatory protein	Bacterial regulatory protein, LysR family	Putative transcriptional activator metr transcription regulator protein	identified by similarity to SP:P19797; match to protein family HMM PF00126; match to protein family HMM PF03466 transcriptional regulator MetR	Transcriptional activator protein	IPR000847: Bacterial regulatory protein LysR, HTH motif regulator for metE and metH (LysR family)	similar to Salmonella typhi CT18 trans-activator of metE and metH trans-activator of metE and metH	LysR-family transcriptional regulatory protein	Putative transcriptional activator protein METR	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator transcriptional regulator	
ECOLI03697	Uncharacterized membrane protein yigM	Uncharacterized membrane protein PA3474	MadN protein	Transporter	Uncharacterized membrane protein yigM	putative MadN protein	Hypothetical membrane protein yigM	identified by match to protein family HMM PF00892 membrane protein, putative	MadN protein	Putative membrane protein	Membrane protein, putative	MadN protein	Uncharacterized membrane protein yigM	CDS_ID OB0608 hypothetical protein	Permease of the drug/metabolite transporter (DMT) superfamily	Residues 1 to 299 of 299 are 99 pct identical to residues 1 to 299 of a 299 aa protein from Escherichia coli pir: S30717 orf, conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein TTHA0012	paral putative transport protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative acetate efflux pump, MadN	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative membrane protein	transporter, drug/metabolite exporter family	Carboxylate/amino acid/amine transporter, putative	Malonate decarboxylase Na+ pump	Uncharacterized membrane protein yigM	identified by match to protein family HMM PF00892 putative membrane protein	identified by match to protein family HMM PF00892 carboxylate/amino acid/amine transporter, putative	identified by match to protein family HMM PF00892 carboxylate/amino acid/amine transporter, putative	
ECOLI03699	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	Cobalamin-independent methionine synthase, involved in amino acid biosynthesis; requires a minimum of two glutamates on the methyltetrahydrofolate substrate, similar to bacterial metE homologs. [Source:SGD;Acc:S000000893]	highly similar to sp|P05694 Saccharomyces cerevisiae YER091c MET6 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, start by similarity	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	highly similar to sp|P05694 Saccharomyces cerevisiae YER091c MET6 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase singleton, start by similarity	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	highly similar to uniprot|P05694 Saccharomyces cerevisiae YER091c MET6;	DEHA2A07414p;highly similar to uniprot|P05694 Saccharomyces cerevisiae YER091c MET6 5- methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	putative 5-Methyltetrahydropteroyltriglutamate-homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	
ECOLI03700	Putative carboxymethylenebutenolidase	Putative carboxymethylenebutenolidase	Dienelactone hydrolase family protein	Putative carboxymethylenebutenolidase	Alr1362 protein	Putative carboxymethylenebutenolidase	Putative carboxymethylenebutenolidase	Putative carboxymethylenebutenolidase	probable carboxymethylenebutenolidase	Carboxymethylenebutenolidase	Putative carboxymethylenebutenolidase	Residues 1 to 293 of 293 are 98 pct identical to residues 1 to 293 of a 293 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290462.1 putative enzyme	Putative carboxymethylenebutenolidase	Putative dienelactone hydrolase;twin-arginine translocation pathway signal protein	carboxymethylenebutenolidase	Probable carboxymethylenebutenolidase	putative dienelactone hydrolase family	similar to Salmonella typhi Ty2 putative hydrolase putative hydrolase	Putative carboxymethylenebutenolidase	Putative carboxymethylenebutenolidase	Twin-arginine translocation pathway signal	Twin-arginine translocation pathway signal	Code: Q; COG: COG0412 putative hydrolase	Code: Q; COG: COG0412 putative enzyme	Twin-arginine translocation pathway signal	putative carboxymethylenebutenolidase	Dienelactone hydrolase	Code: Q; COG: COG0412 putative enzyme	
ECOLI03701	Uridine phosphorylase	Uridine phosphorylase	Uridine phosphorylase	Uridine phosphorylase	Uridine phosphorylase	Purine nucleoside phosphorylase II	Probable uridine phosphorylase	Udp	Uridine phosphorylase	Uridine phosphorylase	Purine nucleoside phosphorylase II	Putative uridine phosphorylase	Uridine phosphorylase	uridine phosphorylase	Uridine phosphorylase	Uridine phosphorylase	Uridine phosphorylase	Uridine phosphorylase	Phosphorylase family protein	Uridine phosphorylase	Uridine phosphorylase	Uridine phosphorylase	Residues 3 to 255 of 255 are 99 pct identical to residues 1 to 253 of a 253 aa protein from Escherichia coli K12 ref: NP_418275.1 uridine phosphorylase	Uridine phosphorylase	uridine phosphorylase	Uridine phosphorylase	Similar to purine nucleoside phosphorylase proteins hypothetical protein	conserved gene purine nucleoside phosphorylase II	
ECOLI03702	DNA recombination protein rmuC	DNA recombination protein rmuC homolog	Putative uncharacterized protein	DNA recombination protein rmuC homolog	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	DNA recombination protein rmuC homolog	DNA recombination protein rmuC homolog	DNA recombination protein rmuC homolog	DNA recombination protein rmuC homolog	Putative uncharacterized protein VV0176	Putative uncharacterized protein	DNA recombination protein rmuC	Putative exported protein	Putative uncharacterized protein	conserved hypothetical protein	DNA recombination protein rmuC homolog	DNA recombination protein rmuC	DNA recombination protein rmuC	similar to GP:14024818; identified by sequence similarity; putative conserved hypothetical protein	RmuC domain protein	DNA recombination protein rmuC homolog	DNA recombination protein rmuC homolog	Conserved hypothetical lipoprotein	Conserved hypothetical lipoprotein	Putative uncharacterized protein	DNA recombination protein	Putative uncharacterized protein	
ECOLI03703	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE	ubiquinone biosynthesis methyltransferase COQ5;	2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase, involved in ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with other ubiquinone biosynthetic enzymes.  [Source:SGD;Acc:S000004578]	highly similar to sp|P49017 Saccharomyces cerevisiae YML110c DBI56 Ubiquinone biosynthesis methyltransferase COQ5 (EC 2.1.1.-), start by similarity	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE	Ubiquinone biosynthesis methyltransferase coq5, mitochondrial [Source:GeneDB_Spombe;Acc:SPCC4G3.04c]	similar to sp|P49017 Saccharomyces cerevisiae YML110c DBI56 ubiquinone biosynthesis, methyltransferase singleton, start by similarity	Ubiquinone/menaquinone biosynthesis methyltransferase UBIE	Methyltransferase	Ubiquinone/menaquinone biosynthesis methyltransferase	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE	Menaquinone biosynthesis methyltransferase ubiE	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE	highly similar to uniprot|P49017 Saccharomyces cerevisiae YML110c DBI56 ubiquinone biosynthesis;	DEHA2D11022p;similar to uniprot|P49017 Saccharomyces cerevisiae YML110C COQ5 Ubiquinone biosynthesis methyltransferase;	Putative uncharacterized protein TVG1083723	identified by match to PFAM protein family HMM PF01209 ubiquinone/menaquinone biosynthesis methyltransferase	Menaquinone biosynthesis methyltransferase ubiE	Menaquinone biosynthesis methyltransferase ubiE	Menaquinone biosynthesis methyltransferase ubiE	Possible menaquinone biosynthesis methyltransferase	Ubiquinone/menaquinone methyltransferase related protein	Putative uncharacterized protein	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE	
ECOLI03704	Uncharacterized protein yigP	Putative uncharacterized protein VV0178	Putative uncharacterized protein STY3588	conserved hypothetical protein	Hypothetical protein yigP	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP0096	Putative uncharacterized protein yigP	Putative uncharacterized protein	Residues 16 to 216 of 216 are 100 pct identical to residues 1 to 201 of a 201 aa protein from Escherichia coli K12 ref: NP_418278.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YigP of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Uncharacterized conserved membrane protein	Putative inner membrane protein	conserved hypothetical protein	identified by match to protein family HMM PF06843 Protein of unknown function (DUF1243) superfamily	identified by match to protein family HMM PF06843 conserved hypothetical protein	Protein of unknown function DUF1243	Code: S; COG: COG3165 conserved hypothetical protein	Protein of unknown function DUF1243	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy putative protein with ubiquinone carrier domain, SCP-like	
ECOLI03705	Probable ubiquinone biosynthesis protein ubiB	Probable ubiquinone biosynthesis protein ubiB	Vng1770c	Ubiquione biosynthesis protein	Ubiquinone biosynthesis protein AarF, putative	Ubiquinone biosynthesis protein	Probable ubiquinone biosynthesis protein ubiB	Probable ubiquinone biosynthesis protein ubiB	Probable ubiquinone biosynthesis protein ubiB	Probable ubiquinone biosynthesis protein ubiB	Probable ubiquinone biosynthesis protein ubiB	ABC1 family protein	Probable ubiquinone biosynthesis protein ubiB	Ubiquinone biosynthesis protein AarF, putative	putative ubiquinone biosynthesis	Probable ubiquinone biosynthesis protein ubiB	identified by match to PFAM protein family HMM PF00069 ubiquinone biosynthesis protein UbiB	Probable ubiquinone biosynthesis protein ubiB	Ubiquinone biosynthesis protein	Probable ubiquinone biosynthesis protein	Probable ubiquinone biosynthesis protein	Ubiquinone biosynthesis protein AarF	Probable ubiquinone biosynthesis protein ubiB	Probable ubiquinone biosynthesis protein ubiB	Probable ubiquinone biosynthesis protein	ABC transporter	Putative ATP-binding protein	Probable ubiquinone biosynthesis protein ubiB	UBIQUINONE BIOSYNTHESIS PROTEIN AARF	
ECOLI03706	Sec-independent protein translocase protein tatA	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA	putative TatA protein	Twin-arginine-dependent translocase protein	Sec-independent protein translocase protein tatA	identified by match to PFAM protein family HMM PF02416 Sec-independent protein translocase protein TatA, putative	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA	Sec-independent protein translocase protein tatA/E homolog	Residues 1 to 103 of 103 are 100 pct identical to residues 1 to 103 of a 103 aa protein from Escherichia coli K12 ref: NP_418280.1 orf, conserved hypothetical protein	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA/E homolog	Sec-independent protein translocase protein tatA/E homolog	component of Sec-independent protein secretion pathway	similar to Salmonella typhi CT18 sec-independent protein translocase protein sec-independent protein translocase protein	similar to BR0882, Sec-independent protein translocase protein TatA, hypothetical Sec-independent protein translocase protein TatA, hypothetical	Sec-independent protein translocase protein TatA	Similar to: TATA_HAEIN Sec-independent protein translocase protein TatA/E	Sec-independent protein translocase protein tatA	identified by similarity to SP:P25895; match to protein family HMM PF02416; match to protein family HMM TIGR01411 Sec-independent protein translocase protein TatA	Twin-arginine translocation protein TatA/E	Code: U; COG: COG1826 conserved hypothetical protein	
ECOLI03707	Sec-independent protein translocase protein tatB	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB	Sec-independent protein translocase protein tatB	similar to GP:15156801; identified by sequence similarity; putative mttA/Hcf106 family protein	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB homolog	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE SEC-INDEPENDENT TRANSLOCASE TRANSMEMBRANE PROTEIN	Sec-independent protein translocase TatB	Sec-independent protein translocase protein tatB homolog	Putative uncharacterized protein	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB	Residues 1 to 171 of 171 are 99 pct identical to residues 1 to 171 of a 171 aa protein from Escherichia coli O157:H7 ref: NP_312794.1 Sec-independent protein translocase	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein TatB	SEC-independent protein translocase protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark sec-independent protein translocase	IPR003998: Twin-arginine translocation protein TatB component of Sec-independent protein secretion pathway	similar to Salmonella typhi CT18 sec-independent protein translocase protein sec-independent protein translocase protein	similar to BR0883, mttA/Hcf106 family protein mttA/Hcf106 family protein	Sec-independent protein translocase protein tatB homolog	Sec-independent protein translocase protein tatB homolog	
ECOLI03708	Sec-independent protein translocase protein tatC	MttB family protein	Membrane protein	SEC-independent protein translocase	Uncharacterized protein sll0194	Sec-independent protein translocase	Putative uncharacterized protein	Protein export	Putative uncharacterized protein TVG0363970	Sec-independent protein translocase protein TatC, putative	Putative sec-independent protein translocase protein TatC	Uncharacterized protein aq_1267	Protein secretion component, Tat family	Conserved hypothetical membrane protein	hypothetical protein	Sec-independent protein translocase protein TatC	Protein secretion component, Tat family	Putative uncharacterized protein	TatC	Transport protein TatC	Sec-independent protein translocase protein tatC homolog	Sec-independent protein secretion pathway component TatC	Sec-independent protein translocase protein TatC, putative	Sec-independent protein translocase protein tatC	Sec-independent protein translocase protein tatC	Sec-independent protein translocase protein	TatCD protein	Related to Sec-independent protein translocase protein TatC	Lmo0361 protein	
ECOLI03710	Transcriptional activator rfaH	Transcription antiterminator	Transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin	Transcriptional activator	putative transcriptional activator RfaH	Transcriptional activator rfaH	Transcriptional activator RfaH, putative	Transcriptional activator rfaH, putative	Transcriptional activator	Transcriptional activator RfaH	Putative transcriptional activator RfaH	Transcriptional activator rfaH	Transcriptional activator	Transcription antiterminator	Transcription activator or transcription antitermination factor	Residues 1 to 162 of 162 are 98 pct identical to residues 1 to 162 of a 162 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290472.1 transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin	Putative regulatory protein	Putative transcriptional activator	Transcriptional activator RfaH	transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin	similar to Salmonella typhi CT18 transcriptional activator transcriptional activator	Putative regulatory protein	transcriptional activator RfaH	Transcription antiterminator RfaH	Transcriptional activator	Transcriptional activator RfaH, NusG family	identified by match to protein family HMM TIGR01955 transcriptional activator RfaH	identified by match to protein family HMM TIGR01955 transcriptional activator RfaH	Transcriptional activator RfaH	
ECOLI03709	Deoxyribonuclease tatD	Type V secretory pathway protein	Type V secretory pathway protein	similarity to putative DEOXYRIBONUCLEASE OF THE TATD FAMILY;03_0200, similarity to putative DEOXYRIBONUCLEASE OF THE TATD FAMILY, TATD_ECOLI, YBF5_yeast, gene found by Glimmer;	Secretion protein MttC	Putative deoxyribonuclease	putative tatD gene product	Hypothetical protein yigW	Hydrolase, TatD family	Deoxyribonuclease	Hydrolase, TatD family	Putative uncharacterized protein tatD	Residues 1 to 264 of 264 are 99 pct identical to residues 1 to 264 of a 264 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290471.1 tatD gene product	Type V secretory pathway protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark type V secretory pathway protein	IPR001130: TatD-related deoxyribonuclease putative hydrolase of PHP superfamily	similar to Salmonella typhi Ty2 putative deoxyribonuclease putative deoxyribonuclease	Type V secretory pathway protein	Cytoplasmic Dnase	Hydrolase, TatD family	Mg-dependent DNase	Putative hydrolase of PHP superfamily	type V secretory pathway protein	identified by similarity to SP:P27859; match to protein family HMM PF01026 deoxyribonuclease TatD	identified by similarity to SP:P27859; match to protein family HMM PF01026 deoxyribonuclease TatD	identified by similarity to SP:P27859; match to protein family HMM PF01026 deoxyribonuclease TatD	TatD-related deoxyribonuclease	TatD-related deoxyribonuclease	
ECOLI03711	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein sll0936	Hypothetical protein APE1571	Uncharacterized protein AF_0209	Putative uncharacterized protein TVG0397730	Putative decarboxylase	Uncharacterized protein aq_1612	Putative uncharacterized protein	4-hydroxybenzoate decarboxylase related protein	hypothetical protein	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	Putative uncharacterized protein	Putative uncharacterized protein	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	Putative 3-octaprenyl-4-hydroxybenzoate carboxy- lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	Putative uncharacterized protein	VdcC protein	Putative uncharacterized protein	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	Alr1108 protein	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	putative 3-polyprenyl-4-hydroxybenzoate decarboxylase	
ECOLI03712	NAD(P)H-flavin reductase	Probable aromatic hydrocarbon reductase	NAD(P)H-flavin reductase	Flavin reductase	putative NAD(P)H-flavin reductase	NAD(P)H-flavin reductase	NAD(P)H-flavin reductase	NAD(P)H-flavin reductase	NAD(P)H-flavin reductase	Oxidoreductase, iron-sulfur-binding	NAD(P)H-flavin reductase	NAD(P)H-flavin reductase	NAD(P)H-flavin reductase	Residues 12 to 244 of 244 are 98 pct identical to residues 1 to 233 of a 233 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290474.1 ferrisiderophore reductase; flavin reductase (NADPH:flavin oxidoreductase)	NAD(P)H-flavin reductase	NAD(P)H-flavin reductase	Similar to C-terminal part of NAD(P)H-flavin reductase hypothetical protein	conserved gene CDP-6-deoxy-3,4-glucoseen reductase	Similar to C-terminal part of NAD(P)H-flavin reductase hypothetical protein	IPR001221: Phenol hydroxylase reductase FMN reductase	similar to Salmonella typhi CT18 flavin reductase flavin reductase	NAD(P)H-flavin reductase	NAD(P)H-dependent FMN reductase	Oxidoreductase, iron-sulfur-binding	2-polyprenylphenol hydroxylase	NAD(P)H-flavin reductase	identified by match to protein family HMM PF00175 oxidoreductase, NAD-binding	identified by match to protein family HMM PF00111; match to protein family HMM PF00175 oxidoreductase, iron-sulfur-binding	identified by match to protein family HMM PF00111; match to protein family HMM PF00175 oxidoreductase, iron-sulfur-binding	
ECOLI03713	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	Putative Acetyl-CoA acetyltransferase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	Residues 1 to 387 of 387 are 99 pct identical to residues 1 to 387 of a 387 aa protein from Escherichia coli gb: AAA23751.1 fatty acid oxidizing complex	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	IPR001412: Aminoacyl-tRNA synthetase, class I; IPR002155: Thiolase 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 23.1.16 reaction	similar to Salmonella typhi CT18 small (beta) subunit of the fatty acid-oxidizing multienzyme complex small (beta) subunit of the fatty acid-oxidizing multienzyme complex	3-ketoacyl-CoA thiolase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme 3-ketoacyl-CoA thiolase (Fatty oxidation complex beta subunit) (Beta-ketothiolase) (Acetyl-CoA acyltransferase)	3-ketoacyl-CoA thiolase	3-ketoacyl-CoA thiolase	Acetyl-CoA acetyltransferase	3-ketoacyl-CoA thiolase	identified by similarity to SP:P21151; match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; match to protein family HMM TIGR02445 fatty oxidation complex, beta subunit	identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; match to protein family HMM TIGR02445 acetyl-CoA C-acyltransferase FadA	identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; match to protein family HMM TIGR02445 3-ketoacyl-coa thiolase	Thiolase	Thiolase	3-ketoacyl-CoA thiolase; acetyl-CoA transferase; Code: I; COG: COG0183 thiolase I	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8446033; Product type e : enzyme 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 2.3.1.16	
ECOLI03714	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Putative fatty oxidation complex, alpha subunit	Fatty oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex subunit alpha	Residues 43 to 771 of 771 are 99 pct identical to residues 1 to 729 of a 729 aa protein from Escherichia coli K12 ref: NP_418288.1 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase	Fatty acid oxidation complex subunit alpha	IPR001753: Enoyl-CoA hydratase/isomerase; IPR006108: 3-hydroxyacyl-CoA dehydrogenase, C-terminal; IPR006176: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain;IPR006180: 3-hydroxyacyl-CoA dehydrogenase 3-hydroxyacyl-coA dehydrogenase of 4-enzyme FadB protein	similar to Salmonella typhi CT18 large (alpha) subunit of the fatty acid-oxidizing multienzyme complex large (alpha) subunit of the fatty acid-oxidizing multienzyme complex	Fatty acid oxidation complex subunit alpha	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme fatty oxidation complex alpha subunit [Includes: Enoyl-CoA hydratase ; Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase ; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase]	delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase enoyl-CoA hydratase	Fatty acid oxidation complex subunit alpha	Fatty acid oxidation complex alpha subunit	Fatty acid oxidation complex subunit alpha	identified by similarity to SP:P21177; match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; match to protein family HMM TIGR02437 fatty oxidation complex, alpha subunit	identified by similarity to SP:P21177; match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; match to protein family HMM TIGR02437 fatty oxidation complex, alpha subunit FadB	identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; match to protein family HMM TIGR02437 fatty oxidation complex, alpha subunit FadB	Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase, C-terminal:3-hydroxyacyl-CoA dehydrogenase, NAD-binding	Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase, C-terminal:3-hydroxyacyl-CoA dehydrogenase, NAD-binding	4-enzyme protein; Code: I; COG: COG1250 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8446033; Product type e : enzyme multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)	Fatty oxidation complex, alpha subunit FadB	
ECOLI03715	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	Residues 1 to 443 of 443 are 99 pct identical to residues 1 to 443 of a 443 aa protein from Escherichia coli K12 ref: NP_418289.1 proline dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark proline dipeptidase	IPR001131: Xaa-Pro dipeptidase/Xaa-Pro aminopeptidase proline dipeptidase	similar to Salmonella typhi CT18 proline dipeptidase proline dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	proline dipeptidase	identified by similarity to SP:P21165; match to protein family HMM PF00557 Xaa-Pro dipeptidase	Code: E; COG: COG0006 proline dipeptidase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 6336737, 372108; Product type e : enzyme Xaa-Pro proline dipeptidase	Code: E; COG: COG0006 proline dipeptidase	proline dipeptidase	Xaa-Pro aminopeptidase COG0006	Code: E; COG: COG0006 proline dipeptidase	proline dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	Xaa-Pro dipeptidase	Proline dipeptidase	proline dipeptidase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	
ECOLI03716	IMPACT family member yigZ	Putative uncharacterized protein	Putative uncharacterized protein	IMPACT family member HI0722	DNA polymerase III-like, beta chain	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Proline dipeptidase, putative	Putative uncharacterized protein	Putative uncharacterized protein STY3575	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Xaa-Pro dipeptidase	Putative uncharacterized protein	Putative uncharacterized protein	Conserved hypothetical protein	Proline dipeptidase	Hypothetical protein yigZ	identified by match to protein family HMM PF01205; match to protein family HMM TIGR00257 conserved hypothetical protein TIGR00257	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03717	Trk system potassium uptake protein trkH	TRK potassium uptake system protein	Trk system potassium uptake protein trkH	Bis(5`-nucleosyl)-tetraphosphatase, symmetrical/Trk system potassium uptake protein TrkG, fusion	TrkH	Trk-type K+ transport system, membrane component	Trk system potassium uptake protein	Probable Trk system potassium uptake protein	Putative potassium uptake protein TrkH	Trk system potassium uptake protein trkH	Potassium uptake protein TrkH	Trk system potassium uptake protein	Trk system potassium uptake protein	Potassium uptake protein TrkH	Trk system potassium uptake protein	PMID: 7896723 best DB hits: BLAST: gb:AAB90400.1; (AE001046) TRK potassium uptake system protein; E=8e-61 pir:G82037; potassium uptake protein TrkH VC2756 [imported] - Vibrio; E=4e-49 swissprot:P44843; TRKH_HAEIN TRK SYSTEM POTASSIUM UPTAKE PROTEIN; E=1e-46 COG: AF0839; COG0168 Trk-type K+ transport systems, membrane components; E=8e-62 NMB0661_2; COG0168 Trk-type K+ transport systems, membrane; E=1e-36 PA3210; COG0168 Trk-type K+ transport systems, membrane components; E=1e-36 PFAM: PF02386; Sodium transport protein; E=1.1e-54 TRK potassium uptake system protein (trkH)	Trk system potassium uptake protein	Putative potassium uptake protein TrkH	Potassium uptake protein TrkH	Trk system potassium uptake protein trkH	Trk system potassium uptake protein TrkH	Potassium uptake protein TrkH	Residues 1 to 483 of 483 are 100 pct identical to residues 1 to 483 of a 483 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290479.1 potassium uptake protein, requires TrkE	Trk system potassium uptake protein TrkH	Cation transport protein	TrkH protein	Trk system potassium uptake protein	similar to Salmonella typhi CT18 trk system potassium uptake protein trk system potassium uptake protein	Trk system potassium uptake protein TrkH	
ECOLI03718	Protoporphyrinogen oxidase	Putative uncharacterized protein	Protoporphyrinogen oxidase	Protoporphyrinogen oxidase	putative protoporphyrinogen oxidase	Protoporphyrinogen oxidase	Protoporphyrinogen oxidase	Protoporphyrinogen oxidase	Putative uncharacterized protein	Protoporphyrinogen oxidase	Protoporphyrinogen oxidase	Protoporphyrinogen oxidase	protoporphyrinogen oxidase	Protoporphyrinogen oxidase	Residues 1 to 181 of 181 are 98 pct identical to residues 1 to 181 of a 181 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290480.1 protoporphyrinogen oxidase	Protoporphyrinogen oxidase	HemG protein	Protoporphyrinogen oxidase	IPR001226: Flavodoxin; IPR008254: Flavodoxin/nitric oxide synthase protoporphyrin oxidase	similar to Salmonella typhi CT18 protoporphyrinogen oxidase protoporphyrinogen oxidase	Protoporphyrinogen oxidase	protoporphyrinogen oxidase	LmjF06.1280, predicted protein, len = 232 aa, probably protoporphyrinogen oxidase; predicted pI = 9.7872; good similarity many bacterial protoporphyrinogen oxidase proteins; protoporphyrinogen oxidase-like protein	Flavodoxins FldA protein	Protoporphyrinogen oxidase	Code: CH; COG: COG4635 protoporphyrin oxidase	Code: CH; COG: COG4635 protoporphyrin oxidase	protoporphyrinogen oxidase	protoporphyrinogen oxidase	




ECOLI03719	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	MobB	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	Lmo1043 protein	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	similar to SP:P32125; identified by sequence similarity; putative molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis	Lin1035 protein	Residues 1 to 175 of 175 are 98 pct identical to residues 1 to 175 of a 175 aa protein MOBB_ECOLI sp: P32125 Molybdopterin-guanine dinucleotide biosynthesis protein B	Probable molybdopterin-guanine dinucleotide biosynthesis protein B	Probable molybdopterin-guanine dinucleotide biosynthesis protein b	Molybdopterin-guanine dinucleotide biosynthesis protein B	identified by similarity to SP:P32125; match to protein family HMM PF03205; match to protein family HMM TIGR00176 molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	Molybdopterin-guanine dinucleotide biosynthesis protein B	
ECOLI03720	Molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Molybdopterin-guanine dinucleotide biosynthesis protein A, putative	Putative molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Putative molybdopterin-guanine dinucleotide biosynthesis protein A	putative molybdopterin-guanine dinucleotide biosynthesis protein A	Molybdopterin-guanine dinucleotide biosynthesis protein A	molybdopterin-guanine dinucleotide biosynthesis protein A, putative	similar to SP:P32173; identified by sequence similarity; putative molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Molybdopterin-guanine dinucleotide biosynthesis protein A	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Molybdopterin-guanine dinucleotide biosynthesis protein A	Molybdopterin-guanine dinucleotide biosynthesis protein A	Product confidence : probable Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN	Probable molybdopterin-guanine dinucleotide biosynthesis protein A	Molybdopterin-guanine dinucleotide biosynthesis protein A	
ECOLI03721	Protein yihD	Putative uncharacterized protein	Putative uncharacterized protein VV3233	Putative uncharacterized protein STY3885	Conserved hypothetical protein	Protein yihD	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP3051	Protein yihD	Putative uncharacterized protein	Residues 11 to 99 of 99 are 98 pct identical to residues 1 to 89 of a 89 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290483.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	glycogen debranching enzyme	Similar to: HI0845, YIHD_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	Code: S; COG: COG3084 conserved hypothetical protein	Code: S; COG: COG3084 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3084; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yihD	Hypothetical protein	
ECOLI03722	Protein rdoA	Putative homoserine kinase type II	Putative uncharacterized protein	Protein rdoA	Putative uncharacterized protein	Putative uncharacterized protein	Conserved hypothetical protein	Utative homoserine kinase type II	Protein rdoA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP3053	Protein rdoA	Putative homoserine kinase type II	Homoserine kinase type II	Residues 1 to 328 of 328 are 98 pct identical to residues 1 to 328 of a 328 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290484.1 orf, conserved hypothetical protein	Putative homoserine kinase type II	Putative uncharacterized protein	Similar to unknown protein YihE of Escherichia coli	Putative uncharacterized protein	putative homoserine kinase type II, protein kinase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	serine protease	Putative uncharacterized protein	Homoserine kinase type II homolog	
ECOLI03723	Thiol:disulfide interchange protein dsbA	Disulfide oxidoreductase	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein DsbA	DsbA	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein dsbA precursor	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein DsbA	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein DsbA	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein dsbA	Residues 1 to 208 of 208 are 99 pct identical to residues 1 to 208 of a 208 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290485.1 protein disulfide isomerase I, essential for cytochrome c synthesis and formate-dependent reduction	Thiol:disulfide interchange protein dsbA	DsbA protein	Probable thiol:disulfide interchange signal peptide protein	Disulfide interchange protein DsbA	thiol:disulfide interchange protein precursor DsbA	Thiol:disulfide interchange protein dsbA	Thiol:disulfide interchange protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark disulfide oxidoreductase	IPR006662: Thioredoxin type domain; IPR006663: Thioredoxin domain 2 periplasmic protein disulfide isomerase I	
ECOLI03724	Uncharacterized protein yihF	Hypothetical protein yihF	Putative GTP-binding protein	Residues 1 to 476 of 476 are 99 pct identical to residues 15 to 490 of a 490 aa protein from Escherichia coli K12 ref: NP_418298.1 putative GTP-binding protein	Putative uncharacterized protein	Putative uncharacterized protein yihF	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yihF	Putative uncharacterized protein yihF	Putative uncharacterized protein yihF	Putative uncharacterized protein yihF	Putative uncharacterized protein yihF	Predicted protein	Putative uncharacterized protein yihF	YihF protein	Conserved protein	Conserved protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI03725	Probable acyltransferase yihG	Putative acyltransferase	Hypothetical protein yihG	Putative uncharacterized protein	Acyltransferase family protein	Acyltransferase family protein	Putative uncharacterized protein VP3055	Putative endonuclease	1-acyl-sn-glycerol-3-phosphate acyltransferase	Residues 9 to 318 of 318 are 99 pct identical to residues 1 to 310 of a 310 aa protein from Escherichia coli K12 ref: NP_418299.1 putative endonuclease	Similar to acetyltransferase hypothetical protein	similar to Salmonella typhi CT18 putative acyltransferase putative acyltransferase	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative phospholipid/glycerol acyltransferase	1-acyl-sn-glycerol-3-phosphate acyltransferase	Acyltransferase, putative	Similar to Q8DDF5 1-acyl-sn-glycerol-3-phosphate acyltransferase from Vibrio vulnificus (271 aa). FASTA: opt: 749 Z-score: 902.5 E(): 2e-42 Smith-Waterman score: 749; 40.370 identity in 270 aa overlap ORF ftt0180 Acetyltransferase	Phosphate acyltransferase family protein	Putative endonuclease	identified by match to protein family HMM PF01553 acyltransferase family protein	Phospholipid/glycerol acyltransferase	Code: I; COG: COG0204 putative endonuclease	Code: I; COG: COG0204 putative endonuclease	phospholipid/glycerol acyltransferase	phospholipid/glycerol acyltransferase	Phospholipid/glycerol acyltransferase	Code: I; COG: COG0204 putative endonuclease	Putative uncharacterized protein	Phospholipid/glycerol acyltransferase precursor	Phospholipid/glycerol acyltransferase	

ECOLI03726	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	identified by match to PFAM protein family HMM PF03105 DNA polymerase I	DNA polymerase I	DNA polymerase I	Putative DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	PolA	DNA polymerase I	DNA polymerase I	DNA-directed DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	DNA polymerase I	
ECOLI03727	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	Probable GTP-binding protein engB	

ECOLI03728	UPF0241 protein yihI	UPF0241 protein PM1835	UPF0241 protein VV0191	UPF0241 protein yihI	conserved hypothetical protein	UPF0241 protein yihI	UPF0241 protein VC_0114	UPF0241 protein SO_4728	UPF0241 protein ECA0024	UPF0241 protein VP0113	UPF0241 protein yihI	UPF0241 protein VV1_0896	Residues 1 to 169 of 169 are 100 pct identical to residues 1 to 169 of a 169 aa protein from Escherichia coli K12 ref: NP_418302.1 orf, conserved hypothetical protein	UPF0241 protein YPO0020/y3808/YP_0021	UPF0241 protein plu0229	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0241 protein YPTB0020	putative coproporphyrinogen III oxidase	Similar to: HI0724, Y724_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved protein	UPF0241 protein yihI	identified by similarity to OMNI:SO4728 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3078 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3078 conserved hypothetical protein	conserved hypothetical protein	
ECOLI03729	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen-III oxidase	Oxygen-independent coproporphyrinogen III oxidase	similar to GB:L20688, GB:L07916, GB:X69549, SP:P52566, PID:404045,  and PID:441455; identified by sequence similarity; putative oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen-III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	HemN	Oxygen-independent coproporphyrinogen-III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen-III oxidase	Oxygen independent coprophorphyrinogen III oxidase	Putative oxygen-independent coproporphyrinogen III oxidase	putative oxygen-independent coproporphyrinogen III oxidase	Oxygene-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	PMID: 10484179 PMID: 7768836 best DB hits: BLAST: ddbj:BAB05062.1; (AP001511) coproporphyrinogen III oxidase; E=1e-32 swissprot:O67886; HEMN_AQUAE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN; E=2e-31 ddbj:BAB10571.1; (AB008265) oxygen-independent; E=6e-30 COG: BH1343; COG0635 Coproporphyrinogen III oxidase and related FeS; E=1e-33 PFAM: PF02473; Oxygen-independent Coproporphy; E=9.5e-08 coproporphyrinogen III oxidase	glimmer prediction Global similarity to hemN-encoded oxygen-independent coproporphyrinogen III oxidase from several bacteria including Pseudomonas, B.  japonicum, and Rhodobacter; in E.coli HemN catalyzes the conversion of coproporphyrinogen III + NAD(P) --> protoporphyrinogen + NAD(P)H HemN  coproporphyrinogen III oxidase	Oxygen-independent coproporphyrinogen III oxidase	

ECOLI03730	Nitrogen regulation protein NR(I)	Two-component system, regulatory protein	Two-component system regulatory protein	Nitrogen regulation protein NR(I)	Two-component response regulator NtrC	Nitrogen regulation protein	Two component response regulator	Two-component system, response regulator	Sensory box sigma-54 dependent DNA-binding response regulator	Sigma-54-dependent transcriptional activator	Nitrogen regulation protein NR(I)	putative nitrogen regulation protein	Nitrogen regulation protein NR(I)	identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199 sensory box sigma-54 dependent DNA-binding response regulator	similar to GP:2598277, GB:M81757, SP:P39019, and PID:337733; identified by sequence similarity; putative nitrogen regulation protein NtrC	Nitrogen regulation protein NR(I)	Nitrogen regulation protein NR(I)	Nitrogen regulation two-component system, response regulator	Nitrogen regulation protein NR(I)	Nitrogen regulation protein NR(I)	NITROGEN ASSIMILATION REGULATORY PROTEIN	Nitrogen regulation protein	Nitrogen regulation protein NR(I)	nitrogen assimilation regulatory protein ntrC	Nitrogen assimilation regulatory protein ntrC Response regulator	Response regulator for NtrB	Residues 21 to 489 of 489 are 99 pct identical to residues 1 to 469 of a 469 aa protein from Escherichia coli O157:H7 ref: NP_312817.1 response regulator for gln GlnG	Nitrogen regulation protein	Probable nitrogen assimilation regulatory response regulator transcription regulator protein	
ECOLI03731	Nitrogen regulation protein NR(II)	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Nitrogen regulation protein NR(II)	Two-component sensor histidine kinase	Sensor protein	Sensor protein	Sensor protein	putative nitrogen regulation protein	Sensor protein	Sensor protein	PhoR protein-like	similar to GB:M83822, SP:P50851, and PID:1580781; identified by sequence similarity; putative nitrogen regulation protein NtrB	Sensor protein	Sensor protein	Sensor protein	Sensor protein	predicted by Codon_usage predicted by Homology predicted by FrameD NITROGEN REGULATION PROTEIN	Sensor protein	two-component sensor histidine kinase	Sensor protein	Sensor protein	Sensor protein	Sensor protein	
ECOLI03732	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase I	Glutamine synthetase	hypothetical glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase	Glutamine synthetase I	Glutamine synthetase	putative glutamate-ammonia ligase	Glutamine synthetase	Glutamine synthetase	identified by match to PFAM protein family HMM PF00120 glutamine synthetase, type I	Glutamine synthetase	Glutamine synthetase	
ECOLI03733	GTP-binding protein typA/BipA	GTP-binding protein TypA/BipA	GTP-binding protein TypA	GTP-binding elongation factor protein	GTP-binding translation elongation factor tu family protein, putative	GTP-binding protein TypA/BipA homolog	GTP-binding elongation factor protein	GTP-binding protein typA/bipA homolog	GTP-binding elongation factor family protein TypA/BipA	GTP-binding elongation factor family protein, typA subfamily	Putative GTP-binding elongation factor	Widely conserved protein similar to those annotated as GTP-binding elongation factor TypA/BipA	Tyrosine binding protein	Tyrosine binding protein	Probable GTP-binding protein	GTP-binding protein TypA	Elongation factor Tu family protein	GTP-binding protein	GTP-binding protein TypA	Putative uncharacterized protein	Regulatory protein TypA	GTP-binding protein TypA homolog	GTP-binding protein TypA	GTP-binding elongation factor family protein TypA/BipA	GTP-binding protein TYPA/BIPA-like protein	GTP-binding tyrosin phosphorylated protein	GTP-binding protein	GTP-binding protein TypA	GTP-binding protein TypA	
ECOLI03734	Uncharacterized HTH-type transcriptional regulator yihL	Hypothetical transcriptional regulator yihL	Uncharacterized HTH-type transcriptional regulator yihL	Residues 1 to 236 of 236 are 100 pct identical to residues 1 to 236 of a 236 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290497.1 putative transcriptional regulator	Hypothetical transcriptional regulator YihL	probable transcriptional regulator	putative transcriptional regulator Code: K; COG: COG2188	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Probable transcriptional regulator	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcription regulator, GntR family	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	YihL protein	Predicted DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	predicted DNA-binding transcriptional regulator	Predicted DNA-binding transcriptional regulator	
ECOLI03735	Uncharacterized protein yihM	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Conserved protein	Putative uncharacterized protein yihM	SCF55.01c, hypothetical protein, len: >231 aa; similar to SW:YIHM_ECOLI (EMBL:L19201) Escherichia coli hypothetical 36.9 KD protein in GlnA-Rbn intergenic region, 326 aa; fasta scores: opt: 188 z-score: 232.7 E(): 1.4e-05; 22.1% identity in 217 aa overlap SC5G5.09c, conserved hypothetical protein (fragment), len: >92 aa; similar to C-terminal region of TR:BAB38218 (EMBL:AP002567) Escherichia coli O157:H7 hypothetical 37.1 kDa protein ECS4795, 326 aa; fasta scores: opt: 106 Z-score: 142.9 bits: 33.0 E(): 2.4; 25.882% identity in 85 aa overlap conserved hypothetical protein	Residues 1 to 326 of 326 are 99 pct identical to residues 1 to 326 of a 326 aa protein from Escherichia coli K12 ref: NP_418309.1 orf, conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein	AP endonuclease, family 2	Xylose isomerase domain protein TIM barrel	Predicted sugar phosphate isomerase	AP endonuclease, family 2	Xylose isomerase domain protein TIM barrel	AP endonuclease, family 2	AP endonuclease, family 2	Putative uncharacterized protein	pseudo	Putative sugar phosphate isomerase	Putative sugar phosphate isomerase	Putative sugar phosphate isomerase	YihM protein	Predicted sugar phosphate isomerase	Predicted sugar phosphate isomerase	predicted sugar phosphate isomerase	Predicted sugar phosphate isomerase	
ECOLI03736	Inner membrane protein yihN	Hypothetical protein yihN	Transporter, MFS superfamily	Putative resistance protein	Residues 1 to 311 of 319 are 99 pct identical to residues 34 to 344 of a 421 aa protein from Escherichia coli K12 ref: NP_418310.1 putative resistance protein (transport)	Putative membrane protein	similar to |18309404|ref|NP_561338.1| conserved hypothetical protein [Clostridium perfringens str. 13] hypothetical protein	transporter, MFS superfamily	Putative membrane protein YihN	Putative membrane protein	Major facilitator superfamily MFS_1	Membrane protein	putative resistance protein (transport) Code: GEPR; COG: COG0477	Membrane protein	permease of the major facilitator superfamily	Transporter, major facilitator family	Major facilitator superfamily MFS_1 precursor	Predicted transporter	Transporter, major facilitator family	Major facilitator superfamily MFS_1 precursor	Transporter, major facilitator family	Permease of the major facilitator superfamily	Putative uncharacterized protein	MFS-family transporter	Transporter, MFS superfamily	Transporter, major facilitator family	MFS transporter	Putative uncharacterized protein	Putative transporter	
ECOLI03737	Porin ompL	Porin ompL	putative outer membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Porin ompL	Putative uncharacterized protein	Oligogalacturonate-specific porin protein KdgM	Predicted outer membrane porin L	Outer membrane porin	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Porin OmpL	Porin OmpL	Porin OmpL	Putative uncharacterized protein yshA	Porin OmpL	Oligogalacturonate-specific porin protein KdgM	Porin OmpL	Putative uncharacterized protein yshA	Putative uncharacterized protein	Putative outer membrane porin L	Putative outer membrane porin L	Putative outer membrane porin L	Putative outer membrane porin L	Putative uncharacterized protein yshA	OmpL protein	Predicted outer membrane porin L	
ECOLI03738	Uncharacterized symporter yihO	Uncharacterized symporter sll1374	Putative membrane permease	Putative permease	Residues 1 to 469 of 469 are 98 pct identical to residues 1 to 469 of a 469 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290501.1 putative permease	IPR001927: Sodium:galactoside symporter putative GPH family transport protein	similar to Salmonella typhi CT18 putative membrane permease putative membrane permease	Uncharacterized symporter yihO	GPH family from Saier's classification sugar/cation symporter, GPH family	sugar transporter COG2211 Na+/melibiose symporter and related transporters	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1 KEGG: rsp:RSP_1089 sugar/cation symporter, GPH family	putative permease Code: G; COG: COG2211	Na+/melibiose symporter and related transporters- like protein precursor	Na+/melibiose symporter and related transporter- like protein	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Putative uncharacterized protein	Sugar (Glycoside-Pentoside-Hexuronide) transporter family protein	Sugar (Glycoside-Pentoside-Hexuronide) symporter	Predited transporter	Sugar (Glycoside-Pentoside-Hexuronide) transporter family protein	Putative uncharacterized protein	Putative uncharacterized protein	Major facilitator superfamily MFS_1	Putative uncharacterized protein	Putative membrane permease	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Putative permease	Sugar (Glycoside-Pentoside-Hexuronide) transporter	pseudo	
ECOLI03739	Inner membrane symporter yihP	Putative permease	Residues 5 to 357 of 417 are 98 pct identical to residues 1 to 353 of a 481 aa protein from Escherichia coli pir: S40821 orf, conserved hypothetical protein	IPR001927: Sodium:galactoside symporter putative GPH family transport protein	similar to Salmonella typhi CT18 putative membrane permease putative membrane permease	Inner membrane symporter yihP	Major facilitator superfamily MFS_1	putative permease Code: G; COG: COG2211	Putative Sodium:galactoside symporter family protein	Putative uncharacterized protein	Sugar transporter family protein	Predicted transporter	Sugar transporter family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane permease	Inner membrane symporter YihP	Inner membrane symporter YihP	Inner membrane symporter YihP	Putative membrane permease	Inner membrane symporter YihP	Sugar transporter family protein	Inner membrane symporter YihP	Putative membrane permease	Putative transport protein	Putative transporter	Sugar (Glycoside-Pentoside-Hexuronide) transporter	Putative transporter	
ECOLI03740	Alpha-glucosidase yihQ	Glycosidase	Putative glycosyl hydrolase	Putative glycosidase	Alpha-glucosidase	Residues 1 to 678 of 678 are 99 pct identical to residues 1 to 678 of a 678 aa protein from Escherichia coli K12 ref: NP_418314.1 putative glycosidase	putative alpha-xylosidase	similar to Salmonella typhi CT18 putative glycosyl hydrolase putative glycosyl hydrolase	Similar to Q8ZKT9 Putative alpha-xylosidase from Salmonella typhimurium (678 aa). FASTA: opt: 2551 Z-score: 3058.2 E(): 1.9e-162 Smith-Waterman score: 2551; 54.364 identity in 653 aa overlap. Contains an in-frame stop codon pseudo glycosyl hydrolases family 31 protein,pseudogene	Putative alpha-xylosidase	Glycoside hydrolase, family 31	glycoside hydrolase, family 31 PFAM: glycoside hydrolase, family 31 KEGG: lil:LA2944 Alpha-glucosidase II	pseudo glycosyl hydrolases family 31 protein,pseudogene Similar to Q8ZKT9 Putative alpha-xylosidase from Salmonella typhimurium (678 aa). FASTA: opt: 2551 Z-score: 3058.2 E(): 1.9e-162 Smith-Waterman score: 2551; 54.364 identity in 653 aa overlap. Contains an in-frame stop codon	Glycoside hydrolase, family 31 precursor	predicted protein	putative glycosidase Code: G; COG: COG1501	glycosyl hydrolases family 31 protein	glycoside hydrolase, family 31	Putative uncharacterized protein	Glycosyl hydrolase, family 31	jgi|Lotgi1|196733|estExt_Genewise1.C_sca_790051	Alpha-glucosidase	Glycosyl hydrolase, family 31	Putative uncharacterized protein	Glycoside hydrolase family 31	Alpha-glucosidase	Putative uncharacterized protein	Alpha-glucosidase II	
ECOLI03741	Uncharacterized protein yihR	TVG1000457 protein	hypothetical protein	Aldose epimerase family protein	Putative aldose epimerase	Putative uncharacterized protein STY3858	Putative aldose-1-epimerase	Putative aldose 1-epimerase	Putative aldose-1-epimerase	Residues 1 to 308 of 308 are 98 pct identical to residues 1 to 308 of a 308 aa protein from Escherichia coli K12 ref: NP_418315.1 putative aldose-1-epimerase	Aldose epimerase	IPR008183: Aldose 1-epimerase putative aldose-1-epimerase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	conserved Archaeal protein	Putative aldose-1-epimerase	putative aldose-1-epimerase	putative aldose-1-epimerase	probable aldose-1-epimerase	Aldose 1-epimerase PFAM: Aldose 1-epimerase KEGG: mpa:MAP3850c hypothetical protein	hypothetical protein COG family: galactose mutarotase and relatedenzymes Orthologue of BL1359 PFAM_ID: Aldose_epim	Aldose 1-epimerase PFAM: Aldose 1-epimerase KEGG: pac:PPA1015 putative aldose-1-epimerase	Aldose 1-epimerase PFAM: Aldose 1-epimerase KEGG: blo:BL1360 hypothetical protein in aldose epimerase family	putative aldose-1-epimerase Code: G; COG: COG2017	Predicted aldose-1-epimerase	Putative uncharacterized protein	Aldose-1-epimerase family protein	Aldose 1-epimerase	YoxA	Aldose 1-epimerase	
ECOLI03742	Uncharacterized sugar isomerase yihS	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	glimmer prediction conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yihS	Residues 1 to 418 of 418 are 99 pct identical to residues 1 to 418 of a 418 aa protein from Escherichia coli K12 ref: NP_418316.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	similar to Salmonella typhimurium putative isomerase putative isomerase	Putative uncharacterized protein	Putative isomerase	Putative isomerase	identified by similarity to OMNI:NTL01XA1535; match to protein family HMM PF07221 conserved hypothetical protein	identified by match to protein family HMM PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) superfamily	identified by match to protein family HMM PF07221 conserved hypothetical protein	N-acylglucosamine 2-epimerase	conserved hypothetical protein	conserved hypothetical protein	N-acylglucosamine 2-epimerase	N-acylglucosamine 2-epimerase	N-acyl-D-glucosamine 2-epimerase COG2942	putative mannose-6-phosphate isomerase similarity:fasta; with=UniProt:MANA_RHIME (EMBL:SME591792); Rhizobium meliloti (Sinorhizobium meliloti).; pmi; Mannose-6-phosphate isomerase (EC 5.3.1.8) (Phosphomannose isomerase) (PMI) (Phosphohexomutase).; length=387; id 27.525; 396 aa overlap; query 21-398; subject 14-384 similarity:fasta; with=UniProt:Q8UDG9_AGRT5 (EMBL:AE009166); Agrobacterium tumefaciens (strain C58/ATCC 33970).; Hypothetical protein Atu2156.; length=415; id 72.973; 407 aa overlap; query 12-417; subject 10-413	N-acylglucosamine 2-epimerase	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) family identified by match to protein family HMM PF07221	hypothetical conserved protein similar to AGR_C_3910p [Agrobacterium tumefaciens].  Related to mannose-6-phosphate isomerase PP4860[Pseudomonas putida KT2440] Similar to swissprot:Q8UDG9 Putative location:bacterial inner membrane Psort-Score: 0.1298	N-acylglucosamine 2-epimerase	Mannose-6-phosphate isomerase	
ECOLI03743	Uncharacterized aldolase yihT	Uncharacterized aldolase yihT	Tagatose 1,6-diphosphate aldolase	Hypothetical protein yihT	Putative aldolase	Tagatose 1,6-diphosphate aldolase 1	Uncharacterized aldolase yihT	tagatose-1,6-bisphosphate aldolase	Tagatose 1,6-diphosphate aldolase	Tagatose 1,6-diphosphate aldolase	Residues 1 to 292 of 292 are 99 pct identical to residues 1 to 292 of a 292 aa protein from Escherichia coli K12 ref: NP_418317.1 putative aldolase	Tagatose 1,6-diphosphate aldolase	identified by similarity to EGAD:9829; match to protein family HMM PF04274; match to protein family HMM TIGR01232 tagatose 1,6-diphosphate aldolase	Tagatose-bisphosphate aldolase	Tagatose 1,6-diphosphate aldolase	Tagatose-1,6-bisphosphate aldolase	putative aldolase	similar to Salmonella typhi CT18 putative aldolase putative aldolase	Tagatose 1,6-diphosphate aldolase 2	tagatose 1,6-diphosphate aldolase	Ortholog of S. aureus MRSA252 (BX571856) SAR2283 tagatose 1,6-diphosphate aldolase	tagatose 1,6-diphosphate aldolase	Tagatose 1,6-diphosphate aldolase 1	best blastp match gb|AAK34454.1| (AE006600) putative tagatose 1,6-diphosphate aldolase [Streptococcus pyogenes M1 GAS] putative tagatose 1,6-diphosphate aldolase	identified by match to protein family HMM PF04274 tagatose 1,6-diphosphate aldolase, putative	Tagatose 1,6-diphosphate aldolase	Uncharacterized aldolase yihT	tagatose 1,6-diphosphate aldolase	identified by similarity to SP:P11100; match to protein family HMM PF04274 tagatose 1,6-diphosphate aldolase, putative	
ECOLI03744	Uncharacterized oxidoreductase yihU	Putative oxidoreductase	Hypothetical oxidoreductase yihU	pseudo	Probable oxidoreductase	pseudo	Putative dehydrogenase	Residues 1 to 298 of 298 are 100 pct identical to residues 1 to 298 of a 298 aa protein from Escherichia coli K12 ref: NP_418318.1 putative dehydrogenase	IPR000205: NAD-binding site; IPR002204: 3-hydroxyisobutyrate dehydrogenase putative oxidoreductase	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	Uncharacterized oxidoreductase yihU	Code: I; COG: COG2084 putative dehydrogenase	Code: I; COG: COG2084 putative dehydrogenase	Hypothetical oxidoreductase YihU	Hypothetical oxidoreductase YihU	putative dehydrogenase Code: I; COG: COG2084	conserved hypothetical protein similar to oxidoreductase YihU	6-phosphogluconate dehydrogenase, NAD-binding	Lodderomyces elongisporus (LELG_04908.1) conserved hypothetical protein (translation)	Putative uncharacterized protein	3-hydroxyisobutyrate dehydrogenase family	Predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain	3-hydroxyisobutyrate dehydrogenase family	3-hydroxyisobutyrate dehydrogenase	3-hydroxyisobutyrate dehydrogenase family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	6-phosphogluconate dehydrogenase NAD-binding	
ECOLI03745	Uncharacterized sugar kinase yihV	Ribokinase	Vng2516c	296aa long hypothetical ribokinase	Sugar kinase	Fructokinase	Sugar kinase	Putative sugar kinase	Hypothetical sugar kinase yihV	fructokinase	Putative kinase	probable sugar kinase	Residues 1 to 300 of 300 are 99 pct identical to residues 1 to 300 of a 300 aa protein from Escherichia coli K12 ref: NP_418319.1 putative kinase	Putative uncharacterized protein	Carbohydrate kinase protein	IPR002139: Ribokinase; IPR002173: Carbohydrate kinase, PfkB putative sugar kinase	similar to Salmonella typhi CT18 putative sugar kinase putative sugar kinase	Putative sugar kinase	Sugar kinase, ribokinase family	Fructokinase	Code: G; COG: COG0524 putative kinase	Ketohexokinase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative carbohydrate kinase	Citation: Welch, R. A. et al. (2002) PNAS, 99:17020-17024. Carbohydrate kinase, PfkB	Code: G; COG: COG0524 putative kinase	PfkB	putative ribokinase similarity:fasta; SWALL:RBSK_ECOLI (SWALL:P05054); Escherichia coli, and Escherichia coli O157:H7; ribokinase; rbsK; length 309 aa; id=27.56; ungapped id=30.17; E()=6.1e-11; 312 aa overlap; query 17-313 aa; subject 7-306 aa similarity:fasta; SWALL:Q7CWW4 (EMBL:AE008163); Agrobacterium tumefaciens; agr_c_4560p; length 319 aa; id=61.51; ungapped id=61.71; E()=1.1e-64; 304 aa overlap; query 11-314 aa; subject 5-307 aa	PfkB PFAM: PfkB: (1.4e-47) KEGG: dra:DR0728 fructokinase, ev=1e-134, 78% identity	probable carbohydrate kinase protein, PfkB family Similar to AGR_C_4560p [Agrobacterium tumefaciens] and mlr3534 [Mesorhizobium loti] Similar to swissprot:Q8UCH8 Putative location:bacterial cytoplasm Psort-Score: 0.0778; go_function: kinase activity [goid 0016301]	
ECOLI03746	Uncharacterized HTH-type transcriptional regulator yihW	Hypothetical transcriptional regulator yihW	Putative lactose phosphotransferase system repressor protein	Putative DEOR-type transcriptional activator	Residues 1 to 269 of 269 are 99 pct identical to residues 1 to 269 of a 269 aa protein from Escherichia coli O157:H7 ref: NP_312834.1 putative DEOR-type transcriptional regulator	Lactose phosphotransferase system repressor	identified by similarity to SP:P09392; match to protein family HMM PF00455 glycerol-3-phosphate regulon repressor	IPR001034: Bacterial regulatory protein, DeoR family putative glycerol-3-phosphate regulon repressor (DeoR family)	similar to Salmonella typhi CT18 putative DeoR-family transcriptional regulator putative DeoR-family transcriptional regulator	Putative lactose phosphotransferase system repressor protein	best blastp match gb|AAK34627.1| (AE006617) putative lactose phosphotransferase system repressor protein [Streptococcus pyogenes M1 GAS] putative lactose phosphotransferase system repressor protein	Putative glycerol-3-phosphate regulon repressor	lactose phosphotransferase system repressor	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	Lactose phosphotransferase system repressor	Lactose phosphotransferase system repressor	transcriptional regulator, DeoR family PFAM: regulatory protein, DeoR: (2.7e-32) Helix-turn-helix, type 11: (1.5e-08) KEGG: pae:PA3583 glycerol-3-phosphate regulon repressor, ev=2e-39, 39% identity	lactose phosphotransferase system repressor	glycerol-3-phosphate transcriptional regulator protein, DeoR family Similar to glpR (XCC0361) [Xanthomonas campestris pv. campestris str. ATCC 33913] and glpR (SMc02521)[Sinorhizobium meliloti] Similar to swissprot:Q8PDH7 Putative location:bacterial cytoplasm Psort-Score: 0.2402; go_component: intracellular [goid 0005622]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	Hypothetical transcriptional regulator YihW	Hypothetical transcriptional regulator YihW	Lactose phosphotransferase system repressor	putative DEOR-type transcriptional regulator Code: KG; COG: COG1349	transcriptional regulator for glycerol-3-phosphate regulon, DeoR family protein PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein KEGG: rme:Rmet_2235 transcriptional regulator, DeoR family	Lactose phosphotransferase system repressor 2	putative bacterial regulatory protein similar to DNA-binding transcriptional regulator YihW	Putative uncharacterized protein	Transcriptional regulator, DeoR/GntR family	
ECOLI03747	Phosphatase yihX	Putative hydrolase	Putative uncharacterized protein	Putative haloacid dehalogenase-like hydrolase	Putative haloacid dehalogenase-like hydrolase	Putative hydrolase protein	Putative haloacid dehalogenase-like hydrolase	Hypothetical protein yihX	Putative uncharacterized protein	Haloacid dehalogenase-like hydrolase	Putative hydrolase	Hydrolase, haloacid dehalogenase-like family	HAD-superfamily hydrolase	Putative phosphatase	unknown protein	Haloacid dehalogenase-like hydrolase	HAD superfamily hydrolase	Hydrolase	Residues 1 to 206 of 206 are 99 pct identical to residues 1 to 206 of a 206 aa protein from Escherichia coli K12 ref: NP_418321.1 putative phosphatase	Putative uncharacterized protein	Similar to putative YihX of Escherichia coli	unknown protein	Hydrolase, haloacid dehalogenase-like family	Mb3410, -, len: 217 aa. Equivalent to Rv3376, len: 217 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 217 aa overlap). Hypothetical protein, similar to various bacterial proteins (notably hydrolases) e.g. Q9RUP0|DR1344 HYDROLASE from Deinococcus radiodurans (222 aa), FASTA scores: opt: 348, E(): 1.8e-15, (36.75% identity in 215 aa overlap); Q9RXA1|DR0414 HYDROLASE (CBBY/CBBZ/GPH/YIEH FAMILY) from Deinococcus radiodurans (155 aa), FASTA scores: opt: 233, E(): 3.5e-08, (36.4% identity in 151 aa overlap); Q9X0Q9|TM1177 CONSERVED HYPOTHETICAL PROTEIN from Thermotoga maritima (225 aa), FASTA scores: opt: 231, E(): 6.6e-08, (27.6% identity in 221 aa overlap); Q9ABI3|CC0244 HYDROLASE, HALOACID DEHALOGENASE-LIKE from Caulobacter crescentus (213 aa), FASTA scores: opt: 213, E(): 9.1e-07, (28.95% identity in 221 aa overlap); BAB38231|ECS4808 PUTATIVE PHOSPHATASE from Escherichia coli strain O157:H7 (206 aa), FASTA scores: opt: 210, E(): 1.4e-06, (26.95% identity in 193 aa overlap); etc. CONSERVED HYPOTHETICAL PROTEIN	putative HAD superfamily hydrolase	Putative uncharacterized protein ybbC	IPR005833: Haloacid dehalogenase/epoxide hydrolase paral putative enzyme	similar to Salmonella typhi CT18 putative haloacid dehalogenase-like hydrolase putative haloacid dehalogenase-like hydrolase	Putative uncharacterized protein	
ECOLI03748	tRNA-processing ribonuclease BN	Ribonuclease BN, putative	tRNA-processing ribonuclease BN	tRNA-processing ribonuclease BN	tRNA-processing ribonuclease BN	tRNA-processing ribonuclease BN	tRNA-processing ribonuclease BN	Putative ribonuclease BN	tRNA-processing ribonuclease BN	tRNA-processing ribonuclease BN	putative ribonuclease BN	Putative uncharacterized protein	Ribonuclease BN	tRNA-processing ribonuclease BN	Ribonuclease BN family protein	UPF0761 membrane protein VC_2742	tRNA-processing ribonuclease BN	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE RIBONUCLEASE RNASE BN (RBN) TRANSMEMBRANE PROTEIN	PUTATIVE RIBONUCLEASE BN EC 3.1. 	Conserved hypothetical integral membrane protein	UPF0761 membrane protein VP0125	UPF0761 membrane protein yihY	UPF0761 membrane protein CBU_1578	UPF0761 membrane protein VV1_0885	Residues 1 to 290 of 290 are 99 pct identical to residues 1 to 290 of a 290 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290512.1 tRNA processing exoribonuclease BN	tRNA-processing ribonuclease BN	UPF0761 membrane protein CV_0810	identified by similarity to SP:P32146; match to protein family HMM PF03631; match to protein family HMM TIGR00765 ribonuclease BN	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ribonuclease BN	
ECOLI03749	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase;	D-Tyr-tRNA(Tyr) deacylase, functions in protein translation, may affect nonsense suppression via alteration of the protein synthesis machinery; ubiquitous among eukaryotes. [Source:SGD;Acc:S000002378]	similar to tr|O14274 Schizosaccharomyces pombe Conserved hypothetical protein, hypothetical start	D-tyrosyl-tRNA(Tyr) deacylase [Source:GeneDB_Spombe;Acc:SPAC8C9.05]	similar to sp|Q07648 Saccharomyces cerevisiae YDL219w singleton, start by similarity	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	hypothetical protein, conserved	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	DEHA2G00924p;similar to uniprot|Q07648 Saccharomyces cerevisiae YDL219W DTD1 D-Tyr-tRNA(Tyr) deacylase functions in protein translation may affect nonsense suppression via alteration of the protein synthesis machinery;	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	
ECOLI03750	Uncharacterized protein yiiD	Putative acetyltransferase	conserved hypothetical protein	Hypothetical protein yiiD	Putative uncharacterized protein	Putative GNAT-family acetyltransferase	Putative uncharacterized protein VP0127	Uncharacterized protein yiiD	Predicted acetyltransferase	Residues 1 to 329 of 329 are 99 pct identical to residues 1 to 329 of a 329 aa protein from Escherichia coli O157:H7 ref: NP_312838.1 putative acetyltransferase	Conserved membrane protein	Similar to putative acetyltransferase YiiD of Escherichia coli	IPR000182: GCN5-related N-acetyltransferase putative acetyltransferase	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	Conserved membrane protein	acetyltransferase	Acetyltransferase, GNAT family fused to PaaI related uncharacterized conserved domain	Putative acetyltransferase	identified by match to protein family HMM PF00583; match to protein family HMM TIGR02447 acetyltransferase, GNAT family	Code: KR; COG: COG0454 putative acetyltransferase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative acyltransferase	Code: KR; COG: COG0454 putative acetyltransferase	Code: KR; COG: COG0454 putative acetyltransferase	Putative acetyltransferase	Conserved membrane protein	Thioesterase domain, putative	Putative acetyltransferase	Conserved membrane protein	acetyltransferase identified by match to protein family HMM PF00583; match to protein family HMM TIGR02447	
ECOLI03751	Uncharacterized protein yiiE	Uncharacterized protein yiiE	Uncharacterized protein yiiE	Uncharacterized protein yiiE	Predicted transcriptional regulator	Ribbon-helix-helix protein, copG family	Transcriptional regulator, CopG family	Ribbon-helix-helix protein, copG family	Ribbon-helix-helix protein, copG family	Putative uncharacterized protein	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Putative transcriptional regulator	Predicted transcriptional regulator	Putative transcriptional regulator	YiiE protein	Predicted transcriptional regulator	Predicted transcriptional regulator	predicted transcriptional regulator	Predicted transcriptional regulator	
ECOLI03752	Uncharacterized protein yiiF	Putative uncharacterized protein yiiF	Residues 1 to 72 of 72 are 100 pct identical to residues 9 to 80 of a 80 aa protein from Escherichia coli K12 ref: NP_418326.1 orf, conserved hypothetical protein	similar to Salmonella typhi Ty2 putative CopG-family DNA-binding protein putative CopG-family DNA-binding protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein KEGG: bcn:Bcen_4273 hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yiiF	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative CopG-family DNA-binding protein	Ribbon-helix-helix protein, CopG family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yiiF	Putative uncharacterized protein yiiF	Putative uncharacterized protein yiiF	Putative uncharacterized protein yiiF	
ECOLI04255	Putative transposon gamma-delta 80.3 kDa protein	ATPase involved in DNA repair	Putative uncharacterized protein	ATPase involved in DNA repair, putative	hypothetical protein	hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolase domain Evidence 5 : No homology to any previously reported sequences	ATPase involved in DNA repair	Putative uncharacterized protein tnpX	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03753	Protein fdhE	Protein fdhE homolog	Protein fdhE homolog	Protein fdhE	Protein FdhE	Protein fdhE	Protein fdhE homolog	Protein fdhE homolog	Putative formate dehydrogenase formation protein	glimmer prediction probable FdhE formate  formation	Formate dehydrogenase accessory protein	Protein fdhE	hypothetical protein	Residues 1 to 309 of 309 are 99 pct identical to residues 1 to 309 of a 309 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290520.1 affects formate dehydrogenase-N	Protein fdhE homolog	Protein fdhE homolog	Formate dehydrogenase formation protein FdhE	putative formate dehydrogenase formation protein ? Mn_fn	similar to Salmonella typhi CT18 FdhE protein FdhE protein	Putative uncharacterized protein fdhE	Protein fdhE homolog	Similar to: HI0009, FDHE_HAEIN FdhE homolog	Uncharacterized protein involved in formate dehydrogenase formation FdhE protein	Protein fdhE homolog	Protein fdhE	formate dehydrogenase formation protein	Formate dehydrogenase accessory protein	affects formate dehydrogenase-N; Code: O; COG: COG3058 FdhE	affects formate dehydrogenase N; Code: O; COG: COG3058 FdhE	
ECOLI03754	Formate dehydrogenase, cytochrome b556(fdo) subunit	Formate dehydrogenase-O gamma subunit	Formate dehydrogenase, cytochrome b556 (FDO) subunit	Formate dehydrogenase, cytochrome b556(fdo) subunit	Formate dehydrogenase, gamma subunit	Formate dehydrogenase, cytochrome b556(fdo) subunit	Residues 1 to 211 of 211 are 99 pct identical to residues 1 to 211 of a 211 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290521.1 formate dehydrogenase, cytochrome B556 (FDO) subunit	Formate dehydrogenase, cytochrome b556 protein	Formate dehydrogenase, cytochrome B556(FDO) subunit	Formate dehydrogenase	formate dehydrogenase, cytochrome B556 (FDO) subunit	similar to Salmonella typhi CT18 formate dehydrogenase-O gamma subunit formate dehydrogenase-O gamma subunit	Formate dehydrogenase, cytochrome b556 protein	Putative formate dehydrogenase, gamma subunit	Formate dehydrogenase, cytochrome b556 subunit	Formate dehydrogenase, cytochrome B556 (FDO) subunit	Code: C; COG: COG2864 formate dehydrogenase, cytochrome B556 (FDO) subunit	Code: C; COG: COG2864 formate dehydrogenase, cytochrome B556 (FDO) subunit	Formate dehydrogenase, gamma subunit	Code: C; COG: COG2864 formate dehydrogenase, cytochrome B556 (FDO) subunit	Formate dehydrogenase gamma subunit	formate dehydrogenase, gamma subunit identified by match to protein family HMM TIGR01583	Formate dehydrogenase	Formate dehydrogenase, cytochrome b556 protein	Formate dehydrogenase-O, cytochrome B556 (FDO) subunit	formate dehydrogenase, gamma subunit TIGRFAM: formate dehydrogenase, gamma subunit PFAM: cytochrome B561 KEGG: bur:Bcep18194_B2098 formate dehydrogenase, gamma subunit	formate dehydrogenase, gamma subunit TIGRFAM: formate dehydrogenase, gamma subunit KEGG: sme:SMa0007 probable FdoI formate dehydrogenase-O,gamma subunit	Formate dehydrogenase, cytochrome b556 protein	formate dehydrogenase, gamma subunit TIGRFAM: formate dehydrogenase, gamma subunit KEGG: bcn:Bcen_4380 formate dehydrogenase, gamma subunit	
ECOLI03755	Formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O beta subunit	Formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O, iron-sulfur subunit	Residues 1 to 300 of 300 are 100 pct identical to residues 1 to 300 of a 300 aa protein from Escherichia coli K12 ref: NP_418329.1 formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O, iron-sulfur subunit	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain formate dehydrogenase-O, Fe-S subunit	similar to Salmonella typhi CT18 formate dehydrogenase-O beta subunit formate dehydrogenase-O beta subunit	Formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O, Fe-S subunit	Code: C; COG: COG0437 formate dehydrogenase-O, iron-sulfur subunit	Code: C; COG: COG0437 formate dehydrogenase-O, iron-sulfur subunit	Code: C; COG: COG0437 formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase-O, iron-sulfur subunit precursor	4Fe-4S ferredoxin, iron-sulfur binding domain protein	formate dehydrogenase-O, iron-sulfur subunit Code: C; COG: COG0437	Formate dehydrogenase-O, iron-sulfur subunit	formate dehydrogenase-O, Fe-S subunit	Formate dehydrogenase beta subunit	Formate dehydrogenase-O, Fe-S subunit	Putative uncharacterized protein	Formate dehydrogenase-O, iron-sulfur subunit	Formate dehydrogenase, beta subunit precursor	Formate dehydrogenase-O, Fe-S subunit	
ECOLI03756	Formate dehydrogenase-O, major subunit	Formate dehydrogenase-O, major subunit	Formate dehydrogenase-O major subunit	Formate dehydrogenase-O, major subunit	Formate dehydrogenase-O, major subunit	glimmer prediction probable FdoG formate dehydrogenase-O alpha subunit	Formate dehydrogenase-O, major subunit	Residues 1 to 1016 of 1016 are 99 pct identical to residues 1 to 1016 of a 1016 aa protein from Escherichia coli K12 ref: NP_418330.1 formate dehydrogenase-O, major subunit	pseudo	pseudo	Formate dehydrogenase-O, major subunit	Formate dehydrogenase	Code: C; COG: COG0243; selenocysteine formate dehydrogenase-O, major subunit	Code: C; COG: COG0243; selenocysteine formate dehydrogenase-O, major subunit	formate dehydrogenase, major subunit the active-site selenocysteine, residue 197, is encoded by an opal stop codon	Formate dehydrogenase, alpha subunit, anaerobic	Code: C; COG: COG0243; selenocysteine formate dehydrogenase-O, major subunit	Formate dehydrogenase alpha subunit	formate dehydrogenase, alpha subunit identified by match to protein family HMM PF01568; match to protein family HMM TIGR01553	pseudo	Hypothetical protein	Hypothetical protein	formate dehydrogenase, alpha subunit KEGG: bcn:Bcen_4382 formate dehydrogenase, alpha subunit, anaerobic TIGRFAM: formate dehydrogenase, alpha subunit PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region	Formate dehydrogenase alpha subunit	formate dehydrogenase, alpha subunit, selenocysteine-containing selenoprotein; identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; match to protein family HMM TIGR01553; selenocysteine	Formate dehydrogenase-o, major subunit precursor	Molybdopterin oxidoreductase precursor	Formate dehydrogenase-O, major subunit	formate dehydrogenase-O, major subunit Code: C; COG: COG0243; selenocysteine	
ECOLI03756	Formate dehydrogenase-O, major subunit	Formate dehydrogenase-O, major subunit	Formate dehydrogenase-O major subunit	Formate dehydrogenase-O, major subunit	Formate dehydrogenase-O, major subunit	glimmer prediction probable FdoG formate dehydrogenase-O alpha subunit	Formate dehydrogenase-O, major subunit	Residues 1 to 1016 of 1016 are 99 pct identical to residues 1 to 1016 of a 1016 aa protein from Escherichia coli K12 ref: NP_418330.1 formate dehydrogenase-O, major subunit	pseudo	pseudo	Formate dehydrogenase-O, major subunit	Formate dehydrogenase	Code: C; COG: COG0243; selenocysteine formate dehydrogenase-O, major subunit	Code: C; COG: COG0243; selenocysteine formate dehydrogenase-O, major subunit	formate dehydrogenase, major subunit the active-site selenocysteine, residue 197, is encoded by an opal stop codon	Formate dehydrogenase, alpha subunit, anaerobic	Code: C; COG: COG0243; selenocysteine formate dehydrogenase-O, major subunit	Formate dehydrogenase alpha subunit	formate dehydrogenase, alpha subunit identified by match to protein family HMM PF01568; match to protein family HMM TIGR01553	pseudo	Hypothetical protein	Hypothetical protein	formate dehydrogenase, alpha subunit KEGG: bcn:Bcen_4382 formate dehydrogenase, alpha subunit, anaerobic TIGRFAM: formate dehydrogenase, alpha subunit PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region	Formate dehydrogenase alpha subunit	formate dehydrogenase, alpha subunit, selenocysteine-containing selenoprotein; identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; match to protein family HMM TIGR01553; selenocysteine	Formate dehydrogenase-o, major subunit precursor	Molybdopterin oxidoreductase precursor	Formate dehydrogenase-O, major subunit	formate dehydrogenase-O, major subunit Code: C; COG: COG0243; selenocysteine	
ECOLI03757	Protein fdhD	FdhD protein	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	hypothetical formate dehydrogenase subunit fdhD	Protein fdhD homolog	Protein fdhD homolog	Putative uncharacterized protein	FdhD protein	Protein fdhD homolog	Protein fdhD	FORMATE DEHYDROGENASE CHAIN D	Protein fdhD	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Formate dehydrogenase associated protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE FORMATE DEHYDROGENASE ASSOCIATED PROTEIN	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD	similar to AX065597-1|CAC26038.1| percent identity: 77 in 277 aa putative formate dehydrogenase FdhD	formate dehydrogenase (EC 1.2.1.2) chain D	
ECOLI03757	Protein fdhD	FdhD protein	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	hypothetical formate dehydrogenase subunit fdhD	Protein fdhD homolog	Protein fdhD homolog	Putative uncharacterized protein	FdhD protein	Protein fdhD homolog	Protein fdhD	FORMATE DEHYDROGENASE CHAIN D	Protein fdhD	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Formate dehydrogenase associated protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE FORMATE DEHYDROGENASE ASSOCIATED PROTEIN	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD homolog	Protein fdhD	similar to AX065597-1|CAC26038.1| percent identity: 77 in 277 aa putative formate dehydrogenase FdhD	formate dehydrogenase (EC 1.2.1.2) chain D	
ECOLI03758	Uncharacterized protein yiiG	Putative lipoprotein	Putative uncharacterized protein yiiG	putative cytoplasmic protein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative lipoprotein	Putative exported protein	Putative lipoprotein precursor	Conserved protein	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative lipoprotein	Putative cytoplasmic protein	Putative lipoprotein	Putative lipoprotein	
ECOLI03759	Putative frv operon regulatory protein	Transcription regulator	Code: K; COG: COG3711 putative frv operon regulatory protein	Code: K; COG: COG3711 putative frv operon regulatory protein	Transcriptional antiterminator, BglG	Putative phosphotransferase system mannitol/fructose-specific IIA domain	Putative PTS system, IIA component	Predicted regulator	Putative PTS system, IIA component	Transcriptional antiterminator, BglG	Putative PTS system, IIA component	Putative frv operon regulatory protein	Putative transcriptional regulator/PTS system, IIA component	Putative PTS system, IIA component	Putative transcriptional regulator	Putative regulator	Putative regulator	Predicted regulator	Putative regulator	FrvR protein	Putative frv operon regulatory protein	Predicted regulator	Predicted regulator	predicted regulator FrvR	Predicted regulator	Transcription regulator	Putative BglB-family transcriptional antiterminator	
ECOLI03760	Putative frv operon protein frvX	Aminopeptidase from family M42	Endo-1,4-beta-glucanase	Endoglucanase	Peptidase, M42 family	Endo-1,4-beta-glucanase homolog	Endo-1,4-beta-glucanase	hypothetical conserved protein	Frv operon protein	Endo-1,4-beta-glucanase	Residues 3 to 358 of 358 are 97 pct identical to residues 1 to 356 of a 356 aa protein from Escherichia coli K12 ref: NP_418334.1 frv operon protein	Endo-1,4-beta-glucanase	similar to endo-1,4-beta-glucanase (hypothetical) hypothetical protein	conserved gene endo-1,4 beta-glucanase	similar to endo-1,4-beta-glucanase (hypothetical) hypothetical protein	Endo-1,4-beta-glucanase	hypothetical protein, similar to endo-1,4-beta-glucanase	Ortholog of S. aureus MRSA252 (BX571856) SAR2545 conserved hypothetical protein	hypothetical protein, similar to endo-1,4-beta-glucanase	hypothetical protein, similar to endo-1,4-beta-glucanase	identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG1363 aminopeptidase	Similar to Lactococcus lactis glutamyl-aminopeptidase PepA SW:PEPA_LACLC (Q48677) (355 aa) fasta scores: E(): 2.7e-39, 37.39% id in 353 aa, and to Bacillus subtilis hypothetical protein YsdC TR:P94521 (EMBL:Z75208) (361 aa) fasta scores: E(): 2.7e-71, 52.08% id in 359 aa conserved hypothetical protein	Code: G; COG: COG1363 frv operon protein	identified by similarity to EGAD:40297; match to protein family HMM PF05343 glutamyl-aminopeptidase	similar to gi|49484672|ref|YP_041896.1| [Staphylococcus aureus subsp. aureus MRSA252], percent identity 75 in 358 aa, BLASTP E(): e-157 putative peptidase	Code: G; COG: COG1363 frv operon protein	glutamyl-aminopeptidase identified by match to protein family HMM PF05343	predicted M42 glutamyl aminopeptidase COG1363, pfam05343	endo-1,4-beta-glucanase	
ECOLI03761	Fructose-like PTS system EIIBC component	Residues 1 to 485 of 485 are 99 pct identical to residues 1 to 485 of a 485 aa protein from Escherichia coli K12 ref: NP_418335.1 PTS system, fructose-like enzyme IIBC component	PTS, EIIBC	Code: G; COG: COG1299 PTS system, fructose-like enzyme IIBC component	Code: G; COG: COG1299 PTS system fructose-like enzyme IIBC component	PTS system, fructose-like enzyme IIBC component Code: G; COG: COG1299	PTS system, fructose-specfic family, IIBC component	Fused predicted PTS enzymes: IIB component; IIC component	PTS system, fructose-specfic family, IIBC component	PTS system, fructose subfamily, IIC subunit	PTS system, fructose-specfic family, IIBC component	PTS, EIIBC	PTS system, fructose-specfic family, IIBC component	PTS system fructose-specific IIBC components	Fused putative PTS enzymes: IIB component ; IIC component	Fused putative PTS enzymes: IIB component ; IIC component	Fused predicted PTS enzymes: IIB component/IIC component FrvB	Fused putative PTS enzymes: IIB component ; IIC component	FrvB protein	Putative PTS transporter components IIBC	Fused predicted PTS enzymes: IIB component, IIC component	Fused predicted PTS enzymes: IIB component/IIC component	fused predicted PTS enzymes: IIB component/IIC component FrvB	PTS system, IICB component	Fused predicted PTS enzymes: IIB component/IIC component	PTS system, fructose-specfic IIBC component	
ECOLI03762	Fructose-like phosphotransferase enzyme IIA component	PTS system, fructose-specific IIA component	PTS system, EIIa component	PTS system, fructose/mannitol specific IIA subunit	PTS system, fructose-specific IIA component	PTS system, IIA component	Phosphotransferase system mannitol/fructose- specific IIA domain	Lin0376 protein	Residues 1 to 148 of 148 are 99 pct identical to residues 1 to 148 of a 148 aa protein from Escherichia coli K12 ref: NP_418336.1 PTS system, fructose-specific IIA component	PTS, EIIA	truncated PTS fructose-specific enzyme IIABC components, truncated	identified by similarity to SP:P32155; match to protein family HMM PF00359; match to protein family HMM TIGR00848 PTS system, fructose-specific, IIA component, putative	identified by match to protein family HMM PF00359; match to protein family HMM TIGR00848 PTS system, fructose-specific, IIA component	Code: GT; COG: COG1762 PTS system, fructose-specific IIA component	Code: GT; COG: COG1762 PTS system fructose-specific IIA component	putative PTS IIA-like nitrogen-regulatory protein PtsN	PTS system, fructose-specific IIA component Code: GT; COG: COG1762	Putative fructose-specific permease	Putative PTS IIA-like nitrogen-regulatory protein PtsN	PTS system, fructose family, IIA component	Putative PTS IIA-like nitrogen-regulatory protein PtsN	Putative PTS IIA-like nitrogen-regulatory protein PtsN	Putative PTS IIA-like nitrogen-regulatory protein PtsN	PTS system, fructose family, IIA component	Putative PTS IIA-like nitrogen-regulatory protein PtsN	PTS system, fructose family, IIA component	Putative PTS IIA-like nitrogen-regulatory protein PtsN	PTS system, fructose-specific IIA component	PTS system, fructose family, IIA component	
ECOLI03763	L-rhamnose mutarotase	Putative uncharacterized protein Ta0744	L-rhamnose mutarotase	L-rhamnose mutarotase	L-rhamnose mutarotase	L-rhamnose mutarotase	Hypothetical protein yiiL	L-rhamnose mutarotase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	L-rhamnose mutarotase	CDS_ID OB0493 hypothetical protein	hypothetical protein	L-rhamnose mutarotase	Residues 1 to 104 of 104 are 99 pct identical to residues 1 to 104 of a 104 aa protein from Escherichia coli K12 ref: NP_418337.1 orf, conserved hypothetical protein	L-rhamnose mutarotase	L-rhamnose mutarotase	L-rhamnose 1-epimerase	conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	L-rhamnose mutarotase	identified by similarity to OMNI:NTL01LI2957 conserved hypothetical protein	Uncharacterized ACR Hypothetical protein	L-rhamnose mutarotase	Code: S; COG: COG3254 conserved hypothetical protein	Code: S; COG: COG3254 conserved hypothetical protein	protein of unknown function DUF718	Conserved hypothetical protein COG0011 [S] Uncharacterized conserved protein	Code: S; COG: COG3254; orf conserved hypothetical protein	
ECOLI03764	Rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	Sugar-phosphate aldolase	Putative rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	CDS_ID OB0497 rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	Residues 1 to 213 of 213 are 99 pct identical to residues 62 to 274 of a 274 aa protein from Escherichia coli K12 ref: NP_418338.1 rhamnulose-phosphate aldolase	Rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	rhamnulose-1-phosphate aldolase	similar to Salmonella typhimurium rhamnulose-1-phosphate aldolase rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	identified by similarity to SP:P32169; match to protein family HMM PF00596 rhamnulose-1-phosphate aldolase	Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases AraD protein	Rhamnulose-1-phosphate aldolase	identified by similarity to SP:P32169; match to protein family HMM PF00596 rhamnulose-1-phosphate aldolase	Code: G; COG: COG0235 rhamnulose-phosphate aldolase	Code: G; COG: COG0235 rhamnulose-phosphate aldolase	putative rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase COG0235 [G] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases	Code: G; COG: COG0235 rhamnulose-phosphate aldolase	Rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase	
ECOLI03765	L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	PMID: 8396120 PMID: 10891278 best DB hits: BLAST: pir:B48649; L-rhamnose isomerase (EC 5.3.1.14) - Escherichia coli; E=1e-145 embl:CAA43002.1; (X60472) L-rhamnose isomerase [Escherichia coli]; E=1e-145 pdb:1DE5; A Chain A, L-Rhamnose Isomerase ----- pdb: 1DE5 B; E=1e-145 L-rhamnose isomerase	L-rhamnose isomerase	CDS_ID OB0496 L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	Residues 3 to 421 of 421 are 98 pct identical to residues 1 to 419 of a 419 aa protein from Escherichia coli pir: B48649 L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	similar to Salmonella typhi CT18 L-rhamnose isomerase L-rhamnose isomerase	L-rhamnose isomerase	identified by similarity to SP:P32170; match to protein family HMM PF06134; match to protein family HMM TIGR01748 L-rhamnose isomerase	Hypothetical protein	L-rhamnose isomerase	Code: G; COG: COG4806 L-rhamnose isomerase	Code: G; COG: COG4806 L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase COG4806 [G] L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase	L-rhamnose isomerase Code: G; COG: COG4806	
ECOLI03766	Rhamnulokinase	Putative rhamnulokinase	Rhamnulokinase	Rhamnulokinase	Rhamnulokinase	Rhamnulokinase	L-fuculose kinase	Rhamnulokinase	Putative L-fuculose kinase fucK	Rhamnulokinase	PMID: 1659648 best DB hits: BLAST: gb:AAF01486.1; AF137263_5 (AF137263) L-fuculose kinase; E=1e-84 ddbj:BAB05270.1; (AP001512) rhamnulokinase [Bacillus halodurans]; E=3e-79 pir:E70014; rhamnulokinase (EC 2.7.1.5) yulC - Bacillus subtilis; E=8e-75 COG: BH1551; COG1070 Sugar (pentulose and hexulose) kinases; E=2e-80 VNG1967G; COG0554 Glycerol kinase; E=2e-04 BH2676; COG1070 Sugar (pentulose and hexulose) kinases; E=0.004 PFAM: PF00370; FGGY family of carbohydrate kin; E=7.3e-12 PF02782; FGGY family of carbohydrate kin; E=0.11 carbohydrate kinase, FGGY family	Putative rhamnulokinase	Rhamnulokinase	CDS_ID OB0495 rhamnulokinase	Rhamnulokinase	SCF43A.04, probable rhamnose kinase, len: 484 aa; similar to rhamnose kinases e.g. SW:RHAB_ECOLI (EMBL:L19201), rhaB, Escherichia coli rhamnulokinase (489 aa), fasta scores; opt: 1136 z-score: 1280.7 E(): 0, 41.5% identity in 468 aa overlap. Also similar to many other carbohydrate kinases e.g. SW:FUCK_ECOLI (EMBL:X15025), fucK, Escherichia coli L-fuculokinase (482 aa) (27.7% identity in 411 aa overlap). Contains Pfam match to entry PF00370 FGGY, FGGY family of carbohydrate kinases putative rhamnose kinase	Rhamnulokinase	Residues 1 to 489 of 489 are 98 pct identical to residues 1 to 489 of a 489 aa protein from Escherichia coli O157:H7 ref: NP_312858.1 rhamnulokinase	Rhamnulokinase	Rhamnulokinase	IPR000577: Carbohydrate kinase, FGGY rhamnulokinase	similar to Salmonella typhi CT18 rhamnulokinase rhamnulokinase	Rhamnulokinase	identified by similarity to SP:P32171; match to protein family HMM PF00370 rhamnulokinase	Fucose kinase	Similar to Salmonella typhimurium rhamnulokinase RhaB or STM4047 SWALL:RHAB_SALTY (SWALL:P27030) (489 aa) fasta scores: E(): 1e-63, 40.59% id in 468 aa, and to Bacteroides thetaiotaomicron L-fuculose kinase FucK or BT1275 SWALL:Q9RQ11 (EMBL:AF137263) (476 aa) fasta scores: E(): 3.9e-138, 68.87% id in 469 aa, and to Bacteroides thetaiotaomicron L-fuculose kinase FucK or BT1275 SWALL:AAO76382 (EMBL:AF137263) (476 aa) fasta scores: E(): 3.9e-138, 68.87% id in 469 aa putative fuculokinase	Sugar (pentulose and hexulose) kinases XylB protein	Rhamnulokinase	Code: G; COG: COG1070 rhamnulokinase	
ECOLI03767	HTH-type transcriptional activator rhaS	Putative AraC-family transcriptional regulator	Transcriptional regulator, AraC family	AraC-type DNA-binding domain-containing protein	HTH-type transcriptional activator rhaS	HTH-type transcriptional activator rhaS	Transcriptional regulator, AraC/XylS family	Probable AraC-family transcriptional regulator	HTH-type transcriptional activator rhaS	Probable AraC-family transcriptional regulator	HTH-type transcriptional activator rhaS	transcriptional regulator	AraC-type DNA-binding domain-containing protein	AraC-type DNA-binding domain-containing protein	Residues 1 to 278 of 278 are 99 pct identical to residues 1 to 278 of a 278 aa protein from Escherichia coli K12 ref: NP_418341.1 positive regulator for rhaBAD operon	HTH-type transcriptional activator rhaS	Transcription regulator	Xylose operon regulator	IPR000005: Helix-turn-helix, AraC type positive regulator for rhaBAD operon (AraC/XylS family)	similar to Salmonella typhi CT18 L-rhamnose operon regulatory protein L-rhamnose operon regulatory protein	HTH-type transcriptional activator rhaS	AraC-type DNA-binding domain-containing proteins AraC protein	HTH-type transcriptional activator rhaS	identified by match to protein family HMM PF00165 transcriptional regulator, AraC family	Code: K; COG: COG2207 positive regulator for rhaBAD operon	Code: K; COG: COG2207 positive regulator for rhaBAD operon	transcriptional regulator, AraC family	transcriptional regulator, AraC family	AraC-type DNA-binding domain-containing protein COG2207	
ECOLI03769	L-rhamnose-proton symporter	L-rhamnose-proton symporter	L-rhamnose-proton symporter	L-rhamnose-proton symporter	L-rhamnose-proton symporter	Residues 1 to 277 of 277 are 98 pct identical to residues 1 to 277 of a 323 aa protein from Escherichia coli pir: S26145 L-rhamnose transport protein	L-rhamnose-proton symporter	IPR004673: RhaT l-rhamnose-proton symport DMT Superfamily, L-rhamnose:H+ symporter protein	similar to Salmonella typhi CT18 L rhamnose-proton symporter L rhamnose-proton symporter	L-rhamnose-proton symporter	Permeases of the drug/metabolite transporter (DMT) superfamily RhaT protein	L-rhamnose-proton symporter	Code: GER; COG: COG0697 rhamnose transport	Code: GER; COG: COG0697 rhamnose transport	RhaT l-rhamnose-proton symport 2	Code: GER; COG: COG0697 rhamnose transport	L-rhamnose-proton symporter	L-rhamnose-proton symport protein	L-rhamnose-proton symporter	RhaT l-rhamnose-proton symport 2 PFAM: RhaT l-rhamnose-proton symport 2 KEGG: nar:Saro_1049 RhaT L-rhamnose-proton symport 2	L-rhamnose-proton symport protein	L-rhamnose-proton symport protein	L-rhamnose:proton symporter	L-rhamnose/H+ symporter	L-rhamnose/H+ symporter	L-rhamnose-proton symporter	L-rhamnose:H+ symporter	Putative uncharacterized protein	L-rhamnose-proton symporter	
ECOLI03768	HTH-type transcriptional activator rhaR	Transcriptional regulator, AraC family	HTH-type transcriptional activator rhaR	Putative AraC-family transcriptional regulator	HTH-type transcriptional activator rhaR	HTH-type transcriptional activator rhaR	Trancriptional regulator of AraC family	Residues 8 to 319 of 319 are 99 pct identical to residues 1 to 312 of a 312 aa protein from Escherichia coli K12 ref: NP_418342.1 positive regulator for rhaRS operon	L-rhamnose operon transcriptional activator rhaR	Transcriptional regulator protein	transcriptional regulator, AraC/XylS family	IPR000005: Helix-turn-helix, AraC type; IPR007113: Cupin domain positive regulator for rhaRS operon (AraC/XylS familiy)	similar to Salmonella typhi CT18 L-rhamnose operon transcriptional activator L-rhamnose operon transcriptional activator	HTH-type transcriptional activator rhaR	transcriptional regulator, AraC family	Similar to Clostridium acetobutylicum AraC-type DNA-binding domain-containing protein CAC1451 SWALL:Q97J35 (EMBL:AE007656) (295 aa) fasta scores: E(): 3e-11, 25.38% id in 260 aa, and to Bacteroides thetaiotaomicron transcriptional regulator BT3122 SWALL:Q8A333 (EMBL:AE016939) (289 aa) fasta scores: E(): 3.3e-10, 25.09% id in 279 aa putative AraC-family regulatory protein	AraC-type DNA-binding domain-containing proteins AraC protein	Transcriptional regulator, AraC family	HTH-type transcriptional activator rhaR	transcriptional regulator	identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883 transcriptional regulator, AraC family	Putative transcriptional regulator, AraC family	Code: K; COG: COG2207 positive regulator for rhaRS operon	transcriptional regulator, AraC family	Code: K; COG: COG2207 positive regulator for rhaRS operon	unknown identified by match to protein family HMM PF00165	probable transcriptional regulator protein, AraC family similar to AGR_C_1998p [Agrobacterium tumefaciens] and SMc00558 [Sinorhizobium meliloti] Similar to swissprot:Q8UGF7 Putative location:bacterial inner membrane Psort-Score: 0.1468; go_component: intracellular [goid 0005622]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	HTH-type transcriptional activator rhaR	hypothetical protein similarity to COG2207 AraC-type DNA-binding domain-containing proteins	
ECOLI03770	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase [Mn] 1	DEHA2E01232p;similar to uniprot|P79022 Candida sp.HN95 MnSOD Mn- Superoxide Dismutase protein precursor;	Superoxide dismutase	similar to SP:P31844, GB:M22811, PID:1119205, PID:1750112,  and GB:AL009126; identified by sequence similarity; putative superoxide dismutase	Probable Fe-superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase [Mn] 1	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase [Mn] 1	Superoxide dismutase	Putative manganese superoxide dismutase	Superoxide dismutase	Superoxide dismutase	Superoxide dismutase	superoxide dismutase [Mn] 2	Superoxide dismutase	
ECOLI03771	2-keto-3-deoxygluconate permease	pseudo	2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate permease	Residues 1 to 330 of 330 are 99 pct identical to residues 1 to 330 of a 330 aa protein from Escherichia coli K12 ref: NP_418345.1 2-keto-3-deoxy-D-gluconate transport system	InterProMatches:IPR004684; Biological Process: carbohydrate transport (GO:0008643), Molecular Function: 2-keto-3-deoxygluconate:hydrogen symporter activity (GO:0015649), Cellular Component: integral to membrane (GO:0016021) 2-keto-3-deoxygluconate permease	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark 2-keto-3-deoxy-D-gluconate transport system	2-keto-3-deoxygluconate permease	2-keto-3-deoxy-D-gluconate transport system	2-keto-3-deoxy-D-gluconate transport system	2-keto-3-deoxy-D-gluconate transport system	2-keto-3-deoxygluconate transporter	2-keto-3-deoxy-D-gluconate permease	2-keto-3-deoxygluconate permease	2-keto-3-deoxy-D-gluconate transport system identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate permease PFAM: 2-keto-3-deoxygluconate permease KEGG: eci:UTI89_C4493 2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate transporter TIGRFAM: 2-keto-3-deoxygluconate transporter PFAM: 2-keto-3-deoxygluconate permease KEGG: bcn:Bcen_5010 2-keto-3-deoxygluconate transporter	2-keto-3-deoxy-D-gluconate transport system	2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate permease	2-keto-3-deoxy-D-gluconate transporter	2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate permease	2-keto-3-deoxygluconate transporter	
ECOLI03772	Protein yiiM	MOSC-domain containing protein	Putative uncharacterized protein STY3815	Lmo2060 protein	hypothetical protein	Hypothetical protein yiiM	Putative uncharacterized protein	PMID: 10984043 best DB hits: BLAST: pir:E83580; conserved hypothetical protein PA0529 [imported] -; E=1e-34 pir:A69811; conserved hypothetical protein yflK - Bacillus subtilis; E=4e-32 pir:F83366; conserved hypothetical protein PA2229 [imported] -; E=2e-31 COG: PA0529; COG2258 Uncharacterized BCR; E=1e-35 conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	hypothetical conserved protein	Hypothetical Cytosolic Protein	Putative uncharacterized protein yiiM	similar to AL031317-43|CAA20421.1| percent identity: 41 in 202 aa conserved hypothetical protein	BH0616 protein	Lin2166 protein	Residues 1 to 234 of 234 are 99 pct identical to residues 1 to 234 of a 234 aa protein from Escherichia coli K12 ref: NP_418346.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YiiM of Escherichia coli	identified by similarity to OMNI:NTL01SA2222; match to protein family HMM PF03473; match to protein family HMM PF03475 conserved hypothetical protein	identified by match to protein family HMM PF03473 MOSC domain protein	Hypothetical protein SE1912	identified by similarity to GP:29896050; match to protein family HMM PF03473; match to protein family HMM PF03475 MOSC domain protein	Putative uncharacterized protein	conserved hypothetical protein	IPR005163: 3-alpha domain; IPR005302: MOSC domain putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2423 conserved hypothetical protein	
ECOLI03773	Sensor protein cpxA	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Putative sensor protein CpxA	Sensor protein cpxA	Sensor protein	Sensor protein	Sensor protein	Sensor protein	HISTIDINE KINASE SENSOR PROTEIN	lantibiotic biosynthesis protein (sensory transduction protein kinase)	Sensor protein	Sensor protein cpxA	Sensor protein	Residues 1 to 457 of 457 are 99 pct identical to residues 1 to 457 of a 457 aa protein from Escherichia coli O157:H7 ref: NP_312864.1 probable sensor protein in 2-component system CpxA	Sensor protein	Sensor protein	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor histidine kinase	Sensor protein	sensor protein	IPR003660: Histidine kinase, HAMP region; IPR004358: Bacterial sensor protein, C-terminal; IPR005467: Histidine kinase sensory kinase in two-component regulatory system with CpxR, senses misfolded proteins in bacterial envelope	similar to Salmonella typhi CT18 two-component sensor kinase protein two-component sensor kinase protein	Sensor protein	Putative two-component system sensor kinase	
ECOLI03774	Transcriptional regulatory protein cpxR	Two-component response regulatory protein	Transcriptional Regulatory protein cpxR	Two-component response regulator	Transcriptional regulatory protein cpxR	Residues 1 to 232 of 232 are 100 pct identical to residues 1 to 232 of a 232 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290542.1 transcriptional regulator in 2-component system	Two component system response regulatory protein	CpxR protein	Two-component response regulator	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response reguator in two-component regulatory system with CpxA, regulates expression of protein folding and degrading factors (OmpR family)	similar to Salmonella typhi CT18 two-component response regulatory protein two-component response regulatory protein	Transcription factor	Response reguator in two-component regulatory system with CpxA	Code: TK; COG: COG0745 transcriptional regulator in 2-component system	Code: TK; COG: COG0745 transcriptional regulator in 2-component system	Two Component Transcriptional Regulator, LuxR family	two-component response regulator	Code: TK; COG: COG0745 transcriptional regulator in 2-component system	Transcriptional regulatory protein CpxR	Two component system response regulatory protein precursor	Transcriptional regulatory protein CpxR	Two component system response regulatory protein precursor	Two component system response regulatory protein precursor	transcriptional regulator in 2-component system Code: TK; COG: COG0745	Two component system response regulatory protein precursor	transcriptional regulatory protein CpxR CpxR controls the expression of genes involved in protein folding and degradation, DNA-binding response regulator in two-component regulatory system with CpxA	Two component transcriptional regulator, winged helix family	Response regulator in two-component regulatory system with CpxA, regulates expression of stress-related genes	Putative uncharacterized protein	
ECOLI03775	Periplasmic protein cpxP	Hypothetical periplasmic protein CpxP	Periplasmic protein cpxP precursor	Periplasmic protein cpxP, putative	Putative uncharacterized protein yiiO	Residues 1 to 167 of 167 are 100 pct identical to residues 1 to 167 of a 167 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290543.1 yiiO gene product	periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses	similar to Salmonella typhi CT18 extracytoplasmic stress protein for protein-mediated toxicities extracytoplasmic stress protein for protein-mediated toxicities	Periplasmic repressor of cpx regulon by interaction with CpxA	Code: UNTP; COG: COG3678 Uncharacterized periplasmic protein	Code: UNTP; COG: COG3678 Uncharacterized periplasmic protein	conserved hypothetical protein	Code: UNTP; COG: COG3678 Uncharacterized periplasmic protein	Periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses	Putative uncharacterized protein cpxP	Putative exported protein precursor	Uncharacterized periplasmic protein Code: UNTP; COG: COG3678	periplasmic repressor of cpx regulon by interaction with CpxA periplasmic protein combats stress	Putative uncharacterized protein precursor	Periplasmic repressor of cpx regulon by interaction with CpxA	Putative uncharacterized protein	Periplasmic protein CpxP	Periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses precursor	Putative uncharacterized protein precursor	Periplasmic protein combats stress	Periplasmic protein CpxP	Putative uncharacterized protein precursor	Periplasmic protein CpxP	Putative uncharacterized protein	
ECOLI03776	Ferrous-iron efflux pump fieF	Cation efflux family protein	Protein p34	Putative uncharacterized protein	Probable transporter	Putative cation efflux family protein	Cation efflux system protein	Cation-efflux pump fieF	Cation efflux system protein	Cation efflux system protein	Ferrous-iron efflux pump fieF	Cation efflux family protein	Cation-efflux pump fieF	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL TRANSMEMBRANE PROTEIN	Cation efflux family protein	TRANSMEMBRANE TRANSPORT PROTEIN-Predicted Co/Zn/Cd cation transport	Ferrous-iron efflux pump fieF	Residues 7 to 306 of 306 are 99 pct identical to residues 1 to 300 of a 300 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290544.1 putative transport system permease protein	Cation-efflux pump fieF	cation efflux system protein	identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297 cation efflux family protein	Cation efflux protein	Cation efflux system membrane protein	putative CDF family transport protein	similar to Salmonella typhi CT18 putative transmembrane efflux protein putative transmembrane efflux protein	Cation-efflux pump fieF	Cation efflux family protein	cobalt-zinc-cadmium resistance protein CzcD	Predicted Co/Zn/Cd cation transporters MMT1 protein	
ECOLI03777	6-phosphofructokinase isozyme 1	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase 1	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	putative 6-phosphofructokinase	Complete genome, strain HD100; segment 10/11	6-phosphofructokinase	6-phosphofructokinase	identified by match to protein family HMM PF00365 phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase	6-phosphofructokinase (phosphofructokinase) (phosphohexokinase)	
ECOLI03778	Sulfate-binding protein	Sulfate ABC transporter, periplasmic sulfate- binding protein	ABC transporter sulfate binding protein	Sulfate-binding protein	ABC transporter sulfate binding protein	Sulfate-binding protein	Sulfate-binding protein	ABC transporter, substrate binding protein	Periplasmic sulphate binding protein	Sulfate-binding protein	Sulfate-binding protein	Sulfate-binding protein	identified by similarity to SP:P06997; match to protein family HMM PF01547 sulfate ABC transporter, sulfate/thiosulfate-binding protein	similar to GP:15155803, and GP:17983880; identified by sequence similarity; putative sulfate ABC transporter, sulfate-binding protein	Sulfate-binding protein	Sulfate-binding protein	Sulfate ABC transporter, periplasmic sulfate- binding protein	Sulfate-binding protein	Product confidence : putative Gene name confidence : hypothetical putative sulfate uptake ABC transporter periplasmic solute-binding protein precursor, similar to Y11244	Sulfate-binding protein	sulfate ABC transporter sulfate-binding protein	Sulfate ABC transporter, periplasmic sulfate- binding protein	SULFATE-BINDING PROTEIN	Periplasmic sulfate-binding protein	sulfate binding protein of ABC transporter	Sulfate ABC transporter, periplasmic binding protein component	Sulfate ABC transporter	ABC-type sulfate transport system, periplasmic component	Residues 1 to 329 of 329 are 100 pct identical to residues 1 to 329 of a 329 aa protein from Escherichia coli K12 ref: NP_418352.1 periplasmic sulfate-binding protein	
ECOLI03779	CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase	Probable CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol phosphotidylhydrolase	CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase	Residues 65 to 315 of 315 are 98 pct identical to residues 1 to 251 of a 251 aa protein from Escherichia coli O157:H7 ref: NP_312870.1 CDP-diacylglycerol phosphotidylhydrolase	CDP-diacylglycerol pyrophosphatase	CDPdiacylglycerol diphosphatase	Probable CDP-diacylglycerol pyrophosphatase	Mb2311, cdh, len: 260 aa. Equivalent to Rv2289, len: 260 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 260 aa overlap). Probable cdh, CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26), similar to CDH_SALTY|P26219 cdp-diacylglycerol pyrophosphatase (251 aa), FASTA scores: opt: 395, E(): 5.9e-20, (33.5% identity in 221 aa overlap). Probable CDP-diacylglycerol pyrophosphatase Cdh (CDP-diacylglycerol diphosphatase) (CDP-diacylglycerol phosphatidylhydrolase)	CDP-diacylglycerol phosphotidylhydrolase	similar to Salmonella typhi Ty2 CDP-diglyceride hydrolase CDP-diglyceride hydrolase	CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase	Code: I; COG: COG2134 CDP-diacylglycerol phosphotidylhydrolase	Code: I; COG: COG2134 CDP-diacylglycerol phosphotidylhydrolase	CDP-diacylglycerol pyrophosphatase	CDP-diglyceride hydrolase	CDP-diacylglycerol pyrophosphatase precursor	putative CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase	CDP-diacylglycerol pyrophosphatase precursor	CDP-diacylglycerol phosphotidylhydrolase (P06282) CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26) (CDP-diacylglycerol phosphatidylhydrolase) (CDP-diglyceride hydrolase) High confidence in function and specificity	
ECOLI03780	Triosephosphate isomerase	triosephosphate isomerase;	Triose phosphate isomerase, abundant glycolytic enzyme; mRNA half-life is regulated by iron availability; transcription is controlled by activators Reb1p, Gcr1p, and Rap1p through binding sites in the 5' non-coding region.  [Source:SGD;Acc:S000002457]	similar to sp|P00942 Saccharomyces cerevisiae YDR050c TPI1 triose-phosphate isomerase singleton, start by similarity	Triosephosphate isomerase [Source:GeneDB_Spombe;Acc:SPCC24B10.21]	gi|5738720|emb|CAB53017.1 Kluyveromyces lactis triosephosphate isomerase, start by similarity	Triosephosphate isomerase	Triosephosphate isomerase	triose-phosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	TRIOSE PHOSPHATE ISOMERASE;11_0230, TRIOSE PHOSPHATE ISOMERASE, TPIS_SCHJA, gene found by Glimmer;	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	highly similar to uniprot|P00942 Saccharomyces cerevisiae YDR050c TPI1;	DEHA2F06754p;similar to uniprot|P00942 Saccharomyces cerevisiae YDR050C TPI1 induced under stress conditions;	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	Triosephosphate isomerase	
ECOLI03781	Uncharacterized protein yiiQ	Hypothetical protein yiiQ	Putative exported protein	Putative uncharacterized protein yiiQ	Residues 1 to 199 of 199 are 100 pct identical to residues 1 to 199 of a 199 aa protein from Escherichia coli O157:H7 ref: NP_312872.1 orf, conserved hypothetical protein	Putative exported protein	Similar to unknown protein YiiQ of Escherichia coli	putative periplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative exported protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yiiQ	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yiiQ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Conserved protein	
ECOLI03782	Uncharacterized protein yiiR	Predicted membrane protein	Putative membrane protein	Hypothetical protein yiiR	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein VP0241	Uncharacterized protein yiiR	Putative uncharacterized protein	Predicted membrane protein	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1790355 (147 aa). BLAST with identity of 99% in 147 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	Conserved membrane protein	Similar to putative membrane protein YiiR of Escherichia coli	putative inner membrane protein	Conserved membrane protein	Putative inner membrane protein	hypothetical protein	Code: S; COG: COG3152 conserved hypothetical protein	Code: S; COG: COG3152 conserved hypothetical protein	protein of unknown function DUF805	Code: S; COG: COG3152; orf conserved hypothetical protein	Putative uncharacterized protein	Conserved membrane protein	Putative uncharacterized protein yiiR	Conserved membrane protein	protein of unknown function DUF805 PFAM: protein of unknown function DUF805 KEGG: rpc:RPC_0810 protein of unknown function DUF805	Conserved membrane protein precursor	Conserved membrane protein	conserved inner membrane protein	
ECOLI03783	UPF0381 protein yiiS	Putative uncharacterized protein yiiS	Residues 1 to 99 of 99 are 100 pct identical to residues 1 to 99 of a 99 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290551.1 orf, conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3691 conserved hypothetical protein	Code: S; COG: COG3691 conserved hypothetical protein	Code: S; COG: COG3691; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yiiS	conserved hypothetical protein Code: S; COG: COG3691	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yiiS	Putative uncharacterized protein yiiS	Putative uncharacterized protein yiiS	Putative uncharacterized protein yiiS	Putative uncharacterized protein yiiS	Predicted protein	Putative uncharacterized protein yiiS	YiiS protein	
ECOLI03784	Universal stress protein D	Universal stress protein D	Residues 1 to 142 of 142 are 100 pct identical to residues 1 to 142 of a 142 aa protein from Escherichia coli K12 ref: NP_418358.1 putative regulator	Code: T; COG: COG0589 putative regulator	Code: T; COG: COG0589 putative regulator	Code: T; COG: COG0589 putative regulator	Putative uncharacterized protein	Putative uncharacterized protein yiiT	putative regulator Code: T; COG: COG0589	stress-induced protein	Universal stress protein D	Stress-induced protein	Universal stress protein D	UspA domain protein	Universal stress protein D	Universal stress protein D	Universal stress protein D	Putative uncharacterized protein	Stress-induced protein	Stress-induced protein	Stress-induced protein	Stress-induced protein	Stress-induced protein	Stress-induced protein	Stress-induced protein	YiiT protein	Stress-induced protein	Stress-induced protein	stress-induced protein	
ECOLI03785	Ferredoxin--NADP reductase	Probable oxidoreductase	Flavodoxin reductase	Ferredoxin--NADP reductase	hypothetical ferredoxin-NADP reductase	Ferredoxin--NADP reductase	Putative ferredoxin--NADP reductase	Putative ferredoxin--NADP reductase	Ferredoxin--NADP reductase	Ferredoxin--NADP reductase	PMID: 8449868 PMID: 7961651 PMID: 9149148 best DB hits: BLAST: swissprot:P28861; FENR_ECOLI FERREDOXIN--NADP REDUCTASE (FNR); E=3e-10 pdb:1FDR; Flavodoxin Reductase From E. Coli; E=3e-10 pir:F82624; ferredoxin-NADP reductase XF1889 [imported] - Xylella; E=5e-10 COG: fpr; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases); E=3e-11 slr1643; COG0369 Sulfite reductase flavoprotein subunit; E=0.005 PFAM: PF00970; Oxidoreductase FAD-binding doma; E=0.015 PF00175; Oxidoreductase FAD/NAD-binding; E=1.2e-06 probable ferredoxin--NADP reductase	Ferredoxin--NADP reductase	Ferredoxin--NADP reductase	Putative ferredoxin--NADP reductase	Putative ferredoxin-NADP reductase	Ferredoxin-NADP reductase	Ferredoxin--NADP reductase	Flavodoxin reductase family 1 protein	Residues 1 to 248 of 248 are 99 pct identical to residues 1 to 248 of a 248 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290553.1 ferredoxin-NADP reductase	Ferredoxin--NADP reductase	Fpr protein	Ferredoxin--NADP reductase (FNR) (Flavodoxin reductase) FLXR	Ferredoxin--NADP reductase	IPR000531: TonB-dependent receptor protein ferredoxin-NADP reductase	similar to Salmonella typhi CT18 ferredoxin--NADP reductase ferredoxin--NADP reductase	Ferredoxin--NADP reductase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme ferredoxin--NADP+ reductase	Ferredoxin--NADP+ reductase, putative	Ferredoxin-NADP reductase	
ECOLI03786	Fructose-1,6-bisphosphatase class 2	Fructose-1,6-bisphosphatase	Fructose-1,6-bisphosphatase class 2	Putative fructose-1,6-bisphosphatase II	GlpX protein	GlpX	GlpX protein	Putative glycerol metabolic protein	putative GlpX protein	Fructose-1,6-bisphosphatase	Fructose-1,6-bisphosphatase class II glpX	identified by match to TIGR protein family HMM TIGR00330 glpX protein	GlpX protein	Putative glycerol metabolic protein	Fructose-1,6-bisphosphatase	Putative fructose-1,6-bisphosphatase	GLPX PROTEIN	GlpX protein	Putative uncharacterized protein glpX	CDS_ID OB3002 hypothetical protein	similar to AX065039-1|CAC25759.1| percent identity: 91 in 332 aa putative fructose-1,6-bisphosphatase	hypothetical protein	Fructose-1,6-bisphosphatase/sedoheptulose 1,7- bisphosphatase related protein	SCK7.20c, conserved hypothetical protein, len: 343 aa; similar to SW:GLPX_ECOLI (EMBL:Z11767) Escherichia coli hypothetical protein GlpX, 336 aa; fasta scores: opt: 789 z-score: 868.1 E(): 0; 46.5% identity in 325 aa overlap conserved hypothetical protein GlpX	Fructose-1,6-bisphosphatase/sedoheptulose 1,7- bisphosphatase	Glycerol-inducible protein	Residues 1 to 336 of 336 are 100 pct identical to residues 1 to 336 of a 336 aa protein from Escherichia coli K12 ref: NP_418360.1 orf, conserved hypothetical protein	pseudo	fructose-1,6-bisphosphatase	
ECOLI03787	Glycerol kinase	Glycerol kinase, converts glycerol to glycerol-3- phosphate; glucose repression of expression is mediated by Adr1p and Ino2p-Ino4p; derepression of expression on non- fermentable carbon sources is mediated by Opi1p and Rsf1p.  [Source:SGD;Acc:S000001024]	similar to sp|Q63060 Rattus norvegicus Glycerol kinase (EC 2.7.1.30), start by similarity	Glycerol kinase	Glycerol kinase 1	Glycerol kinase	glycerol kinase, putative	Glycerol kinase	Glycerol kinase	Glycerol kinase	Glycerol kinase	Glycerol kinase	similar to uniprot|P32190 Saccharomyces cerevisiae YHL032c GUT1 glycerol kinase;	DEHA2G24310p;highly similar to uniprot|Q6TNG4 Pichia farinosa GUT1 Glycerol kinase GUT1;	Glycerol kinase	Glycerol kinase	Glycerol kinase	Putative glycerol kinase	Glycerol kinase	Glycerol kinase	Glycerol kinase	Glycerol kinase	Glycerol kinase	Glycerol kinase	Glycerol kinase	Glycerol kinase 1	Glycerol kinase 2	Glycerol kinase	Glycerol kinase	
ECOLI03788	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein	GlpF	Glycerol uptake facilitator protein	Glycerol uptake facilitator	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein	GlpF protein	putative glycerol uptake facilitator protein	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein GlpF	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein	2SCD60.23c, probable transport integral membrane protein, len: 296 aa; similar to SW:AQP3_HUMAN (EMBL:AB001325) Homo sapiens aquaporin 3 Aqp3, 292 aa; fasta scores: opt: 571 z-score: 644.7 E(): 2.4e-28; 40.4% identity in 275 aa overlap. Contains Pfam match to entry PF00230 MIP, Major intrinsic protein and match to Prosite entry PS00221 MIP family signature putative transport integral membrane protein	Glycerol uptake facilitator and related permeases	Glycerol uptake facilitator	GlpF protein	Residues 1 to 214 of 214 are 100 pct identical to residues 1 to 214 of a 281 aa protein from Shigella flexneri emb: CAA77815.2 amber stop sodon	Glycerol uptake facilitator protein	Glycerol uptake facilitator	glycerol uptake facilitator protein	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein	Glycerol uptake facilitator	IPR000425: MIP family MIP channel, glycerol diffusion	similar to Salmonella typhi CT18 glycerol uptake facilitator protein glycerol uptake facilitator protein	
ECOLI03789	Cell division protein zapB	Cell division protein zapB	Uncharacterized protein conserved in bacteria	Cell division protein zapB	conserved hypothetical protein	Hypothetical protein yiiU	Cell division protein zapB	Putative uncharacterized protein	Cell division protein zapB	Cell division protein zapB	Cell division protein zapB	Cell division protein zapB	Residues 7 to 87 of 87 are 100 pct identical to residues 1 to 81 of a 81 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290557.1 orf, conserved hypothetical protein	Cell division protein zapB	Cell division protein zapB	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Cell division protein zapB	transcriptional regulator	Similar to: HI0668 conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Cell division protein zapB	conserved hypothetical protein	Code: S; COG: COG3074 conserved hypothetical protein	Code: S; COG: COG3074 conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3074; orf conserved hypothetical protein	Cell division protein zapB	
ECOLI03790	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A protein 2	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	putative S-adenosylmethionine:2-demethylmenaquinone methyltransferase	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A protein 2	Regulator of ribonuclease activity A protein 2	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A protein 2	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A protein 2	Residues 1 to 161 of 161 are 100 pct identical to residues 1 to 161 of a 161 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290560.1 orf, conserved hypothetical protein	Regulator of ribonuclease activity A	Regulator of ribonuclease activity A	S-adenosylmethionine:2-demethylmenaquinone methyltransferase	putative methyltransferase in menaquinone biosynthesis protein	similar to Salmonella typhi CT18 menaquinone biosynthesis protein menaquinone biosynthesis protein	Regulator of ribonuclease activity A	Evidence 2b : Function of strongly homologous gene; Product type e : enzyme S-adenosylmethionine,2-demethylmenaquinone methyltransferase	Regulator of ribonuclease activity A	
ECOLI03791	1,4-dihydroxy-2-naphthoate octaprenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase	Menaquinone biosynthesis	1,4-dihydroxy-2-naphthoate octaprenyltransferase	Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase	Prenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase, putative	MenA	1,4-dihydroxy-2-naphthoate octaprenyltransferase, putative	1;4-dihydroxy-2-naphthoate octaprenyltransferase	Menaquinone biosynthetic protein	DHNA phythltransferase	Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase	Lmo1677 protein	1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE	Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase	hypothetical 1,4-dihydroxy-2-naphthoate octaprenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase	14-dihydroxy-2-naphthoate octaprenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase, putative	1,4-dihydroxy-2-naphthoate octaprenyltransferase	1,4-dihydroxy-2-naphthodate octaprenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase	1,4-dihydroxy-2-naphtoic acid prenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase	Putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase	
ECOLI03792	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	Heat shock protein HslVU, ATPase subunit HslU	putative ATP-dependent protease HslVU, ATPase subunit	ATP-dependent hsl protease ATP-binding subunit hslU	ATP-dependent hsl protease ATP-binding subunit hslU	identified by match to protein family HMM TIGR00390 ATP-dependent hsl protease, ATP-binding subunit hslU	similar to GB:X54941, SP:P33551, and PID:29977; identified by sequence similarity; putative heat shock protein HslVU, ATPase subunit HslU	
ECOLI03793	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	Probable ATP-dependent protease HslV, protease subunit	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	ATP-dependent protease hslV	putative protease HslVU, subunit HslV	ATP-dependent protease hslV	ATP-dependent protease hslV	
ECOLI03794	Cell division protein ftsN	Cell division protein ftsN	Cell division protein	Essential cell division protein	Residues 1 to 319 of 319 are 99 pct identical to residues 1 to 319 of a 319 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290564.1 essential cell division protein	Cell division protein	Cell division protein FtsN	essential cell division protein	similar to Salmonella typhi CT18 cell division protein cell division protein	Cell division protein	Cell division protein FtsN protein	Essential cell division protein	possible cell division protein	Code: D; COG: COG3087 essential cell division protein	Code: D; COG: COG3087 essential cell division protein	cell division protein	Code: D; COG: COG3087 essential cell division protein	Cell division protein FtsN	Cell division protein	Essential cell division protein	Sporulation domain protein PFAM: Sporulation domain protein KEGG: bur:Bcep18194_A6263 cell division protein	Possible cell division protein	Cell division protein	cell division protein identified by match to protein family HMM PF05036	Cell division protein precursor	Cell division protein, FtsN	Hypothetical protein	essential cell division protein Code: D; COG: COG3087	Cell division protein	
ECOLI03795	HTH-type transcriptional repressor cytR	HTH-type transcriptional repressor cytR	Transcriptional repressor, LacI family	Transcriptional repressor	Transcriptional repressor, LacI family	HTH-type transcriptional repressor cytR	Residues 3 to 343 of 343 are 99 pct identical to residues 1 to 341 of a 341 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290565.1 regulator for deo operon, udp, cdd, tsx, nupC, and nupG	Transcriptional repressor	IPR000843: Bacterial regulatory protein LacI, HTH motif transcriptional repressor (GalR/LacI family)	similar to Salmonella typhi CT18 transcriptional repressor transcriptional repressor	LacI family transcriptional repressor, CytR	transcriptional repressor CytR	GalR/LacI family transcriptional repressor	Code: K; COG: COG1609 regulator for deo operon, udp, cdd, tsx, nupC, and nupG	regulator for deo operon, udp, cdd, tsx, nupC, and nupG; Code: K; COG: COG1609 CytR	Code: K; COG: COG1609 regulator for deo operon, udp, cdd, tsx, nupC, and nupG	Transcriptional repressor CytR	Transcriptional repressor	Dual DNA-binding transcriptional regulator	Transcriptional repressor	Transcriptional repressor	Transcriptional repressor cytR Code: K; COG: COG1609	Transcriptional repressor	transcriptional repressor CytR regulator for deo operon, udp, cdd, tsx, nupC, and nupG	Transcriptional regulator, LacI family	Regulator for deo operon, udp, cdd, tsx, nupC, and nupG	Putative uncharacterized protein	Transcriptional repressor CytR	Transcriptional regulator, LacI family	
ECOLI03796	Primosomal protein N'	Primosomal protein N'	Primosomal protein n`	Primosomal protein N'	Primosomal protein N'	Primosomal protein N'	Primosomal protein N'	similar to SP:P17888; identified by sequence similarity; putative primosomal protein N`	Primosomal protein N'	Primosomal protein N'	Putative primosomal protein	Probable primosomal protein N'	Primosomal protein N'	Primosomal protein N'	Primosomal protein N'	Primosomal protein N'	Primosomal protein N'	Primosomal protein n`	PriA	Primosomal protein N'	Primosomal protein N'	Primosomal protein N'	Primosomal protein N'	Primosomal protein N'	Primosomal protein N'	Primosomal protein replication factor	Primosomal protein N'	PriA protein	Primosomal protein N'	
ECOLI03797	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	putative ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	50S ribosomal protein L31	
ECOLI03798	Uncharacterized protein yiiX	Hypothetical protein yiiX	Putative uncharacterized protein yiiX	Residues 1 to 202 of 202 are 98 pct identical to residues 1 to 202 of a 202 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290574.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yiiX	conserved hypothetical protein non-cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein non-cytoplasmic protein	protein of unknown function DUF1105 PFAM: protein of unknown function DUF1105 KEGG: ecc:c4890 hypothetical protein YiiX precursor	conserved hypothetical protein identified by match to protein family HMM PF06520	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted peptidoglycan peptidase	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative peptidoglycan peptidase	Putative peptidoglycan peptidase	pseudo	Putative peptidoglycan peptidase	
ECOLI03799	Met repressor	Met repressor	Met repressor	Met repressor	putative met repressor	Met repressor	Met repressor	Met repressor	Met repressor	Met repressor	Met repressor	Met repressor	Residues 16 to 120 of 120 are 100 pct identical to residues 1 to 105 of a 105 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290575.1 repressor of all met genes but metF	Met repressor	Met repressor	IPR002084: Methionine repressor MetJ transcriptional repressor of all met genes but metF (MetJ family)	similar to Salmonella typhi CT18 repressor of the methionine regulon repressor of the methionine regulon	Met repressor	Met repressor	Met regulon regulatory protein metJ; Similar to: HI0294, METJ_HAEIN Met repressor	Transcriptional regulator of met regulon MetJ protein	Transcriptional regulator of met regulon (repressor)	Met repressor	identified by similarity to SP:P08338 met repressor	met repressor	Code: KE; COG: COG3060 repressor of all met genes but metF	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11448880, 12079333; Product type r : regulator transcriptional repressor for methionine biosynthesis (MetJ family)	repressor of all met genes but metF; Code: KE; COG: COG3060 MetJ	methionine regulon repressor	
ECOLI03800	Cystathionine gamma-synthase	Putative Cystathionine gamma-synthase	Cystathionine gamma-synthase	putative cystathionine gamma-synthase	Cystathionine gamma-synthase	identified by match to protein family HMM PF01053 cystathionine beta-lyase	Cystathionine gamma-synthase	Cystathionine gamma-synthase	Cystathionine gamma-synthase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE CYSTATHIONINE GAMMA-SYNTHASE PROTEIN	cystathionine gamma-synthase(O-succinylhomoserine (thiol)-lyase)	Cystathionine gamma-synthase	Cystathionine gamma-synthase	Residues 60 to 445 of 445 are 99 pct identical to residues 1 to 386 of a 386 aa protein from Escherichia coli K12 ref: NP_418374.1 cystathionine gamma-synthase	pseudo	Cystathionine gamma-synthase (CGS) (O- succinylhomoserine	Biological Process: amino acid metabolism (GO:0006520) putative Cystathionine beta-lyase	Cystathionine gamma-synthase	IPR000277: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes cystathionine gamma-synthase	similar to Salmonella typhi CT18 cystathionine gamma-synthase cystathionine gamma-synthase	Cystathionine gamma-synthase	Cystathionine gamma-synthase	cystathionine gamma-synthase	identified by similarity to SP:P00935; match to protein family HMM PF01053; match to protein family HMM TIGR02080 cystathionine gamma-synthase	ortholog to Escherichia coli bnum: b3939; MultiFun: Metabolism 1.1.3.7, 1.5.1.9, 1.7.30 cystathionine gamma-synthase	O-succinylhomoserine (thiol)-lyase	Code: E; COG: COG0626 cystathionine gamma-synthase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2405903, 3910040; Product type e : enzyme cystathionine gamma-synthase, PLP-dependent	Code: E; COG: COG0626 cystathionine gamma-synthase	
ECOLI03801	Bifunctional aspartokinase/homoserine dehydrogenase 2	Aspartokinase II	putative aspartokinase II/homoserine dehydrogenase, methionine-sensitive	AKII-HDII protein	Aspartokinase II/homoserine dehydrogenase, methionine-sensitive	Aspartokinase II/homoserine dehydrogenase, methionine-sensitive	Bifunctional aspartokinase/homoserine dehydrogenase II	Aspartokinase II/homoserine dehydrogenase, methionine-sensitive	Aspartokinase II and homoserine dehydrogenase II	Homoserine dehydrogenase	Residues 1 to 810 of 810 are 99 pct identical to residues 1 to 810 of a 810 aa protein from Escherichia coli K12 ref: NP_418375.1 aspartokinase II and homoserine dehydrogenase II	Bifunctional aspartokinase/homoserine dehydrogenase II	Bifunctional aspartokinase/homoserine dehydrogenase II	in bifunctional enxyme: aspartokinase II; homoserine dehydrogenase II; IPR001341: Aspartate kinase; IPR001342: Homoserine dehydrogenase aspartokinase II	similar to Salmonella typhi CT18 bifunctional aspartokinase II/homoserine dehydrogenase IIcan I write bifunctional aspartokinase II/homoserine dehydrogenase IIcan I write	Bifunctional aspartokinase/homoserine dehydrogenase II	homoserine dehydrogenase aspartokinase	homoserine dehydrogenase II Aspartokinase II	Aspartokinase II	identified by similarity to SP:P00562; match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF03447 aspartokinase/homoserine dehydrogenase II	homoserine dehydrogenase II; Code: E; COG: COG0527 aspartokinase II	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3910040, 6298218; Product type e : enzyme bifunctional: aspartokinase II (N-terminal); homoserine dehydrogenase II (C-terminal), methionine sensitive	aspartokinase II and homoserine dehydrogenase II; Code: E; COG: COG0527 MetL	Code: E; COG: COG0527 aspartokinase II and homoserine dehydrogenase II	Aspartokinase/homoserine dehydrogenase II	Aspartate kinase., Homoserine dehydrogenase	Aspartate kinase	Bifunctional aspartokinase/homoserine dehydrogenase II	Aspartate kinase	
ECOLI03802	5,10-methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	5,10-methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	5,10-methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	5,10-methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	putative 5,10-methylenetetrahydrofolate reductase	5,10-methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	identified by match to TIGR protein family HMM TIGR00676 5,10-methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	Methylenetetrahydrofolate reductase	
ECOLI03803	Catalase-peroxidase	Catalase-peroxidase	Catalase-peroxidase	Catalase-peroxidase	Catalase-peroxidase	Catalase-peroxidase	Peroxidase/catalase	Catalase-peroxidase	Catalase-peroxidase	Catalase-peroxidase	Peroxidase/catalase	peroxidase/catalase	Catalase-peroxidase	PMID: 2670897 best DB hits: BLAST: swissprot:P14412; CATA_BACST PEROXIDASECATALASE; E=0.0 ddbj:BAA36976.1; (AB020064) catalase [Bacillus; E=0.0 ddbj:BAA36977.1; (AB020065) catalase [Bacillus; E=0.0 COG: BH0906; COG0376 Catalase (peroxidase I); E=0.0 PFAM: PF00141; Peroxidase; E=2.4e-87 peroxidase/catalase	glimmer prediction; highly similar to catalase/peroxidase from Streptomyces reticuli, CAA74698 catalase/peroxidase	Catalase-peroxidase	catalase/peroxidase	catalase	Peroxidase/catalase	Catalase-peroxidase 1	catalase/peroxidase	Catalase-peroxidase	Catalase-peroxidase	Residues 14 to 739 of 739 are 99 pct identical to residues 1 to 726 of a 726 aa protein from Escherichia coli O157:H7 ref: NP_312898.1 hydroperoxidase HPI(I)	identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198 catalase/peroxidase HPI	Catalase-peroxidase	Catalase-peroxidase	Catalase-peroxidase	Mb1943c, katG, len: 740 aa. Equivalent to Rv1908c, len: 740 aa, from Mycobacterium tuberculosis strain H37Rv (99.9% identity in 740 aa overlap). katG, catalase-peroxidase-peroxynitritase T (EC 1.11.1.6) (see citations below), HPI. FASTA results: Q57215 CATALASE-PEROXIDASE from Mycobacterium tuberculosis (740 aa) opt: 5081, E(): 0, (100% identity in 740 aa overlap).  Contains peroxidases active site signature (PS00436) and ATP/GTP-binding site motif A (P-loop; PS00017). Cosmid sequence was corrected to agree with a sequencing read from the H37Rv genome. DELETIONS OR DEFECTS IN KATG GENE CAUSE ISONIAZID (INH) RESISTANCE. BELONGS TO THE PEROXIDASE FAMILY. BACTERIAL PEROXIDASE/CATALASE SUBFAMILY. KATG TRANSCRIPTION SEEMS TO BE REGULATED BY FURA|Rv1909c PRODUCT. The catalase-peroxidase activity is associated with the amino-terminal domain but no definite function has been assigned to the carboxy-terminal domain. CATALASE-PEROXIDASE-PEROXYNITRITASE T KATG	
ECOLI03804	Uncharacterized inner membrane transporter yiJE	Putative uncharacterized protein	Integral membrane protein	hypothetical protein	Transporter	S-adenosylmethionine uptake transporter	Transporter	Conserved hypothetical membrane protein	Inner membrane transport protein yijE	S-adenosylmethionine uptake transporter	Membrane protein, putative	Putative membrane protein	Putative transmembrane protein	Putative uncharacterized protein yijE	hypothetical protein	Predicted permease	S-adenosylmethionine uptake transporter	Residues 1 to 312 of 312 are 99 pct identical to residues 1 to 312 of a 312 aa protein from Escherichia coli O157:H7 ref: NP_312899.1 orf, conserved hypothetical protein	permease, drug/metabolite transporter (DMT) superfamily	Probable transmembrane protein	putative membrane protein, similar to permease of the drug/metabolite transporter (DMT) superfamily hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein TTHA1661	Archaeal membrane protein	Protein of unknown function DUF6, transmembrane	Protein of unknown function DUF6, transmembrane	S-adenosylmethionine transporter	Code: GER; COG: COG0697 conserved hypothetical protein	Code: GER; COG: COG0697 conserved hypothetical protein	
ECOLI03805	Uncharacterized protein yijF	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein yijF	Putative uncharacterized protein yijF	putative periplasmic protein	Putative periplasmic protein	Code: S; COG: COG3738 conserved hypothetical protein	identified by similarity to GB:AAK02119.1 conserved domain protein	Code: S; COG: COG3738 conserved hypothetical protein	uncharacterized protein conserved in bacteria COG3738	Code: S; COG: COG3738; orf conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit	hypothetical protein similarity to COG3738 Uncharacterized BCR(Evalue: 1E-24)	Hypothetical protein	Putative uncharacterized protein yijF	putative periplasmic protein	conserved hypothetical protein Code: S; COG: COG3738	protein of unknown function DUF1287 PFAM: protein of unknown function DUF1287 KEGG: hch:HCH_06899 hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	NADH:ubiquinone oxidoreductase, Na	NADH:ubiquinone oxidoreductase, na	Putative uncharacterized protein	
ECOLI03806	Glycerol dehydrogenase	Glycerol-1-phosphate dehydrogenase	Sn-glycerol-1-phosphate dehydrogenase	Glycerol-1-phosphate dehydrogenase	Glycerol-1-phosphate dehydrogenase	Glycerol dehydrogenase	Glycerol dehydrogenase	Glycerol dehydrogenase	Glycerol dehydrogenase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE GLYCEROL DEHYDROGENASE PROTEIN	Glycerol dehydrogenase	Putative glycerol dehydrogenase	Glycerol dehydrogenase	Glycerol dehydrogenase,	CDS_ID OB0323 glycerol dehydrogenase	similar to Escherichia coli K12 glycerol dehydrogenase, (NAD) gi: 1790381 (381 aa). BLAST with identity of 97% in 380 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	glycerol-1-phosphate dehydrogenase	identified by similarity to SP:P32665; match to protein family HMM PF00465 glycerol dehydrogenase	Glycerol dehydrogenase	glycerol dehydrogenase	Glycerol dehydrogenase	glycerol dehydrogenase	IPR001670: Iron-containing alcohol dehydrogenase; IPR002086: Aldehyde dehydrogenase glycerol dehydrogenase, NAD	similar to Salmonella typhi CT18 glycerol dehydrogenase glycerol dehydrogenase	Putative uncharacterized protein gbs0321	identified by match to PFAM protein family HMM PF00465 glycerol dehydrogenase	Putative glycerol dehydrogenase	best blastp match gb|AAK34712.1| (AE006625) putative glycerol dehydrogenase [Streptococcus pyogenes M1 GAS] putative glycerol dehydrogenase	Glycerol dehydrogenase, NAD+ dependent	
ECOLI03807	Fructose-6-phosphate aldolase 2	Fructose-6-phosphate aldolase 2	Fructose-6-phosphate aldolase 2	IPR001585: Transaldolase putative transaldolase	similar to Salmonella typhi CT18 putative transaldolase putative transaldolase	Probable fructose-6-phosphate aldolase	Code: G; COG: COG0176 putative transaldolase	Code: G; COG: COG0176 putative transaldolase	Code: G; COG: COG0176 putative transaldolase	Fructose-6-phosphate aldolase 2	Fructose-6-phosphate aldolase 2	fructose-6-phosphate aldolase 2	Probable fructose-6-phosphate aldolase	Probable Transaldolase	Putative uncharacterized protein	Fructose-6-phosphate aldolase 2	Fructose-6-phosphate aldolase 2	Fructose-6-phosphate aldolase 2	Transaldolase	Fructose-6-phosphate aldolase 2	Putative uncharacterized protein	Transaldolase	Putative uncharacterized protein	Putative transaldolase	Putative transaldolase	Fructose-6-phosphate aldolase 2	Putative transaldolase	Fructose-6-phosphate aldolase 2	Fructose-6-phosphate aldolase 2	
ECOLI03808	Multiphosphoryl transfer protein 2	PEP-protein phosphotransferase system enzyme I	similar to Escherichia coli K12 PEP-protein phosphotransferase system enzyme I gi: 1790383 (712 aa).  BLAST with identity of 97% in 711 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Putative phosphoenolpyruvate-protein phosphotransferase	IPR000032: Phosphocarrier HPr protein; IPR000121: PEP-utilizing enzyme; IPR001020: HPr histidine phosphorylation site;IPR002178: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;IPR008279: PEP-utilising enzyme, mobile region General PTS family, enzyme I	General PTS family, enzyme I, phosphohistidine domain	General PTS family enzyme I	Code: G; COG: COG1080 PEP-protein phosphotransferase system enzyme I	Code: G; COG: COG1080 PEP-protein phosphotransferase system enzyme I	Code: G; COG: COG1080 PEP-protein phosphotransferase system enzyme I	Phosphoenolpyruvate-protein phosphotransferase PtsA	Putative phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase ptsA	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	phosphoenolpyruvate-protein phosphotransferase PtsA PTS family Hpr	Multi-phosphoryl transfer protein 2	Fused predicted PTS enzymes: Hpr component; enzyme I component; enzyme IIA component	Phosphocarrier, HPr family	Multi-phosphoryl transfer protein 2	Phosphoenolpyruvate-protein phosphotransferase	Multi-phosphoryl transfer protein 2	Phosphoenolpyruvate-protein kinase	Phosphotransferase system, fructose-specific EI/HPr/EIIA components	Putative uncharacterized protein	Putative uncharacterized protein	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	Phosphoenolpyruvate-protein phosphotransferase	
ECOLI03809	Fructose-like permease IIC component 2	Lmo0632 protein	PTS system, fructose-like-2 IIC component	PTS system, fructose-specific IIBC component	PTS system, fructose-specific IIBC component	Partial phosphotransferase system enzyme II component	Phosphotransferase system fructose-specific component IIB	Residues 8 to 366 of 366 are 99 pct identical to residues 1 to 359 of a 359 aa protein from Escherichia coli K12 ref: NP_418384.1 PTS system, fructose-like enzyme II component	PTS system, IIC component	Protein-N p-phosphohistidine-sugar phosphotransferase	PTS system fructose-like IIC component	PTS system fructose-like IIC component	identified by similarity to SP:P32672; match to protein family HMM PF02378; match to protein family HMM TIGR01427 PTS system, fructose-specific, IIC component, putative	PTS system, fructose-like enzyme IIC component	PTS system fructose-like IIC component	Code: G; COG: COG1299 PTS system, fructose-like enzyme II component	Code: G; COG: COG1299 PTS system fructose-like enzyme II component	Code: G; COG: COG1299 PTS system, fructose-like enzyme II component	PTS system, fructose-like-2 IIC component	PTS system, IIC component	PTS system fructose-like-2 IIC component	PTS system, IIC component	PTS system, IIc component	Complete genome	PTS system, fructose-like enzyme II component Code: G; COG: COG1299	PTS system, IIC component	PTS system, fructose-like-2 IIC component	PTS system, fructose family, IIC component	PTS system, fructose subfamily, IIC subunit	
ECOLI03810	Fructose-like phosphotransferase enzyme IIB component 2	Fructose-like phosphotransferase enzyme IIB component 2	Fructose-like phosphotransferase enzyme IIB component 2	Residues 1 to 106 of 106 are 100 pct identical to residues 1 to 106 of a 106 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290587.1 PTS system fructose-like IIB component 1	PTS system, IIB component	PTS system, fructose-like-2 IIB component 1	PTS system fructose-like IIB component 1	PTS system fructose-like IIB component 1	PTS system fructose-like IIB component 1	Code: G; COG: COG1445 PTS system fructose-like IIB component 1	Code: G; COG: COG1445 PTS system fructose-like IIB component 1	PTS system, fructose-like-2 IIB component 1	PTS system, IIB component precursor	PTS system fructose-like IIB component 1	PTS system, IIB component precursor	phosphotransferase system enzyme II , fructose-specific identified by match to protein family HMM PF02379; match to protein family HMM TIGR00829	PTS system fructose-like IIB component 1 Code: G; COG: COG1445	PTS system, IIB component precursor	PTS system, fructose family, IIB component	Predicted enzyme IIB component of PTS	PTS system, fructose-specific EIIB component 2	PTS system, fructose family, IIB component	PTS system, fructose-specific, IIB subunnit precursor	PTS system, fructose family, IIB component	Putative uncharacterized protein	Putative uncharacterized protein	PTS system, fructose-specific, IIB subunnit precursor	PTS system, fructose-specific, IIB subunnit precursor	PTS system, fructose-specific, IIB subunnit precursor	
ECOLI03811	Formate acetyltransferase 2	Pyruvate formate-lyase 2	Probable formate C-acetyltransferase	Formate acetyltransferase 2	Formate acetyltransferase 2	Residues 1 to 765 of 765 are 99 pct identical to residues 1 to 765 of a 765 aa protein from Escherichia coli K12 ref: NP_418386.1 formate acetyltransferase 2	Putative pyruvate formate lyase II	Code: C; COG: COG1882 formate acetyltransferase 2	Code: C; COG: COG1882 formate acetyltransferase 2	Formate acetyltransferase 2	Formate acetyltransferase 2	formate acetyltransferase 2 Code: C; COG: COG1882	putative formate acetyltransferase 2	Formate C-acetyltransferase	Formate C-acetyltransferase	Putative pyruvate formate lyase	Pyruvate formate-lyase	Formate C-acetyltransferase	Formate acetyltransferase	Formate C-acetyltransferase	Predicted glycyl radical enzyme	Predicted formate acetyltransferase 2	Formate acetyltransferase	Formate C-acetyltransferase	Formate C-acetyltransferase	Pyruvate formate-lyase	Formate C-acetyltransferase 2	Putative uncharacterized protein	Formate acetyltransferase	
ECOLI03812	Pyruvate formate-lyase 2-activating enzyme	Pyruvate formate-lyase activating enzyme	Pyruvate formate-lyase 2 activating enzyme	Probable pyruvate formate lyase activating enzyme 2	Residues 1 to 308 of 308 are 99 pct identical to residues 8 to 315 of a 315 aa protein from Escherichia coli gb: AAC43058.1 similar to E. coli pyruvate formate-lyase activating enzyme	IPR001989: Radical-activating enzyme putative pyruvate formate lyase activating enzyme 2	Putative pyruvate formate lyase activating enzyme 2	Code: O; COG: COG1180 probable pyruvate formate lyase activating enzyme 2	Code: O; COG: COG1180 probable pyruvate formate lyase activating enzyme 2	Code: O; COG: COG1180 probable pyruvate formate lyase activating enzyme 2	Pyruvate formate-lyase 2 activating enzyme	Pyruvate formate-lyase 2 activating enzyme	anaerobic ribonucleoside-triphosphate reductase activating protein KEGG: mbu:Mbur_2126 ribonucleoside-triphosphate reductase, anaerobic-like protein TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein PFAM: Radical SAM domain protein SMART: Elongator protein 3/MiaB/NifB	putative pyruvate formate-lyase 3 activating enzyme	probable pyruvate formate lyase activating enzyme 2 Code: O; COG: COG1180	pyruvate formate-lyase 2 activating enzyme	Glycyl-radical enzyme activating protein family	Pyruvate formate lyase II activase	Glycyl-radical enzyme activating protein family	Glycyl-radical enzyme activating protein family	Glycyl-radical enzyme activating protein family	Putative uncharacterized protein	Putative uncharacterized protein	Glycyl-radical enzyme activating protein family	Glycyl-radical enzyme activating protein family	Glycyl-radical enzyme activating protein family	Pyruvate formate-lyase 2-activating enzyme	Pyruvate formate-lyase 2 activating enzyme	Glycyl-radical enzyme activating protein family	
ECOLI03814	Uncharacterized HTH-type transcriptional regulator yijO	Putative AraC-family transcriptional regulator	Transcriptional regulator	Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	putative transcriptional regulator	Hypothetical transcriptional regulator yijO	probable transcriptional regulator	Putative ARAC-type regulatory protein	Residues 1 to 283 of 283 are 98 pct identical to residues 1 to 283 of a 283 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290591.1 putative ARAC-type regulatory protein	Putative transcriptional regulator	Probable transcriptional regulator, AraC family	IPR000005: Helix-turn-helix, AraC type paral putative regulator (AraC/XylS family)	similar to Salmonella typhi CT18 putative AraC-family transcriptional regulator putative AraC-family transcriptional regulator	Putative transcriptional regulator	transcriptional regulator, AraC family	Putative AraC/XylS family regulator	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Hypothetical transcriptional regulator YijO	Putative transcriptional regulator	Hypothetical transcriptional regulator YijO	transcriptional regulator, AraC family	Transcriptional regulator	putative ARAC-type regulatory protein Code: K; COG: COG2207	Transcriptional regulator	predicted DNA-binding transcriptional regulator	transcriptional regulator, AraC family	
ECOLI03813	Fructose-like phosphotransferase enzyme IIB component 3	PTS system, fructose-like-2 IIB component 2	PTS system fructose-like IIB component 2	Residues 1 to 113 of 113 are 99 pct identical to residues 1 to 113 of a 113 aa protein from Escherichia coli K12 ref: NP_418388.1 PTS system fructose-like IIB component 2	PTS system, IIB component	PTS system fructose-like IIB component 2	PTS system fructose-like IIB component 2	PTS system fructose-like IIB component 2	Code: G; COG: COG1445 PTS system fructose-like IIB component 2	Code: G; COG: COG1445 PTS system fructose-like IIB component 2	Code: G; COG: COG1445 PTS system fructose-like IIB component 2	PTS system, fructose-like-2 IIB component 2	PTS system, IIB component precursor	PTS system fructose-like IIB component 2	PTS system, IIB component precursor	PTS system fructose-like IIB component 2 Code: G; COG: COG1445	PTS system, IIB component precursor	predicted enzyme IIB component of PTS	PTS system, fructose family, IIB component	Predicted enzyme IIB component of PTS	Putative PTS system, Fru family, IIB component	PTS system, fructose family, IIB component	PTS system, fructose-specific, IIB subunnit precursor	PTS system, fructose family, IIB component	Putative uncharacterized protein	Putative uncharacterized protein	Phosphotransferase system PTS fructose-specific IIB subunit precursor	PTS system, fructose family, IIB component	Putative PTS system, Fru family, IIB component	
ECOLI03815	UPF0141 membrane protein yijP	Putative membrane protein	Protein yijP	Integral membrane protein	Putative uncharacterized protein yijP	Residues 16 to 592 of 592 are 99 pct identical to residues 1 to 577 of a 577 aa protein from Escherichia coli K12 ref: NP_418390.1 orf, conserved hypothetical protein	putative Integral membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Membrane protein, putative	Phosphoethanolamine transferase cptA	identified by match to protein family HMM PF00884 sulfatase domain protein	Code: R; COG: COG2194 conserved hypothetical protein	Code: R; COG: COG2194 conserved hypothetical protein	Sulfatase	Code: R; COG: COG2194; orf conserved hypothetical protein	Protein YijP	sulfatase	Protein YijP	putative membrane-associated, metal-dependent hydrolase	putative transmembrane sulphatase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	conserved hypothetical protein Code: R; COG: COG2194	conserved hypothetical protein putative sulfatase	Sulfatase	Sulfatase precursor	Putative uncharacterized protein	Putative sulfatase	Putative uncharacterized protein	sulfatase PFAM: sulfatase KEGG: pen:PSEEN4076 transmembrane sulphatase	
ECOLI03816	Phosphoenolpyruvate carboxylase	phosphoenolpyruvate carboxylase, putative	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	putative phosphoenolpyruvate carboxylase	Ppc protein	Phosphoenolpyruvate carboxylase	phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	Phosphoenolpyruvate carboxylase	
ECOLI03817	Acetylornithine deacetylase	Peptidase M20 domain-containing protein C757.05c [Source:GeneDB_Spombe;Acc:SPCC757.05c]	Acetylornithine deacetylase	Putative uncharacterized protein PH1153	ArgE-like acetyl ornithine deacetylase	Acetylornithine deacetylase	Succinyl-diaminopimelate desuccinylase	Acetylornithine deacetylase	Acetylornithine deacetylase	Acetylornithine deacetylase	Carboxypeptidase G2	Acetylornithine deacetylase	Acetylornithine deacetylase	Acetylornithine deacetylase	Acetylornithine deacetylase	Acetylornithine deacetylase	Acetylornithine deacetylase	Acetylornithine deacetylase	Acetylornithine deacetylase	Acetylornithine deacetylase	Acetylornithine deacetylase/Succinyl- diaminopimelate desuccinylase and related deacylases	Acetylornithine deacetylase	Residues 14 to 396 of 396 are 98 pct identical to residues 1 to 383 of a 383 aa protein from Escherichia coli K12 ref: NP_418392.1 acetylornithine deacetylase	Acetylornithine deacetylase	ArgE/DapE-related deacylase	Acetylornithine deacetylase	Acetylornithine deacetylase	IPR001261: ArgE/dapE/ACY1/CPG2/yscS acetylornithine deacetylase	similar to Salmonella typhi CT18 acetylornithine deacetylase acetylornithine deacetylase	
ECOLI03818	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma- aminoadipyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase 1	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase	
ECOLI03819	Acetylglutamate kinase	Probable acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate/acetylaminoadipate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Probable acetylglutamate kinase	Probable acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate/acetylaminoadipate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	Acetylglutamate kinase	
ECOLI03820	Argininosuccinate lyase	argininosuccinate lyase;	Argininosuccinate lyase, catalyzes the final step in the arginine biosynthesis pathway.  [Source:SGD;Acc:S000001060]	highly similar to sp|P04076 Saccharomyces cerevisiae YHR018c ARG4 arginosuccinate lyase, hypothetical start	Argininosuccinate lyase	highly similar to sp|P04076 Saccharomyces cerevisiae YHR018c ARG4 arginosuccinate lyase singleton, start by similarity	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	highly similar to uniprot|P04076 Saccharomyces cerevisiae YHR018c ARLY;	Argininosuccinate lyase	DEHA2C13662p;highly similar to uniprot|P04076 Saccharomyces cerevisiae YHR018c ARG4;	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase related protein	Argininosuccinate lyase	Argininosuccinate lyase	hypothetical argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	Argininosuccinate lyase	
ECOLI03822	Soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	putative pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component	Soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	PMID: 9922271 best DB hits: BLAST: swissprot:P27306; STHA_ECOLI SOLUBLE PYRIDINE NUCLEOTIDE; E=1e-154 swissprot:Q9XBQ9; STHA_AZOVI SOLUBLE PYRIDINE NUCLEOTIDE; E=1e-149 swissprot:P50529; STHA_VIBCH SOLUBLE PYRIDINE NUCLEOTIDE; E=1e-146 COG: VC0151; COG1249 Dihydrolipoamide dehydrogenase/glutathione; E=1e-147 PFAM: PF00070; Pyridine nucleotide-disulphide; E=6.5e-63 PF02852; Pyridine nucleotide-disulphide; E=1.6e-34 soluble pyridine nucleotide transhydrogenase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE OXIDOREDUCTASE PROTEIN	Soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	Probable soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	Residues 1 to 466 of 466 are 99 pct identical to residues 1 to 466 of a 466 aa protein STHA_ECOLI sp: P27306 Soluble pyridine nucleotide transhydrogenase (STH) (NAD(P)(+) transhydrogenase [B-specific])	Soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	Putative uncharacterized protein	Pyridine nucleotide transhydrogenase protein	Probable soluble pyridine nucleotide transhydrogenase	Mb2732, sthA, len: 468 aa. Equivalent to Rv2713, len: 468 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 468 aa overlap). Probable sthA, soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1), highly similar to others e.g. Q983E2|MLR8366 from Rhizobium loti (Mesorhizobium loti) (481 aa), FASTA scores: opt: 1447, E(): 4.1e-78, (49.55% identity in 460 aa overlap); P27306|STHA_ECOLI|STH|UDHA|B3962 from Escherichia coli strain K12 (465 aa), FASTA scores: opt: 1267, E(): 1.7e-67, (43.05% identity in 462 aa overlap); O05139|STHA_PSEFL|STH from Pseudomonas fluorescens (463 aa), FASTA scores: opt: 1257, E(): 6.6e-67, (43.8% identity in 461 aa overlap); etc. Also highly similar to CAC46308|SMC00300 PUTATIVE OXIDOREDUCTASE PROTEIN from Rhizobium meliloti (Sinorhizobium meliloti) (467 aa), FASTA scores: opt: 1466, E(): 3e-79, (49.55% identity in 462 aa overlap). Shows some similarity to MTCY359.04, E(): 3.1e-08; MTCY210.05, E(): 3.4e-08. Contains ATP/GTP-binding site motif A (P-loop; PS00017). BELONGS TO THE PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASES CLASS-I.  COFACTOR: FAD (BY SIMILARITY). PROBABLE SOLUBLE PYRIDINE NUCLEOTIDE TRANSHYDROGENASE STHA (STH) (NAD(P)(+) TRANSHYDROGENASE [B-SPECIFIC]) (NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE)	IPR000103: Pyridine nucleotide-disulphide oxidoreductase, class-II; IPR000205: NAD-binding site; IPR000759: Adrenodoxin reductase;IPR000815: Mercuric reductase;IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I;IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase;IPR004099: Pyridine nucleotide-disulphide oxidoreductase dimerisation domain soluble pyridine nucleotide transhydrogenase	similar to Salmonella typhi CT18 possible pyridine nucleotide-disulphide oxidoreductase possible pyridine nucleotide-disulphide oxidoreductase	Soluble pyridine nucleotide transhydrogenase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme soluble pyridine nucleotide transhydrogenase (NAD(P)(+) transhydrogenase [B-specific])	soluble pyridine nucleotide transhydrogenase	Soluble pyridine nucleotide transhydrogenase	Similar to STHA_AZOVI (Q9XBQ9) Soluble pyridine nucleotide transhydrogenase from Azotobacter vinelandii (464 aa). FASTA: opt: 1596 Z-score: 1874.3 E(): 1.7e-96 Smith-Waterman score: 1596; 51.502 identity in 466 aa overlap. soluble pyridine nucleotide transhydrogenase	
ECOLI03821	Hydrogen peroxide-inducible genes activator	Oxidative stress transcriptional regulator	Hydrogen peroxide-inducible genes activator	Transcriptional regulator, LysR family	OxyR	Probable transcriptional regulator	Transcriptional regulator	Transcriptional regulatory protein, lysR family	Hydrogen peroxide-inducible regulon activator	Transcriptional regulator	Oxidative stress regulatory protein	putative Hydrogen peroxide-inducible genes activator	Redox-sensitive transcriptional activator	Hydrogen peroxide-inducible genes activator	Transcriptional regulator, LysR family	Probable LysR-family transcriptional regulator	Probable LysR-family transcriptional regulator	Hydrogen peroxide-inducible genes activator	Oxidative stress regulatory protein OxyR, putative	Probable LysR-family transcriptional regulator	Oxidative stress regulatory protein OxyR	Transcriptional regulator, LysR family	Hydrogen peroxide-inducible genes activator	Hydrogen peroxide-inducible genes activator	Transcriptional regulator	Residues 1 to 305 of 305 are 99 pct identical to residues 1 to 305 of a 305 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290598.1 activator, hydrogen peroxide-inducible genes	Oxidative stress transcriptional regulatory protein	Probable hydrogen peroxide-inducible genes activator transcription regulator protein	Hydrogen peroxide-inducible genes activator	
ECOLI03823	HTH-type transcriptional repressor fabR	Putative TetR-family transcriptional regulator	Putative uncharacterized protein	DesT	Transcriptional regulator	HTH-type transcriptional repressor fabR	putative transcriptional regulator, TetR family	Hypothetical protein yijC	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	TetR-family trancriptional regulator	Putative transcriptional regulator	Transcriptional regulator, TetR family	HTH-type transcriptional repressor fabR	SC2A11.17c, probable transcriptional regulator, len: 208 aa; similar to members of the tetR family e.g.  TCMR_STRGA tetracenomycin C transcriptional repressor (226 aa), fasta scores; opt: 138 z-score: 224.5 E(): 3e-05, 26.5% identity in 155 aa overlap. Contains helix-turn-helix motif at aa 36-57 (Score 1332, +3.72 SD) and Pfam match to entry PF00440 tetR, Bacterial regulatory proteins, tetR family, score 23.40, E-value 9.9e-05 putative transcriptional regulator	Transcriptional regulator	Residues 54 to 287 of 287 are 100 pct identical to residues 1 to 234 of a 234 aa protein from Escherichia coli O157:H7 ref: NP_312921.1 orf, conserved hypothetical protein	HTH-type transcriptional repressor fabR	Similar to TetR-family transcriptional regulatory protein YijC of Escherichia coli	Putative uncharacterized protein	putative transcriptional repressor (TetR/AcrR family)	similar to Salmonella typhi CT18 possible TetR-family trancriptional regulatory protein possible TetR-family trancriptional regulatory protein	HTH-type transcriptional repressor fabR	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative transcriptional regulator (TetR family)	transcriptional repressor of FabB	Similar to: HI0570, YIJC_HAEIN conserved hypothetical transcriptional regulator	Transcriptional regulator AcrR protein	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	
ECOLI03824	Inner membrane protein yijD	Putative membrane protein	hypothetical protein	Inner membrane protein yijD	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein VP2940	Inner membrane protein yijD	ATPase of the AAA+ class	Residues 1 to 119 of 119 are 99 pct identical to residues 1 to 119 of a 119 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290603.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to unknown protein YijD of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	Acetyl-coenzyme A synthetase	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein YijD	Putative membrane protein precursor	Putative uncharacterized protein yijD	Membrane protein precursor	ATPase of the AAA+ class	Putative membrane protein	Hypothetical protein	conserved hypothetical protein	
ECOLI03825	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	putative tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	Residues 1 to 366 of 366 are 99 pct identical to residues 1 to 366 of a 366 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290604.1 tRNA (uracil-5-)-methyltransferase	Uncharacterized RNA methyltransferase CT_742	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	identified by similarity to SP:P23003 tRNA (uracil-5-)-methyltransferase	IPR000051: SAM (and some other nucleotide) binding motif; IPR001566: tRNA (uracil-5-)-methyltransferase/TrmA tRNA (uracil-5-)-methyltransferase	similar to Salmonella typhi CT18 tRNA (uracil-5)-methyltransferase tRNA (uracil-5)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	tRNA (uracil-5-)-methyltransferase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme tRNA (uracil-5-)-methyltransferase	tRNA (Uracil-5-)-methyltransferase	
ECOLI03826	Vitamin B12 transporter btuB	Receptor, putative	Probable tonB-dependent receptor	Vitamin B12 transporter btuB precursor	Vitamin B12 transporter btuB	Putative outer membrane receptor protein	hypothetical outer membrane cobalamin receptor protein	Vitamin B12 transporter btuB precursor	identified by match to PFAM protein family HMM PF04052 iron compound TonB-dependent receptor, putative	Vitamin B12 transporter btuB	Putative outer membrane protein	Putative outer membrane protein	Putative uncharacterized protein	Vitamin B12 transporter btuB	Putative outer membrane protein	Vitamin B12 receptor BtuB, putative	METAL CHELATE OUTER MEMBRANE RECEPTOR	Vitamin B12 transporter btuB	Vitamin B12 transporter btuB	Vitamin B12 transporter btuB	Residues 16 to 629 of 629 are 99 pct identical to residues 1 to 614 of a 614 aa protein from Escherichia coli K12 ref: NP_418401.1 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23	Vitamin B12 transporter btuB	TonB-dependent receptor protein	Probable tonb-dependent receptor protein	Vitamin B12 transporter btuB	Probable outer membrane receptor protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark outer membrane receptor for transport of vitamin B	IPR000531: TonB-dependent receptor protein outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23	similar to Salmonella typhi CT18 vitamin B12 receptor protein vitamin B12 receptor protein	
ECOLI03827	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Putative glutamate racemase	Glutamate racemase	Putative Aspartate and glutamate racemases:Glutamate racemase	Putative aspartate and glutamate racemases:Glutamate racemase	Glutamate racemase	Glutamate racemase, putative	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Probable glutamate racemase	Glutamate racemase	Glutamate racemase	Glutamate racemase	Putative glutamate racemase	putative glutamate racemase	Glutamate racemase	




ECOLI03828	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	similar to GB:X05360, GB:Y00272, SP:P06493, PID:29839,  and PID:29841; identified by sequence similarity; putative UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase 2	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase 1	UDP-N-acetylenolpyruvoylglucosamine reductase 1	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase	
ECOLI03829	Bifunctional protein birA	Biotin operon repressor	Putative biotin ligase	Biotin--[acetyl-COA-carboxylase] synthetase	BirA biofunctional protein, putative	Bifunctional transcriptional repressor of the biotin operon/biotin acetyl-CoA-carboxylase synthetase	Biotin operon repressor/biotin-pyruvate carboxylase ligase	Biotin [acetyl-CoA-carboxylase] ligase	Bifunctional transcriptional repressor of the biotin operon/biotin acetyl-CoA-carboxylase synthetase	Biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase	Bifunctional protein birA	Biotin acetyl-CoA carboxylase ligase/biotin operon repressor	Putative biotin--(Acetyl-CoA carboxylase) synthetase	BirA bifunctional protein	Biotin [acetyl-CoA-carboxylase] ligase	Biotin-(Acetyl-coA carboxylase) ligase	Biotin-protein ligase	BirA bifunctional protein	Biotin protein ligase	Biotin-protein ligase	BirA	BirA bifunctional protein	Biotin-(Acetyl-CoA carboxylase) ligase	BirA bifunctional protein	Biotin operon repressor/biotin-[acetyl-CoA- carboxylase] synthetase	Bifunctional protein: biotin operon repressor and biotin-[acetyl-CoA carboxylase] synthetase	Biotin acetyl-CoA carboxylase ligase	Biotin operon repressor/biotin--[acetyl-CoA- carboxylase] ligase	Related to BirA bifunctional protein	
ECOLI03830	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	identified by match to TIGR protein family HMM TIGR00235 pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PANTOTHENATE KINASE PROTEIN	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	Pantothenate kinase	similar to AX064345-1|CAC25413.1| percent identity: 81 in 328 aa putative pantothenate kinase	pantothenate kinase (RTS PROTEIN)	Panthothenate kinase	

ECOLI03831	Elongation factor Tu	elongation factor Tu, mitochondrial precursor;	Mitochondrial translation elongation factor Tu; comprises both GTPase and guanine nucleotide exchange factor activities, while these activities are found in separate proteins in S. pombe and humans.  [Source:SGD;Acc:S000005713]	highly similar to sp|P02992 Saccharomyces cerevisiae YOR187w TUF1 translation elongation factor TU, mitochondrial, hypothetical start	Elongation factor Tu	Elongation factor Tu, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC9B6.04c]	highly similar to sp|P02992 Saccharomyces cerevisiae YOR187w TUF1 translation elongation factor TU, mitochondrial, start by similarity	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	elongation factor tu, putative	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	DEHA2D08954p;highly similar to uniprot|P02992 Saccharomyces cerevisiae YOR187W TUF1 Mitochondrial translation elongation factor Tu;	similar to GB:Y00978, GB:J03866, GB:X13822, SP:P10515, PID:30524, PID:35360,  and PID:619444; identified by sequence similarity; putative translation elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu 1	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu	Elongation factor Tu-B	
ECOLI03832	Preprotein translocase subunit secE	SecE	Preprotein translocase subunit secE	Preprotein translocase subunit SecE	Preprotein translocase subunit secE	putative preprotein translocase subunit SecE	Preprotein translocase subunit secE	Preprotein translocase subunit secE	Preprotein translocase, SecE subunit	Preprotein translocase SecE subunit	Preprotein translocase subunit secE	Preprotein translocase, SecE subunit	Preprotein translocase, SecE subunit	Preprotein translocase, SecE subunit	Preprotein translocase subunit secE	Protein translocase subunit	Preprotein translocase subunit secE	Preprotein translocase subunit SecE	Residues 1 to 127 of 127 are 96 pct identical to residues 1 to 127 of a 127 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290612.1 preprotein translocase	Preprotein translocase SecE subunit	SecE protein	Putative preprotein translocase (Sece subunit) transmembrane	Preprotein translocase SecE subunit	Preprotein translocase transmembrane,secE subunit	Preprotein translocase SecE subunit	IPR001901: Protein secE/sec61-gamma protein; IPR005807: SecE subunit of protein translocation complex preprotein translocase IISP family, membrane subunit	similar to Salmonella typhi CT18 preprotein translocase SecE subunit preprotein translocase SecE subunit	Preprotein translocase SecE subunit	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter preprotein translocase IISP family, membrane subunit	
ECOLI03833	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	identified by match to PFAM protein family HMM PF00467 transcription antitermination protein NusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	Transcription antitermination protein nusG	
ECOLI03834	50S ribosomal protein L11	hypothetical protein;similar to 60s ribosomal protein l19, mitochondrial precursor;	Mitochondrial ribosomal protein of the large subunit. [Source:SGD;Acc:S000005129]	similar to sp|P53875 Saccharomyces cerevisiae 60S ribosomal protein L19, mitochondrial precursor, hypothetical start	50S ribosomal protein L11	similar to sp|P53875 Saccharomyces cerevisiae YNL185c MRPL19 ribosomal protein of the large subunit, mitochondrial singleton, start by similarity	50S ribosomal protein L11	50S ribosomal protein L11P	50S ribosomal protein L11P	50S ribosomal protein L11	50S ribosomal protein L11P	50S ribosomal protein L11	ribosomal protein L11, putative	50S ribosomal protein L11P	50S ribosomal protein L11	50S ribosomal protein L11	50S ribosomal protein L11P	50S ribosomal protein L11	50S ribosomal protein L11	50S ribosomal protein L11	highly similar to uniprot|P53875 Saccharomyces cerevisiae YNL185c MRPL19;	50S ribosomal protein L11P	DEHA2F03740p;highly similar to uniprot|P53875 Saccharomyces cerevisiae YNL185c MRPL19 ribosomal protein of the large subunit;	50S ribosomal protein L11P	50S ribosomal protein L11P	50S ribosomal protein L11P	50S ribosomal protein L11P	50S ribosomal protein L11P	similar to GB:J03528, GB:Y00285, GB:S80785, GB:S80783, SP:P11717, PID:1006661, PID:1063394, PID:188672, PID:33055,  and PID:929647; identified by sequence similarity; putative ribosomal protein L11	
ECOLI03835	50S ribosomal protein L1	similar to tr|Q04599 Saccharomyces cerevisiae YDR116c, hypothetical start	50S ribosomal protein L1	60S ribosomal protein L1, mitochondrial [Source:GeneDB_Spombe;Acc:SPAC1610.02c]	50S ribosomal protein L1	50S ribosomal protein L1P	50S ribosomal protein L1P	50S ribosomal protein L1	50S ribosomal protein L1P	50S ribosomal protein L1	50S ribosomal protein L1P	50S ribosomal protein L1	50S ribosomal protein L1	50S ribosomal protein L1P	50S ribosomal protein L1	50S ribosomal protein L1	50S ribosomal protein L1	similar to uniprot|Q04599 Saccharomyces cerevisiae YDR116c;	50S ribosomal protein L1P	DEHA2B08294p;similar to uniprot|Q04599 Saccharomyces cerevisiae YDR116C MRPL1 Mitochondrial ribosomal protein of the large subunit;	50S ribosomal protein L1P	50S ribosomal protein L1P	50S ribosomal protein L1P	50S ribosomal protein L1P	similar to GB:X59964, SP:P28325, PID:30264,  and PID:398711; identified by sequence similarity; putative ribosomal protein L1	50S ribosomal protein L1	50S ribosomal protein L1	50S ribosomal protein L1	50S ribosomal protein L1	
ECOLI03836	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	50S ribosomal protein L10	
ECOLI03837	50S ribosomal protein L7/L12	conserved hypothetical protein;	highly similar to sp|P53163 Saccharomyces cerevisiae Putative 60S ribosomal protein L7/L12 homolog, mitochondrial, hypothetical start	50S ribosomal protein L7/L12	similar to sp|P53163 Saccharomyces cerevisiae YGL068w singleton, start by similarity	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	similar to uniprot|P53163 Saccharomyces cerevisiae YGL068w;	DEHA2F23738p;similar to uniprot|P53163 Saccharomyces cerevisiae YGL068W MNP1 Protein associated with the mitochondrial nucleoid;	identified by match to PFAM protein family HMM PF00542 ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	50S ribosomal protein L7/L12	
ECOLI03838	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase subunit beta	
ECOLI03839	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DEHA2A13618p;highly similar to uniprot|P04050 Saccharomyces cerevisiae YDL140C RPO21 RNA polymerase II largest subunit B220;	similar to GB:M21540, GB:X06676, GB:X06678, GB:X06679, GB:M20606, GB:M20607, GB:M20608, GB:M20609, GB:M20611, GB:M20612, GB:M20613, GB:M20614, SP:P19652, PID:1340138, PID:1340139, PID:177840, PID:24470, PID:24472,  and PID:388511; identified by sequence similarity; putative DNA-directed RNA polymerase, beta` subunit	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase subunit beta'	
ECOLI03840	Heat shock protein C	heat shock protein htrC	Hypothetical protein	Heat shock protein HtrC	Heat shock protein	Heat shock protein HtrC	Heat shock protein HtrC	Heat shock protein	Heat shock protein	Heat shock protein	Heat shock protein	HtrC protein	Heat shock protein	Heat shock protein	Heat shock protein	

ECOLI03841	Thiazole biosynthesis protein thiH	Thiamine biosynthesis protein ThiH	ThiH protein	Thiamin biosynthesis protein	Thiazole biosynthesis protein ThiH	Thiamine biosynthesis enzyme ThiH	Thiamine biosynthesis protein	Probable thiazole biosynthesis protein ThiH	Thiamine biosynthesis protein ThiH	putative ThiH protein	Thiazole biosynthesis protein thiH	ThiH protein	ThiH protein	ThiH protein	Thiazole biosynthesis protein	ThiH protein	ThiH protein	Thiamin biosynthesis, thiazole moiety	Thiamine biosynthesis enzyme, thiH	Thiamine biosynthesis enzyme ThiH	Residues 1 to 377 of 377 are 98 pct identical to residues 1 to 377 of a 377 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290621.1 thiamin biosynthesis, thiazole moiety	Thiamine biosynthesis protein ThiH	ThiH protein	Thiamin biosynthesis, thiazole moiety	identified by similarity to SP:P30140; match to protein family HMM PF04055 ThiH	deoxyxylulose-5-P + thi-S-COSH + tyrosine 4-methyl-5-(beta-hydroxyethyl)thiazole-P + 4-hydroxy-benzyl-alcohol + C1 of tyrosine	similar to Salmonella typhi CT18 thiamine biosynthesis protein thiamine biosynthesis protein	Thiamine biosynthesis protein ThiH	ThiH protein	
ECOLI03842	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole biosynthesis protein thiG	Thiazole synthase	Thiazole synthase	Thiazole biosynthesis protein thiG	Thiazole synthase	Thiazole synthase	Thiazole synthase	Thiazole synthase	
ECOLI03843	Protein thiS	Thiamin biosynthesis, probable sulfur donor	ThiS protein	Thiamine biosynthesis protein	ThiS protein	Thiamin biosynthesis, probable sulfur donor	ThiS protein	similar to Salmonella typhi CT18 thiamine biosynthesis protein thiamine biosynthesis protein	Thiamin biosynthesis ThiS	Putative uncharacterized protein	involved in thiamine biosynthesis; Code: H; COG: COG2104 Sulfur transfer protein	involved in thiamine biosynthesis; Code: H; COG: COG2104 Sulfur transfer protein	Code: H; COG: COG2104 Sulfur transfer protein involved in thiamine biosynthesis	ThiS protein	ThiS, thiamine-biosynthesis	Putative uncharacterized protein	thiamine biosynthesis protein ThiS identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683	ThiS, thiamine-biosynthesis	thiamine biosynthesis protein ThiS identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683	Thiamine biosynthesis protein	Sulfur transfer protein Code: H; COG: COG2104	ThiS, thiamine-biosynthesis	thiamine biosynthesis protein ThiS TIGRFAM: thiamine biosynthesis protein ThiS PFAM: thiamineS protein KEGG: plu:plu0483 thiS protein	Thiamine biosynthesis protein ThiS	Thiamine biosynthesis protein ThiS	Thiamine biosynthesis protein ThiS	Sulfur carrier protein ThiS	Putative uncharacterized protein	Thiamine biosynthesis protein ThiS	
ECOLI03844	Adenylyltransferase thiF	ThiF/moeB/hesA family protein	Thiamine biosynthesis protein related protein	Putative ATP-dependent adenyltransferase	hypothetical hesA protein	Molybdopterin biosynthesis MoeB protein	Thiamine biosynthesis protein ThiF	Thiamine biosynthesis protein	Molybdopterin biosynthesis protein	Putative molybdopterin biosynthesis MoeB protein	Adenylyltransferase thiF	ThiF protein	ThiF protein, putative	Thiamine biosynthesis adenylyltransferase	ThiF protein	ThiF protein	Thiamin biosynthesis, thiazole moiety	Molybdopterin biosynthesis	Dinucleotide-utilizing enzyme	Residues 6 to 256 of 256 are 98 pct identical to residues 1 to 251 of a 251 aa protein THIF_ECOLI sp: P30138 THIF PROTEIN	Thiamine biosynthesis protein ThiF	molybdenum cofactor biosynthesis protein MoeB	4-methyl-5-(Beta-hydroxyethyl)thiazole monophosphate synthesis protein	Molybdopterin biosynthesis protein MoeB	identified by match to protein family HMM PF00899; match to protein family HMM PF05237 thiamine biosynthesis protein ThiF	Molybdopterin biosynthesis MoeB protein	IPR000205: NAD-binding site; IPR000594: UBA/THIF-type NAD/FAD binding fold catalyzes the adenylation of thisS as part of thiazole synthesis, also with ThiI it catalyses the transfer of sulfur from cysteine to the ThiS enzyme	similar to Salmonella typhi CT18 thiamine biosynthesis protein thiamine biosynthesis protein	Thiamine biosynthesis protein ThiF	
ECOLI03845	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Putative thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	identified by match to PFAM protein family HMM PF02581 thiamine-phosphate pyrophosphorylase, putative	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Product confidence : putative Gene name confidence : putative putative thiamine-phosphate pyrophosphorylase protein	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Probable thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	THIAMIN-PHOSPHATE PYROPHOSPHORYLASE	Thiamine-phosphate pyrophosphorylase	thiamin phosphate pyrophosphorylase	Thiamin phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Thiamine phosphate pyrophosphorylase	Residues 2 to 212 of 212 are 99 pct identical to residues 1 to 211 of a 211 aa protein from Escherichia coli O157:H7 ref: NP_312943.1 thiamin biosynthesis protein ThiE	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	Thiamine-phosphate pyrophosphorylase	
ECOLI03846	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Thiamine biosynthesis protein thiC	Phosphomethylpyrimidine synthase	Phosphomethylpyrimidine synthase	Thiamine biosynthesis protein thiC	Phosphomethylpyrimidine synthase	Phosphomethylpyrimidine synthase	Phosphomethylpyrimidine synthase	Phosphomethylpyrimidine synthase	Phosphomethylpyrimidine synthase	putative thiamin biosynthesis protein ThiC	Thiamine biosynthesis protein thiC	
ECOLI03847	Regulator of sigma D	Regulator of sigma D	Regulator of sigma D	putative regulator of sigma D	Regulator of sigma D	Regulator of sigma D	Regulator of sigma D	Regulator of sigma D	Transcriptional regulator AlgQ	Regulator of sigma D	Regulator of sigma D	Regulator of sigma D	Residues 1 to 158 of 158 are 100 pct identical to residues 1 to 158 of a 158 aa protein from Escherichia coli O157:H7 ref: NP_312945.1 putative transcriptional regulator	Regulator of sigma D	regulator of sigma D, has binding activity to the major sigma subunit of RNAP	similar to Salmonella typhi Ty2 putative regulatory protein putative regulatory protein	Regulator of sigma D	transcriptional regulator	Transcriptional regulator PfrA	Regulator of sigma D	Regulator of sigma D	identified by similarity to SP:P15275; match to protein family HMM PF04353 alginate regulator AlgQ	identified by similarity to SP:P15275; match to protein family HMM PF04353 transcriptional regulator AlgQ	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ	Code: K; COG: COG3160 putative transcriptional regulator	Evidence 2b : Function of strongly homologous gene; PubMedId : 11591686, 12023304; Product type r : regulator stationary-phase regulator of sigma D, the major sigma subunit of RNA polymerase	Code: K; COG: COG3160 putative transcriptional regulator	regulator of sigma-D	Alginate regulatory protein AlgQ	
ECOLI03848	NADH pyrophosphatase	Phosphohydrolase	MutT/nudix family protein	NAD+ pyrophosphatase	NADH pyrophosphatase	NADH pyrophosphatase, MutT family hydrolase	NADH pyrophosphatase	NADH pyrophosphatase	MutT/nudix family protein	NADH pyrophosphatase	NADH pyrophosphatase	NADH pyrophosphatase	putative MutT/nudix family protein	NADH pyrophosphatase	NADH pyrophosphatase	NADH pyrophosphatase	NADH pyrophosphatase	NADH pyrophosphatase	NADH pyrophosphatase	NADH pyrophosphatase	NADH pyrophosphatase	Phosphohydrolase	Nudix (MutT) family hydrolase, C4-type Zn-finger domain containing	NADH pyrophosphatase	Residues 1 to 257 of 257 are 98 pct identical to residues 1 to 257 of a 257 aa protein from Escherichia coli K12 ref: NP_418424.1 orf, conserved hypothetical protein	NADH pyrophosphatase	NADH pyrophosphatase	NADH pyrophosphatase	IPR000086: NUDIX hydrolase putative NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding	
ECOLI03849	Uroporphyrinogen decarboxylase	uroporphyrinogen decarboxylase;	Uroporphyrinogen decarboxylase, catalyzes the fifth step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; a hem12 mutant has phenotypes similar to patients with porphyria cutanea tarda.  [Source:SGD;Acc:S000002454]	similar to sp|P32347 Saccharomyces cerevisiae Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD), start by similarity	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase [Source:GeneDB_Spombe;Acc:SPCC4B3.05c]	highly similar to sp|P32347 Saccharomyces cerevisiae YDR047w HEM12 uroporphyrinogen decarboxylase singleton, start by similarity	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	highly similar to uniprot|P32347 Saccharomyces cerevisiae YDR047w HEM12;	DEHA2F06402p;highly similar to uniprot|P32347 Saccharomyces cerevisiae YDR047W HEM12 Uroporphyrinogen decarboxylase catalyzes the fifth step in the heme biosynthetic pathway;	Uroporphyrinogen decarboxylase	similar to GB:X65867, GB:S60710, SP:P30566, PID:28904,  and PID:28905; identified by sequence similarity; putative uroporphyrinogen decarboxylase	Methylcobamide:CoM methyltransferase mtbA	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	Uroporphyrinogen decarboxylase	
ECOLI03850	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	endonuclease V	pseudo	endonuclease V	Endonuclease V	Endonuclease V	Endonuclease V	SC5F2A.09, possible endonuclease, len: 233aa; similar to SW:NFI_ECOLI endonuclease V from Escherichia coli (223 aa) fasta scores; opt: 468, z-score: 541.7, E(): 7.4e-23, (38.6% identity in 215 aa overlap). putative endonuclease	Residues 1 to 223 of 223 are 99 pct identical to residues 1 to 223 of a 223 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290630.1 endonuclease V (deoxyinosine 3'endoduclease)	Endonuclease V	Endonuclease V	Endonuclease V	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark endonuclease V	endonuclease V (deoxyinosine 3'endoduclease)	similar to Salmonella typhi CT18 putative endonuclease putative endonuclease	Endonuclease V	Endonuclease V	
ECOLI03851	Uncharacterized protein yjaG	Putative uncharacterized protein	Putative uncharacterized protein VV3147	Uncharacterized protein yjaG	conserved hypothetical protein	Hypothetical protein yjaG	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein VP2913	Putative uncharacterized protein yjaG	Uncharacterized protein conserved in bacteria	Residues 1 to 196 of 196 are 98 pct identical to residues 1 to 196 of a 196 aa protein from Escherichia coli K12 ref: NP_418427.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YjaG of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Similar to: HI0431, YJAG_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved protein	Uncharacterized protein yjaG	identified by similarity to SP:P32680 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3068 conserved hypothetical protein	Evidence 5 : No homology to any previously reported sequences putative orphan protein	Code: S; COG: COG3068 conserved hypothetical protein	conserved hypothetical protein	
ECOLI03852	DNA-binding protein HU-alpha	DNA-binding protein HU	DNA-binding protein HU	DNA-binding protein HU	DNA-binding protein HU	DNA-binding protein HU	DNA-binding protein HU-alpha	Bacterial nucleoid DNA-binding protein	DNA-binding protein HU-alpha	DNA-binding protein HU	DNA binding protein HU family	DNA-binding protein HU-alpha	putative DNA-binding protein HU-alpha	DNA-binding protein HU-alpha	DNA-binding protein HU	Bacterial nucleoid DNA-binding protein	DNA-binding protein HU-alpha	DNA-binding protein HU-alpha	DNA-binding protein HU	DNA-binding protein HU family	DNA binding protein HU	DNA-binding protein HU, form B	Bacterial nucleoid DNA-binding protein HU	DNA-binding protein HU-2	DNA-binding protein HU-alpha	Possible DNA-binding protein hu-alpha	DNA-binding protein HU	SCE59.09, hup, DNA-binding protein Hu (hs1), len: 93 aa; identical to SW:DBH_STRLI (EMBL:AB001381) Streptomyces lividans DNA-binding protein hu (HS1) Hup, 93 aa and highly similar to SW:DBH_BACSU (EMBL:X66448) Bacillus subtilis DNA-binding protein II (HB) (HU), 92 aa; fasta scores: opt: 237 z-score: 311.2 E(): 6.4e-10; 40.9% identity in 93 aa overlap. Contains Pfam match to entry PF00216 Bac_DNA_binding, Bacterial DNA-binding protein DNA-binding protein Hu (hs1)	Bacterial nucleoid DNA-binding protein	
ECOLI03853	Uncharacterized protein yjaH	Hypothetical protein yjaH	Putative lipoprotein	Putative uncharacterized protein yjaH	Residues 3 to 233 of 233 are 99 pct identical to residues 1 to 231 of a 231 aa protein from Escherichia coli O157:H7 ref: NP_312951.1 orf, conserved hypothetical protein	Putative exported protein	Similar to unknown protein YjaH of Escherichia coli	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative exported protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yjaH	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yjaH	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative lipoprotein	
ECOLI03854	Zinc resistance-associated protein	Zinc resistance-associated protein precursor	Zinc resistance-associated protein	Residues 1 to 188 of 188 are 100 pct identical to residues 1 to 188 of a 188 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290634.1 orf, conserved hypothetical protein	zinc-resistance associated protein	similar to Salmonella typhi CT18 possible exported protein possible exported protein	Zinc resistance-associated protein	Zinc resistance-associated protein	Code: UNTP; COG: COG3678 conserved hypothetical protein	Code: UNTP; COG: COG3678 conserved hypothetical protein	Code: UNTP; COG: COG3678; orf conserved hypothetical protein	Zinc resistance-associated protein YjaI	Hypothetical protein precursor	Periplasmic zinc resistance-associated protein	Hypothetical protein precursor	conserved hypothetical protein Code: UNTP; COG: COG3678	periplasmic zinc resistance-associated protein precursor ZraP	Zn-binding periplasmic protein	Putative uncharacterized protein	Zinc resistance-associated protein	Zn-binding periplasmic protein	Putative uncharacterized protein	Zinc resistance-associated protein	Putative uncharacterized protein precursor	Zinc resistance-associated protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein precursor	Zinc-resistance associated protein	
ECOLI03855	Sensor protein zraS	Sensor protein zraS	Sensor protein	Sensor protein	Sensor protein zraS	Residues 1 to 458 of 458 are 98 pct identical to residues 1 to 458 of a 458 aa protein from Escherichia coli O157:H7 ref: NP_312953.1 sensor kinase HydH	IPR004358: Bacterial sensor protein, C-terminal; IPR005467: Histidine kinase sensory kinase in two component regulatory system with HydG	similar to Salmonella typhi CT18 two-component system sensor protein two-component system sensor protein	Sensor protein	Sensor protein zraS	Code: T; COG: COG0642 sensor kinase for HydG, hydrogenase 3 activity	hydrogenase 3 activity; Code: T; COG: COG0642 sensor kinase for HydG	Code: T; COG: COG0642 sensor kinase for HydG hydrogenase 3 activity	Sensor protein	PAS	Sensor protein	signal transduction histidine kinase	multi-sensor signal transduction histidine kinase	PAS	Sensor protein	GAF sensor signal transduction histidine kinase	Signal transduction histidine kinase, nitrogen specific, NtrB precursor	sensor kinase for HydG Code: T; COG: COG0642	ZraS, sensory histidine kinase in two-component regulatory system with ZraR	Sensor protein	Sensor protein	Putative uncharacterized protein	Sensor protein	Integral membrane sensor signal transduction histidine kinase precursor	
ECOLI03857	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylglycinamide synthetase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylglycinamide synthetase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine-glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Putative phosphoribosylglycinamide synthetase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylglycinamide synthetase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	hypothetical phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase	
ECOLI03856	Transcriptional regulatory protein zraR	Transcriptional regulatory protein zraR	Two-component system response regulator	Transcriptional Regulatory protein zraR	Sigma-54-dependent transcriptional regulator	Transcriptional regulatory protein zraR	Residues 1 to 441 of 441 are 99 pct identical to residues 1 to 441 of a 441 aa protein from Escherichia coli K12 ref: NP_418432.1 response regulator of hydrogenase 3 activity (sensor HydH)	IPR001789: Response regulator receiver; IPR002078: Sigma-54 factor interaction domain; IPR002197: Helix-turn-helix, Fis-type response regulator in two-component reguatory system with HydH, regulates hydrogenase 3 activity (EBP family)	similar to Salmonella typhi CT18 transcriptional regulatory protein transcriptional regulatory protein	Transcriptional regulatory protein hydG	Sigma-54 dependent DNA-binding response regulator	sigma-54 dependent transcriptional activator; COG2204 polar flagellar protein	Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG or B4004 SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 9.3e-54, 40.81% id in 441 aa, and to Bacteroides thetaiotaomicron RteB, two-component system response regulator BT3801 SWALL:Q8A166 (EMBL:AE016942) (457 aa) fasta scores: E(): 1.4e-130, 82.89% id in 456 aa putative two-component response regulator transcriptional regulatory protein	Transcriptional regulatory protein zraR	DNA-binding response regulator, NtrC family	Code: T; COG: COG2204 response regulator of hydrogenase 3 activity (sensor HydH)	Transcriptional regulator	sensor HydH; Code: T; COG: COG2204 response regulator of hydrogenase 3 activity	sigma54 specific transcriptional regulator with PAS sensor, Fis family	sigma54 specific transcriptional regulator with PAS sensor, Fis family	Code: T; COG: COG2204 sensor HydH response regulator of hydrogenase 3 activity	Sigma54 specific transcriptional regulator, Fis family	transcriptional regulator, Fis family	Transcriptional regulatory protein ZraR	Sigma-54 factor, interaction region	Helix-turn-helix, Fis-type	Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	transcriptional regulatory protein(Sigma-54 interacting) identified by match to protein family HMM PF00158; match to protein family HMM PF00989	sigma54 specific transcriptional regulator, Fis family PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type SMART: AAA ATPase KEGG: bur:Bcep18194_C7716 sigma54 specific transcriptional regulator with PAS sensor, fis family	
ECOLI03858	Bifunctional purine biosynthesis protein purH	bifunctional purine biosynthesis protein ADE17;	highly similar to sp|P38009 Saccharomyces cerevisiae Bifunctional purine biosynthesis protein ADE17 [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase)	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein ade10 [Source:GeneDB_Spombe;Acc:SPCPB16A4.03c]	highly similar to sp|P38009 Saccharomyces cerevisiae YMR120c ADE17 5-aminoimidazole-4-carboxamide ribotide transformylase, start by similarity	Bifunctional purine biosynthesis protein purH	Formyltransferase phosphoribosylaminoimidazolecarboxamide	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein purH	Phosphoribosylaminoimidazolecarboxamide formyltransferase	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein purH	highly similar to uniprot|P38009 Saccharomyces cerevisiae YMR120c ADE17 or uniprot|P54113 Saccharomyces cerevisiae YLR028c ADE16;	DEHA2F14960p;highly similar to uniprot|P38009 Saccharomyces cerevisiae YMR120C ADE17 Enzyme of 'de novo' purine biosynthesis containing both 5-aminoimidazole-4- carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities;	Phosphoribosylaminoimidazole carboxamide formyl transferase/IMP cyclo-hydrolase	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein purH	Putative bifunctional purine biosynthesis protein	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein purH	PurH bifunctional enzyme related protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein purH	Bifunctional purine biosynthesis protein purH	




ECOLI03859	Uncharacterized protein yjaA	Putative uncharacterized protein	Putative membrane protein	Similar to unknown protein YjaA of Escherichia coli	Putative membrane protein	identified by similarity to SP:P09162 conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein yjaA	Membrane protein	conserved hypothetical protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjaA	Putative uncharacterized protein yjaA	Predicted protein	Conserved protein	hypothetical protein	Putative uncharacterized protein	
ECOLI03860	Uncharacterized N-acetyltransferase yjaB	Acetyltransferase, GNAT family	Acetyltransferase, GNAT family	Putative uncharacterized protein	Putative acetyltransferase	Lmo1126 protein	Hypothetical acetyltransferase yjaB	Acetyltransferase, GNAT family	Putative acetyltransferase	Putative uncharacterized protein	Putative acetyltransferase	Putative uncharacterized protein ECs4930	Lin1092 protein	Acetyltransferase	Putative uncharacterized protein yfhA	putative acetyltransferase	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	identified by similarity to OMNI:NTL01LI1082; match to protein family HMM PF00583 acetyltransferase, GNAT family	COG0454 putative acetyltransferase	Uncharacterized N-acetyltransferase yjaB	hypothetical protein, similar to acetyltransferase, GNAT family	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	Code: KR; COG: COG0454 conserved hypothetical protein	Putative N-acetyltransferase, GNAT family	Code: KR; COG: COG0454 conserved hypothetical protein	GCN5-related N-acetyltransferase	Acetyltransferase, GNAT family COG0454 [KR] Histone acetyltransferase HPA2 and related acetyltransferases	Code: KR; COG: COG0454; orf conserved hypothetical protein	GCN5-related N-acetyltransferase	
ECOLI03861	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Putative homoserine O-succinyltransferase	Putative homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	putative homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	identified by match to protein family HMM PF04204; match to protein family HMM TIGR01001 homoserine O-succinyltransferase	identified by match to TIGR protein family HMM TIGR01001 homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE HOMOSERINE O-SUCCINYLTRANSFERASE PROTEIN	Homoserine O-succinyltransferase	homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	Homoserine O-succinyltransferase	
ECOLI03862	Malate synthase A	malate synthase;	highly similar to sp|P30952 Saccharomyces cerevisiae YNL117w MLS1 malate synthase 1, start by similarity	Malate synthase	highly similar to uniprot|P30952 Saccharomyces cerevisiae YNL117w MLS1 malate synthase or uniprot|P21826 Saccharomyces cerevisiae YIR031c DAL7;	DEHA2E13530p;similar to uniprot|P30952 Saccharomyces cerevisiae YNL117W MLS1 Malate synthase enzyme of the glyoxylate cycle involved in utilization of non-fermentable carbon sources and highly similar to ca|CA4748|CaMLS1 Candida albicans CaMLS1 malate synthase;	Malate synthase	Malate synthase	Malate synthase	Malate synthase	Malate synthase	Malate synthase	Malate synthase	Malate synthase	Malate synthase	putative malate synthase A	Malate synthase A	identified by match to protein family HMM PF01274; match to protein family HMM TIGR01344 malate synthase A	Malate synthase	go_component: cytoplasm [goid 0005737]; go_component: peroxisomal matrix [goid 0005782]; go_function: malate synthase activity [goid 0004474]; go_process: glyoxylate cycle [goid 0006097] malate synthase, putative	Malate synthase	Malate synthase	Malate synthase	Malate synthase A	Malate synthase	Malate synthase	CDS_ID OB2405 malate synthase	SCAH10.08c, aceB1, malate synthase, len: 540 aa; highly similar to SW:MASY_STAE (EMBL:U63518) Streptomyces arenae, malate synthase (EC 4.1.3.2) AceB, 543 aa; fasta scores: opt: 2625 z-score: 3156.2 E(): 0; 78.2% identity in 551 aa overlap. Contains match to Pfam entry PF01274 Malate_synthase, Malate synthase and to Prosite entry PS00510 Malate synthase signature malate synthase	Malate synthase	
ECOLI00309	Putative uncharacterized protein yahH	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	YahH protein	Putative uncharacterized protein	
ECOLI03863	Isocitrate lyase	2-methylisocitrate lyase of the mitochondrial matrix, functions in the methylcitrate cycle to catalyze the conversion of 2-methylisocitrate to succinate and pyruvate; ICL2 transcription is repressed by glucose and induced by ethanol. [Source:SGD;Acc:S000006210]	similar to sp|Q12031 Saccharomyces cerevisiae YPR006c ICL2 non-functional isocitrate lyase, hypothetical start	Isocitrate lyase	Mitochondrial 2-methylisocitrate lyase [Source:GeneDB_Spombe;Acc:SPBC1683.11c]	similar to sp|Q12031 Saccharomyces cerevisiae YPR006c ICL2 non-functional isocitrate lyase, start by similarity	Isocitrate lyase	Isocitrate lyase	similar to uniprot|Q12031 Saccharomyces cerevisiae YPR006c ICL2 non-functional isocitrate lyase;	Putative isocitrate lyase	Isocitrate lyase	Isocitrate lyase	Isocitrate lyase	Isocitrate lyase	Isocitrate lyase	Isocitrate lyase	Isocitrate lyase	Isocitrate lyase	pseudo	Isocitrate lyase	Isocitrate lyase	Isocitrate lyase	putative isocitrate lyase	Isocitrate lyase	identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346 isocitrate lyase	similar to GB:J04501, GB:Z33622, GB:Z33623, GB:Z33609, GB:Z33624, GB:Z33625, GB:Z33626, GB:Z33610, GB:Z33627, GB:Z33628, GB:Z33629, GB:Z33630, GB:Z33631, GB:Z33633, GB:U32573, SP:P13807, PID:1125701, PID:183355, and PID:825669; identified by sequence similarity; putative isocitrate lyase	Isocitrate lyase	Putative isocitrate lyase	Putative isocitrate lyase	
ECOLI03865	Ankyrin repeat protein A	SenA; probably secreted by the Mxi-Spa secretion machinery OspD3	SenA; probably secreted by the Mxi-Spa secretion machinery OspD3	Ankyrin-repeat protein A	Regulator of acetyl CoA synthetase	ShET2 enterotoxin domain protein	OspD3	ShET2 enterotoxin, N-region family	Regulator of acetyl CoA synthetase	Non-LEE-encoded type III secreted effector	OspD3	Ankyrin repeat protein	
ECOLI03864	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	hypothetical isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	pseudo	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	similar to Escherichia coli K12 isocitrate dehydrogenase kinase-phosphatase gi: 1790446 (579 aa).  BLAST with identity of 98% in 579 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	IPR000515: Binding-protein-dependent transport systems inner membrane component isocitrate dehydrogenase kinase/phosphatase, also has ATPase activity	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase	Isocitrate dehydrogenase kinase/phosphatase (EC 2.7.1.116) (EC 3.1.3.-) (IDH kinase/phosphatase) (IDHK/P	isocitrate dehydrogenase kinase/phosphatase	identified by similarity to SP:P11071; match to protein family HMM PF06315 isocitrate dehydrogenase kinase/phosphatase	identified by similarity to SP:P11071; match to protein family HMM PF06315 isocitrate dehydrogenase kinase/phosphatase	(Isocitrate dehydrogenase (NADP+)) kinase	Isocitrate dehydrogenase kinasephosphatase	
ECOLI03866	Acetate operon repressor	Putative uncharacterized protein	Transcriptional regulator, IclR family	Acetate operon repressor	Acetate operon repressor	transcription regulator	Acetate operon repressor	Repressor of aceBA operon	transcription regulator	SCAH10.11c, iclR, transcriptional regulator for glyoxylate bypass, len: 270 aa; highly similar to SW:ICLR_ECOLI (EMBL:M31761) Escherichia coli acetate operon repressor IclR, 274 aa; fasta scores: opt: 538 Z-score: 603.9 E(): 5.5e-26; 40.234% identity in 256 aa overlap and to SW:GYLR_STRCO (EMBL:X14188) Streptomyces coelicolor glycerol operon regulatory protein, 254 aa; fasta scores: opt: 333 z-score: 389.8 E(): 2.4e-14; 32.8% identity in 250 aa overlap. Contains match to Pfam entry PF01614 IclR, Bacterial transcriptional regulator and a possible helix-turn-helix motif at residues 39..60 (+2.51 SD) transcriptional regulator for glyoxylate bypass	Residues 1 to 231 of 231 are 99 pct identical to residues 44 to 274 of a 274 aa protein ICLR_ECOLI sp: P16528 ACETATE OPERON REPRESSOR	Acetate operon repressor	transcriptional regulator, IclR family	Transcriptional regulator	IPR005473: Bacterial transcription regulator, ICLR-like family acetate operon transcriptional repressor (IclR family)	similar to Salmonella typhi CT18 acetate operon repressor acetate operon repressor	Repressor of aceBA operon	Acetate operon repressor	regulatory proteins, IclR	Code: K; COG: COG1414 repressor of aceBA operon	Code: K; COG: COG1414 repressor of aceBA operon	transcriptional regulator, IclR family	Code: K; COG: COG1414 repressor of aceBA operon	transcriptional regulator, IclR family	transcriptional regulator, IclR family PFAM: regulatory proteins, IclR: (6.2e-41) KEGG: jan:Jann_3261 transcriptional regulator, IclR family, ev=1e-102, 68% identity	Repressor of aceBA operon	Repressor of aceBA operon	AceBAK operon repressor	acetate operon repressor, putative	
ECOLI03867	Methionine synthase	5-methyltetrahydrofolate-homocysteine methyltransferase	5-methyltetrahydrofolate-homocysteine methyltransferase	5-methyltetrahydrofolate--homocysteine methyltransferase	5-methyltetrahydrofolate--homocysteine methyltransferase	Methionine synthase	5-methyltetrahydrofolate S-homocysteine methyltransferase	Methionine synthase	5-methyltetrahydrofolate--homocysteine methyltransferase	B12-dependent homocysteine-N5- methyltetrahydrofolate transmethylase	Methionine synthase	B12-dependent homocysteine-N5- methyltetrahydrofolate transmethylase	5-methyltetrahydrofolate--homocysteine methyltransferase	5-methyltetrahydrofolate-homocysteine methyltransferase	5-methyltetrahydrofolate--homocysteine methyltransferase	5-methyltetrahydrofolate--homocysteine methyltransferase	Putative 5-methyltetrahydrofolate--homocysteine methyltransferase	putative cobalamin-dependent methionine synthase	5-methyltetrahydrofolate--homocysteine methyltransferase	identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607; match to protein family HMM PF02965 5-methyltetrahydrofolate--homocysteine methyltransferase	similar to GP:15076006, and SP:P13009; identified by sequence similarity; putative 5-methyltetrahydrofolate--homocysteine methyltransferase	Methionine synthase	5-methyltetrahydrofolate--homocysteine methyltransferase	5-methyltetrahydrofolate--homocysteine methyltransferase	5-methyltetrahydrofolate--homocysteine methyltransferase	5-methyltetrahydrofolate--homocysteine methyltransferase	PMID: 2185137 PMID: 2668277 best DB hits: BLAST: swissprot:P13009; METH_ECOLI 5-METHYLTETRAHYDROFOLATE--HOMOCYSTEINE; E=0.0 gb:AAC43113.1; (U00006) B12-dependent; E=0.0 embl:CAA34601.1; (X16584) 5-methyltetrahydrofolate- homocysteine; E=0.0 COG: VC0390_2; COG1410 Methionine synthase I, cobalamin-binding domain; E=0.0 VC0390_1; COG0646 Methionine synthase I (cobalamin-dependent),; E=1e-79 TM0268_2; COG1410 Methionine synthase I, cobalamin-binding domain; E=5e-36 PFAM: PF02574; Homocysteine S-methyltransfer; E=5.5e-102 PF02607; B12 binding domain; E=1.3e-38 PF02310; B12 binding domain; E=6.3e-51 5-methyltetrahydrofolate--homocysteine methyltransferase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE 5-METHYLTETRAHYDROFOLATE--HOMOCYSTEINE METHYLTRANSFERASE (METHIONINE SYNTHASE, VITAMIN-B12 DEPENDENT ISOZYME) PROTEIN	5-methyltetrahydrofolate--homocysteine methyltransferase	
ECOLI03868	Uncharacterized protein yjbB	Na/Pi-cotransporter family protein	Putative Na+-dependent phosphate transporter	Transporter, putative	Na+/Pi-cotransporter related protein	Putative uncharacterized protein CPE2368	Putative uncharacterized protein	Putative uncharacterized protein VVA0097	Putative membrane protein	Na/Pi-cotransporter family protein	Lmo0826 protein	Sodium-dependent phosphate transporter	Sodium-dependent phosphate transporter	Na/Pi-cotransporter family protein	Hypothetical protein yjbB	Na/Pi cotransporter II-related protein	identified by match to protein family HMM PF01895; match to protein family HMM PF02690; match to protein family HMM TIGR00704 Na/Pi-cotransporter family protein	identified by match to PFAM protein family HMM PF03772 Na/Pi-cotransporter family protein	Putative sodium/phosphate cotransporter	best DB hits: BLAST: ddbj:BAB05126.1; (AP001511) BH1407~unknown conserved protein; E=2e-60 pir:H71283; conserved hypothetical integral membrane protein TP0771; E=1e-47 embl:CAC27413.1; (AJ307315) putative membrane protein; E=4e-47 COG: BH1407; COG1283 Na+/phosphate symporter; E=2e-61 PFAM: PF02690; Na+/Pi-cotransporter; E=1.4e-26 conserved hypothetical protein-putative Na/phosphate symporter	Sodium-dependent phosphate transport protein	Na/Pi cotransporter family protein	Putative Na/Pi cotransporter II-related protein	Uncharacterized protein yjbB	CDS_ID OB1933 hypothetical protein	Putative uncharacterized protein MYPU_3410	hypothetical protein	Na/Pi cotransporter family protein	BH1407 protein	
ECOLI03869	Peptidase E	Peptidase E	Peptidase E	Uncharacterized peptidase Lmo0363	hypothetical peptidase E	Peptidase E	Peptidase E	SC5G5.07, probable peptidase, len: 243 aa; similar to SW:PEPE_SALTY (EMBL:U01246) Salmonella typhimurium peptidase E (EC 3.4.*.*) (alpha-aspartyl dipeptidase) PepE, 229 aa; fasta scores: opt: 612 Z-score: 688.6 bits: 134.8 E(): 9.2e-31; 43.612% identity in 227 aa overlap putative peptidase	Residues 1 to 229 of 229 are 99 pct identical to residues 1 to 229 of a 229 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290648.1 peptidase E, a dipeptidase where amino-terminal residue is aspartate	(alpha)-aspartyl dipeptidase	similar to Salmonella typhi CT18 peptidase E peptidase E	identified by match to protein family HMM PF03575 peptidase, S51 family	peptidase E	Peptidase E	Code: E; COG: COG3340 peptidase E, a dipeptidase where amino-terminal residue is aspartate	a dipeptidase where amino-terminal residue is aspartate; Code: E; COG: COG3340 peptidase E	peptidase E	Peptidase E	Peptidase E	peptidase E	Dipeptidase E PFAM: peptidase S51, dipeptidase E KEGG: stm:STM4190 (alpha)-aspartyl dipeptidase	Dipeptidase E	dipeptidase E identified by similarity to SP:P36936; match to protein family HMM PF03575	Peptidase E	peptidase E Code: E; COG: COG3340	Peptidase E	peptidase E	Putative peptidase	Dipeptidase E	
ECOLI03870	Ribosomal large subunit pseudouridine synthase F	Pseudouridine synthase	Pseudouridine synthase	Putative uncharacterized protein	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase F	Pseudouridine synthase	Related to pseudouridine synthase	Pseudouridine synthase	Pseudouridine synthase	putative 16S rRNA uridine-516 pseudouridylate synthase	Ribosomal large subunit pseudouridine synthase F	identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093 RNA pseudouridylate synthase family protein	Pseudouridine synthase	Pseudouridine synthase	Ribosomal large subunit pseudouridine synthase F	Pseudouridine synthase	Residues 1 to 290 of 290 are 99 pct identical to residues 1 to 290 of a 290 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290656.1 orf, conserved hypothetical protein	Probable pseudouridylate synthase	IPR000748: Pseudouridine synthase, Rsu; IPR002942: RNA-binding S4 putative pseudouridine synthase	similar to Salmonella typhi CT18 putative pseudouridine synthase putative pseudouridine synthase	Pseudouridine synthase	ribosomal large subunit pseudouridine synthase F	Ribosomal large subunit pseudouridine synthase F	pseudouridylate synthase	tRNA pseudouridine synthase A	Pseudouridine synthase	Code: J; COG: COG1187 conserved hypothetical protein	Code: J; COG: COG1187 conserved hypothetical protein	
ECOLI03871	Uncharacterized protein yjbD	Hypothetical protein yjbD	Putative uncharacterized protein	Putative uncharacterized protein yjbD	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein yjbD	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	conserved hypothetical protein	Putative cytoplasmic protein	Putative uncharacterized protein yjbD	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03872	Lysine-sensitive aspartokinase 3	aspartokinase;	Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis. [Source:SGD;Acc:S000000854]	similar to sp|P10869 Saccharomyces cerevisiae YER052c HOM3 L-aspartate 4-P-transferase singleton, hypothetical start	Probable aspartokinase [Source:GeneDB_Spombe;Acc:SPBC19F5.04]	Aspartokinase	Aspartokinase	Aspartate kinase	highly similar to uniprot|P10869 Saccharomyces cerevisiae YER052c HOM3;	Aspartokinase II alpha subunit	DEHA2C07282p;similar to uniprot|P10869 Saccharomyces cerevisiae YER052c HOM3 Aspartate kinase;	Aspartokinase	Aspartokinase	similar to GB:L13923, GB:X63556, GB:L19896, SP:P35555, PID:1335064,  and PID:306746; identified by sequence similarity; putative aspartokinase III	Aspartokinase	Aspartokinase	hypothetical aspartokinase	Aspartokinase	Aspartokinase	Aspartokinase	Aspartokinase	Aspartokinase	Aspartokinase	Aspartokinase	Aspartokinase	putative aspartokinase III, lysine-sensitive	Aspartokinase	Aspartokinase	identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM TIGR00657 aspartate kinase, monofunctional class	
ECOLI03873	Glucose-6-phosphate isomerase	Glycolytic enzyme phosphoglucose isomerase, catalyzes the interconversion of glucose-6-phosphate and fructose-6-phosphate; required for cell cycle progression and completion of the gluconeogenic events of sporulation.  [Source:SGD;Acc:S000000400]	highly similar to sp|P12709 Saccharomyces cerevisiae YBR196c PGI1 glucose-6-phosphate isomerase, start by similarity	Glucose-6-phosphate isomerase [Source:GeneDB_Spombe;Acc:SPBC1604.05]	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	identified by match to TIGR protein family HMM TIGR01825 glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Probable glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase 1	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	putative Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase	
ECOLI03874	Uncharacterized protein yjbE	Hypothetical protein yjbE precursor	Uncharacterized protein yjbE	Residues 1 to 80 of 80 are 98 pct identical to residues 1 to 80 of a 80 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290660.1 orf, conserved hypothetical protein	putative outer membrane protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative outer membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative membrane protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03875	Uncharacterized lipoprotein yjbF	Putative lipoprotein	Hypothetical lipoprotein yjbF	Putative uncharacterized protein yjbF	Residues 1 to 222 of 222 are 98 pct identical to residues 1 to 222 of a 222 aa protein from Escherichia coli K12 ref: NP_418451.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Putative outer membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical lipoprotein YjbF	Putative uncharacterized protein	conserved hypothetical protein	conserved hypothetical protein	Lipoprotein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Predicted lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03876	Uncharacterized protein yjbG	Hypothetical protein yjbG	Putative uncharacterized protein yjbG	Residues 1 to 245 of 245 are 98 pct identical to residues 1 to 245 of a 245 aa protein from Escherichia coli K12 ref: NP_418452.1 orf, conserved hypothetical protein	putative periplasmic protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative periplasmic protein	conserved hypothetical protein	conserved hypothetical protein	hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjbG	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03877	Uncharacterized lipoprotein yjbH	Putative lipoprotein	conserved hypothetical protein	Hypothetical lipoprotein yjbH	Putative uncharacterized protein yjbH	Residues 1 to 698 of 698 are 99 pct identical to residues 1 to 698 of a 698 aa protein from Escherichia coli K12 ref: NP_418453.1 orf, conserved hypothetical protein	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Fusion of WbfC-and WbfB-like uncharacterized domains involved in polysaccharide synthesis	Putative outer membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	Hypothetical lipoprotein YjbH	Putative uncharacterized protein yjbH	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative lipoprotein	Predicted porin	Putative lipoprotein	Putative uncharacterized protein precursor	Putative lipoprotein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative lipoprotein	Fusion of WbfC-and WbfB-like uncharacterized	Putative uncharacterized protein yjbH	
ECOLI03878	Uncharacterized protein yjbT	conserved hypothetical protein	Uncharacterized protein yjbT	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjbT	Putative uncharacterized protein	
ECOLI03879	Protein psiE	Protein psiE	Protein psiE homolog	Protein psiE homolog	Protein psiE homolog	Protein psiE homolog	Protein psiE	membrane protein, putative	Protein psiE homolog	Protein psiE	Protein psiE homolog	Residues 1 to 136 of 136 are 100 pct identical to residues 1 to 136 of a 136 aa protein from Escherichia coli K12 ref: NP_418454.1 orf, conserved hypothetical protein	Protein psiE homolog	Putative uncharacterized protein yogI	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Protein psiE homolog	identified by match to protein family HMM PF06146 peptidyl-tRNA hydrolase, putative	PsiE	Protein psiE	phosphate starvation inducible protein (psiE protein)	Code: S; COG: COG3223 conserved hypothetical protein	Code: S; COG: COG3223 conserved hypothetical protein	Hypothetical membrane spanning protein COG0344 [S] Predicted membrane protein	Code: S; COG: COG3223; orf conserved hypothetical protein	Protein psiE	Putative membrane protein	Protein psiE	Predicted membrane protein	
ECOLI03880	D-xylose-proton symporter	MFS transporter	D-xylose-proton symporter	Putative L-arabinose permease	Major facilitator family transporter	D-xylose-proton symporter	hyopthetical permease	identified by match to protein family HMM PF00083; match to protein family HMM TIGR00879 xylose permease	D-xylose-proton symporter	Sugar transporter	SC7A1.22, sugar transporter, len: aa; similar to many eg. SW:GLCP_SYNY3 glucose transport protein from Synechocystis sp. (468 aa) fasta scores; opt: 1477, z-score: 1527.5, E(): 0, (50.6% identity in 468 aa overlap). Contains PS00217 Sugar transport proteins signature 2, PS00216 Sugar transport proteins signature 1 and Pfam match to entry PF00083 sugar_tr, Sugar (and other) transporter, score 404.10, E-value 1.3e-117. Also contains several possible transmembrane regions. putative sugar transporter	Residues 1 to 491 of 491 are 98 pct identical to residues 1 to 491 of a 491 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290665.1 xylose-proton symport	COG0477 glucose facilitated diffusion protein	Similar to Escherichia coli, and Escherichia coli O157:H7 D-xylose-proton symporter XylE or B4031 or Z5629 or ECS5014 SWALL:XYLE_ECOLI (SWALL:P09098) (491 aa) fasta scores: E(): 1.5e-72, 49.69% id in 489 aa, and to Bacteroides thetaiotaomicron D-xylose-proton symporter BT0794 SWALL:AAO75901 (EMBL:AE016929) (484 aa) fasta scores: E(): 2.5e-179, 91.66% id in 480 aa putative sugar-transport membrane protein	Permeases of the major facilitator superfamily ProP protein	Sugar (And other) transporter	MFS transporter	sugar transporter	Code: GEPR; COG: COG0477 xylose-proton symport	Sugar transporter	Unnamed protein product; glcP gene product	Sugar transporter	Sugar transporter precursor	Hypothetical protein	sugar transporter TIGRFAM: sugar transporter PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: lxx:Lxx14750 sugar transporter	sugar transporter TIGRFAM: sugar transporter PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: mmc:Mmcs_3147 sugar transporter	sugar transporter TIGRFAM: sugar transporter PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: mmc:Mmcs_3147 sugar transporter	Arabinose-proton symporter	Sugar transporter, MFS superfamily protein	
ECOLI03881	Maltose transport system permease protein malG	Maltose transport system permease protein malG	Maltose transport system permease protein malG	putative ABC-type maltose transport system,permease component	Maltose transport system permease protein malG	Maltose transport system permease protein malG	Maltose transport system permease protein malG	Maltose transport system permease protein malG	Maltose transport system permease protein malG	Residues 1 to 296 of 296 are 100 pct identical to residues 1 to 296 of a 296 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290666.1 part of maltose permease, inner membrane	Maltose transport system permease protein malG	Maltose transport system permease protein malG	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), maltose transport protein	similar to Salmonella typhi CT18 maltose transport inner membrane protein maltose transport inner membrane protein	ABC maltose transporter, permease subunit malG	transporter	Sugar permeases MalG protein	Maltose transport system permease protein malG	Code: G; COG: COG3833 part of maltose permease, inner membrane	ABC-type maltose transport system, permease component COG3833	Maltose transport system permease protein MalG	Maltose transport system permease protein MalG	Maltose transport system permease protein MalG	Maltose transport system permease protein MalG	maltose transport system permease protein MalG identified by match to protein family HMM PF00528	Maltose transport system permease protein MalG precursor	ABC-type maltose transporter, permease component	part of maltose permease, inner membrane Code: G; COG: COG3833	Maltose transport system permease protein MalG	
ECOLI03882	Maltose transport system permease protein malF	Maltose transport system permease protein malF	Maltose transport system permease protein malF	Maltose transport system permease protein malF	Maltose transport system permease protein malF	Maltose transport system permease protein malF	similar to AJ414158-108|CAC93183.1| percent identity: 32 in 493 aa putative maltose ABC transporter permease protein	Maltose transport system permease protein malF	Residues 6 to 519 of 519 are 99 pct identical to residues 1 to 514 of a 514 aa protein from Escherichia coli K12 ref: NP_418457.1 part of maltose permease, periplasmic	Maltose transport system permease protein malF	Maltose transport system permease protein malF	IPR000515: Binding-protein-dependent transport systems inner membrane component ABC superfamily (membrane), maltose transport protein	similar to Salmonella typhi CT18 maltose transport inner membrane protein maltose transport inner membrane protein	ABC maltose/maltodextrin transporter, permease subunit malF	maltose transport system permease protein MalF	ABC-type sugar transport systems, permease components MalF protein	Maltose transport system permease protein malF	Code: G; COG: COG1175 part of maltose permease, periplasmic	Maltose transport system permease protein MalF	Maltose transport system permease protein MalF	Maltose transport system permease protein MalF	Maltose transport system permease protein MalF	maltose transport system permease protein MalF identified by match to protein family HMM PF00528	ABC-type maltose transporter, permease protein	Maltose ABC transporter, permease protein	Hypothetical protein	part of maltose permease, periplasmic Code: G; COG: COG1175	Maltose transport system permease protein MalF	maltose transport system permease protein MalF	
ECOLI03883	Maltose-binding periplasmic protein	Maltotriose-binding protein precursor	Probable maltose ABC transporter	Maltose-binding periplasmic protein	Maltose ABC transporter, periplasmic maltose- binding protein	Maltose/maltodextrin-binding protein	Periplasmic maltose-binding protein	putative maltose-binding periplasmic proteins/domains	Maltose-binding periplasmic protein	maltose ABC transporter maltose-binding protein	Maltose ABC transporter, periplasmic maltose- binding protein	Product confidence : putative Gene name confidence : hypothetical putative sugar uptake ABC transporter periplasmic solute-binding protein precursor	Putative periplasmic maltose-binding protein	Maltose ABC transporter, periplasmic maltose- binding protein	Maltose-binding periplasmic protein	similar to AB047926-3|BAB40635.1| percent identity: 28 in 412 aa putative maltose ABC transporter periplasmic maltose-binding protein	SCF85.18, probable solute-binding protein, len: 436 aa. Similar to many including: Streptomyces lividans TR:Q9Z492 (EMBL; AF043654) BxlE precursor (434 aa), fasta scores opt: 946 z-score: 1058.6 E(): 0 33.7% identity in 427 aa overlap and Streptococcus mutans SW:MSME_STRMU (EMBL; M77351) multiple sugar-binding protein precursor MsmE (420 aa), fasta scores opt: 258 z-score: 291.6 E(): 6.9e-09 24.2% identity in 351 aa overlap. Contains a Pfam match to entry PF01547 SBP_bacterial_1, PS00013 Prokaryotic membrane lipoprotein lipid attachment site and a PS00017 ATP/GTP-binding site motif A (P-loop). Also contains a possible N-terminal signal sequence. probable solute-binding protein	Maltose-binding periplasmic proteins/domains	Maltose-binding periplasmic protein	Residues 1 to 396 of 396 are 99 pct identical to residues 1 to 396 of a 396 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290668.1 periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis	Maltose-binding periplasmic protein	Periplasmic maltose-binding protein	Maltose ABC transporter, periplasmic maltose- binding protein	IPR006060: Maltose binding protein; IPR006061: Bacterial extracellular solute-binding protein, family 1 domain ABC superfamily (bind_prot) maltose transport protein, substrate recognition for transport and chemotaxis	similar to Salmonella typhi CT18 periplasmic maltose-binding protein periplasmic maltose-binding protein	ABC transporter, periplasmic maltose-binding protein malE	sugar-binding periplasmic protein	maltose/maltodextrin-binding protein	Maltose-binding periplasmic proteins/domains MalE protein	
ECOLI03884	Maltose/maltodextrin import ATP-binding protein malK	Maltose/maltodextrin import ATP-binding protein malK	Putative sugar ABC transporter protein	putative MalK, ABC-type sugar transport systems	Maltose/maltodextrin import ATP-binding protein malK	Maltose/maltodextrin import ATP-binding protein malK	ABC transport protein, ATP-binding component	ABC transport protein, ATP-binding component	Maltose/maltodextrin ABC transporter, ATP-binding protein	ABC transport protein, ATP-binding component	Maltose/mannitol ABC transporter, ATP-binding protein, putative	Maltose/maltodextrin import ATP-binding protein malK	Residues 31 to 401 of 401 are 99 pct identical to residues 1 to 371 of a 371 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290669.1 ATP-binding component of transport system for maltose	Maltose/maltodextrin import ATP-binding protein malK	Sugar ABC transporter, ATP-binding protein	ATP-binding protein of sugar ABC transporter	Sugar ABC transporter	bifunctional ABC superfamily (atp_bind), maltose transport protein; phenotypic repressor of mal operon; IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter MalK	similar to Salmonella typhi CT18 maltose/maltodextrin transport ATP-binding protein maltose/maltodextrin transport ATP-binding protein	ABC transporter ATPase component	maltose/maltodextrin transport ATP-binding protein MalK	ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems, ATPase component MalK protein	Maltose/maltodextrin import ATP-binding protein malK	Code: G; COG: COG3839 ATP-binding component of transport system for maltose	Citation: Kaneko, T. et. al. (2000) DNA Res.  7:331-338. ABC sugar transporter, ATPase subunit	ATPase	ABC transporter related	ABC sugar transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF03459	Maltose/maltodextrin import ATP-binding protein malK	
ECOLI03885	Maltoporin	Maltoporin	Maltoporin precursor	Maltoporin	Maltoporin	Maltoporin	Residues 1 to 446 of 446 are 99 pct identical to residues 1 to 446 of a 446 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290670.1 phage lambda receptor protein; maltose high-affinity receptor	Maltoporin-1	Maltoporin	Maltoporin	IPR003192: Porin, LamB type phage lambda receptor protein; maltose high-affinity receptor, facilitates diffusion of maltose and maltoseoligosaccharides	similar to Salmonella typhi CT18 maltoporin precursor maltoporin precursor	Maltoporin 1	Maltoporin	identified by match to protein family HMM PF02264 maltoporin VCA1028 , putative	maltose high-affinity receptor; Code: G; COG: COG4580 phage lambda receptor protein	Maltoporin	Maltoporin precursor	Maltoporin	Maltoporin precursor	Maltoporin precursor	Maltoporin	Maltoporin	maltoporin precursor Code: G; COG: COG4580	Maltoporin precursor	maltoporin precursor	Porin, LamB type precursor	Maltoporin precursor	Maltoporin	

ECOLI03886	Maltose operon periplasmic protein	hypothetical maltose operon periplasmic protein	Maltose operon periplasmic protein	Maltose operon periplasmic protein, putative	Putative maltose operon periplasmic protein	Periplasmic protein of mal regulon	Residues 4 to 309 of 309 are 99 pct identical to residues 1 to 306 of a 306 aa protein from Escherichia coli O157:H7 ref: NP_313047.1 periplasmic protein of mal regulon	Maltose operon periplasmic protein	Maltose operon periplasmic protein	periplasmic protein of mal regulon	similar to Salmonella typhi CT18 maltose operon periplasmic protein maltose operon periplasmic protein	Maltose operon periplasmic protein	Hypothetical protein	Maltose operon periplasmic protein	periplasmic protein of mal regulon	hypothetical protein	Maltose operon periplasmic protein	Maltose operon periplasmic protein precursor	Maltose operon periplasmic protein	Maltose operon periplasmic protein precursor	maltose operon periplasmic protein identified by match to protein family HMM PF07148	Maltose operon periplasmic protein precursor	Maltose operon periplasmic protein	periplasmic protein of mal regulon	Maltose operon periplasmic protein precursor	hypothetical protein KEGG: yps:YPTB3641 maltose operon periplasmic protein	maltose operon periplasmic protein precursor MalM	Hypothetical protein	Maltose operon periplasmic precursor	

ECOLI03887	Putative uncharacterized protein yjbI	Code: S; COG: COG1357 conserved hypothetical protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjbI	Putative uncharacterized protein yjbI	Putative uncharacterized protein yjbI	Putative uncharacterized protein yjbI	YjbI protein	Non-LEE-encoded type III secreted effector	pseudo T3SS effector-like protein EspX-homolog, N-terminal	Putative uncharacterized protein	
ECOLI03888	Chorismate--pyruvate lyase	Probable chorismate--pyruvate lyase	Probable chorismate--pyruvate lyase	Chorismate--pyruvate lyase	hypothetical chorismate-pyruvate lyase	Chorismate--pyruvate lyase	Probable chorismate--pyruvate lyase	Probable chorismate--pyruvate lyase	Chorismate--pyruvate lyase	Probable chorismate--pyruvate lyase	Probable chorismate--pyruvate lyase	Chorismate--pyruvate lyase	Probable chorismate--pyruvate lyase	Chorismate-pyruvate lyase	Residues 1 to 202 of 202 are 99 pct identical to residues 1 to 202 of a 202 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290673.1 chorismate lyase	Chorismate--pyruvate lyase	Chorismate--pyruvate lyase	chorismate pyruvate lyase	similar to Salmonella typhi CT18 chorismate lyase chorismate lyase	Probable chorismate--pyruvate lyase	Chorismate--pyruvate lyase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme chorismate pyruvate lyase	Probable chorismate--pyruvate lyase	chorismate--pyruvate lyase	Probable chorismate--pyruvate lyase	chorismate lyase 4-hydroxybenzoate synthetase	Chorismate--pyruvate lyase	Chorismate:pyruvate lyase, 4-hydroxybenzoate synthetase	identified by similarity to SP:P26602; match to protein family HMM PF04345 putative chorismate--pyruvate lyase	
ECOLI03889	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	Digeranylgeranylglyceryl phosphate synthase	4-hydroxybenzoate octaprenyltransferase, putative	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate-octaprenyl transferase	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	Putative uncharacterized protein PH0027	4-hydroxybenzoate octaprenyltransferase	identified by match to PFAM protein family HMM PF03208 4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	Probable 4-hydroxybenzoate-octaprenyltransferase	4-hydroxybenzoate octaprenyl transferase related protein	UbiA-like 4-hydroxybenzoate octaprenyltransferase, probable	hypothetical 4-hydroxybenzoate octaprenyltransferase	Probable 4-hydroxybenzoate-octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	Putative 4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	Protoheme IX farnesyltransferase	4-hydroxybenzoate octaprenyltransferase	4-hydroxybenzoate octaprenyltransferase	
ECOLI03890	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	putative glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Residues 1 to 755 of 755 are 99 pct identical to residues 73 to 827 of a 827 aa protein from Escherichia coli K12 ref: NP_418465.1 glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	PlsB protein	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	PlsB2	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark glycerol-3-phosphate acyltransferase	IPR002123: Phospholipid/glycerol acyltransferase glycerolphosphate acyltransferase activity	similar to Salmonella typhi CT18 glycerol-3-phosphate acyltransferase glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Glycerol-3-phosphate acyltransferase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme glycerol-3-phosphate acyltransferase	
ECOLI03891	Diacylglycerol kinase	Diacylglycerol kinase	Diacylglycerol kinase	Possible diacylglycerol kinase	Diacylglycerol kinase	DgkA	Diacylglycerol kinase	Diacylglycerol kinase	Putative uncharacterized protein	Diacylglycerol kinase	Diacylglycerol kinase	Diacylglycerol kinase	Probable diacylglycerol kinase	Lmo1464 protein	Putative kinase	Diacylglycerol kinase	putative diacylglycerol kinase	Diacylglycerol kinase	Diacylglycerol kinase	similar to SP:P00556; identified by sequence similarity; putative diacylglycerol kinase	Diacylglycerol kinase	Diacylglycerol kinase	Putative diacylglycerol kinase	Putative diacylglycerol kinase	Diacylglycerol kinase	Diacylglycerol kinase	predicted by Codon_usage predicted by Homology predicted by FrameD DIACYLGLYCEROL KINASE PROTEIN	Putative diacylglycerol kinase	DIACYLGLYCEROL KINASE	
ECOLI03892	LexA repressor	SOS function regulatory protein	LexA repressor	LexA repressor	SOS function regulatory protein, LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	SOS function regulatory protein, LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	LexA repressor	putative LexA repressor	LexA repressor	LexA repressor	identified by match to protein family HMM PF00717; match to protein family HMM PF01726; match to protein family HMM TIGR00498 LexA repressor	LexA repressor	LexA repressor	LexA repressor	
ECOLI03893	DNA-damage-inducible protein F	DNA-damage-inducible protein	Putative uncharacterized protein	DNA-damage-inducible protein F	Putative DNA-damage-inducible membrane protein	DNA-damage-inducible protein F	putative DNA-damage-inducible protein F	DNA-damage-inducible protein F	identified by match to TIGR protein family HMM TIGR01695 DNA-damage-inducible protein F, putative	DNA-damage-inducible protein F	DNA-damage-inducible protein F	DNA-damage-inducible protein F	DNA-damage-inducible protein F	DNA-damage-inducible protein F	Putative DNA-damage inducible protein	DNA-damage-inducible protein F	DNA-damage-inducible protein	Putative cation efflux pump, DNA-damage-inducible protein	DNA-damage-inducible protein	Residues 1 to 459 of 459 are 99 pct identical to residues 1 to 459 of a 459 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290678.1 DNA-damage-inducible protein F	identified by similarity to SP:P28303; match to protein family HMM PF01554; match to protein family HMM TIGR00797 DNA-damage-inducible protein F	DNA-damage-inducible F protein	Biological Process: multidrug transport (GO:0006855), Molecular Function: drug transporter activity (GO:0015238), Molecular Function: antiporter activity (GO:0015297), Cellular Component: membrane (GO:0016020) putative multidrug extrusion protein	DNA-damage-inducible protein F, induced by UV and mitomycin C; SOS, lexA regulon	similar to Salmonella typhi CT18 putative DNA-damage-inducible membrane protein putative DNA-damage-inducible membrane protein	DNA-damage-inducible protein; COG0534 putative cation efflux pump	Na(+) driven multidrug efflux pump	Similar to Escherichia coli DNA-damage-inducible protein F DinF or B4044 SWALL:DINF_ECOLI (SWALL:P28303) (459 aa) fasta scores: E(): 3e-48, 36.42% id in 442 aa, and to Bacteroides thetaiotaomicron DNA-damage-inducible protein F BT2241 SWALL:AAO77348 (EMBL:AE016935) (439 aa) fasta scores: E(): 1e-136, 78.67% id in 436 aa, and to Vibrio cholerae DNA-damage-inducible protein F vc0090 SWALL:Q9KVQ1 (EMBL:AE004100) (454 aa) fasta scores: E(): 4.5e-60, 39.85% id in 419 aa putative DNA-damage-inducible protein F	DNA-damage-inducible protein F	
ECOLI03894	UPF0337 protein yjbJ	UPF0337 protein XCC3924	UPF0337 protein PA4738	UPF0337 protein Atu4724	UPF0337 protein yjbJ	UPF0337 protein yjbJ	UPF0337 protein BP1738	UPF0337 protein BB3586	UPF0337 protein ECA0631	best DB hits: BLAST: pir:F83054; conserved hypothetical protein PA4738 [imported] -; E=1e-05 swissprot:P32691; YJBJ_ECOLI PROTEIN YJBJ ----- pir: D65212; E=2e-05 embl:CAB98302.2; (AL390114) probable 8.3 Kd protein in dinf-qor; E=0.032 COG: PA4738; COG3237 Uncharacterized BCR; E=1e-06 conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical hypothetical protein with amino acid permeases signature	UPF0337 protein BPP3185	UPF0337 protein yjbJ	UPF0337 protein pc0632	hypothetical protein	UPF0337 protein RPA4217	Residues 3 to 71 of 71 are 100 pct identical to residues 1 to 69 of a 69 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290679.1 orf, conserved hypothetical protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	UPF0337 protein XAC4007	UPF0337 protein yjbJ	conserved hypothetical protein	conserved hypothetical protein	CsbD-like	CsbD-like protein	Code: S; COG: COG3237 conserved hypothetical protein	CsbD-like protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	
ECOLI03895	Zinc uptake regulation protein	Transcriptional regulator Fur family	Transcriptional regulator fur family	Fur family protein	Putative zinc uptake regulation protein	Transcriptional regulator np20	Putative zinc uptake regulation protein	Transcriptional regulator, Fur family	Zinc uptake regulation protein	Putative Fur family transcriptional regulator	putative zinc uptake regulation protein	Zinc uptake regulation protein	similar to GP:15156604; identified by sequence similarity; putative transcriptional regulator, Fur family	Zinc uptake regulation protein, putative	Putative regulatory protein	Putative regulatory protein	Zinc uptake regulation protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE ZINC UPTAKE REGULATION PROTEIN	Zinc uptake regulation protein, putative	Putative regulatory protein	Transcriptional regulator, putative	ZINC UPTAKE REGULATION PROTEIN	Putative zinc uptake regulation protein	Putative regulator	transcriptional regulator (Fur family)	Transcriptional regulator, Fur family; probable zinc uptake regulator ZUR	Transcriptional regulator	Residues 1 to 191 of 191 are 99 pct identical to residues 1 to 191 of a 191 aa protein from Escherichia coli K12 ref: NP_418470.1 putative regulator	Putative regulatory protein	
ECOLI03896	Uncharacterized protein yjbL	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjbL	Putative uncharacterized protein yjbL	YjbL protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI03897	Uncharacterized protein yjbM	Residues 1 to 235 of 235 are 98 pct identical to residues 1 to 235 of a 235 aa protein from Escherichia coli K12 ref: NP_418472.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjbM	Putative uncharacterized protein yjbM	pseudo	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI03898	tRNA-dihydrouridine synthase A	tRNA-dihydrouridine synthase A	Probable tRNA-dihydrouridine synthase 2	tRNA-dihydrouridine synthase A	similarity to HYPOTHETICAL PROTEINS YJBN_ECOLI and Y926_YEAST;07_1170, similarity to HYPOTHETICAL PROTEINS (UPF0034=NIFR3/SMM1 family) YJBN_ECOLI and Y926_YEAST, gene found by Glimmer;	tRNA-dihydrouridine synthase A	Uncharacterized protein family UPF0034	Putative uncharacterized protein	TIM-barrel protein, yjbN family	Putative uncharacterized protein	tRNA-dihydrouridine synthase A	tRNA-dihydrouridine synthase A	NifR3/Smm1 family protein	Putative uncharacterized protein	Putative uncharacterized protein	NifR3-like protein	Putative uncharacterized protein	tRNA-dihydrouridine synthase A	Putative uncharacterized protein	putative NifR3/Smm1 family protein	Putative uncharacterized protein BB0225	tRNA-dihydrouridine synthase A	identified by match to PFAM protein family HMM PF03641 TIM-barrel protein, yjbN family	tRNA-dihydrouridine synthase A	Putative uncharacterized protein	Putative uncharacterized protein	tRNA-dihydrouridine synthase A	Putative dihydrouridine synthase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	
ECOLI03899	Uncharacterized protein yjbO	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein VP2725	Putative uncharacterized protein	Putative exported protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative exported protein	Putative inner membrane protein	Hypothetical protein precursor	Hypothetical protein precursor	Hypothetical protein precursor	Putative uncharacterized protein precursor	Putative uncharacterized protein yjbO	Putative uncharacterized protein	Phage shock protein G	Shock protein G precursor	Phage shock protein G	Phage shock protein G	Phage shock protein G precursor	Phage shock protein G	Putative uncharacterized protein	Phage shock protein G	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Phage shock protein G precursor	Phage shock protein G precursor	
ECOLI03900	Quinone oxidoreductase	Quinone oxidoreductase	Quinone oxidoreductase	Quinone oxidoreductase	Quinone oxidoreductase	Quinone oxidoreductase, putative	Quinone oxidoreductase	go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737] conserved hypothetical protein	Quinone oxidoreductase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE QUINONE OXIDOREDUCTASE PROTEIN	Quinone oxidoreductase	Quinone oxidoreductase	QUINONE OXIDOREDUCTASE	Quinone oxidoreductase	quinone oxidoreductase	Residues 37 to 363 of 363 are 99 pct identical to residues 1 to 327 of a 327 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290684.1 quinone oxidoreductase	Quinone oxidoreductase	Probable nadph:quinone reductase, zeta-crystallin homolog oxidoreductase protein	Quinone oxidoreductase	identified by similarity to SP:P40783; match to protein family HMM PF00107 quinone oxidoreductase, putative	Quinone oxidoreductase	Quinone oxidoreductase protein	IPR002364: Quinone oxidoreductase/zeta-crystallin quinone oxidoreductase, NADPH dependent	NADPH:quinone reductase	similar to Salmonella typhi CT18 quinone oxidoreductase quinone oxidoreductase	COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases similar to NP_102293.1 quinone oxidoreductase	Zn-dependent oxidoreductases; COG0604 NADPH:quinone reductase	Quinone oxidoreductase	Quinone oxidoreductase	
ECOLI03901	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	similar to GB:M82968, SP:P26436,  and PID:338294; identified by sequence similarity; putative replicative DNA helicase	Putative replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase DnaB	DnaB replicative helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	DnaB replication fork helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Replicative DNA helicase	Probable replicative DNA helicase	
ECOLI03902	Alanine racemase, biosynthetic	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase, biosynthetic	Alanine racemase, biosynthetic	Related to alanine racemase	Alanine racemase	Alanine racemase	putative alanine racemase, biosynthetic	Alr protein	Alanine racemase, biosynthetic	Alanine racemase 1	Alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase	alanine racemase	alanine racemase	Alanine racemase	Alanine racemase	Alanine racemase 1	Putative alanine racemase	Alanine racemase, biosynthetic	similar to AX063847-1|CAC25165.1| percent identity: 68 in 362 aa alanine racemase	
ECOLI03903	Aromatic-amino-acid aminotransferase	conserved hypothetical protein;	Aspartate aminotransferase, mitochondrial [Source:GeneDB_Spombe;Acc:SPBC725.01]	DEHA2B02288p;similar to uniprot|P23542 Saccharomyces cerevisiae YLR027c AAT2 cytosolic aspartate aminotransferase;	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	pseudo	Aromatic-amino-acid aminotransferase	Tyrosine aminotransferase, tyrosine repressible	Residues 15 to 411 of 411 are 98 pct identical to residues 1 to 397 of a 397 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290687.1 tyrosine aminotransferase, tyrosine repressible	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid transaminase	IPR000796: Aspartate/other aminotransferase; IPR004838: Aminotransferases class-I pyridoxal-phosphate-binding site tyrosine aminotransferase, tyrosine repressible	similar to Salmonella typhi CT18 aromatic-amino-acid aminotransferase aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	Aromatic amino acid aminotransferase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme tyrosine aminotransferase, tyrosine repressible, PLP-dependent	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	Aromatic-amino-acid aminotransferase	identified by match to protein family HMM PF00155 aromatic-amino-acid aminotransferase	Aspartate transaminase	Aspartate transaminase	
ECOLI03904	Uncharacterized protein yjbS	Putative uncharacterized protein	
ECOLI03905	Class B acid phosphatase	Class B acid phosphatase	Putative acid phosphatase	Diadenosine tetraphosphatase	Residues 81 to 317 of 317 are 100 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli K12 ref: NP_418479.1 diadenosine tetraphosphatase	Class B acid phosphatase	non-specific acid phosphatase/phosphotransferase, class B	similar to Salmonella typhi CT18 class B acid phosphatase precursor class B acid phosphatase precursor	Putative uncharacterized protein gbs0615	similar to SP:P32697 GB:X86971 PID:396390 PID:806548 GB:U00096; identified by sequence similarity; putative acid phosphatase, class B	Putative acid phosphatase	best blastp match gb|AAK33989.1| (AE006554) putative acid phosphatase (class B) [Streptococcus pyogenes M1 GAS] putative acid phosphatase (class B)	Similar to: HI0494, APHA_HAEIN Class B acid phosphatase	Class B acid phosphatase	identified by match to protein family HMM PF03767; match to protein family HMM TIGR01672 HAD-superfamily phosphatase, subfamily IIIB	class B acid phosphatase	Code: R; COG: COG3700 diadenosine tetraphosphatase	Code: R; COG: COG3700 diadenosine tetraphosphatase	Class B acid phosphatase	Class B acid phosphatase	class B acid phosphatase	Class B acid phosphatase	AphA, subunit of acid phosphatase/phosphotransferase	Class B acid phosphatase	HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 KEGG: stm:STM4249 non-specific acid phosphatase/phosphotransferase, class B TIGRFAM: HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 PFAM: acid phosphatase (Class B)	HAD-superfamily (subfamily iiib) phosphatase identified by match to protein family HMM PF03767; match to protein family HMM TIGR01672	Acid phosphatase, class B	diadenosine tetraphosphatase Code: R; COG: COG3700	Putative class B acid phosphatase precursor	
ECOLI03905	Class B acid phosphatase	Class B acid phosphatase	Putative acid phosphatase	Diadenosine tetraphosphatase	Residues 81 to 317 of 317 are 100 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli K12 ref: NP_418479.1 diadenosine tetraphosphatase	Class B acid phosphatase	non-specific acid phosphatase/phosphotransferase, class B	similar to Salmonella typhi CT18 class B acid phosphatase precursor class B acid phosphatase precursor	Putative uncharacterized protein gbs0615	similar to SP:P32697 GB:X86971 PID:396390 PID:806548 GB:U00096; identified by sequence similarity; putative acid phosphatase, class B	Putative acid phosphatase	best blastp match gb|AAK33989.1| (AE006554) putative acid phosphatase (class B) [Streptococcus pyogenes M1 GAS] putative acid phosphatase (class B)	Similar to: HI0494, APHA_HAEIN Class B acid phosphatase	Class B acid phosphatase	identified by match to protein family HMM PF03767; match to protein family HMM TIGR01672 HAD-superfamily phosphatase, subfamily IIIB	class B acid phosphatase	Code: R; COG: COG3700 diadenosine tetraphosphatase	Code: R; COG: COG3700 diadenosine tetraphosphatase	Class B acid phosphatase	Class B acid phosphatase	class B acid phosphatase	Class B acid phosphatase	AphA, subunit of acid phosphatase/phosphotransferase	Class B acid phosphatase	HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 KEGG: stm:STM4249 non-specific acid phosphatase/phosphotransferase, class B TIGRFAM: HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 PFAM: acid phosphatase (Class B)	HAD-superfamily (subfamily iiib) phosphatase identified by match to protein family HMM PF03767; match to protein family HMM TIGR01672	Acid phosphatase, class B	diadenosine tetraphosphatase Code: R; COG: COG3700	Putative class B acid phosphatase precursor	
ECOLI03906	UPF0047 protein yjbQ	highly similar to wi|NCU09013.1 Neurospora crassa NCU09013.1 and sp|O14155 Schizosaccharomyces pombe SPAC4A8.  02C. gene, start by similarity	Blr1192 protein	UPF0047 protein C4A8.02c [Source:GeneDB_Spombe;Acc:SPAC4A8.02c]	UPF0047 protein MJ1081	Putative uncharacterized protein	UPF0047 protein sll1880	DEHA2G16500p;similar to CA5052|IPF3708 Candida albicans;	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	UPF0047 protein yjbQ	Alr3214 protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein yjbQ	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	PMID: 10567266 best DB hits: BLAST: pir:C75256; conserved hypothetical protein - Deinococcus radiodurans; E=3e-46 gb:AAG48795.1; AF332432_1 (AF332432) unknown protein [Arabidopsis; E=3e-40 pir:A82330; conserved hypothetical protein VC0373 [imported] -; E=4e-38 COG: DR2598; COG0432 Uncharacterized ACR; E=3e-47 PFAM: PF01894; Uncharacterised protein family UPF00; E=5.6e-43 conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein VP2732	
ECOLI03907	Uncharacterized protein yjbR	Putative uncharacterized protein STY4447	Putative uncharacterized protein	Hypothetical Cytosolic Protein	Putative uncharacterized protein yyaQ	Protein yjbR	Putative uncharacterized protein VP1762	Uncharacterized protein yjbR	Residues 1 to 118 of 118 are 99 pct identical to residues 1 to 118 of a 118 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290690.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Similar to Bacteroides thetaiotaomicron conserved hypothetical protein BT2237 SWALL:AAO77344 (EMBL:AE016935) (118 aa) fasta scores: E(): 6.7e-37, 80.5% id in 118 aa, and to Streptomyces coelicolor hypothetical protein sco2535 or scc77.02 SWALL:Q9RDF6 (EMBL:AL939113) (124 aa) fasta scores: E(): 6.5e-11, 38.79% id in 116 aa, and to Streptomyces lavendulae MmcQ SWALL:Q9X5T5 (EMBL:AF127374) (123 aa) fasta scores: E(): 3.2e-08, 30.7% id in 114 aa conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	Code: S; COG: COG2315 conserved hypothetical protein	Code: S; COG: COG2315 conserved hypothetical protein	Code: S; COG: COG2315; orf conserved hypothetical protein	Putative cytoplasmic protein YjbR	Hypothetical protein	Putative uncharacterized protein yjbR	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: S; COG: COG2315	Hypothetical protein	putative cytoplasmic protein YjbR	Putative uncharacterized protein	conserved hypothetical protein	
ECOLI03908	UvrABC system protein A	Excinuclease ABC subunit A	Excinuclease ABC, subunit A	Excinuclease ABC, A subunit	UvrABC system protein A	Excinuclease ABC, subunit A	UvrABC system protein A	UvrABC system protein A	UvrABC system protein A	UvrABC system protein A	UvrABC system protein A	Excision nuclease chain A	UvrABC system protein A	Excinuclease ABC subunit A	Excinuclease ABC, subunit A	UvrABC system protein A	Excinuclease ABC subunit A	UvrABC system protein A	Excinuclease ABC subunit A	Excinuclease ABC subunit A	Excinuclease ABC, A subunit, ATP/GTP-binding site motif A (P-loop):ABC transporter	UvrABC system protein A	Excinuclease ABC, subunit A	Excinuclease ABC, subunit A	UvrABC system protein A	UvrABC system protein A	UvrABC system protein A	UvrABC system protein A	Excinuclease ABC subunit A	
ECOLI03909	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein 1	Single-stranded DNA-binding protein 1	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein 1	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	putative single-strand binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	similar to GB:L03419, and PID:292023; identified by sequence similarity; putative single-stranded DNA-binding protein family	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	
ECOLI03910	Uncharacterized protein yjcB	Hypothetical protein yjcB	Putative uncharacterized protein yjcB	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjcB	conserved hypothetical protein	conserved hypothetical protein	Putative inner membrane protein	Putative uncharacterized protein yjcB	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Predicted inner membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative membrane protein	Putative membrane protein	Putative membrane protein	
ECOLI03911	Uncharacterized protein yjcC	hypothetical protein	Hypothetical protein yjcC	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein yjcC	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1790496 (529 aa). BLAST with identity of 98% in 526 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	IPR001633: EAL domain putative diguanylate cyclase/phosphodiesterase	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative diguanylate cyclase/phosphodiesterase	Code: T; COG: COG4943 conserved hypothetical protein	pseudo predicted signal transduction protein containing sensor and EAL domains; COG4943	Putative uncharacterized protein	Putative uncharacterized protein yjcC	conserved hypothetical protein Code: T; COG: COG4943	YjcC, predicted signal transduction protein (EAL domain containing protein)	EAL domain protein precursor	Putative uncharacterized protein yjcC	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Cyclic diguanylate phosphodiesterase (EAL) domain protein	EAL domain protein precursor	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative exported protein	Cyclic diguanylate phosphodiesterase (EAL) domain protein	Cyclic diguanylate phosphodiesterase (EAL) domain protein	
ECOLI03912	Regulatory protein soxS	hypothetical bacterial regulatory helix-turn-helix protein	Regulatory protein soxS	identified by match to protein family HMM PF00165 transcriptional regulator, AraC family	Regulatory protein soxS	Residues 1 to 107 of 107 are 99 pct identical to residues 1 to 107 of a 107 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290695.1 regulation of superoxide response regulon	InterProMatches:IPR000005; adaptative response to DNA alkylation positive regulation of the adaAB operon,Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355) methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family)	IPR000005: Helix-turn-helix, AraC type transcriptional activator of superoxide response regulon (AraC/XylS family)	similar to Salmonella typhi CT18 regulatory protein SoxS regulatory protein SoxS	Regulatory protein soxS	Code: K; COG: COG2207 regulation of superoxide response regulon	Code: K; COG: COG2207 regulation of superoxide response regulon	Regulatory protein SoxS	Regulation of superoxide response regulon	regulation of superoxide response regulon Code: K; COG: COG2207	AraC-family transcriptional regulator	Transcriptional regulator, AraC family	Regulation of superoxide response regulon	Helix-turn-helix-domain containing protein, AraC type	Putative uncharacterized protein	Regulatory protein SoxS	Transcriptional regulator, AraC family	DNA-binding transcriptional dual regulator	Regulatory protein SoxS	Transcriptional regulator, AraC family	Regulatory protein SoxS	Putative uncharacterized protein	Methylphosphotriester-DNA alkyltransferase	Putative uncharacterized protein	
ECOLI03913	Redox-sensitive transcriptional activator soxR	Putative MerR-family transcriptional regulator	Redox-sensitive transcriptional activator soxR	Predicted transcriptional regulator	Transcriptional regulator, MerR family	Redox-sensitive transcriptional activator soxR	putative SoxR protein	Redox-sensing activator of soxS	Redox-sensitive transcriptional activator soxR	SoxR protein	Putative MerR-family transcriptional regulator	Putative MerR-family transcriptional regulator	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Putative MerR-family transcriptional regulator	Putative transcriptional regulator	SoxR protein	Redox-sensitive transcriptional activator soxR	probable transcriptional activator	SCI30A.18c, probable merR-family transcriptional regulator, len: 175aa; similar to many egs. TR:CAA09641 (EMBL:AJ011500) from Streptomyces violaceoruber Tu22 (196 aa) fasta scores; opt: 698, z-score: 833.1, E(): 0, (64.1% identity in 167 aa overlap) and SW:SOXR_ECOLI SoxR transcriptional regulator from Escherichia coli (154 aa) fasta scores; opt: 575, z-score: 689.9, E(): 4.3e-31, (60.3% identity in 146 aa overlap). Contains Pfam match to entry PF00376 merR, Bacterial regulatory proteins, merR family. putative merR-family transcriptional regulator	Predicted transcriptional regulator	Residues 1 to 154 of 154 are 100 pct identical to residues 1 to 154 of a 154 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290696.1 redox-sensing activator of soxS	identified by match to protein family HMM PF00376; match to protein family HMM TIGR01950 redox-sensitive transcriptional activator SoxR	HTH-type transcriptional activator soxR homolog	Redox-sensitive transcriptional activator SoxR	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark transcriptional regulator soxR family	IPR000551: Bacterial regulatory protein, MerR family redox-sensing transcriptional activator SoxR, contains iron-sulfur center for redox-sensing (MerR family)	similar to Salmonella typhi CT18 SoxR protein SoxR protein	Transcriptional regulator soxR family	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator transcriptional activator for superoxide response, contains iron-sulfur center for redox-sensing (MerR family)	

ECOLI03914	Inner membrane protein yjcD	Putative xanthine/uracil permeases family protein	Hypothetical protein	Xanthine/uracil permease family protein	glimmer prediction; similar to conserved hypothetical protein - Deinococcus radiodurans (strain R1) ACCESSION   A75615. Some similarity to members of xanthine/uracil permease family putative integral membrane transporter	Putative permease yjcD	Residues 1 to 449 of 449 are 99 pct identical to residues 1 to 449 of a 449 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290697.1 orf, conserved hypothetical protein	putative xanthine/uracil permease family	similar to Salmonella typhi CT18 putative xanthine/uracil permeases family protein putative xanthine/uracil permeases family protein	Putative xanthine/uracil permease family	Code: R; COG: COG2252 conserved hypothetical protein	Code: R; COG: COG2252; orf conserved hypothetical protein	Putative xanthine/uracil permeases family protein YjcD	Xanthine/uracil/vitamin C permease	Xanthine/uracil/vitamin C permease	Putative uncharacterized protein yjcD	Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter KEGG: sfr:Sfri_3048 xanthine/uracil/vitamin C permease	Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter KEGG: son:SO1236 xanthine/uracil permease family protein	conserved hypothetical protein Code: R; COG: COG2252	Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter KEGG: son:SO1236 xanthine/uracil permease family protein	Xanthine/uracil/vitamin C permease	putative xanthine/uracil permeases family protein YjcD	Magnaporthe grisea hypothetical protein	Xanthine/uracil/vitamin C permease	Xanthine/uracil/vitamin C permease	Xanthine/uracil/vitamin C permease	Xanthine/uracil/vitamin C permease	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter KEGG: shw:Sputw3181_1199 xanthine/uracil/vitamin C permease Xanthine/uracil/vitamin C permease	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter KEGG: slo:Shew_2795 xanthine/uracil/vitamin C permease Xanthine/uracil/vitamin C permease	
ECOLI03915	Uncharacterized Na(+)/H(+) exchanger yjcE	Na+:H+ antiporter	Na+:H+ antiporter	Probable sodium/hydrogen antiporter	Putative sodium/hydrogen exchanger family protein	Sodium/hydrogen exchanger family protein	Putative Na(+)/H(+) exchanger yjcE	Putative sodium/hydrogen antiporter	Putative uncharacterized protein yjcE	Na+:H+ antiporter	Putative uncharacterized protein	SC4A10.04c, possible Na+/H+ antiporter, len: 528 aa; shows weak similarity to the N-terminal portion of eukaryotic Na+/H+ antiporters e.g. SW:NAH3_RAT (EMBL:M85300) Rattus norvegicus sodium/hydrogen exchanger 3 (831 aa), fasta scores; opt: 271 z-score: 293.1 E(): 5.3e-09, 25.8% identity in 481 aa overlap. Similar to many putative Na+/H+ antiporters e.g. SW:YU23_MYCTU (EMBL:Z77163) Mycobacterium tuberculosis putative Na(+)/H(+) exchanger (542 aa) (31.4% identity in 528 aa overlap). Shows weak similarity to SC66T3.14c (EMBL:AL079348) S.coelicolor probable Na(+)/H(+) antiporter (514 aa) (27.5% identity in 545 aa overlap).  Contains hydrophobic, possible membrane-spanning regions.  Contains Pfam match to entry PF00999 Na_H_Exchanger, Sodium/hydrogen exchanger family putative Na+/H+ antiporter	Residues 1 to 549 of 549 are 100 pct identical to residues 1 to 549 of a 549 aa protein from Escherichia coli O157:H7 ref: NP_313074.1 orf, conserved hypothetical protein	Putative putative Na(+)/H(+) exchanger protein	Putative uncharacterized protein	Similar to putative Na(+)/H(+) exchanger protein YjcE of Escherichia coli	Na(+)/H(+) antiporter	identified by match to protein family HMM PF00999 Na+/H+ antiporter, putative	Na+:H+ antiporter	Hypothetical protein SE0404	YjcE	Na+/H+ antiporter	Uncharacterized Na(+)/H(+) exchanger Rv2287/MT2345	Mb2309, yjcE, len: 542 aa. Equivalent to Rv2287, len: 542 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 542 aa overlap). Probable yjcE, conserved integral membrane transport protein, similar to eukaryote NA+/H+ exchangers e.g. YJCE_ECOLI|P32703|B4065 Putative Na(+)/H(+) exchanger from Escherichia coli (549 aa), FASTA scores: opt: 436, E(): 5.6e-21, (29.4% identity in 555 aa overlap); etc. SEEMS TO BELONG TO CPA1 FAMILY (NA(+)/H(+) EXCHANGER FAMILY). Probable conserved integral membrane transport protein YjcE	monovalent cation:H+ antiporter	Sodium/hydrogen exchanger family protein; antiporter, integral membrane protein	putative CPA1 family, Na:H transport protein	similar to Salmonella typhi CT18 putative sodium/hydrogen exchanger family protein putative sodium/hydrogen exchanger family protein	conserved hypothetical protein	
ECOLI03916	Uncharacterized protein yjcF	Residues 1 to 430 of 430 are 92 pct identical to residues 1 to 430 of a 430 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290699.1 orf, conserved hypothetical protein	Pentapeptide repeat	Pentapeptide repeat protein	Pentapeptide repeat protein	Conserved protein	Pentapeptide repeat protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjcF	Putative uncharacterized protein yjcF	Putative uncharacterized protein yjcF	Non-LEE-encoded type III secreted effector	
ECOLI03917	Cation/acetate symporter actP	similar to sp|P33413 Saccharomyces cerevisiae YHL016c DUR3 urea transport protein singleton, start by similarity	Blr4115 protein	Probable urea active transporter 3 [Source:GeneDB_Spombe;Acc:SPAC869.03c]	Solute:Na+ symporter	Solute:Na+ symporter	DEHA2E23320p;uniprot|P33413 Saccharomyces cerevisiae YHL016C DUR3 Plasma membrane urea transporter expression is highly sensitive to nitrogen catabolite repression and induced by allophanate the last intermediate of the allantoin degradative pathway (not found?);	Probable sodium:solute symporter	Sodium:solute symporter protein	Cation/acetate symporter actP	Sodium/solute symporter family protein	Na+/proline, Na+/panthothenate symporters and related permeases	Sodium/proline symporter	Sodium/solute symporter family protein; possible sodium/proline symporter	Cation/acetate symporter actP	identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813 sodium/solute symporter family protein	go_component: plasma membrane [goid 0005886]; go_function: urea transporter activity [goid 0015204]; go_process: urea transport [goid 0015840] urea transporter, putative	Cation/acetate symporter actP	PMID: 7934828 best DB hits: BLAST: swissprot:P39599; YWCA_BACSU HYPOTHETICAL 55.0 KD PROTEIN IN; E=3e-34 pir:F83241; probable sodium:solute symporter PA3234 [imported] -; E=1e-33 gb:AAK01502.1; (AF241171) putative amino acid transport protein; E=3e-32 COG: BS_ywcA; COG0591 Na+/proline, Na+/panthothenate symporters and; E=3e-35 yjcG; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=7e-33 XF2251; COG0591 Na+/proline, Na+/panthothenate symporters and; E=2e-30 PFAM: PF00474; Sodium:solute symporter famil; E=3.8e-37 putative symporter ywcA	Sodium:solute symporter family protein	PUTATIVE SODIUM:SOLUTE SYMPORTER	sodium:solute symporter	Putative transporter	Putative transport membrane protein	Cation/acetate symporter actP	CDS_ID OB2442 Na(+)-dependent symporter	Residues 1 to 549 of 549 are 99 pct identical to residues 1 to 549 of a 549 aa protein from Escherichia coli K12 ref: NP_418491.1 putative transport protein	Cation/acetate symporter actP	Cation/acetate symporter actP	
ECOLI03918	Inner membrane protein yjcH	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Hypothetical protein yjcH	Membrane protein, putative	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein secY	Putative uncharacterized protein	Putative uncharacterized protein yjcH	Residues 2 to 105 of 105 are 100 pct identical to residues 1 to 104 of a 104 aa protein from Escherichia coli K12 ref: NP_418492.1 orf, conserved hypothetical protein	Putative membrane protein	Similar to putative membrane protein YjcH of Escherichia coli	Putative uncharacterized protein	putative inner membrane protein	Putative uncharacterized protein	Putative membrane protein	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein; putative membrane protein	Putative uncharacterized protein	Putative inner membrane protein	conserved hypothetical protein	identified by match to protein family HMM PF04341 Protein of unknown function, DUF485 superfamily	identified by match to protein family HMM PF04341 Protein of unknown function, DUF485 superfamily	Protein of unknown function DUF485	Protein of unknown function DUF485	similar to Rhodobacter capsulatus strain. conserved hypothetical protein	Code: S; COG: COG3162 conserved hypothetical protein	
ECOLI03919	Acetyl-coenzyme A synthetase	acetyl-coenzyme A synthetase 1;	similar to sp|P52910 Saccharomyces cerevisiae YLR153c ACS2 acetyl-coenzyme A synthetase, hypothetical start	Acetyl-coenzyme A synthetase	gi|13626095|sp|Q9Y7B5|ACS2_KLULA Kluyveromyces lactis Acetyl-coenzyme A synthetase 2 (Acetate--CoA ligase 2) (Acyl-activating enzyme 2), start by similarity	Acetyl-coenzyme A synthetase	DEHA2E05676p;similar to uniprot|Q01574 Saccharomyces cerevisiae YAL054C ACS1 Acetyl-coA synthetase isoform expressed during growth on nonfermentable carbon sources and under aerobic conditions;	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase 1	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	Probable acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	putative acetyl-CoA synthase	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	similar to GP:15076353; identified by sequence similarity; putative acetyl-CoA synthetase	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	Acetyl-coenzyme A synthetase	go_component: cytosol [goid 0005829]; go_function: acetate-CoA ligase activity [goid 0003987]; go_process: acetyl-CoA biosynthesis [goid 0006085] acetate--CoA ligase, putative	Acetyl-coenzyme A synthetase	pseudo	
ECOLI03920	Cytochrome c-552	Cytochrome c-552	Cytochrome c-552	Cytochrome c-552	Cytochrome c-552 precursor	Cytochrome c-552	Cytochrome c-552	Cytochrome c-552	putative Formate-dependent nitrite reductase,periplasmic cytochrome c552 subunit	Nitrite reductase periplasmic cytochrome c552	Cytochrome c-552 precursor	Cytochrome c nitrite reductase, catalytic subunit NfrA, putative	Cytochrome c-552 precursor	Cytochrome c-552	Cytochrome C nitrite reductase catalytic subunit	Cytochrome c-552	Cytochrome c-552	Cytochrome c-552	Cytochrome c-552	Residues 12 to 489 of 489 are 99 pct identical to residues 1 to 478 of a 478 aa protein from Escherichia coli O157:H7 ref: NP_313079.1 periplasmic cytochrome c(552)	IPR000345: Cytochrome c heme-binding site nitrite reductase periplasmic cytochrome c(552)	similar to Salmonella typhi CT18 cytochrome c552 precursor cytochrome c552 precursor	cytochrome c552	ammonia-forming cytochrome c nitrite reductase; cytochrome c nitrite reductase; Similar to: HI1069, NRFA_HAEIN cytochrome c552	Similar to Escherichia coli, and Escherichia coli O157:H7 cytochrome c552 precursor NrfA or B4070 or Z5669 or ECS5052 SWALL:NRFA_ECOLI (SWALL:P32050) (478 aa) fasta scores: E(): 5.1e-82, 46% id in 450 aa, and to Bacteroides thetaiotaomicron cytochrome c552 precursor BT1417 SWALL:AAO76524 (EMBL:AE016931) (493 aa) fasta scores: E(): 1.3e-170, 83.53% id in 492 aa, and to Pasteurella multocida cytochrome c552 precursor NrfA or pm0023 SWALL:NRFA_PASMU (SWALL:Q9CPL4) (510 aa) fasta scores: E(): 2.2e-87, 48.77% id in 449 aa putative exported cytochrome c552	Nitrite reductase, periplasmic cytochrome c subunit NrfA protein	Cytochrome c-552	nitrate reductase, cytochrome c552	Code: P; COG: COG3303 periplasmic cytochrome c(552): plays a role in nitrite reduction	
ECOLI03921	Cytochrome c-type protein nrfB	Cytochrome c-type protein NrfB	hypothetical cytochrome c-type protein NrfB precursor	Cytochrome c-type protein nrfB precursor	Cytochrome C-type protein	Cytochrome c-type protein NrfB	Formate-dependent nitrite reductase; a penta- haeme cytochrome c	Nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit	Residues 1 to 190 of 190 are 97 pct identical to residues 1 to 190 of a 190 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290704.1 formate-dependent nitrite reductase; a penta-haeme cytochrome c	IPR000345: Cytochrome c heme-binding site formate-dependent nitrite reductase; a penta-haeme cytochrome c	similar to Salmonella typhi CT18 cytochrome c-type protein NrfB precursor cytochrome c-type protein NrfB precursor	cytochrome c-type protein NrfB	Formate-dependent nitrite reductase	a penta-heme cytochrome c formate-dependent nitrite reductase	formate-dependent nitrite reductase complex penta-heme cytochrome c	Cytochrome c-type protein NrfB	Formate-dependent nitrite reductase precursor	Hypothetical protein precursor	NrfB, formate-dependent nitrite reductase; a penta-haeme cytochrome c	cytochrome c-type protein NrfB	conserved hypothetical protein KEGG: sfr:Sfri_0615 hypothetical protein	Formate-dependent nitrite reductase, penta-heme cytochrome c	formate-dependent nitrite reductase KEGG: sfx:S3598 formate-dependent nitrite reductase	Cytochrome c-type protein nrfB precursor	formate-dependent nitrite reductase KEGG: she:Shewmr4_3764 formate-dependent nitrite reductase	Formate-dependent nitrite reductase precursor	NrfB, formate-dependent nitrite reductase; a penta-haeme cytochrome c	Cytochrome c-type protein NrfB	Formate-dependent nitrite reductase precursor	
ECOLI03922	Protein nrfC	NrfC	Formate-dependent nitrite reductase complex, Fe-S protein	Cytochrome c-type biogenesis protein	putative nitrite reductase, Fe-S protein (NrfC)	NrfC protein	Nitrite reductase complex component	Iron-sulfur cluster-binding protein	Nitrite reductase, Fe-S protein	Protein nrfC	Fe-S-cluster-containing hydrogenase component 1	Residues 1 to 223 of 223 are 100 pct identical to residues 1 to 223 of a 223 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290705.1 formate-dependent nitrite reductase; Fe-S centers	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain putative nitrite reductase; formate-dependent, Fe-S centers	similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein cytochrome c-type biogenesis protein	conserved 4Fe-4S binding domain protein	thiosulfate reductase electron transport subunit	Similar to: HI1067, NRFC_HAEIN NrfC, Fe-S-cluster-containing hydrogenase component 1	Fe-S-cluster-containing hydrogenase components 1 HybA protein	Putative formate-dependent nitrite reductase	nitrate reductase, Fe-S protein	Fe-S centers; Code: C; COG: COG0437 formate-dependent nitrite reductase	Code: C; COG: COG0437 formate-dependent nitrite reductase complex Fe-S centers	4Fe-4S ferredoxin, iron-sulfur binding protein	iron-sulfur cluster-binding protein identified by match to protein family HMM PF00037	NrfC protein	Twin-arginine translocation pathway signal precursor	Twin-arginine translocation pathway signal precursor	NrfC protein	4Fe-4S ferredoxin, iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: cch:Cag_0619 NrfC protein	
ECOLI03923	Protein nrfD	Protein nrfD homolog	Polysulfide reductase, subunit C, putative	NrfD	Formate-dependent nitrite reductase complex, NrfD protein	Cytochrome c-type biogenesis protein	Putative nitrate reductase, formate dependent (NrfD)	NrfD protein	Formate-dependent nitrite reductase, nrfD protein	Nitrite reductase complex component	Nitrate reductase, formate dependent	Formate-dependent nitrate reductase complex; transmembrane protein	Formate-dependent nitrite reductase, membrane component	Residues 1 to 318 of 318 are 99 pct identical to residues 1 to 318 of a 318 aa protein from Escherichia coli K12 ref: NP_418497.1 formate-dependent nitrate reductase complex; transmembrane protein	putative nitrate reductase, formate dependent	similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein cytochrome c-type biogenesis protein	NrfD protein	Similar to: HI1066, NRFD_HAEIN NrfD, formate-dependent nitrite reductase, membrane component	Formate-dependent nitrite reductase, membrane component NrfD protein	Putative formate dependent nitrate reductase	nitrate reductase, transmembrane protein	Polysulphide reductase, NrfD	Code: P; COG: COG3301 formate-dependent nitrate reductase complex transmembrane protein	putative molybdopterin oxidoreductase, membrane subunit	Code: P; COG: COG3301 formate-dependent nitrate reductase complex transmembrane protein	Polysulphide reductase, NrfD	polysulfide reductase, subunit C, putative	polysulfide reductase, subunit C, putative	NrfD protein	
ECOLI03924	Cytochrome c-type biogenesis protein nrfE	Cytochrome c-type biogenesis protein nrfE	NrfE	Formate-dependent nitrite reductase complex, NrfE protein	Cytochrome c-type biogenesis protein	hypothetical cytochrome c-type biogenesis protein CcmF	Cytochrome c-type biogenesis protein nrfE	Cytochrome C-type biogenesis protein	NrfE	Formate-dependent nitrite reductase; possible assembly function	Cytochrome c biogenesis factor	Residues 9 to 559 of 560 are 98 pct identical to residues 1 to 551 of a 552 aa protein from Escherichia coli O157:H7 ref: NP_313083.1 cytochrome c-type biogenesis protein NrfE	IPR000515: Binding-protein-dependent transport systems inner membrane component; IPR002541: Cytochrome c assembly protein; IPR003567: Cytochrome c-type biogenesis protein;IPR003568: Cytochrome c-type biogenesis protein CcmF;IPR003570: Cytochrome c-type biogenesis protein NrfE;IPR005616: Cytochrome C biogenesis protein formate-dependent nitrite reductase; involved in attachment of haem c to cytochrome c552	similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein cytochrome c-type biogenesis protein	heme chaperone--apocytochrome heme-lyase	Similar to: HI0936, NRFE_HAEIN cytochrome c-type biogenesis protein NrfE	Cytochrome c biogenesis factor CcmF protein	Formate-dependent nitrite reductase	cytochrome c-type biogenesis protein	possible assembly function; Code: O; COG: COG1138 formate-dependent nitrite reductase	Code: O; COG: COG1138 formate-dependent nitrite reductase possible assembly protein	Cytochrome c-type biogenesis protein NrfE	Formate-dependent nitrite reductase subunit nrfE; possible assembly function	cytochrome c-type biogenesis protein CcmF identified by match to protein family HMM PF01578; match to protein family HMM TIGR00353	cytochrome c assembly protein PFAM: cytochrome c assembly protein KEGG: she:Shewmr4_0487 cytochrome c-type biogenesis protein CcmF	Cytochrome c-type biogenesis protein NrfE	Cytochrome c-type biogenesis protein nrfE Code: O; COG: COG1138	formate-dependent nitrite reductase subunit nrfE	Putative uncharacterized protein	
ECOLI03925	Formate-dependent nitrite reductase complex subunit nrfF	Cytochrome c-type biogenesis protein CycL	NrfF	Cytochrome c-type biogenesis protein ccmH	Putative uncharacterized protein VV1256	Cytochrome C-type biogenesis protein ccmH	Cytochrome c-type biogenesis protein	Cytochrome c-type biogenesis protein CcmH, putative	Formate-dependent nitrite reductase complex nrfF subunit	Cytochrome C-type biogenesis protein	Cytochrome c-type biogenesis protein CcmH	Formate-dependent nitrite reductase complex subunit	Cytochrome c-type biogenesis protein CycL	Cytochrome C-type biogenesis protein	NrfF	Formate-dependent nitrite reductase complex subunit nrfF	Residues 1 to 127 of 127 are 98 pct identical to residues 1 to 127 of a 127 aa protein from Escherichia coli K12 ref: NP_418499.1 part of formate-dependent nitrite reductase complex	Putative cytochrome C-type biogenesis protein CcmH	Cytochrome c-type biogenesis protein CcmH	conserved gene c-type cytochrome biogenesis protein CcmH	Cytochrome c-type biogenesis protein CcmH	identified by match to protein family HMM PF03918 cytochrome c biogenesis family protein	Cytochrome-c-type biogenesis protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark C-type cytochrome biogenesis protein	Cytochrome c-type biogenesis protein	Uncharacterized protein involved in biosynthesis of c-type cytochromes	similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein cytochrome c-type biogenesis protein	Cytochrome c-type biogenesis protein cycL	cytochrome c-type biogenesis protein CcmH	
ECOLI03926	Formate-dependent nitrite reductase complex subunit nrfG	Formate-dependent nitrite reductase complex, NrfG protein	NrfG protein	hypothetical formate-dependent nitrite reductase complex, NrfG protein	Formate-dependent nitrite reductase complex nrfG subunit	Formate-dependent nitrite reductase complex subunit	Putaive YfrE protein	Formate-dependent nitrite reductase complex subunit nrfG	Cytochrome c biogenesis factor	Residues 1 to 198 of 198 are 98 pct identical to residues 1 to 198 of a 198 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290709.1 part of formate-dependent nitrite reductase complex	similar to cytochrome c-type biogenesis protein hypothetical protein	conserved gene cytochrome c type biogenesis protein CcmH	similar to cytochrome c-type biogenesis protein hypothetical protein	IPR001440: TPR repeat part of formate-dependent nitrite reductase complex; involved in attachment of haem c to cytochrome c552	similar to Salmonella typhi CT18 NrfG protein NrfG protein	cytochrome c-type biogenesis protein CcmI	Component of formate-dependent nitrite reductase complex	Code: O; COG: COG4235 component of formate-dependent nitrite reductase complex	part of formate-dependent nitrite reductase complex; Code: O; COG: COG4235 NrfG	Formate-dependent nitrite reductase complex NrfG subunit	Formate-dependent nitrite reductase complex NrfG subunit	part of formate-dependent nitrite reductase complex Code: O; COG: COG4235	formate-dependent nitrite reductase complex NrfG subunit	Cytochrome c type biogenesis protein CcmH	KEGG: son:SO_0482 formate-dependent nitrite reductase, NrfG protein hypothetical protein	Putative uncharacterized protein	Formate-dependent nitrite reductase complex, subunit NrfG	Heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG	Formate-dependent nitrite reductase complex, subunit NrfG	
ECOLI03927	Proton glutamate symport protein	Proton/sodium-glutamate symport protein	Sodium/dicarboxylate symporter family protein	Proton-glutamate symporter	Proton/sodium-glutamate symport protein	Proton glutamate symport protein	Proton/glutamate symporter family protein	Proton/sodium-glutamate symport protein	Proton/sodium-glutamate symport protein	Proton glutamate symport protein	identified by match to protein family HMM PF00375 proton/glutamate symporter family protein	Proton glutamate symport protein	Proton/glutamate symporter	proton/sodium:glutamate symporter	Glutamate-aspartate symport protein	Residues 1 to 437 of 437 are 99 pct identical to residues 1 to 437 of a 437 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290710.1 glutamate-aspartate symport protein	Proton glutamate symport protein	Proton/sodium-glutamate symport protein	Proton/sodium-glutamate symport protein	identified by similarity to EGAD:19948; match to protein family HMM PF00375 proton/sodium-glutamate symport protein	Proton/sodium-glutamate symport protein	InterProMatches:IPR001991; Biological Process: dicarboxylic acid transport (GO:0006835), Cellular Component: membrane (GO:0016020), Molecular Function: sodium:dicarboxylate symporter activity (GO:0017153) proton/sodium-glutamate symport protein	Proton glutamate symport protein	IPR001991: Sodium:dicarboxylate symporter DAACS family, glutamate:aspartate symport protein	similar to Salmonella typhi CT18 proton glutamate symport protein proton glutamate symport protein	proton/sodium-glutamate symport protein	Proton glutamate symport protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2472 putative proton/sodium-glutamate symport protein	proton/sodium-glutamate symport protein	
ECOLI03928	Uncharacterized protein yjcO	Hypothetical protein yjcO	Uncharacterized protein yjcO	Residues 1 to 229 of 229 are 100 pct identical to residues 1 to 229 of a 229 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290711.1 orf, conserved hypothetical protein	putative TPR repeat protein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	with TRP repeat, SEL1 subfamily; COG0790 conserved hypothetical protein	Putative TPR repeat protein	This gene assignment is based partly on a multiple alignment of the best pairwise matches. conserved domain protein	Code: R; COG: COG0790 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjcO	Hsp12 variant C	conserved hypothetical protein Code: R; COG: COG0790	conserved hypothetical protein	Sel1 domain protein repeat-containing protein precursor	Putative uncharacterized protein yjcO	Putative uncharacterized protein	Sel1 repeat protein	Conserved protein	Beta-lactamase HcpA	Sel1 repeat protein	Sel1 domain protein repeat-containing protein precursor	Sel1 repeat protein	Sel1 domain protein repeat-containing protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Sel1 domain protein repeat-containing protein	Putative exported protein	
ECOLI03929	Formate dehydrogenase H	Formate dehydrogenase, alpha subunit homolog	Selenocysteine-containing anaerobic dehydrogenase	679aa long hypothetical formate dehydrogenase	Formate ferredoxin oxidoreductase [FMOR] alpha subunit	Putative formate dehydrogenase, major subunit	Probable formate dehydrogenase, alpha subunit	Formate dehydrogenase alpha subunit	Formate dehydrogenase alpha subunit	Formate dehydrogenase alpha chain	Formate dehydrogenase H	Probable formate dehydrogenase, alpha chain	Formate dehydrogenase H	formate dehydrogenase alpha subunit	Formate dehydrogenase	Formate dehydrogenase alpha subunit	PUTATIVE FORMATE DEHYDROGENASE, ALPHA SUBUNIT	Formate dehydrogenase	SC4B5.11c, respiratory chain oxidoreductase, len: 642 aa; similar to the C-terminal region of many proteins involved in electron transfer e.g. TR:P77908 (EMBL:U73807) FdhA formate dehydrogenase alpha subunit from Moorella thermoacetica (893 aa) fasta scores; opt: 1532, z-score: 1338.5, E(): 0, (43.1% identity in 619 aa overlap).  Contains Pfam match to entry PF00384 molybdopterin, Prokaryotic molybdopterin oxidoreductases, score 95.80, E-value 6.2e-30. Considering the corresponding homolgies, this CDS may have previously been located directly downsteam of SC4B5.09c. putative respiratory chain oxidoreductase	similar to Escherichia coli K12 selenopolypeptide subunit of formate dehydrogenase H gi: 3868721 (716 aa).  BLAST with identity of 98% in 716 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	similar to Salmonella typhi CT18 formate dehydrogenase H; selenocysteine formate dehydrogenase H	Formate dehydrogenase, alpha subunit	Formate dehydrogenase	Hypothetical formate dehydrogenase, alpha subunit	Formate dehydrogenase, alpha subunit	formate dehydrogenase alpha subunit	formate dehydrogenase, alpha subunit	Molybdopterin oxidoreductase	formate dehydrogenase, alpha subunit TIGRFAM: formate dehydrogenase, alpha subunit: (1.1e-256) PFAM: ferredoxin: (0.0011) 4Fe-4S ferredoxin, iron-sulfur binding: (9.6e-06) molybdopterin oxidoreductase: (2.5e-108) molydopterin dinucleotide-binding region: (2.4e-41) molybdopterin oxidoreductase Fe4S4 region: (3.7e-22) KEGG: sil:SPO0834 formate dehydrogenase, alpha subunit, ev=0.0, 75% identity	
ECOLI03929	Formate dehydrogenase H	Formate dehydrogenase, alpha subunit homolog	Selenocysteine-containing anaerobic dehydrogenase	679aa long hypothetical formate dehydrogenase	Formate ferredoxin oxidoreductase [FMOR] alpha subunit	Putative formate dehydrogenase, major subunit	Probable formate dehydrogenase, alpha subunit	Formate dehydrogenase alpha subunit	Formate dehydrogenase alpha subunit	Formate dehydrogenase alpha chain	Formate dehydrogenase H	Probable formate dehydrogenase, alpha chain	Formate dehydrogenase H	formate dehydrogenase alpha subunit	Formate dehydrogenase	Formate dehydrogenase alpha subunit	PUTATIVE FORMATE DEHYDROGENASE, ALPHA SUBUNIT	Formate dehydrogenase	SC4B5.11c, respiratory chain oxidoreductase, len: 642 aa; similar to the C-terminal region of many proteins involved in electron transfer e.g. TR:P77908 (EMBL:U73807) FdhA formate dehydrogenase alpha subunit from Moorella thermoacetica (893 aa) fasta scores; opt: 1532, z-score: 1338.5, E(): 0, (43.1% identity in 619 aa overlap).  Contains Pfam match to entry PF00384 molybdopterin, Prokaryotic molybdopterin oxidoreductases, score 95.80, E-value 6.2e-30. Considering the corresponding homolgies, this CDS may have previously been located directly downsteam of SC4B5.09c. putative respiratory chain oxidoreductase	similar to Escherichia coli K12 selenopolypeptide subunit of formate dehydrogenase H gi: 3868721 (716 aa).  BLAST with identity of 98% in 716 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. pseudo	similar to Salmonella typhi CT18 formate dehydrogenase H; selenocysteine formate dehydrogenase H	Formate dehydrogenase, alpha subunit	Formate dehydrogenase	Hypothetical formate dehydrogenase, alpha subunit	Formate dehydrogenase, alpha subunit	formate dehydrogenase alpha subunit	formate dehydrogenase, alpha subunit	Molybdopterin oxidoreductase	formate dehydrogenase, alpha subunit TIGRFAM: formate dehydrogenase, alpha subunit: (1.1e-256) PFAM: ferredoxin: (0.0011) 4Fe-4S ferredoxin, iron-sulfur binding: (9.6e-06) molybdopterin oxidoreductase: (2.5e-108) molydopterin dinucleotide-binding region: (2.4e-41) molybdopterin oxidoreductase Fe4S4 region: (3.7e-22) KEGG: sil:SPO0834 formate dehydrogenase, alpha subunit, ev=0.0, 75% identity	
ECOLI03930	Multidrug resistance outer membrane protein mdtP	Multidrug resistance outer membrane protein mdtP precursor	Multidrug resistance outer membrane protein mdtP	Residues 1 to 488 of 488 are 99 pct identical to residues 1 to 488 of a 488 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290713.1 putative enzyme	Code: MU; COG: COG1538 putative enzyme	RND efflux system, outer membrane lipoprotein, NodT family	Putative outer membrane efflux protein	Putative enzyme	MFS efflux system, outer membrane lipoprotein, NodT family	putative enzyme Code: MU; COG: COG1538	putative multidrug efflux system component	Putative enzyme	Putative uncharacterized protein	RND efflux system, outer membrane lipoprotein, NodT family	Predicted outer membrane factor of efflux pump	RND efflux system, outer membrane lipoprotein, NodT family	RND efflux system, outer membrane lipoprotein, NodT family precursor	RND efflux system, outer membrane lipoprotein, NodT family	RND efflux system, outer membrane lipoprotein, NodT family	Multidrug resistance outer membrane protein MdtP	RND efflux system, outer membrane lipoprotein, NodT family	Putative uncharacterized protein	Outer membrane factor of efflux pump	Outer membrane factor of efflux pump	Outer membrane factor of efflux pump	Outer membrane factor of efflux pump	Outer membrane factor of efflux pump	Predicted outer membrane factor of efflux pump	Outer membrane factor of efflux pump	
ECOLI03931	Multidrug resistance protein mdtO	Multidrug resistance protein mdtO	Residues 1 to 680 of 680 are 97 pct identical to residues 1 to 683 of a 683 aa protein YJCQ_ECOLI sp: P32715 orf, conserved hypothetical protein	Putative membrane protein	Possible PET family efflux transporter	Putative transmembrane protein	Fusaric acid resistance protein conserved region	Code: S; COG: COG1289 putative enzyme	Code: S; COG: COG1289 putative enzyme	putative component of efflux pump	Fusaric acid resistance protein	Fusaric acid resistance protein conserved region precursor	Hypothetical transporter YjcQ	Putative membrane protein	Fusaric acid resistance protein conserved region	Putative uncharacterized protein	fusaric acid resistance protein conserved region KEGG: reu:Reut_B4353 fusaric acid resistance protein conserved region	Membrane protein	fusaric acid resistance protein conserved region KEGG: bcn:Bcen_3646 fusaric acid resistance protein conserved region	Conserved hypothetical membrane protein, putative efflux pump	Putative membrane protein	putative enzyme Code: S; COG: COG1289	Membrane protein	putative multidrug efflux system component	Putative enzyme	Putative uncharacterized protein	Multidrug resistance protein MdtO	Putative multidrug resistance protein mdtO	Predicted multidrug efflux system component	
ECOLI03932	Multidrug resistance protein mdtN	hypothetical protein	Multidrug resistance protein mdtN	Residues 1 to 326 of 326 are 99 pct identical to residues 18 to 343 of a 343 aa protein from Escherichia coli K12 ref: NP_418506.1 putative membrane protein	similar to Multidrug resistance efflux pump hypothetical protein	conserved gene multidrug resistance efflux pump PmrA	Code: V; COG: COG1566 putative membrane protein	Code: V; COG: COG1566 putative membrane protein	Secretion protein HlyD	transporter, membrane fusion protein (MFP) family identified by match to protein family HMM PF00529	Secretion protein, HlyD family	Putative HlyD family secretion protein YjcR	Putative uncharacterized protein yjcR	putative membrane protein Code: V; COG: COG1566	putative membrane fusion protein of efflux pump	Putative secretion protein HlyD	Putative uncharacterized protein	Multidrug resistance protein MdtN	Predicted membrane fusion protein of efflux pump	Multidrug resistance protein MdtN	Efflux pump membrane protein precursor	Multidrug resistance protein MdtN	Efflux transporter, RND family, MFP subunit precursor	Secretion protein HlyD family protein	Multidrug resistance protein MdtN	Multidrug resistance protein MdtN	Putative uncharacterized protein	DevB-like secretion protein	Membrane fusion protein of efflux pump	
ECOLI03933	Uncharacterized protein ytcA	formate dehydrogenase H	formate dehydrogenase H	hypothetical protein	Hypothetical membrane protein	Uncharacterized protein ytcA	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Formate dehydrogenase H	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein ytcA	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ytcA	conserved predicted protein	Formate dehydrogenase H	
ECOLI03934	Uncharacterized protein yjcS	Alkyl sulfatase family protein	SepA protein	hypothetical beta-lactamase	Hypothetical protein yjcS	Putative uncharacterized protein	Metallo-beta-lactamase superfamily protein	Putative uncharacterized protein	Putative uncharacterized protein yjcS	identified by match to protein family HMM PF00753 metallo-beta-lactamase family protein	Putative uncharacterized protein	POSSIBLE HYDROLASE	Mb3788c, -, len: 626 aa. Equivalent to Rv3762c, len: 626 aa, from Mycobacterium tuberculosis strain H37Rv, (99.7% identity in 626 aa overlap). Possible hydrolase (EC 3.-.-.-), highly similar to hypothetical proteins and beta-lactamases (EC 3.5.2.6) e.g. Q9RL04|SC5G9.23 HYPOTHETICAL 70.3 KDA PROTEIN from Streptomyces coelicolor (648 aa), FASTA scores: opt: 2088, E(): 3.7e-124, (52.9% identity in 624 aa overlap); P32717|YJCS_ECOLI|B4083 HYPOTHETICAL 73.2 KDA PROTEIN from Escherichia coli strain K12 (661 aa), FASTA scores: opt: 1911, E(): 5.7e-113, (46.9% identity in 631 aa overlap); Q9A824|CC1540 METALLO-BETA-LACTAMASE FAMILY PROTEIN from Caulobacter crescentus (647 aa), FASTA scores: opt: 1891, E(): 1e-111, (48.55% identity in 628 aa overlap); Q08347|YOL164W CHROMOSOME XV READING FRAME ORF from Saccharomyces cerevisiae (Baker's yeast) (646 aa) FASTA scores: opt: 1829, E(): 8.4e-108, (45.7% identity in 615 aa overlap); Q9I5I9|PA0740 PROBABLE BETA-LACTAMASE from Pseudomonas aeruginosa (658 aa), FASTA scores: opt: 1699, E(): 1.4e-99, (43.15% identity in 630 aa overlap); Q52556|SDSA ALKYL SULFATASE (protein involved in the degradation of sulfate esters of long-chain primaryal cohols e.g. SDS sodium dodecyl sulfate) from Pseudomonas sp (528 aa), FASTA scores: opt: 841, E(): 1.7e-45, (33.7% identity in 534 aa overlap); etc. N-terminual end also highly similar to Q48790|SEPA SEPA PROTEIN (protein implicated in cell separation) from Listeria monocytogenes (391 aa), FASTA scores: opt: 1256, E(): 8.3e-72, (49.6% identity in 363 aa overlap). Also slight similarity to P96253|Rv0407|MTCY22G10.03 HYPOTHETICAL 37.0 KDA PROTEIN from Mycobacterium tuberculosis (336 aa). PUTATIVE HYDROLASE	identified by match to protein family HMM PF00753 metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753 metallo-beta-lactamase family protein	Beta-lactamase-like	Code: Q; COG: COG2015 conserved hypothetical protein	Code: Q; COG: COG2015 conserved hypothetical protein	Beta-lactamase-like protein	beta-lactamase-like	Putative uncharacterized protein	Beta-lactamase domain protein precursor	Beta-lactamase domain protein precursor	Beta-lactamase-like protein	beta-lactamase-like	beta-lactamase-like protein	Putative uncharacterized protein yjcS	beta-lactamase domain protein PFAM: beta-lactamase domain protein KEGG: mmc:Mmcs_4972 beta-lactamase-like protein	beta-lactamase domain protein PFAM: beta-lactamase domain protein KEGG: son:SO0357 metallo-beta-lactamase superfamily protein	
ECOLI03935	D-allose kinase	Putative glucose kinase	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE SUGAR KINASE PROTEIN	Transcriptional repressor of the xylose operon	Similar to Q97IW7 Fructokinase from Clostridium acetobutylicum (288 aa). FASTA: opt: 932 Z-score: 1175.6 E(): 1.4e-57 Smith-Waterman score: 932; 47.603identity in 292 aa overlap. Fructokinase	D-allose kinase	Fructokinase Similar to Q97IW7 Fructokinase from Clostridium acetobutylicum (288 aa). FASTA: opt: 932 Z-score: 1175.6 E(): 1.4e-57 Smith-Waterman score: 932; 47.603identity in 292 aa overlap.	D-allose kinase	ROK family protein	Fructokinase	Fructokinase	ROK family protein	ROK family protein	D-allose kinase	Glucokinase	ROK (Repressor, ORF, Kinase) family protein	Glucose/fructose kinase, ROK family	D-allose kinase	ROK family protein	D-allose kinase	ROK family protein	Putative uncharacterized protein	ROK family protein	D-allose kinase	D-allose kinase	D-allose kinase	D-allose kinase	D-allose kinase	AlsK protein	
ECOLI03936	D-allulose-6-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase family protein	Pentose-5-phosphate-3-epimerase	ribulose-phosphate 3-epimerase, putative	identified by similarity to SP:P32719; match to protein family HMM PF00834 D-allulose-6-phosphate 3-epimerase	transcript_id=ENSETET00000001313	D-allulose-6-phosphate 3-epimerase	D-allulose-6-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase PFAM: ribulose-phosphate 3-epimerase KEGG: eci:UTI89_C4681 D-allulose-6-phosphate 3-epimerase	ribulose-phosphate 3-epimerase, putative previous systematic id LinJ35.3200	D-allulose-6-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Allulose-6-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	D-allulose-6-phosphate 3-epimerase AlsE	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Putative uncharacterized protein	D-allulose-6-phosphate 3-epimerase	D-allulose-6-phosphate 3-epimerase	D-allulose-6-phosphate 3-epimerase	Allulose-6-phosphate 3-epimerase	Allulose-6-phosphate 3-epimerase	Allulose-6-phosphate 3-epimerase	D-allulose-6-phosphate 3-epimerase	Allulose-6-phosphate 3-epimerase	AlsE protein	D-allulose-6-phosphate 3-epimerase	Allulose-6-phosphate 3-epimerase	
ECOLI03937	D-allose transport system permease protein alsC	ABC transporter, permease protein	D-allose transport system permease protein alsC	Sugar ABC transporter permease protein	pseudo	ABC-type uncharacterized transport system, permease component	D-allose transport system permease protein AlsC	D-allose transporter subunit; membrane component of ABC superfamily	Putative sugar ABC transporter, permease protein	Monosaccharide-transporting ATPase	D-allose transport system permease protein AlsC	Monosaccharide-transporting ATPase	Putative uncharacterized protein	Putative sugar ABC transporter, permease protein	D-allose ABC transporter permease component	Branched-chain amino acid ABC transporter permease protein	D-allose transporter subunit ; membrane component of ABC superfamily	D-allose transporter subunit ; membrane component of ABC superfamily	pseudo	D-allose transporter subunit	AlsC protein	ABC transporter, ATP-binding protein	D-allose transporter subunit	D-allose transport system permease allose transport protein (ABC superfamily, membrane)	D-allose transporter subunit	D-allose transporter permease protein	
ECOLI03938	D-allose import ATP-binding protein alsA	Sugar ABC transporter ATP-binding protein	D-allose transport ATP-binding protein AlsA	ABC transporter related	D-allose transport ATP-binding protein AlsA	D-allose transport ATP-binding protein AlsA	Fused D-allose transporter subunits of ABC superfamily: ATP-binding components	ABC transporter related	D-allose transport ATP-binding protein AlsA	ABC transporter related	Putative uncharacterized protein	D-allose ABC transporter ATP-binding component	Fused D-allose transporter subunits of ABC superfamily: ATP-binding components	Fused D-allose transporter subunits of ABC superfamily: ATP-binding components	Fused D-allose transporter subunits of ABC superfamily: ATP-binding components	Fused D-allose transporter subunits of ABC superfamily: ATP binding components	AlsA protein	Fused D-allose transporter subunits of ABC superfamily: ATP-binding components	ABC transporter related	D-allose transporter ATP-binding protein AlsA	
ECOLI03939	D-allose-binding periplasmic protein	D-allose-binding periplasmic protein	Sugar ABC transporter substrate-binding protein	D-allose-binding periplasmic protein	D-allose-binding periplasmic protein	ABC sugar transporter, periplasmic ligand binding protein	Sugar binding protein of ABC transporter	D-allose-binding periplasmic protein precursor	D-ribose-binding protein	KEGG: shn:Shewana3_0349 periplasmic sugar-binding protein, putative periplasmic sugar-binding protein, putative	Monosaccharide-transporting ATPase precursor	D-allose transporter subunit; periplasmic-binding component of ABC superfamily	Monosaccharide-transporting ATPase precursor	D-allose-binding periplasmic protein AlsB	Monosaccharide-transporting ATPase precursor	Putative uncharacterized protein	D-allose ABC transporter substrate binding component	D-allose transporter subunit ; periplasmic- binding component of ABC superfamily	D-ribose-binding periplasmic protein, putative	D-allose transporter subunit ; periplasmic- binding component of ABC superfamily	D-allose transporter subunit ; periplasmic- binding component of ABC superfamily	D-allose transporter subunit	AlsB protein	Putative D-ribose-binding protein	D-allose transporter subunit	Periplasmic binding protein/LacI transcriptional regulator	D-allose-binding periplasmic protein allose transport protein (ABC superfamily, peri_bind)	periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: efe:EFER_4282 D-allose transporter subunit ; periplasmic-binding component of ABC superfamily	D-allose transporter subunit	
ECOLI03940	HTH-type transcriptional regulator rpiR	EF0065	HTH-type transcriptional regulator rpiR	Putative phosphosugar-binding transcriptional regulator	Putative phosphosugar-binding transcriptional regulator	Putative transcriptional regulator	SCD95A.41c, possible transcriptional regulator, len: 320 aa; similar to TR:CAB84834 (EMBL:AL162756) Neisseria meningitidis putative transcriptional regulator NMA1605, 282 aa; fasta scores: opt: 476 z-score: 465.7 E(): 1.8e-18; 33.5% identity in 281 aa overlap and to SW:HEXR_ECOLI (EMBL:AE000279) Escherichia coli hex regulon repressor HexR, 289 aa; fasta scores: opt: 337 z-score: 333.6 E(): 4.1e-11; 26.6% identity in 274 aa overlap.  Contains Pfam matches to entries PF01418 HTH_6, Helix-turn-helix domain, rpiR family and PF01380 SIS, SIS domain putative transcriptional regulator	Transcription regulator	Transcriptional regulator, RpiR family	transcriptional regulator, RpiR family	Transcriptional regulator	IPR000281: Helix-turn-helix protein RpiR; IPR001347: Sugar isomerase (SIS) Protein rpiR	Putative uncharacterized protein	best blastp match gb|AAK33334.1| (AE006492) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] conserved hypothetical protein	Transcriptional regulators RpiR protein	hypothetical protein, similar to transcriptional regulator (RpiR family)	transcriptional regulator, RpiR family	Transcriptional regulator, RpiR family	Transcriptional regulator, RpiR family	transcriptional regulator, RpiR family	transcriptional regulator, RpiR family	Protein RpiR	Protein RpiR	Transcriptional regulator, RpiR family	transcriptional regulator, RpiR family PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS) KEGG: msu:MS0198 RpiR protein	Transcriptional regulator	Putative transcriptional regulator	transcriptional regulator, RpiR family PFAM: helix-turn-helix protein RpiR sugar isomerase (SIS) KEGG: hch:HCH_05772 transcriptional regulator	Putative transcription regulator	
ECOLI03941	Ribose-5-phosphate isomerase B	Ribose 5-phosphate isomerase	Ribose 5-phosphate isomerase B, putative	Ribose phosphate isomerase B	DEHA2A12320p;similar to uniprot|Q6M9B0 Neurospora crassa 29E8 Related to ribose-5-phosphate isomerase and uniprot|Q9RJR1 Streptomyces coelicolor SCO0579 SCF55 Putative ribose 5- phosphate isomerase;	Ribose-5-phosphate isomerase	Putative ribose-5-phosphate isomerase	Ribose 5-phosphate isomerase B	Ribose 5-phosphate isomerase	Lmo0736 protein	Ribose-5-phosphate isomerase B	Ribose 5-phosphate isomerase B	Ribose 5-phosphate isomerase	Product confidence : putative Gene name confidence : hypothetical putative sugar-phosphate isomerase protein	Ribose 5-phosphate isomerase	Galactosidase acetyltransferase	ribose 5-phosphate epimerase	Ribose 5-phosphate isomerase	RIBOSE-5-PHOSPHATE ISOMERASE	Ribose 5-phosphate isomerase, RpiB	Ribose 5-phosphate isomerase	RpiB	conserved hypothetical protein	identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120 ribose 5-phosphate isomerase B	Ribose 5-phosphate isomerase RpiB	RIBOSE 5-PHOSPHATE ISOMERASE	CHR28_tmp.2560, predicted protein, len = 173 aa, probably ribose 5-phosphate isomerase; predicted pI = 6.4961; good similarity to many bacterial ribose 5-phosphate isomerase proteins; contains a ribose/Galactose Isomerase domain ribose 5-phosphate isomerase, putative	identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG0698 ribose 5-phosphate isomerase B	identified by sequence similarity; putative; ORF located using Glimmer; GeneMark; Blastx; COG0698 ribose 5-phosphate isomerase B	
ECOLI03942	Uncharacterized protein yjdP	Uncharacterized protein yjdP	conserved hypothetical protein	conserved hypothetical protein	Z5694-like protein	Putative membrane protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjdP	Putative uncharacterized protein yjdP	Putative uncharacterized protein yjdP	Putative uncharacterized protein yjdP	Putative uncharacterized protein yjdP	Predicted protein	Putative uncharacterized protein yjdP	YjdP protein	Conserved protein	Conserved protein	hypothetical protein	Putative uncharacterized protein	
ECOLI03943	Protein phnP	Metallo-beta-lactamase family protein	ATP-binding protein PhnP	ATP-binding protein PhnP	249aa long hypothetical PHNP protein	Hydrolase, metal-dependent	Alkylphosphonate uptake/carbon-phosphorus lyase, membrane bound subunit, phnP homolog	ATP-binding protein phnp	PhnP protein	Putative uncharacterized protein	Metal-dependent hydrolase	PhnP protein	Putative phosphonate metabolism protein	PMID: 9403685 PMID: 1840580 best DB hits: BLAST: pir:D70166; phnP protein (phnP) homolog - Lyme disease spirochete; E=3e-47 pir:E71649; hypothetical protein RP869 - Rickettsia prowazekii; E=2e-35 ddbj:BAB02903.1; (AB028610) hydrolase-like protein [Arabidopsis; E=1e-31 COG: BB0533; COG1235 Metal-dependent hydrolases of the beta-lactamase; E=2e-48 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.1e-06 phnP protein homolog-putative hydrolase	Phosphonate metabolism protein, PhnP	Phosphonate metabolism	PhnP protein	phosphonate matabolism protein PhnP homolog, metallo-beta-lactamase superfamily	Probable hydrolase protein	PhnP protein	Similar to Borrelia burgdorferi PhnP protein BB0533 SWALL:O51483 (EMBL:AE001155) (253 aa) fasta scores: E(): 1.5e-32, 35.22% id in 247 aa, and to Escherichia coli PhnP protein B4092 SWALL:PHNP_ECOLI (SWALL:P16692) (252 aa) fasta scores: E(): 2.7e-08, 27.09% id in 262 aa putative hydrolase	metallo-beta-lactamase family protein	Metal-dependent hydrolase of the beta-lactamase superfamily	identified by similarity to SP:P16692; match to protein family HMM PF00753 phosphonate metabolism protein PhnP	Beta-lactamase-like	Metal-dependent hydrolases of the beta-lactamase superfamily I	Code: R; COG: COG1235 phosphonate metabolism	ATP-binding protein PhnP	Phosphonate metabolism	
ECOLI03944	Protein phnO	Putative acetyltransferase, secreted	Putative acetyltransferase	Acetyltransferase, GNAT family	Acetyltransferase	Acetyltransferase, GNAT family	PhnO protein	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	Putative acetyltransferase	Putative acetyltransferase	Acetyltransferase, GNAT family	Putative acetyltransferase	Putative regulator, phn operon	probable transcriptional regulator	SCH24.35c, hypothetical protein, len: 150 aa; similar to TR:Q54244 (EMBL:D29961) Streptomyces griseus phnO-like regulator for C-P lyase (150 aa), fasta scores; opt: 797 z-score: 972.8 E(): 0, 79.3% identity in 150 aa overlap and to SW:PHNO_ECOLI (EMBL:D90227), phnO, in Escherichia coli alkylphosphonate utilization operon (144 aa) (32.2% identity in 146 aa overlap). Weakly similar to TR:O86792 (EMBL:AL031317) S.coelicolor probable acetyltransferase (177 aa) (32.7% identity in 150 aa overlap). Contains Pfam match to entry PF00583 Acetyltransf, Acetyltransferase (GNAT) family, score 80.70, E-value 3.1e-20 conserved hypothetical protein	Acetyltransferase protein	IPR000182: GCN5-related N-acetyltransferase putative regulator in phn operon	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	Putative regulator in phn operon	acetyltransferase, GNAT family	Code: KR; COG: COG0454 putative regulator, phn operon	putative regulator, phn operon; Code: KR; COG: COG0454 PhnO	GCN5-related N-acetyltransferase	Code: KR; COG: COG0454 putative regulator, phn operon	PhnO protein	hypothetical protein similarity to COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	GCN5-related N-acetyltransferase	Putative regulator, phn operon	GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase KEGG: rme:Rmet_0771 GCN5-related N-acetyltransferase	
ECOLI03945	ATP-binding protein phnN	Putative uncharacterized protein	Guanylate kinase	Putative ATP-binding protein PhnN	identified by match to PFAM protein family HMM PF00005 guanylate kinase, putative	Putative phosphonate metabolism protein	Product confidence : putative putative guanylate kinase, also similar to E.  coli PhnN protein	ATP-binding protein PhnN	Alkylphosphonate utilization operon, ATP-binding protein PhnN	PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN PHNN	ATP-binding component of phosphonate transport	ATP-binding component, PhnN protein, possible kinase	PhnN protein	identified by similarity to SP:P16690 alkylphosphonate utilization protein PhnN	ATP-binding component of phosphonate transport	Phosphonate metabolism protein/1,5- bisphosphokinase (PRPP-forming) PhnN	similar to BR1099, guanylate kinase, hypothetical guanylate kinase, hypothetical	PhnN protein	Guanylate kinase	identified by similarity to SP:P16690; match to protein family HMM TIGR02322 phosphonate metabolism protein PhnN	Guanylate kinase/L-type calcium channel region	Guanylate kinase/L-type calcium channel region	Code: P; COG: COG3709 ATP-binding component of phosphonate transport	Guanylate kinase/L-type calcium channel region	Code: P; COG: COG3709 ATP-binding component of phosphonate transport	Phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN	guanylate kinase/L-type calcium channel region	Phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN	Guanylate kinase/L-type calcium channel region	
ECOLI03946	Protein phnM	Putative uncharacterized protein	Putative uncharacterized protein phnM	Phosphonate metabolism protein	Putative phosphonate metabolism PhnM protein	PhnM protein	phosphonate metabolism protein	identified by match to TIGR protein family HMM TIGR00857 PhnM protein	Product confidence : putative Gene name confidence : putative putative enzyme protein	Phosphonate metabolism protein PhnM	Alkylphosphonate utilization operon protein PhnM	PHNM PROTEIN	Phosphonate metabolism	Possible phosphonate utilization (C-P lyase) component	PhnM protein	identified by similarity to SP:P16689 alkylphosphonate utilization protein PhnM	Phosphonate metabolism protein PhnM	Phosphonate metabolism protein PhnM	similar to BR0860, PhnM protein PhnM, PhnM protein	Required for carbon-phosphorous lyase activity, also domain like urease alpha subunit	identified by similarity to SP:P16689; match to protein family HMM PF07969; match to protein family HMM TIGR02318 phosphonate metabolism protein PhnM	Amidohydrolase	Code: P; COG: COG3454 phosphonate metabolism	Amidohydrolase	phosphonate metabolism; Code: P; COG: COG3454 PhnM	Phosphonate metabolism PhnM	Phosphonate metabolism PhnM	Code: P; COG: COG3454 phosphonate metabolism	putative phosphonate metabolism protein similarity:fasta; with=UniProt:PHNM_ECOLI (EMBL:ECPHN); Escherichia coli.; phnM; PhnM protein.; length=378; id 47.340; 376 aa overlap; query 17-389; subject 2-377 similarity:fasta; with=UniProt:Q92V74 (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative enzyme protein.; length=379; id 76.781; 379 aa overlap; query 12-390; subject 1-379	
ECOLI03947	Phosphonates transport ATP-binding protein phnL	Putative phosphonates transport ATP-binding protein PhnL	Phosphonates transport ATP-binding protein phnL	go_component: cytoplasm [goid 0005737]; go_component: CCR4-NOT complex [goid 0030014]; go_function: ATP-binding cassette (ABC) transporter activity [goid 0004009]; go_process: regulation of transcription, DNA-dependent [goid 0006355] conserved hypothetical protein	Putative phosphonate ABC transporter ATP-binding protein	Phosphonate ABC transporter, ATP-binding protein	ATP-binding component of phosphonate transport system	CDS_ID OB0974 phosophonate ABC transporter ATP-binding protein	Phosphonates transport ATP-binding protein	identified by similarity to SP:P16679 alkylphosphonate utilization protein PhnL	Phosphonates transport ATP-binding protein phnL	Putative ABC phosphonate transporter, ATP binding protein, also putative C-P lyase component	identified by similarity to SP:P16679; match to protein family HMM PF00005; match to protein family HMM TIGR02324 phosphonate metabolism protein PhnL	ATPase	ABC transporter	Code: P; COG: COG4778 ATP-binding component of phosphonate transport	ABC transporter, ATP-binding protein	Code: P; COG: COG4778 ATP-binding component of phosphonate transport	ABC phosphonate transport system ATPase	phosphonate C-P lyase system protein PhnL identified by match to protein family HMM PF00005	Phosphonate C-P lyase system, PhnL	Code: P; COG: COG4778 ATP-binding component of phosphonate transport	Phosphonate C-P lyase system, PhnL KEGG: sil:SPO0473 alkylphosphonate utilization protein PhnL, ev=1e-94, 77% identity TIGRFAM: Phosphonate C-P lyase system, PhnL: (3.9e-139) PFAM: ABC transporter related: (5.7e-53) SMART: ATPase: (3e-11)	phosphonate C-P lyase system protein PhnL identified by match to protein family HMM PF00005; match to protein family HMM TIGR02324	Phosphonates transport ATP-binding protein PhnL	Phosphonates transport ATP-binding protein	Phosphonate C-P lyase system, PhnL	Phosphonates transport ATP-binding protein PhnL	Phosphonate C-P lyase system, PhnL	
ECOLI03948	Phosphonates transport ATP-binding protein phnK	Probable ATP-binding component of ABC transporter	ABC transporter, nucleotide binding/ATPase protein	Phosphonate ABC transporter, ATP-binding component	Putative phosphonates transport ATP-binding protein PhnK	Phosphonates transport ATP-binding protein phnK	Product confidence : putative Gene name confidence : probable putative phosphonate uptake ABC transporter ATP-binding protein	Phosphonate ABC transporter, ATP-binding protein	Phosphonates ABC transporter, ATP-binding protein	ATP-binding component of phosphonate transport	CDS_ID OB0972 phosphonate ABC transporter ATP-binding protein	Phosphonate ABC transporter, ATP-binding component,PhnK protein	Phosphonates transport ATP-binding protein	identified by similarity to SP:P16678 alkylphosphonate utilization protein PhnK	Phosphonate C-P lyase system protein PhnK	Putative ABC phosphonate transporter, ATP binding protein, also putative C-P lyase component	identified by similarity to SP:P16678; match to protein family HMM PF00005; match to protein family HMM TIGR02323 phosphonate metabolism protein PhnK	ABC transporter	Code: P; COG: COG4107 ATP-binding component of phosphonate transport	Code: P; COG: COG4107 ATP-binding component of phosphonate transport	ABC phosphonate transport system ATPase	Phosphonate C-P lyase system, PhnK	Code: P; COG: COG4107 ATP-binding component of phosphonate transport	putative ATP-binding component of phosphate uptake ABC transporter similarity:fasta; with=UniProt:PHNK_ECOLI (EMBL:ECPHN); Escherichia coli.; phnK; Phosphonates transport ATP-binding protein phnK.; length=252; id 68.235; 255 aa overlap; query 3-257; subject 2-251 similarity:fasta; with=UniProt:Q52988 (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; phnK; PhnK protein (Putative phosphonate uptake ABC transporter ATP-binding protein).; length=Putative phosphonate ( 258; id 89.535; 258 aa overlap; query 1-258; subject 1-258	Phosphonate C-P lyase system, PhnK KEGG: sil:SPO0472 alkylphosphonate utilization protein PhnK, ev=1e-126, 88% identity TIGRFAM: Phosphonate C-P lyase system, PhnK: (1.1e-156) PFAM: ABC transporter related: (1.6e-57) SMART: ATPase: (9.1e-20)	probable phosphonate ABC transporter, ATP-binding protein similar to SMb20763[Sinorhizobium meliloti] and AGR_C_295p [Agrobacterium tumefaciens] Similar to swissprot:Q52988 Putative location:bacterial cytoplasm Psort-Score: 0.3160; go_component: membrane [goid 0016020]; go_component: extrachromosomal DNA [goid 0046821]; go_function: ATP binding [goid 0005524]; go_function: nucleotide binding [goid 0000166]; go_function: ATP-binding cassette (ABC) transporter activity [goid 0004009]; go_process: transport [goid 0006810]	Phosphonates transport ATP-binding protein PhnK	Phosphonates transport ATP-binding protein	Phosphonates transport ATP-binding protein PhnK	
ECOLI03949	Protein phnJ	Putative uncharacterized protein	Putative uncharacterized protein phnJ	Phosphonate metabolism protein	Putative phosphonate metabolism PhnJ protein	PhnJ protein	Putative phosphonate metabolism protein	Product confidence : putative Gene name confidence : probable putative C-P (carbon-phosphorus) lyase component protein	Phosphonate metabolism protein PhnJ	Alkylphosphonate utilization operon protein PhnJ	Phosphonate metabolism	CDS_ID OB0971 phosphonate metabolism protein	Putative uncharacterized protein phnJ	PhnJ protein	identified by similarity to SP:P16688 alkylphosphonate utilization protein PhnJ	Phosphonate metabolism protein PhnJ	C-P (Carbon-phosphorus) lyase component protein	Conserved protein in phn operon	identified by similarity to SP:P16688; match to protein family HMM PF06007 phosphonate metabolism protein PhnJ	Phosphonate metabolism PhnJ	Phosphonate metabolism PhnJ	Code: P; COG: COG3627 phosphonate metabolism	phosphonate metabolism; Code: P; COG: COG3627 PhnJ	phosphonate metabolism protein PhnJ	phosphonate metabolism protein PhnJ identified by match to protein family HMM PF06007	phosphonate metabolism PhnJ	Code: P; COG: COG3627 phosphonate metabolism	putative phosphonate metabolism protein similarity:fasta; with=UniProt:PHNJ_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; phnJ; PhnJ protein.; length=297; id 90.722; 291 aa overlap; query 1-291; subject 1-291	phosphonate metabolism PhnJ PFAM: phosphonate metabolism PhnJ: (1e-209) KEGG: sil:SPO0471 alkylphosphonate utilization protein PhnJ, ev=1e-146, 91% identity	
ECOLI03950	Protein phnI	Putative uncharacterized protein	Putative uncharacterized protein phnI	Phosphonate metabolism protein	Putative phosphonate metabolism PhnI protein	PhnI protein	Putative phosphonate metabolism protein	Product confidence : putative Gene name confidence : probable putative C-P (carbon-phosphorus) lyase component protein	Phosphonate metabolism protein PhnI	Alkylphosphonate utilization operon protein PhnI	Phosphonate metabolism	CDS_ID OB0970 phosphonate metabolism protein	Putative uncharacterized protein phnI	PhnI protein	identified by similarity to SP:P16687 alkylphosphonate utilization protein PhnI	Phosphonate metabolism protein PhnI	C-P (Carbon-phosphorus) lyase component protein	Putative C-P (Carbon-phosphorous) lyase component	identified by similarity to SP:P16687; match to protein family HMM PF05861 phosphonate metabolism protein PhnI	Phosphonate metabolism	Phosphonate metabolism	Code: P; COG: COG3626 phosphonate metabolism	phosphonate metabolism; Code: P; COG: COG3626 PhnI	phosphonate metabolism protein	phosphonate metabolism protein PhnI	phosphonate metabolism	Code: P; COG: COG3626 phosphonate metabolism	putative phosphonate metabolism protein similarity:fasta; with=UniProt:PHNI_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; phnI; PhnI protein.; length=368; id 81.351; 370 aa overlap; query 1-368; subject 1-368 similarity:fasta; with=UniProt:Q8UIW2 (EMBL:AE007959); Agrobacterium tumefaciens (strain C58/ATCC 33970).; phnI; Hypothetical protein phnI (AGR_C_299p).; length=369; id 82.656; 369 aa overlap; query 1-368; subject 1-369	phosphonate metabolism PFAM: phosphonate metabolism: (8.1e-225) KEGG: sil:SPO0470 alkylphosphonate utilization protein PhnI, ev=1e-176, 85% identity	
ECOLI03951	Protein phnH	Putative uncharacterized protein	Putative uncharacterized protein phnH	Phosphonate metabolism protein	Putative phosphonate metabolism PhnH protein	PhnH protein	Product confidence : putative Gene name confidence : probable putative C-P (carbon-phosphorus) lyase component protein	PhnH protein	Alkylphosphonate utilization operon protein PhnH	Phosphonate metabolism	CDS_ID OB0969 phosphonate metabolism protein	hypothetical protein, similar to phnH gene product (phosphonate metabolism)	Putative uncharacterized protein phnH	PhnH protein	identified by similarity to SP:P16686 alkylphosphonate utilization protein PhnH	Phosphonate metabolism protein PhnH	C-P (Carbon-phosphorus) lyase component protein	Putative C-P (Carbon-phosphorous) lyase component	identified by similarity to SP:P16686; match to protein family HMM PF05845 phosphonate metabolism protein PhnH	phosphonate metabolism	phosphonate metabolism	Code: P; COG: COG3625 phosphonate metabolism	phosphonate metabolism; Code: P; COG: COG3625 PhnH	phosphonate metabolism protein PhnH	phosphonate metabolism	Code: P; COG: COG3625 phosphonate metabolism	putative phosphonate utilisation protein similarity:fasta; with=UniProt:PHNH_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; phnH; PhnH protein.; length=200; id 58.883; 197 aa overlap; query 1-197; subject 1-197 similarity:fasta; with=UniProt:Q8UIW1 (EMBL:AE007959); Agrobacterium tumefaciens (strain C58/ATCC 33970).; phnH; Hypothetical protein phnH (AGR_C_302p).; length=203; id 64.677; 201 aa overlap; query 1-201; subject 2-202	alkylphosphonate utilization protein PhnH KEGG: sil:SPO0469 alkylphosphonate utilization protein PhnH, ev=5e-59, 60% identity	Bacterial phosphonate metabolism protein (PhnH) identified by match to protein family HMM PF05845	
ECOLI03952	Protein phnG	Putative uncharacterized protein	Putative uncharacterized protein phnG	Phosphonate metabolism protein	Putative phosphonate metabolism PhnG protein	PhnG protein	Product confidence : putative Gene name confidence : probable putative C-P (carbon-phosphorus lyase component protein	Phosphonate metabolism protein PhnG	Alkylphosphonate utilization operon protein PhnG	Phosphonate metabolism	Putative uncharacterized protein phnG	PhnG protein	identified by similarity to SP:P16685 alkylphosphonate utilization protein PhnG	Phosphonate metabolism protein PhnG	C-P (Carbon-phosphorus) lyase component protein	Putative C-P (Carbon-phosphorous) lyase component	identified by similarity to SP:P16685; match to protein family HMM PF06754 phosphonate metabolism protein PhnG	alkylphosphonate utilization protein PhnG	Phosphonate metabolism PhnG	Code: P; COG: COG3624 phosphonate metabolism	phosphonate metabolism; Code: P; COG: COG3624 PhnG	phosphonate metabolism PhnG	putative phosphonate utilisation protein similarity:fasta; with=UniProt:PHNG_RHIME (EMBL:C96023); Rhizobium meliloti (Sinorhizobium meliloti).; phnG; PhnG protein.; length=156; id 60.127; 158 aa overlap; query 1-158; subject 1-156 similarity:fasta; with=UniProt:Q8UIW0 (EMBL:HS380249); Agrobacterium tumefaciens (strain C58/ATCC 33970).; phnG; Hypothetical protein phnG (AGR_C_303p).; length=153; id 61.589; 151 aa overlap; query 8-158; subject 3-153	phosphonate metabolism PhnG PFAM: phosphonate metabolism PhnG: (2.3e-68) KEGG: sil:SPO0468 alkylphosphonate utilization protein PhnG, ev=1e-42, 59% identity	alkylphosphonate utilization operon protein PhnG identified by match to protein family HMM PF06754	C-P (carbon-phosphorus) lyase component protein Putative location:bacterial cytoplasm Psort-Score: 0.3128 similar to phnG (SMb20759) [Sinorhizobium meliloti] and AGR_C_303p [Agrobacterium tumefaciens] Similar to entrez-protein:Q52984; go_component: extrachromosomal DNA [goid 0046821]; go_process: phosphonate transport [goid 0015716]	PhnG protein	Phosphonate metabolism PhnG	PhnG protein	
ECOLI03953	Probable transcriptional regulator phnF	Transcriptional regulator, GntR family	Transcriptional regulator	Putative GntR family transcriptional regulator	Probable transcriptional regulator phnF	identified by match to PFAM protein family HMM PF00392 transcriptional regulator, GntR family	Product confidence : putative putative transcriptional regulator, gntR family protein	Transcriptional regulator PhnF	Transcriptional regulator, GntR family	TRANSCRIPTIONAL REGULATOR, GNTR FAMILY	Putative transcriptional regulator	transcriptional regulator	SC9B10.14, probable transcriptional regulator, len: 255 aa; weakly similar to many eg. FARR_ECOLI P13669 fatty acyl responsive regulator (240 aa), fasta scores; opt: 220 z-score: 345.1 E(): 4.7e-12, 28.0% identity in 236 aa overlap. Contains PS00043 Bacterial regulatory proteins, gntR family signature transcriptional regulator	Probable gntR-family transcriptional regulatory protein	transcriptional regulator, GntR family	Phosphonates metabolism transcriptional regulator PhnF	similar to BR1100, transcriptional regulator, GntR family transcriptional regulator, GntR family	Putative transcriptional repressor for phosphonate uptake and biodegradation	identified by similarity to SP:P16684; match to protein family HMM PF00392; match to protein family HMM PF07702; match to protein family HMM TIGR02325 phosphonate metabolism transcriptional regulator PhnF	UbiC transcription regulator-associated	regulatory protein, GntR:Bacterial regulatory protein, GntR	Code: K; COG: COG2188 putative transcriptional regulator	Bacterial regulatory protein, GntR family	Code: K; COG: COG2188 putative transcriptional regulator	transcriptional regulator, GntR family	Transcriptional Regulator, GntR family	putative transcriptional regulator	transcriptional regulator, GntR family	Code: K; COG: COG2188 putative transcriptional regulator	


ECOLI03955	Phosphonates-binding periplasmic protein	ABC tranporter, phosphate-binding protein	Putative phosphonates-binding periplasmic protein	Phosphonates-binding periplasmic protein	phosphate uptake ABC transporter periplasmic solute-binding protein precursor	Phosphonates ABC transporter, periplasmic phosphonates-binding protein	Periplasmic binding protein component of Pn transporter	periplasmic binding protein component	Phosphonates transport system	Residues 1 to 338 of 338 are 98 pct identical to residues 1 to 338 of a 338 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290738.1 periplasmic binding protein component of Pn transporter	Putative substrate-binding periplasmic transport protein	identified by similarity to SP:P16682 phosphonate ABC transporter, periplasmic phosphonate-binding protein	putative alkylphosphonate ABC transporter	ABC periplasmic phosphonate binding protein, phnD	identified by similarity to SP:P16682; match to protein family HMM TIGR01098 phosphonate ABC transporter, periplasmic phosphonate-binding protein	Phosphonate-binding periplasmic protein	Phosphonate-binding periplasmic protein	Code: P; COG: COG3221 periplasmic binding protein component of Pn transporter	Code: P; COG: COG3221 periplasmic binding protein component of Pn transporter	phosphonate ABC tranporter, periplasmic phosphonate-binding protein identified by match to protein family HMM TIGR01098	Code: P; COG: COG3221 periplasmic binding protein component of Pn transporter	Phosphonate-binding periplasmic protein TIGRFAM: Phosphonate-binding periplasmic protein: (8.4e-86) KEGG: sil:SPO0781 phosphonate ABC transporter, periplasmic phosphonate-binding protein, ev=1e-145, 83% identity	phosphonate ABC transporter, periplasmic phosphonate-binding protein identified by match to protein family HMM TIGR01098	probable phosphonate ABC transporter, substrate-binding protein similar to mlr3355 [Mesorhizobium loti], SMb21176 [Sinorhizobium meliloti] and AGR_C_288p [Agrobacteriumtumefaciens] Similar to swissprot:Q98GF4 Putative location:bacterial periplasmic space Psort-Score: 0.9255; go_component: periplasmic space (sensu Gram-negative Bacteria) [goid 0030288]; go_function: phosphonate transporter activity [goid 0015604]; go_process: phosphonate transport [goid 0015716]	PhnD protein	Putative substrate-binding periplasmic transport protein precursor	Phosphonate-binding periplasmic protein	Phosphonate-binding periplasmic protein	Phosphonate-binding periplasmic protein	
ECOLI03956	Phosphonates import ATP-binding protein phnC	Phosphonates import ATP-binding protein phnC	Residues 1 to 231 of 231 are 99 pct identical to residues 32 to 262 of a 262 aa protein from Escherichia coli pir: D35718 phnC protein	Code: P; COG: COG3638 ATP-binding component of phosphonate transport	Code: P; COG: COG3638 ATP-binding component of phosphonate transport	Code: P; COG: COG3638 ATP-binding component of phosphonate transport	Phosphonates import ATP-binding protein phnC	Phosphonates import ATP-binding protein phnC	Phosphonate ABC transporter PhnC, ATP-binding	ATP-binding component of phosphonate transport Code: P; COG: COG3638	PhnC, phosphonate/organophosphate ester transporter subunit	Phosphonate ABC transporter, ATPase subunit	Phosphonates transport ATP-binding protein	Putative uncharacterized protein	Phosphonate ABC transporter, ATP-binding protein	Phosphonate/organophosphate ester transporter subunit; ATP-binding component of ABC superfamily	Phosphonate ABC transporter, ATP-binding protein	Phosphonate ABC transporter, ATPase subunit	Phosphonate ABC transporter, ATP-binding protein	Putative uncharacterized protein	Phosphonate ABC transporter, ATP-binding protein	Phosphonate ABC transporter ATP-binding component	Phosphonate/organophosphate ester transporter subunit ; ATP-binding component of ABC superfamily	Phosphonate/organophosphate ester transporter subunit ; ATP-binding component of ABC superfamily	Phosphonate/organophosphate ester transporter subunit ; ATP-binding component of ABC superfamily	Phosphonate/organophosphate ester transporter subunit ; ATP-binding component of ABC superfamily	Phosphonate/organophosphate ester transporter subunit ; ATP-binding component of ABC superfamily	Phosphonate ABC transporter, ATP-binding protein	Phosphonate/organophosphate ester transporter subunit	
ECOLI03957	Protein phnB	Putative uncharacterized protein	Putative uncharacterized protein VV2895	Putative uncharacterized protein	Putative uncharacterized protein STY4487	Putative uncharacterized protein	Lmo1243 protein	PhnB protein	Putative uncharacterized protein	Putative uncharacterized protein	PhnB protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	PMID: 7610040 best DB hits: BLAST: swissprot:P16681; PHNB_ECOLI PHNB PROTEIN ----- pir: C35718; E=7e-13 gb:AAG59306.1; AE005643_13 (AE005643) phnB gene product; E=8e-13 pir:B83475; hypothetical protein PA1353 [imported] - Pseudomonas; E=4e-12 COG: phnB; COG2764 Uncharacterized BCR; E=7e-14 probable PhnB protein	Putative uncharacterized protein	Putative uncharacterized protein	Glyoxalase family protein	Putative uncharacterized protein phnB	Putative uncharacterized protein phnB	BH0850 protein	Uncharacterized protein conserved in bacteria	Lin0813 protein	Putative uncharacterized protein	Residues 1 to 147 of 147 are 100 pct identical to residues 1 to 147 of a 147 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290740.1 phnB gene product	Putative uncharacterized protein phnB	Putative uncharacterized protein	Putative glyoxalase/bleomycin resistance protein/dioxygenase	hypothetical protein	
ECOLI03958	Protein phnA	Putative uncharacterized protein	Putative uncharacterized protein	Protein phnA homolog	PhnA protein	Alkylphosphonate uptake protein	PhnA protein	PhnA protein	PhnA	Putative uncharacterized protein	Putative phnA domain protein	Putative uncharacterized protein STY4488	Alkylphosphonate utilization operon protein PhnA	Lmo0370 protein	Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism	PhnA protein	Alkylphosphonate utilization operon protein	Putative uncharacterized protein	Alkylphosphonate utilization operon protein	Protein phnA	PhnA protein	identified by match to protein family HMM PF03831; match to protein family HMM TIGR00686 alkylphosphonate utilization operon protein PhnA	Probable phosphonoacetate hydrolase	PMID: 2155230 best DB hits: BLAST: pir:A83631; conserved hypothetical protein PA0128 [imported] -; E=2e-34 swissprot:P16680; PHNA_ECOLI PHNA PROTEIN ----- pir: B35718; E=5e-29 pir:F82023; PhnA protein homolog NMA0283 [imported] - Neisseria; E=3e-27 COG: PA0128; COG2824 Uncharacterized Zn-ribbon-containing protein; E=2e-35 phnA; COG2824 Uncharacterized Zn-ribbon-containing protein involved; E=5e-30 NMB0037; COG2824 Uncharacterized Zn-ribbon-containing protein; E=2e-27 PhnA protein	Alkylphosphonate utilization operon protein PhnA, putative	Alkylphosphonate uptake protein	Putative uncharacterized protein	Alkylphosphonate utilization operon protein PhnA, putative	PHNA PROTEIN	
ECOLI03959	Uncharacterized protein yjdA	Putative vimentin	Residues 1 to 742 of 742 are 98 pct identical to residues 1 to 742 of a 742 aa protein from Escherichia coli K12 ref: NP_418533.1 putative vimentin	Code: R; COG: COG0699 putative vimentin	Putative uncharacterized protein	Putative uncharacterized protein yjdA	putative vimentin	conserved hypothetical protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjdA	Putative uncharacterized protein yjdA	Putative uncharacterized protein yjdA	Putative uncharacterized protein yjdA	Putative uncharacterized protein yjdA	Conserved protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein yjdA	YjdA protein	Conserved protein with nucleoside triphosphate hydrolase domain	Putative uncharacterized protein	Conserved protein with nucleoside triphosphate hydrolase domain	conserved hypothetical protein contains nucleoside triphosphate hydrolase domain	
ECOLI03960	Uncharacterized protein yjcZ	Putative uncharacterized protein yjcZ	Residues 1 to 292 of 292 are 96 pct identical to residues 1 to 292 of a 292 aa protein YJCZ_ECOLI sp: P39267 orf, conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjcZ	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjcZ	Putative uncharacterized protein yjcZ	Putative uncharacterized protein yjcZ	Putative uncharacterized protein yjcZ	Putative uncharacterized protein yjcZ	Predicted protein	Putative uncharacterized protein yjcZ	YjcZ protein	Conserved protein	Conserved protein	
ECOLI03961	Proline/betaine transporter	MFS permease	ProP	Proline/betaine transporter	Proline/betaine transporter	Proline/betaine transporter	Proline/betaine transporter	similar to AX066917-1|CAC26686.1| percent identity: 77 in 492 aa proline/ectoine tranporter ProP	Residues 12 to 511 of 511 are 99 pct identical to residues 1 to 500 of a 500 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290744.1 low-affinity transport system; proline permease II	Putative proline/betaine transporter	Similar to major facilitator family transporter hypothetical protein	major facilitator (MFS) superfamily protein	IPR005829: Sugar transporter superfamily; IPR007114: Major facilitator superfamily MFS family, low-affinity proline transporter (proline permease II)	similar to Salmonella typhi CT18 ProP ProP	proline/betaine transporter homologue	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter proline/betaine transporter (MFS superfamily)	Proline/betaine MFS transporter	Proline/betaine transporter	proline permease II; Code: GEPR; COG: COG0477 low-affinity transport system	identified by similarity to EGAD:8124; match to protein family HMM PF00083; match to protein family HMM PF07690 osmoprotectant proline transporter	similar to gi|53771630|ref|ZP_00183937.2| [Exiguobacterium sp. 255-15], percent identity 55 in 461 aa, BLASTP E(): e-153 putative proline betaine transporter	Code: GEPR; COG: COG0477 low affinity transport system proline permease II	putative proline/betaine transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690	low-affinity transport system; Code: GEPR; COG: COG0477 proline permease II	Proline/betaine transporter	proline/betaine transporter, putative	Proline/betaine transporter	Proline/betaine transporter	Proline/betaine transporter	
ECOLI03962	Sensor protein basS/pmrB	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Two-component hybrid sensor and regulator	Sensor protein	Sensor protein	Sensor protein	Sensor protein basS/pmrB	identified by match to protein family HMM PF00512; match to protein family HMM PF02518 sensor histidine kinase	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Residues 4 to 366 of 366 are 100 pct identical to residues 1 to 363 of a 363 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290745.1 sensor protein for basR	Sensor protein	Sensor protein	identified by similarity to OMNI:NTL01HP00150; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor histidine kinase	Sensor protein	IPR003660: Histidine kinase, HAMP region; IPR004358: Bacterial sensor protein, C-terminal; IPR005467: Histidine kinase sensory kinase in two-component regulatory system with BasR	similar to Salmonella typhi Ty2 two-component sensor kinase two-component sensor kinase	
ECOLI03963	Transcriptional regulatory protein basR/pmrA	Transcriptional Regulatory protein basR/pmrA	Transcriptional regulatory protein 2-component regulatory system member	Residues 1 to 222 of 222 are 99 pct identical to residues 1 to 222 of a 222 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290746.1 transcriptional regulatory protein, member of 2-component regulatory system,	Two-component system response regulator	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal; IPR005829: Sugar transporter superfamily response regulator in two-component regulatory system with BasS (OmpR family)	similar to Salmonella typhi Ty2 two-component response regulator two-component response regulator	Two-component system response regulator	Transcriptional regulatory protein basR	member of 2-component regulatory system; Code: TK; COG: COG0745 transcriptional regulatory protein	member of 2-component regulatory system; Code: TK; COG: COG0745 transcriptional regulatory protein	Transcriptional regulatory protein BasR/PmrA	Two-component system response regulator precursor	two component transcriptional regulator, winged helix family	Transcriptional regulatory protein basR/PmrA	Two-component system response regulator precursor	Transcriptional Regulatory protein basR/pmrA Code: TK; COG: COG0745	Two-component system response regulator precursor	BasR, DNA-binding response regulator in two-component regulatory system with BasS	Response regulator in two-component regulatory system with BasS	Putative uncharacterized protein	DNA-binding response regulator BasR	Two component transcriptional regulator, winged helix family precursor	DNA-binding response regulator in two-component regulatory system with BasS	Transcriptional regulatory protein BasR/PmrA	DNA-binding response regulator BasR	Two component transcriptional regulator, winged helix family	DNA-binding response regulator BasR	Putative uncharacterized protein	
ECOLI03964	UPF0141 membrane protein yjdB	Inner membrane protein	YhbX/YhjW/YijP/YjdB family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	hypothetical membrane protein	Hypothetical protein yjdB	Putative sulfatase	Product confidence : putative conserved putative membrane protein	Putative uncharacterized protein	INTEGRAL MEMBRANE PROTEIN	Putative uncharacterized protein yjdB	Residues 6 to 562 of 562 are 99 pct identical to residues 1 to 557 of a 557 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290747.1 orf, conserved hypothetical protein	Putative membrane protein	Inner membrane protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark inner membrane protein	putative integral membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Inner membrane protein	Putative membrane protein	Hypothetical protein	Evidence 2b : Function of strongly homologous gene; Product type m : membrane component lipid A phosphoethanolamine transferase, associated with polymyxin resistance	Membrane protein, putative	Membrane hydrolase of alkaline phosphatase superfamily	Phosphoethanolamine transferase eptA	inner membrane protein	identified by match to protein family HMM PF00884; match to protein family HMM PF08019 membrane protein, putative	
ECOLI03965	Arginine/agmatine antiporter	Arginine/agmatine antiporter	Amino acid permease family protein	Arginine/agmatine antiporter	Arginine/agmatine antiporter	Residues 1 to 445 of 445 are 100 pct identical to residues 1 to 445 of a 445 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290748.1 putative amino acid-amine transport protein, cryptic	Arginine/agmatine antiporter	Probable amino acid permease	IPR002293: Amino acid/polyamine transporter, family I putative APC family, putrescine/ornithine transport protein, cryptic	similar to Salmonella typhi CT18 putative amino acid permease putative amino acid permease	Putative cationic amino acid permease	Arginine/agmatine antiporter	Code: E; COG: COG0531 putative amino acid/amine transport protein, cryptic	Code: E; COG: COG0531 putative amino acid/amine transport protein, cryptic	Amino acid transporter	Code: E; COG: COG0531 putative amino acid/amine transport protein, cryptic	Putative amino acid permease	Putative amino acid permease	Amino acid transporter protein YjdE	transcript_id=ENSFCAT00000006626	amino acid permease-associated region PFAM: amino acid permease-associated region KEGG: bur:Bcep18194_B0780 amino acid transporter	Amino acid permease	putative amino acid/amine transport protein, cryptic Code: E; COG: COG0531	Amino acid permease	putative amino acid/amine transport protein, cryptic	Amino acid permease-associated region	Putative uncharacterized protein	Arginine/agmatine antiporter	Amino acid permease-associated region	
ECOLI03966	HTH-type transcriptional regulator adiY	Putative AraC family regulatory protein	Putative Regulatory protein adiY	Putative ARAC-type regulatory protein	AraC-type DNA-binding domain-containing protein	Residues 1 to 253 of 253 are 100 pct identical to residues 1 to 253 of a 253 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290749.1 putative ARAC-type regulatory protein	IPR000005: Helix-turn-helix, AraC type transcriptional activator of adiA (AraC/XylS family)	similar to Salmonella typhi CT18 putative AraC family regulatory protein putative AraC family regulatory protein	Transcriptional activator of adiA	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Code: K; COG: COG2207 putative ARAC-type regulatory protein	Putative regulatory protein AdiY	AdiY transcriptional regulatory protein	putative ARAC-type regulatory protein Code: K; COG: COG2207	putative regulatory protein AdiY	Putative uncharacterized protein	Transcriptional regulator AdiY	Transcriptional regulator AdiY	Transcriptional regulator, AraC family	Transcriptional regulator AdiY	Putative uncharacterized protein	Transcriptional regulator AdiY	Putative AraC family regulatory protein	Porin thermoregulatory protein EnvY	Porin thermoregulatory protein EnvY	Porin thermoregulatory protein EnvY	Putative AraC family regulatory protein	Porin thermoregulatory protein EnvY	
ECOLI03967	Biodegradative arginine decarboxylase	Biodegradative arginine decarboxylase	Biodegradative arginine decarboxylase	Residues 1 to 756 of 756 are 99 pct identical to residues 1 to 756 of a 756 aa protein from Escherichia coli K12 ref: NP_418541.1 biodegradative arginine decarboxylase	Putative amino acid decarboxylase	Biodegradative arginine decarboxylase	IPR000310: Orn/Lys/Arg decarboxylase, major region; IPR005308: Orn/Lys/Arg decarboxylase, N-terminal domain; IPR008286: Orn/Lys/Arg decarboxylase, C-terminal arginine decarboxylase, catabolic; inducible by acid	similar to Salmonella typhi CT18 arginine decarboxylase arginine decarboxylase	Probable arginine decarboxylase	Arginine decarboxylase	Code: E; COG: COG1982 biodegradative arginine decarboxylase	Code: E; COG: COG1982 biodegradative arginine decarboxylase	Code: E; COG: COG1982 biodegradative arginine decarboxylase	Response regulator receiver protein	Biodegradative arginine decarboxylase	Putative amino acid decarboxylase	Biodegradative arginine decarboxylase	Lysine decarboxylase PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein KEGG: bur:Bcep18194_B0779 lysine decarboxylase	Amino acid decarboxylase	response regulator receiver protein PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein KEGG: bcn:Bcen_4356 response regulator receiver protein	biodegradative arginine decarboxylase Code: E; COG: COG1982	biodegradative arginine decarboxylase	Orn/Lys/Arg decarboxylase	Lysine decarboxylase	Putative uncharacterized protein	Biodegradative arginine decarboxylase	Lysine decarboxylase	Lysine decarboxylase	Biodegradative arginine decarboxylase	
ECOLI03968	Melibiose operon regulatory protein	Melibiose operon regulatory protein	Lmo2164 protein	Putative AraC-family transcriptional regulator	Melibiose operon regulatory protein	PMID: 2830169 PMID: 1445207 best DB hits: BLAST: gb:AAC24510.1; (AF049243) regulatory protein [Mesorhizobium loti]; E=5e-37 swissprot:P10411; MELR_ECOLI MELIBIOSE OPERON REGULATORY PROTEIN; E=6e-28 ddbj:BAB20427.1; (AB053204) melibiose operon regulatory protein; E=9e-28 COG: melR; COG2207 AraC-type DNA-binding domain-containing proteins; E=6e-29 BS_adaA; COG2169 Adenosine deaminase; E=6e-10 VC1825; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-09 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=1.8e-24 melibiose operon regulatory protein	Transcriptional regulatory protein	Transcriptional regulator, AraC family	Regulator of melibiose operon	regulatory protein	Lin2267 protein	Residues 1 to 302 of 302 are 99 pct identical to residues 1 to 302 of a 302 aa protein from Escherichia coli K12 ref: NP_418542.1 regulator of melibiose operon	Transcription regulator	Transcriptional regulator protein	AraC transcriptional regulator-type	IPR000005: Helix-turn-helix, AraC type regulator of melibiose operon (AraC/XylS family)	similar to Salmonella typhi CT18 melibiose operon regulatory protein melibiose operon regulatory protein	identified by match to protein family HMM PF00165; match to protein family HMM PF02311 transcriptional regulator, AraC family	AraC-type DNA-binding domain-containing proteins AraC protein	Regulator of melibiose operon	Code: K; COG: COG2207 regulator of melibiose operon	similar to gi|16077582|ref|NP_388396.1| [Bacillus subtilis subsp. subtilis str. 168], percent identity 28 in 295 aa, BLASTP E(): 1e-32 putative transcriptional regulator	Code: K; COG: COG2207 regulator of melibiose operon	Melibiose operon regulatory protein	transcriptional regulator, AraC family identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883	MelR regulator of melibiose operon	AraC-like transcriptional regulator (HTH and ligand binding domain)	hypothetical protein Orthologue of BSU05150 Similar to transcriptional regulator (AraC_XylSfamily)	Xylose operon regulator	
ECOLI03969	Alpha-galactosidase	Alpha-galactosidase	Alpha-galactosidase	putative alpha-galactosidase	Alpha-galactosidase	Product confidence : probable Gene name confidence : probable probable alpha-galactosidase (melibiase) protein	Alpha-galactosidase	alpha-galactosidase	Putative alpha-D-galactoside galactohydrolase	Melibiase	SCF11.21, probable alpha-galactosidase, len: 441 aa; similar to SW:AGAL_BACSU (EMBL:AF008220) Bacillus subtilis alpha-galactosidase (EC 3.2.1.22) (Melibiase) MelA, 432 aa; fasta scores: opt: 1068 z-score: 1240.5 E(): 0; 39.3% identity in 427 aa overlap putative alpha-galactosidase	Residues 1 to 451 of 451 are 98 pct identical to residues 1 to 451 of a 451 aa protein from Escherichia coli K12 ref: NP_418543.1 alpha-galactosidase	Alpha-galactosidase (Melibiase) protein	InterProMatches:IPR001088; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolism (GO:0005975) alpha-D-galactoside galactohydrolase, Glycoside Hydrolase Family 4,MelA	melibiase alpha-galactosidase	IPR001088: Glycoside hydrolase, family 4 alpha-galactosidase	similar to Salmonella typhi CT18 alpha-galactosidase alpha-galactosidase	Alpha-galactosidase	Code: G; COG: COG1486 alpha-galactosidase	Code: G; COG: COG1486 alpha-galactosidase	Code: G; COG: COG1486 alpha-galactosidase	putative alpha-galactosidase similarity:fasta; SWALL:AGAL_ECOLI (SWALL:P06720); Escherichia coli; alpha-galactosidase; melA; length 451 aa; 448 aa overlap; query 1-446 aa; subject 1-448 aa similarity:fasta; SWALL:Q989F3 (EMBL:AP003009); Rhizobium loti; alpha-galactosidase; length 461 aa; 456 aa overlap; query 1-456 aa; subject 6-461 aa	alpha-galactosidase (melibiase) protein Similar to mlr6450 [Mesorhizobium loti] and agaL2 (SMb21643) [Sinorhizobium meliloti] Similar to swissprot:Q989F3 Putative location:bacterial cytoplasm Psort-Score: 0.0944; go_function: hydrolase activity, hydrolyzing O-glycosyl compounds [goid 0004553]; go_process: carbohydrate metabolism [goid 0005975]	Alpha-galactosidase	Alpha-galactosidase monomer, subunit of alpha- galactosidase	alpha-galactosidase Code: G; COG: COG1486	Alpha-galactosidase	alpha-galactosidase, NAD(P)-binding	Glycoside hydrolase family 4	
ECOLI03970	Melibiose carrier protein	Na+/melibiose symporter	Melibiose carrier protein	putative melibiose permease II	Melibiose permease II	Sugar transporter	Na+/melibiose symporter	Residues 13 to 481 of 481 are 99 pct identical to residues 1 to 469 of a 469 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290753.1 melibiose permease II	sodium:beta-glucoside symporter	lactose permease	GPH family, melibiose permease II	similar to Salmonella typhi CT18 melibiose carrier protein melibiose carrier protein	Na+/melibiose symporter and related transporters MelB protein	lactose permease	Melibiose carrier protein	similar to gi|2462705|emb|CAA74936.1| [Staphylococcus xylosus], percent identity 88 in 462 aa, BLASTP E(): 0.0 lactose permease	Galactose:cation symporter	Uncharacterized MFS-type transporter C19orf28 [Source:UniProtKB/Swiss-Prot;Acc:Q6NUT3]	transcript_id=ENSGACT00000019402	Lactose permease	Na+/xyloside symporter related transporter	Na+/xyloside symporter or related transporter	galactoside symporter COG family: Na+_melibiose symporter andrelated transporters Orthologue of BL0976	Galactose permease	melibiose permease II Code: G; COG: COG2211	Na+/xyloside symporter related transporter	Na+/xyloside symporter related transporter	Melibiose permease II	Major facilitator superfamily MFS_1	
ECOLI03971	Inner membrane protein yjdF	Putative uncharacterized protein	Putative uncharacterized protein	PMID: 11248100 best DB hits: BLAST: gb:AAK03963.1; (AE006225) unknown [Pasteurella multocida]; E=2e-13 pir:A82416; conserved hypothetical protein VCA0789 [imported] -; E=1e-12 swissprot:P39270; YJDF_ECOLI HYPOTHETICAL 23.4 KD PROTEIN IN; E=1e-07 PFAM: PF02177; Amyloid A4 extracellular domain; E=0.63 conserved hypothetical protein-putative membrane protein	Putative sodium-glucose/galactose cotransporter	hypothetical conserved protein	Putative uncharacterized protein yjdF	Residues 1 to 209 of 209 are 97 pct identical to residues 1 to 209 of a 209 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290754.1 orf, conserved hypothetical protein	putative membrane protein	conserved hypothetical protein	Code: S; COG: COG3647 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function; Product type m : membrane component conserved protein of unknown function ; putative inner membrane protein	Code: S; COG: COG3647 conserved hypothetical protein	predicted membrane protein COG3647	Putative uncharacterized protein	Hypothetical protein	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein yjdF	hypothetical membrane protein	conserved hypothetical protein	Hypothetical protein precursor	Conserved Hypothetical protein Hypothetical protein yjdF,44% identity (56% similarity) to TrEMBL;Q8XDT2. SwissProt;P39270. Signal P reporting Signal peptide present. TMHMM2 reporting 3 TMH's present.	inner membrane protein YjdF	conserved hypothetical protein KEGG: ade:Adeh_3999 hypothetical protein	conserved hypothetical protein KEGG: she:Shewmr4_0719 hypothetical protein	Hypothetical protein	conserved hypothetical protein KEGG: son:SO0863 hypothetical protein	
ECOLI03972	Fumarate hydratase class I, anaerobic	Fumarate hydratase class I	Fumarate hydratase class I, anaerobic	Fumarase B	Residues 1 to 548 of 548 are 99 pct identical to residues 1 to 548 of a 548 aa protein from Escherichia coli K12 ref: NP_418546.1 fumarase B= fumarate hydratase Class I; anaerobic isozyme	IPR000362: Fumarate lyase; IPR004646: Fe-S type hydro-lyases tartrate/fumarate alpha region; IPR004647: Fe-S type hydro-lyases tartrate/fumarate beta region fumarase B (fumarate hydratase class I), anaerobic isozyme	similar to Salmonella typhi CT18 fumarate hydratase class I fumarate hydratase class I	Fumarase B	fumarate hydratase Class I; anaerobic isozyme; Code: C; COG: COG1951 fumarase B	fumarate hydratase Class I; anaerobic isozyme; Code: C; COG: COG1951 fumarase B	fumarate hydratase Class I; anaerobic isozyme; Code: C; COG: COG1951 fumarase B	Fumarate hydratase class I, anaerobic	Fumarate hydratase class I, anaerobic	fumarate hydratase, putative	Fumarate hydratase class I, anaerobic Code: C; COG: COG1951	anaerobic class I fumarate hydratase (fumarase B)	fumarate hydratase, class I	Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit	Fumarase B (Fumarate hydratase class I), anaerobic isozyme	Putative uncharacterized protein	Fumarate hydratase	Anaerobic class I fumarate hydratase	Fumarate hydratase	Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit	Fumarate hydratase class I, anaerobic	Putative uncharacterized protein	Putative uncharacterized protein	Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit	Fumarate hydratase class I	
ECOLI03973	Anaerobic C4-dicarboxylate transporter dcuB	Putative uncharacterized protein	Anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter	Probable DcuB	putative anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter dcuB	C4-dicarboxylate transporter, anaerobic	Anaerobic C4-dicarboxylate membrane transporter	Anaerobic C4-dicarboxylate transporter	C4-DICARBOXYLATE MEMBRANE TRANSPORTER	Anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter dcuB	Anaerobic C4-dicarboxylate transporter	Residues 1 to 446 of 446 are 100 pct identical to residues 1 to 446 of a 446 aa protein from Escherichia coli O157:H7 ref: NP_313132.1 anaerobic C4-dicarboxylate transport protein	Anaerobic C4-dicarboxylate membrane transporter protein	identified by similarity to SP:P14409; match to protein family HMM PF03605; match to protein family HMM TIGR00770 anaerobic C4-dicarboxylate membrane transporter DcuB	IPR004668: Anaerobic c4-dicarboxylate membrane transporter Dcu family, anaerobic C4-dicarboxylate transporter	similar to Salmonella typhi CT18 anaerobic C4-dicarboxylate transporter anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter DcuA	Putative Dcu family, anaerobic C4-dicarboxylate transporter	anaerobic C4-dicarboxylate transporter	Similar to: HI0746, DCUB_ECOLI anaerobic C4-dicarboxylate transporter DcuB	Anaerobic C4-dicarboxylate transporter DcuB protein	Dcu family anaerobic C4-dicarboxylate transporter	anaerobic C4-dicarboxylate membrane transporter	Anaerobic c4-dicarboxylate membrane transporter	
ECOLI03974	Transcriptional regulatory protein dcuR	Two-component response regulator	Response regulator	Two-component response regulator	Response regulator	Two-component response regulator yufM	Response regulator	Transcriptional regulatory protein dcuR	identified by match to protein family HMM PF00072 response regulator	Two-component response regulator	Transcriptional regulatory protein	Putative two-component response regulator	Transcriptional regulatory protein dcuR	CDS_ID OB3219 truncated two-component response regulator	Two-component response regulator	SC5B8.18c, probable two-component transcriptional regulator, len: 226 aa; similar to many e.g. CITB_KLEPN P5268 8 transcriptional regulator from klebsiella pneumoniae (23 4 aa), fasta scores; opt: 319 z-score: 394.9 E(): 8.3e-15, 30.8% identity in 224 aa overlap.  Contains Pfam match to entry response_reg PF00072, Response regulator receiver domain, score 117.43 and probable helix-turn-helix from aa 176- 197 (Score 2073, +6.25 SD) putative two-component transcriptional regulator	Residues 1 to 228 of 228 are 99 pct identical to residues 12 to 239 of a 239 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290757.1 putative 2-component transcriptional regulator	Transcriptional regulatory protein DpiA	hypothetical conserved protein	IPR001789: Response regulator receiver response regulator in two-component regulatory system with DcuS, regulates anaerobic fumarate respiration	similar to Salmonella typhi CT18 two-component response regulator two-component response regulator	Putative uncharacterized protein gbs1909	identified by match to PFAM protein family HMM PF00072 response regulator	Putative two-component response regulator	best blastp match gb|AAK33984.1| (AE006553) putative two-component response regulator [Streptococcus pyogenes M1 GAS] putative two-component response regulator	Response regulator in two-component regulatory system with DcuS	response regulator	identified by match to protein family HMM PF00072 response regulator	transcriptional regulatory protein	
ECOLI03975	Sensor protein dcuS	Two-component sensor histidine kinase	Sensory box histidine kinase	Two-component sensor kinase	Sensory box histidine kinase	Two-component sensor kinase yufL	Sensor histidine kinase	Sensor protein dcuS	identified by match to protein family HMM PF02518; match to protein family HMM TIGR00229 sensory box histidine kinase	Two-component sensor kinase	Sensor kinase dpiB	Sensor protein dcuS	CDS_ID OB3220 two-component sensor histidine kinase	similar to AL022374-19|CAA18527.1| percent identity: 34 in 546 aa putative sensor kinase	Two-component system, sensor protein	Two-component sensor histidine kinase	SC5B8.19c, probable two-component sensor, len: 566 aa; similar to many e.g. CITA_KLEPN P52687 klebsiella pneumoniae sensor kinase (547 aa), fasta scores; opt: 604 z-score: 460.1 E(): 2e-18, 27.1% identity in 554 aa overlap. Contains Pfam match to entry signal PF00512, Signal C terminal domain, score 98.50. Contains possible hydrophobic membrane spanning regions putative two-component sensor	Residues 1 to 543 of 543 are 99 pct identical to residues 1 to 543 of a 543 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290758.1 putative 2-component sensor protein	Sensor kinase DpiB	Biological Process: signal transduction (GO:0007165), Molecular Function: kinase activity (GO:0016301) putative Histidine kinase	two-component sensor histidine kinase	IPR004358: Bacterial sensor protein, C-terminal; IPR005467: Histidine kinase sensory histidine kinase in two-component retgulatory system with DcuR, senses fumarate/C4-dicarboxylate	Putative uncharacterized protein gbs1908	similar to OMNI:NTL01SPL0863; identified by sequence similarity; putative sensor histidine kinase	Putative two-component sensor histidine kinase	best blastp match gb|AAK33985.1| (AE006553) putative two-component sensor histidine kinase [Streptococcus pyogenes M1 GAS] putative two-component sensor histidine kinase	Sensory histidine kinase in two-component retgulatory system with DcuR	sensor histidine kinase	sensor histidine kinase, putative	
ECOLI03976	Uncharacterized protein yjdI	Lmo0133 protein	Hypothetical protein yjdI	Uncharacterized protein yjdI	Lin0180 protein	Putative uncharacterized protein ygiH	conserved hypothetical protein	Code: S; COG: COG3592 conserved hypothetical protein	Code: S; COG: COG3592 conserved hypothetical protein	Code: S; COG: COG3592; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjdI	conserved hypothetical protein	hypothetical protein	Complete genome	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI03977	Uncharacterized protein yjdJ	Lmo0134 protein	Hypothetical protein yjdJ	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Putative uncharacterized protein yjdJ	CDS_ID OB0847 hypothetical protein	hypothetical protein	Lin0181 protein	Putative uncharacterized protein	Acetyltransferase	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	Hypothetical protein SE2069	conserved hypothetical protein	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR2601 acetyltransferase (GNAT) family protein	conserved hypothetical protein	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	Evidence 4 : Homolgs of previously reported genes of unknown function conserved hypothetical protein	similar to unknown protein	Similar to Escherichia coli hypothetical protein YjdJ SW:YJDJ_ECOLI (P39274) (90 aa) fasta scores: E(): 3.7e-11, 45.45% id in 88 aa, and to Lactococcus lactis YjdJ-like protein TR:O69438 (EMBL:Y13384) (105 aa) fasta scores: E(): 4.3e-06, 39.32% id in 89 aa acetyltransferase (GNAT) family protein	Code: R; COG: COG2388 conserved hypothetical protein	acetyltransferase, GNAT family	similar to gi|27468987|ref|NP_765624.1| [Staphylococcus epidermidis ATCC 12228], percent identity 65 in 91 aa, BLASTP E(): 3e-31 putative acetyltransferase	Code: R; COG: COG2388 conserved hypothetical protein	acetyltransferase family protein	conserved hypothetical protein	Code: R; COG: COG2388; orf conserved hypothetical protein	conserved hypothetical protein similarity:fasta; with=UniProt:Q92MB2_RHIME (EMBL:SME591791); Rhizobium meliloti (Sinorhizobium meliloti).; Hypothetical protein SMc00656. Hypothetical protein SMc00656.; length=93; id 69.231; 91 aa overlap; query 1-91; subject 1-91	Putative uncharacterized protein	
ECOLI03978	Uncharacterized protein yjdK	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjdK	conserved hypothetical protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjdK	Putative uncharacterized protein yjdK	Putative uncharacterized protein yjdK	Putative uncharacterized protein yjdK	Putative uncharacterized protein yjdK	Predicted protein	Putative uncharacterized protein yjdK	YjdK protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI03979	Uncharacterized protein yjdO	Uncharacterized protein yjdO	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjdO	Putative uncharacterized protein yjdO	Putative uncharacterized protein yjdO	Putative uncharacterized protein yjdO	Putative uncharacterized protein yjdO	YjdO protein	Predicted protein	Predicted protein	Uncharacterized protein YjdO	
ECOLI03980	Lysyl-tRNA synthetase, heat inducible	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase, heat inducible	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase, heat inducible	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	lysyl-tRNA synthetase type II	Similar to Escherichia coli, and Escherichia coli O157:H7 lysyl-tRNA synthetase, heat inducible LysU or B4129 or Z5732 or ECS5111 SWALL:SYK2_ECOLI (SWALL:P14825) (504 aa) fasta scores: E(): 1.9e-77, 47.59% id in 498 aa, and to Porphyromonas gingivalis W83 lysyl-tRNA synthetase LysS or PG1370 SWALL:AAQ66434 (EMBL:AE017176) (578 aa) fasta scores: E(): 4.7e-167, 72.02% id in 572 aa putative lysyl-tRNA synthetase, heat inducible	heat shock protein; Code: J; COG: COG1190 lysine tRNA synthetase, inducible	Lysyl-tRNA synthetase, class-2	lysyl-tRNA synthetase	lysyl-tRNA synthetase identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499	Lysyl-tRNA synthetase, class-2	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	lysyl-tRNA synthetase	lysyl-tRNA synthetase identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499	lysyl-tRNA synthetase identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499	lysyl-tRNA synthetase 1 Catalyzes a two-step reaction_ first charging alysine molecule by linking its carboxyl group to thealpha-phosphate of ATP_ followed by transfer of theaminoacyl-adenylate to its tRNA Orthologue of BL1654	lysyl-tRNA synthetase TIGRFAM: lysyl-tRNA synthetase PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type KEGG: mmc:Mmcs_4758 lysyl-tRNA synthetase	lysyl-tRNA synthetase TIGRFAM: lysyl-tRNA synthetase PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type KEGG: son:SO0992 lysyl-tRNA synthetase	
ECOLI03981	Inner membrane transporter yjdL	DEHA2C12210p;highly similar to uniprot|P32901 Saccharomyces cerevisiae YKR093W PTR2 Functions in transport of small peptides into the cell;	Putative transmembrane transport protein	Hypothetical transporter yjdL	Putative peptide transporter	similar to AL596165-116|CAC95796.1| percent identity: 32 in 474 aa putative peptide transporter	IPR000109: TGF-beta receptor, type I/II extracellular region; IPR001092: Basic helix-loop-helix dimerization domain bHLH; IPR007114: Major facilitator superfamily putative POT family, di-/tripeptide transport protein	similar to Salmonella typhi CT18 putative transmembrane transport protein putative transmembrane transport protein	Putative POT family, di-/tripeptide transport protein	Code: E; COG: COG3104 putative peptide transporter	Code: E; COG: COG3104 putative peptide transporter	Putative POT family, di-/tripeptide transport protein	Hypothetical transporter YjdL	putative peptide transporter	Putative di-/tripeptide transport protein	Putative uncharacterized protein	Amino acid/peptide transporter	Amino acid/peptide transporter	Predicted transporter	Amino acid/peptide transporter	Amino acid/peptide transporter	Amino acid/peptide transporter	Putative uncharacterized protein	Putative transmembrane transport protein	Inner membrane transporter YbgH	Inner membrane transporter YbgH	Inner membrane transporter YbgH	
ECOLI03982	Lysine decarboxylase, inducible	Lysine decarboxylase	Lysine decarboxylase, inducible	Lysine decarboxylase, inducible	Lysine decarboxylase, inducible	Lysine decarboxylase	Lysine decarboxylase, inducible	Lysine decarboxylase	IPR000310: Orn/Lys/Arg decarboxylase, major region; IPR005308: Orn/Lys/Arg decarboxylase, N-terminal domain; IPR008286: Orn/Lys/Arg decarboxylase, C-terminal lysine decarboxylase 1	similar to Salmonella typhi CT18 lysine decarboxylase lysine decarboxylase	lysine decarboxylase	Similar to DCLY_ECOLI (P23892) Lysine decarboxylase, inducible from E. coli (715 aa) FASTA: opt: 2608 Z-score: 3095.0 E(): 1.7e-164 Smith-Waterman score: 2608; 53.912 identity in 703 aa overlap lysine decarboxylase, inducable	Lysine decarboxylase, inducible	Lysine decarboxylase, inducible	lysine decarboxylase, inducable Similar to DCLY_ECOLI (P23892) Lysine decarboxylase, inducible from E. coli (715 aa) FASTA: opt: 2608 Z-score: 3095.0 E(): 1.7e-164 Smith-Waterman score: 2608; 53.912 identity in 703 aa overlap	CadA, subunit of lysine decarboxylase	Lysine decarboxylase	lysine decarboxylase, constitutive identified by match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711	Lysine decarboxylase, inducible	Lysine decarboxylase	lysine decarboxylase, inducable	lysine decarboxylase	Lys decarboxylase	lysine decarboxylase 1	Arginine decarboxylase	Orn/Lys/Arg decarboxylase	Lysine decarboxylase 1	Putative uncharacterized protein	Lysine decarboxylase homolog, constitutive	
ECOLI03983	Probable cadaverine/lysine antiporter	Dimethylamine permease	Cationic amino acid transporter related protein	Probable integral membrane transport protein	Amino acid permease	Cadaverine/lysine antiporter	Probable cadaverine/lysine antiporter	Amino acid permease family protein	Probable cadaverine/lysine antiporter	Cadaverine/lysine antiporter CadB, putative	Putrescine-ornithine antiporter	Lysine/cadaverine antiporter	Probable cadaverine/lysine antiporter	Cadaverine/lysine antiporter	Residues 1 to 350 of 350 are 99 pct identical to residues 1 to 350 of a 444 aa protein from Escherichia coli O157:H7 ref: NP_313141.1 transport protein of lysine-cadaverine	IPR002293: Amino acid/polyamine transporter, family I APC family, lysine/cadaverine transport protein	Amino acid transporter	similar to Salmonella typhi CT18 probable cadaverine/lysine antiporter probable cadaverine/lysine antiporter	APC family lysine/cadaverine transport protein	Putrescine-ornithine antiporter	Phospholipid binding protein	Putrescine-ornithine antiporter	amino acid transporter	Putative amino acid permease	Amino acid permease-associated region	Probable cadaverine/lysine antiporter	transcript_id=ENSFCAT00000013738	putative cadaverine:lysine antiporter identified by similarity to SP:P0AAE8; match to protein family HMM PF00324	Cadaverine/lysine antiporter	
ECOLI03984	Transcriptional activator cadC	Transcriptional activator CadC	Transcriptional activator cadC	Transcriptional activator CadC, putative	Putative transcriptional activator CadC	Transcriptional activator of cad operon	Transcriptional regulator CadC	IPR001440: TPR repeat; IPR001867: Transcriptional regulatory protein, C terminal transcriptional activator of cad operon (OmpR family)	transcriptional activator CadC	Transcriptional activator of cad operon	Transcriptional activator CadC	Transcriptional activator CadC	transcriptional activator CadC identified by match to protein family HMM PF00486	Transcriptional activator CadC	transcriptional activator CadC	Transcriptional activator of cad operon	Putative uncharacterized protein	Transcriptional activator CadC	Transcriptional regulator, CadC	DNA-binding transcriptional activator	Transcriptional activator CadC	Transcriptional regulator, CadC	Transcriptional activator CadC	Putative transcriptional activator CadC	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	Transcriptional activator CadC	Transcriptional activator CadC	
ECOLI03986	HTH-type transcriptional regulator yjdC	hypothetical protein	Putative HTH-type transcriptional regulator yjdC	Putative uncharacterized protein	Putative uncharacterized protein yjdC	SC7H9.14, probable tetR-family transcriptional regulator, len: 195 aa; similar to TR:O53323 (EMBL:AL021646) Mycobacterium tuberculosis putative regulatory protein MTV014.17c, 200 aa; fasta scores: opt: 319 z-score: 395.7 E(): 1.7e-14; 33.3% identity in 195 aa overlap. Contains Pfam match to entry PF00440 tetR, Bacterial regulatory proteins, tetR family. Also contains possible helix-turn-helix motif at residues 36..57 (+3.70 SD) putative tetR-family transcriptional regulator	Residues 1 to 191 of 191 are 100 pct identical to residues 9 to 199 of a 199 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290768.1 orf, conserved hypothetical protein	Putative TetR-family regulatory protein	Similar to putative TetR-family regulatory protein YjdC of Escherichia coli	putative bacterial regulatory protein, merR family	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Putative TetR-family regulatory protein	transcriptional regulator, TetR family	Putative merR family bacterial regulatory protein	regulatory protein, TetR	Code: K; COG: COG1309 conserved hypothetical protein	Code: K; COG: COG1309 conserved hypothetical protein	putative transcriptional regulator	Transcriptional regulator COG1309	Code: K; COG: COG1309; orf conserved hypothetical protein	Protein YjdC	Putative TetR-family regulatory protein	Putative uncharacterized protein yjdC	TetR-family regulatory protein	Putative TetR-family regulatory protein	Putative Transcriptional regulatory protein, TetR family	conserved hypothetical protein Code: K; COG: COG1309	TetR-family regulatory protein	transcriptional regulator of TetR family protein PFAM: regulatory protein, TetR KEGG: pae:PA3034 probable transcriptional regulator	
ECOLI03987	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein DsbD	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein dsbD precursor	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein DsbD	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein DsbD	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein	Thiol:disulfide interchange protein DsbD, putative	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein dsbD	Residues 1 to 565 of 565 are 99 pct identical to residues 1 to 565 of a 565 aa protein from Escherichia coli K12 ref: NP_418559.1 thiol:disulfide interchange protein; copper tolerance	Thiol:disulfide interchange protein dsbD	Thioredoxin:Cytochrome c biogenesis protein transmembrane region	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein dsbD	Thiol:disulfide interchange protein DsbD	identified by similarity to SP:P36655; match to protein family HMM PF02683 thiol:disulfide interchange protein DsbD	IPR006662: Thioredoxin type domain; IPR006663: Thioredoxin domain 2 thiol:disulfide interchange protein, cytochrome c-type biogenesis	similar to Salmonella typhi CT18 thiol:disulfide interchange protein DsbD thiol:disulfide interchange protein DsbD	
ECOLI03988	Divalent-cation tolerance protein cutA	Periplasmic divalent cation tolerance protein	Divalent cation tolerance protein, conjectural	Periplasmic divalent cation tolerance protein	Divalent cation tolerance protein	Periplasmic divalent cation tolerance protein	similarity to E. COLI PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN CUTA;04_1360, similarity to E. COLI PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN CUTA, CUTA_ECOLI, gene found by Glimmer [Delay by 63 153 47 12];	CutA homolog	Divalent-cation tolerance protein cutA	Divalent cation tolerance protein	Uncharacterized protein implicated in tolerance to divalent cations	Divalent-cation tolerance protein cutA	Periplasmic divalent cation tolerance protein	Periplasmic divalent cation tolerance protein CutA	Periplasmic divalent cation tolerance protein	Putative divalent cation tolerance protein	C type cytochrome biogenesis protein cycY	Divalent cation tolerance protein	hypothetical periplasmic divalent cation tolerance protein	Divalent-cation tolerance protein cutA	Uncharacterized protein	Periplasmic divalent cation tolerance protein	Divalent cation tolerance protein	Divalent cation tolerance protein	Divalent-cation tolerance protein cutA	Putative periplasmic cytochrome biogenesis protein	Periplasmic divalent cation tolerance protein	Divalent cation tolerance protein	
ECOLI03989	Anaerobic C4-dicarboxylate transporter dcuA	Anaerobic C4-dicarboxylate transporter	Probable anaerobic C4-dicarboxylate transporter	putative Anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter dcuA	C4-dicarboxylate transporter, anaerobic	Anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter dcuA	C4-dicarboxylate transporter	C4-dicarboxylate transporter, anaerobic	Anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter dcuA	Anaerobic C4-dicarboxylate transporter	Residues 1 to 433 of 433 are 100 pct identical to residues 1 to 433 of a 433 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290771.1 anaerobic dicarboxylate transport	Anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter DcuA	Anaerobic C4-dicarboxylate membrane transporter protein	IPR004668: Anaerobic c4-dicarboxylate membrane transporter Dcu family, anaerobic dicarboxylate transport protein	similar to Salmonella typhi CT18 anaerobic C4-dicarboxylate transporter anaerobic C4-dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter	anaerobic C4-dicarboxylate transporter	Dcu family anaerobic dicarboxylate transport protein	Code: R; COG: COG2704 anaerobic dicarboxylate transport	Code: R; COG: COG2704 anaerobic dicarboxylate transport	Code: R; COG: COG2704 anaerobic dicarboxylate transport	Anaerobic C4-dicarboxylate transporter DcuA	Anaerobic C4-dicarboxylate transporter	DcuA dicarboxylate transporter	Anaerobic C4-dicarboxylate transporter	
ECOLI03990	Aspartate ammonia-lyase	Fumarase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	Probable fumarase	Fumarate hydratase	Aspartate ammonia-lyase	AspA	Aspartate ammonia-lyase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	Probable apartate ammonia-lyase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	putative aspartate ammonia-lyase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	similar to SP:P04422; identified by sequence similarity; putative aspartate ammonia-lyase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	Aspartate ammonia-lyase, aspartase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	Aspartate ammonia-lyase	ASPARTATE AMMONIA-LYASE	Aspartate ammonia-lyase	
ECOLI03991	UPF0716 protein fxsA	FxsA protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein affecting phage T7 exclusion by the F plasmid	FxsA protein	Putative fxsA cytoplasmic membrane protein	FxsA protein	Cytoplasmic membrane protein	putative FxsA protein	Putative uncharacterized protein	FxsA protein	identified by match to protein family HMM PF04186 fxsA cytoplasmic membrane protein, putative	FxsA protein	FxsA protein	Suppressor of F plamsid exlusion of phage T7	Cytoplasmic membrane family protein	Putative uncharacterized protein	FxsA protein	Putative uncharacterized protein	CDS_ID OB2170 hypothetical protein	hypothetical protein	Protein affecting phage T7 exclusion by the F plasmid	Residues 1 to 158 of 158 are 99 pct identical to residues 1 to 158 of a 158 aa protein from Escherichia coli O157:H7 ref: NP_313148.1 suppressor of F exclusion of bacteriophage T7	Putative membrane protein	FxsA protein	identified by similarity to SP:P37147; match to protein family HMM PF04186 FxsA	Putative uncharacterized protein	Cellular Component: membrane (GO:0016020) conserved membrane protein YtzA	
ECOLI03992	Inner membrane protein yjeH	Amino acid transporter	Putative permease	Amino acid permease	Putative amino acid permease	hypothetical transport	Hypothetical protein yjeH	identified by match to protein family HMM PF00324 transporter, putative	Putative uncharacterized protein VCA0847	Transporter, putative	Probable transport protein	Amino acid permease	Putative uncharacterized protein VPA1236	Putative transport	Amino acid transporter	Residues 21 to 438 of 438 are 98 pct identical to residues 1 to 418 of a 418 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290774.1 putative transport	Putative permease	probable amino acid permease; Molecular Function: amino acid-polyamine transporter activity (GO:0005279), Biological Process: amino acid transport (GO:0006865), Cellular Component: membrane (GO:0016020) probable amino acid permease YecA	IPR002293: Amino acid/polyamine transporter, family I; IPR004841: Amino acid permease-associated region putative transporter, cytoplasmic membrane protein	similar to Salmonella typhi CT18 putative permease putative permease	Putative APC family amino acid permease	Putative transporter	amino acid permease	Code: E; COG: COG0531 putative transport	Code: E; COG: COG0531 putative transport	putative amino acid transporter	Amino acid transporters COG0531	Code: E; COG: COG0531 putative transport	Amino acid permease-associated region	
ECOLI03993	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	highly similar to uniprot|P38910 Saccharomyces cerevisiae YOR020c HSP10;	similar to GB:X77366, GB:U08853, PID:520471,  and PID:541678; identified by sequence similarity; putative 10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin 1	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	10 kDa chaperonin	putative Co-chaperonin GroES	10 kDa chaperonin	10 kDa chaperonin	
ECOLI03994	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	similar to GB:X54079, GB:Z23090, GB:S74571, GB:L39370, GB:X16477, SP:P04792, PID:32476, PID:35182, PID:662841, GB:X54079, GB:Z23090, GB:S74571, GB:L39370, GB:X16477, SP:P04792, PID:32476, PID:35182, PID:662841, GB:X54079, GB:Z23090, GB:S74571, GB:L39370, GB:X16477, SP:P04792, PID:32476, PID:35182,  and PID:662841; identified by sequence similarity; putative 60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin 1	60 kDa chaperonin 2	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin 1	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin	60 kDa chaperonin 2	60 kDa chaperonin 2	60 kDa chaperonin	putative chaperonin GroEL	
ECOLI03995	Uncharacterized protein yjeI	Putative membrane protein	Hypothetical protein yjeI precursor	Putative lipoprotein	Putative uncharacterized protein yjeI	Outermembrane lipoprotein	Residues 4 to 131 of 131 are 99 pct identical to residues 1 to 128 of a 128 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290777.1 orf, conserved hypothetical protein	Putative lipoprotein	Similar to putative lipoprotein YjeI of Escherichia coli	putative outer membrane lipoprotein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative lipoprotein	Putative outer membrane lipoprotein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative lipoprotein precursor	Putative uncharacterized protein yjeI	Lipoprotein precursor	Putative lipoprotein precursor	conserved hypothetical protein	Lipoprotein precursor	conserved hypothetical protein	Putative outer membrane lipoprotein precursor	Putative uncharacterized protein yjeI	Putative uncharacterized protein	Putative lipoprotein	
ECOLI03996	Uncharacterized protein yjeJ	Hypothetical protein yjeJ	Putative uncharacterized protein yjeJ	Residues 1 to 252 of 252 are 99 pct identical to residues 38 to 289 of a 289 aa protein from Escherichia coli K12 ref: NP_418569.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 hypothetical protein hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjeJ	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein yjeJ	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative uncharacterized protein yjeJ	Putative uncharacterized protein	
ECOLI03997	Uncharacterized kamA family protein yjeK	Lysine 2,3-aminomutase	Lysine 2,3-aminomutase	L-lysine 2,3-aminomutase	Putative uncharacterized protein	Lysine 2,3-aminomutase	Putative uncharacterized protein	Uncharacterized kamA family protein HI0329	Lysine 2,3-aminomutase	L-lysine 2,3-aminomutase, putative	Putative uncharacterized protein	Putative uncharacterized protein	Lysine 2;3-aminomutase	Putative uncharacterized protein	L-lysine 2,3-aminomutase	Putative uncharacterized protein yjeK	L-lysine 2,3-aminomutase	Lysine 2,3-aminomutase	Lysine 2,3-aminomutase	conserved hypothetical protein	Lysine 2,3-aminomutase	Hypothetical protein yjeK	identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238 L-lysine 2,3-aminomutase	Putative uncharacterized protein	Uncharacterized kamA family protein TP_0121	Putative uncharacterized protein	Lysine 2,3-aminomutase	best DB hits: BLAST: pir:C82554; conserved hypothetical protein XF2474 [imported] -; E=7e-72 gb:AAG59345.1; AE005648_7 (AE005648) orf, hypothetical protein; E=4e-70 swissprot:P39280; YJEK_ECOLI HYPOTHETICAL 38.7 KD PROTEIN IN; E=1e-67 COG: XF2474; COG1509 Lysine 2,3-aminomutase; E=7e-73 PFAM: PF02587; Uncharacterized ACR, YjeK family COG; E=6e-109 L-lysine 2,3-aminomutase	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	
ECOLI03998	Elongation factor P	Elongation factor P	Elongation factor P 2	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L46362, GB:L48713, GB:L48715, GB:L48716, SP:P07902, PID:1066737, PID:1066749, PID:1066751, PID:1066753, PID:182951, PID:306759, PID:950351, PID:950353, PID:950355, PID:950357, PID:950365, PID:950367, PID:950369, PID:950377, PID:950381, PID:950383, PID:950391, PID:950393, PID:950395, PID:950397, PID:950399, PID:950401, PID:950403,  and PID:950405; identified by sequence similarity; putative translation elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	Elongation factor P	putative elongation factor P	
ECOLI04002	Outer membrane lipoprotein blc	DEHA2F00176p;similar to uniprot|Q6F9D3 Acinetobacter sp ACIAD2568;	Outer membrane lipoprotein Blc	Outer membrane lipoprotein Blc	Outer membrane lipoprotein Blc	Blc protein homolog	Bacterial lipocalin	Putative lipoprotein	Probable outer membrane lipoprotein Blc	Outer membrane lipoprotein blc	Outer membrane lipoprotein	Lipoprotein Blc	Outer membrane lipoprotein	Outer membrane lipoprotein	probable outer membrane lipoprotein	Lipoprotein Blc	Outer membrane lipoprotein blc	Bacterial lipocalin	Residues 1 to 177 of 177 are 99 pct identical to residues 1 to 177 of a 177 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290784.1 outer membrane lipoprotein (lipocalin)	Outer membrane lipoprotein, lipocalin	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark outer membrane lipoprotein Blc	similar to Salmonella typhi CT18 putative lipoprotein putative lipoprotein	Outer membrane lipoprotein Blc	outer membrane lipoprotein Blc	Outer membrane lipoprotein Blc, putative	Similar to Q8EGB4 Lipoprotein Blc from Shewenella oneidensis (177 aa). FASTA: opt: 620 Z-score: 813.1 E(): 2.1e-37 Smith-Waterman score: 620; 56.604 identity in 159 aa overlap outer membrane lipoprotein	lipocalin Outer membrane lipoprotein	Outer membrane lipoprotein	outer membrane lipoprotein Blc	
ECOLI04001	Quaternary ammonium compound-resistance protein sugE	SugE protein	SugE protein	SugE protein	Putative SMR-type multi-drug efflux transporter	SugE protein	Probable transporter	Putative efflux protein	SugE protein	Quaternary ammonium compound-resistance protein sugE	Lmo0853 protein	Putative chaperone	SugE protein	Molecular chaperone sugE	Quaternary ammonium compound-resistance protein sugE	identified by match to protein family HMM PF00893 sugE protein	SugE protein	SugE protein	Putative molecular chaperone	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE CHAPERONE HOMOLOGUE TRANSMEMBRANE PROTEIN	hypothetical protein	chaperone protein	Putative transporter	SugE protein	Molecular chaperone SugE	Quaternary ammonium compound-resistance protein sugE	CDS_ID OB3264 chaperonin	molecular chaperone, SugES homolog	SugE homolog, probable drug efflux protein	
ECOLI04003	Beta-lactamase	Beta-lactamase-like protein	Beta-lactamase	Beta-lactamase	Putative uncharacterized protein	Penicillin-binding protein	Penicillin-binding protein	Beta-lactamase	Beta-lactamase	PMID: 9324260 best DB hits: BLAST: pir:T35155; hypothetical protein SC5A7.06c SC5A7.06c - Streptomyces; E=2e-36 gb:AAF26905.1; AF210843_2 (AF210843) unknown [Sorangium; E=9e-34 swissprot:Q11037; YD67_MYCTU HYPOTHETICAL 41.3 KDA PROTEIN RV1367C; E=4e-31 COG: Rv1367c; COG1680 Beta-lactamase class C and other penicillin binding; E=3e-32 conserved hypothetical protein-putative beta-lactamase or penicillin-binding protein	Product confidence : putative putative exported beta-lactamase protein	Beta-lactamase	Beta-lactamase; penicillin resistance protein	Residues 12 to 388 of 388 are 98 pct identical to residues 1 to 377 of a 377 aa protein from Escherichia coli K12 ref: NP_418574.1 beta-lactamase; penicillin resistance	Protein flp	Beta-lactamase class C	conserved gene AMPC cephalosporinase	Beta-lactamase	Beta-lactamase	Beta-lactamase protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark beta-lactamase	IPR001466: beta-lactamase; IPR001586: beta-lactamase, class C active site extended spectrum beta-lactamase	Beta-lactamase	hypothetical protein, similar to beta-lactamase	Ortholog of S. aureus MRSA252 (BX571856) SAR2531 putative exported protein	hypothetical protein, similar to beta-lactamase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme beta-lactamase class C	penicillin-binding protein	Beta-lactamase	
ECOLI04004	Fumarate reductase subunit D	Fumarate reductase subunit D	Fumarate reductase subunit D	Fumarate reductase subunit D	putative fumarate reductase	Fumarate reductase subunit D	Fumarate reductase subunit D	Fumarate reductase subunit D	Fumarate reductase subunit D	Fumarate reductase subunit D	Fumarate reductase subunit D	Residues 11 to 129 of 129 are 100 pct identical to residues 1 to 119 of a 119 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290786.1 fumarate reductase, anaerobic, membrane anchor polypeptide	Fumarate reductase subunit D	Fumarate reductase 13 kDa hydrophobic protein	Fumarate reductase, subunit D	Fumarate reductase subunit D	Mb1580, frdD, len: 125 aa. Equivalent to Rv1555, len: 125 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 125 aa overlap). Probable frdD, fumarate reductase, membrane-anchor subunit (EC 1.3.99.1), similar to others e.g. P03806|FRDD_ECOLI fumarate reductase 13 kDa hydrophobic protein from Escherichia coli strain K12 (119 aa), FASTA scores: opt: 212, E(): 4.4e-08, (36.8% identity in 106 aa overlap); etc. NOTE THAT FUMARATE REDUCTASE FORMS PART OF AN ENZYME COMPLEX CONTAINING FOUR SUBUNITS: A FLAVOPROTEIN (Rv1552|frdA), AN IRON-SULFUR (Rv1553|frdB), AND TWO HYDROPHOBIC ANCHOR PROTEINS (Rv1554|frdC and Rv1555|frdD). PROBABLE FUMARATE REDUCTASE [MEMBRANE ANCHOR SUBUNIT] FRDD (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE)	IPR003418: Fumarate reductase, D subunit fumarate reductase, anaerobic, membrane anchor polypeptide	similar to Salmonella typhi CT18 fumarate reductase complex subunit D; membrane anchor polypeptide fumarate reductase complex subunit D; membrane anchor polypeptide	Fumarate reductase hydrophobic protein	fumarate reductase, 13 kDa hydrophobic protein	Similar to: HI0832, FRDD_HAEIN fumarate reductase subunit D	Fumarate reductase subunit D FrdD protein	Fumarate reductase subunit D	fumarate reductase, 13 kD hydrophobic protein	Code: C; COG: COG3080 fumarate reductase, anaerobic, membrane anchor polypeptide	Code: C; COG: COG3080 fumarate reductase, anaerobic, membrane anchor polypeptide	membrane anchor polypeptide; Code: C; COG: COG3080 fumarate reductase, anaerobic	Fumarate reductase subunit D	
ECOLI04005	Fumarate reductase subunit C	Fumarate reductase subunit C	Fumarate reductase subunit C	Fumarate reductase subunit C	putative fumarate reductase	Fumarate reductase subunit C	Fumarate reductase subunit C	Fumarate reductase 15 kDa hydrophobic protein	Fumarate reductase subunit C	Fumarate reductase subunit C	Fumarate reductase subunit C	Residues 1 to 131 of 131 are 98 pct identical to residues 1 to 131 of a 131 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290787.1 fumarate reductase, anaerobic, membrane anchor polypeptide	Fumarate reductase subunit C	Fumarate reductase subunit C	Fumarate reductase, subunit C	Fumarate reductase subunit C	IPR003510: Fumarate reductase, subunit C fumarate reductase, anaerobic, membrane anchor polypeptide	similar to Salmonella typhi CT18 fumarate reductase complex subunit C; membrane anchor polypeptide fumarate reductase complex subunit C; membrane anchor polypeptide	Fumarate reductase subunit C	fumarate reductase, 15 kDa hydrophobic protein	Similar to: HI0833, FRDC_HAEIN fumarate reductase subunit C	Fumarate reductase subunit C FrdC protein	Fumarate reductase subunit C	fumarate reductase, 15 kD hydrophobic protein	Code: C; COG: COG3029 fumarate reductase, anaerobic, membrane anchor polypeptide	Code: C; COG: COG3029 fumarate reductase, anaerobic, membrane anchor polypeptide	membrane anchor polypeptide; Code: C; COG: COG3029 fumarate reductase, anaerobic	Fumarate reductase subunit C	Fumarate reductase hydrophobic protein	
ECOLI04006	Fumarate reductase iron-sulfur subunit	Succinate dehydrogenase subunit B	Succinate dehydrogenase, iron-sulfur subunit B	Fumarate reductase iron-sulfur subunit	Succinate dehydrogenase iron sulfur subunit	Fumarate reductase iron-sulfur subunit	Possible succinate dehydrogenase iron-sulfur protein	Probable fumarate reductase, subunit B	Succinate dehydrogenase iron-sulfur protein	FrdB	Fumarate reductase, iron-sulfur protein	Fumarate reductase, iron-sulfur protein	putative fumarate reductase, iron-sulfur protein	Fumarate reductase iron-sulfur subunit	Succinate dehydrogenase and fumarate reductase iron-sulfur protein	Fumarate reductase, iron-sulfur protein	Fumarate reductase iron-sulfur protein	Succinate dehydrogenase, subunit B	Fumarate reductase, iron-sulfur protein	Fumarate reductase iron-sulfur subunit	Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit	Residues 20 to 263 of 263 are 100 pct identical to residues 1 to 244 of a 244 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290788.1 fumarate reductase, anaerobic, iron-sulfur protein subunit	Fumarate reductase iron-sulfur protein	Fumarate reductase iron-sulfur protein	Fumarate reductase, subunit B	Fumarate reductase iron-sulfur subunit	IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain; IPR006058: 2Fe-2S ferredoxin, iron-sulfur binding site fumarate reductase, anaerobic, Fe-S protein subunit	similar to Salmonella typhi CT18 fumarate reductase, iron-sulfur protein fumarate reductase, iron-sulfur protein	Fumarate reductase iron-sulfur protein	
ECOLI04007	Fumarate reductase flavoprotein subunit	Fumarate reductase flavoprotein subunit	FrdA	Fumarate reductase, flavoprotein subunit	Fumarate reductase, flavoprotein subunit	putative Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Fumarate reductase flavoprotein subunit	Fumarate reductase, flavoprotein subunit	Fumarate reductase flavoprotein subunit	Fumarate reductase, flavoprotein subunit	Fumarate reductase, anaerobic, flavoprotein subunit	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Residues 1 to 602 of 602 are 99 pct identical to residues 1 to 602 of a 602 aa protein from Escherichia coli K12 ref: NP_418578.1 fumarate reductase, anaerobic, flavoprotein subunit	Fumarate reductase flavoprotein subunit	Fumarate reductase flavoprotein subunit	Fumarate reductase flavoprotein subunit	Fumarate reductase flavoprotein subunit	Mb1578, frdA, len: 583 aa. Equivalent to Rv1552, len: 583 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 583 aa overlap). Probable frdA, fumarate reductase, flavoprotein subunit (EC 1.3.99.1), highly similar to others e.g. P00363|FRDA_ECOLI fumarate reductase flavoprotein subunit from Escherichia coli strain K12 (601 aa), FASTA scores: opt: 2102, E(): 0, (54.7% identity in 585 aa overlap); NP_232284.1|NC_002505 fumarate reductase, flavoprotein subunit from Vibrio cholerae (602 aa); frdA|NP_438995.1|NC_000907 fumarate reductase, flavoprotein subunit from Haemophilus influenzae (599 aa); etc. Contains PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. NOTE THAT FUMARATE REDUCTASE FORMS PART OF AN ENZYME COMPLEX CONTAINING FOUR SUBUNITS: A FLAVOPROTEIN (Rv1552|frdA), AN IRON-SULFUR (Rv1553|frdB), AND TWO HYDROPHOBIC ANCHOR PROTEINS (Rv1554|frdC and Rv1555|frdD). PROBABLE FUMARATE REDUCTASE [FLAVOPROTEIN SUBUNIT] FRDA (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE)	IPR001100: Pyridine nucleotide-disulphide oxidoreductase, class I; IPR001327: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; IPR003952: Fumarate reductase/succinate dehydrogenase, FAD-binding site fumarate reductase, anaerobic, flavoprotein subunit	similar to Salmonella typhi CT18 fumarate reductase, flavoprotein subunit fumarate reductase, flavoprotein subunit	Fumarate reductase flavoprotein subunit	fumarate reductase flavoprotein subunit	Similar to: HI0835, FRDA_HAEIN fumarate reductase flavoprotein subunit	Succinate dehydrogenase/fumarate reductase, flavoprotein subunits SdhA protein	Fumarate reductase	fumarate reductase flavoprotein subunit	Code: C; COG: COG1053 fumarate reductase, anaerobic, flavoprotein subunit	Code: C; COG: COG1053 fumarate reductase, anaerobic, flavoprotein subunit	Code: C; COG: COG1053 fumarate reductase, anaerobic, flavoprotein subunit	
ECOLI04008	Putative lysyl-tRNA synthetase	Lysyl-tRNA synthetase-related protein	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	Asparaginyl-tRNA synthetase, putative	Putative lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	Probable lysyl-tRNA synthetase	putative lysyl-tRNA synthetase-related protein	Lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	Lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	PMID: 1761227 best DB hits: BLAST: swissprot:Q9ZJ12; SYK3_SALTY PUTATIVE LYSYL-TRNA SYNTHETASE; E=1e-57 swissprot:P03812; SYK3_ECOLI PUTATIVE LYSYL-TRNA SYNTHETASE; E=2e-57 pir:S56383; lysine--tRNA ligase (EC 6.1.1.6) genX - Escherichia coli; E=2e-57 COG: yjeA; COG2269 Truncated, possibly inactive Class II lysyl-tRNA; E=2e-58 DR0372; COG1190 Lysyl-tRNA synthetase class II; E=2e-29 PFAM: PF00152; tRNA synthetases class II (D, K a; E=8.7e-07 lysine--tRNA ligase genX	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE LYSYL-TRNA SYNTHETASE PROTEIN	Putative lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	lysyl-tRNA synthetase	tRNA synthetase, class II family protein	Lysyl-tRNA synthetase	Putative lysyl-tRNA synthetase	
ECOLI04009	Inner membrane transporter yjeM	Inner membrane transporter yjeM	Hypothetical transporter yjeM	Putative transport	Amino acid transporter	Amino acid transporters	Amino acid transport protein	COG0531 Amino acid transporters amino acid permease	Amino acid permease	IPR002293: Amino acid/polyamine transporter, family I; IPR004841: Amino acid permease-associated region putative APC family, amino-acid transport protein	similar to Salmonella typhi CT18 putative amino acid permease putative amino acid permease	Inner membrane transporter yjeM	Putative amino acid/polyamine transport protein	Code: E; COG: COG0531 putative transport	Hypothetical transporter YjeM	Hypothetical transporter YjeM	Amino acid transporter	Amino acid transporter	Amino acid transporter	Hypothetical transporter	putative transporter	Probable transporter precursor	Putative amino-acid transport protein	Amino acid permease-associated region precursor	Putative uncharacterized protein	Amino acid permease family protein	Amino acid permease family protein	Amino acid permease-associated region	
ECOLI04010	Uncharacterized protein yjeN	similar to Salmonella typhi Ty2 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein yjeN	conserved hypothetical protein	Predicted protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjeN	Putative uncharacterized protein yjeN	Predicted protein	
ECOLI04011	Inner membrane protein yjeO	Similar to unknown protein YjeO of Escherichia coli	putative inner membrane protein	Putative integral membrane protein	Putative inner membrane protein	Putative uncharacterized protein yjeO	conserved hypothetical protein	Conserved inner membrane protein	Putative inner membrane protein precursor	Putative membrane protein	Putative uncharacterized protein	Inner membrane protein YjeO	Exported protein	Inner membrane protein YjeO	Inner membrane protein YjeO	Exported protein	Putative uncharacterized protein yjeO	Putative uncharacterized protein yjeO	Putative inner membrane protein	Putative membrane protein	Conserved inner membrane protein	
ECOLI04012	Uncharacterized mscS family protein yjeP	hypothetical membrane protein	Hypothetical protein yjeP	Transporter, putative	Putative mechanosensitive ion channel	Putative periplasmic binding protein	Residues 1 to 1103 of 1103 are 99 pct identical to residues 1 to 1107 of a 1107 aa protein from Escherichia coli K12 ref: NP_418583.1 putative periplasmic binding protein	Putative membrane transport protein	Uncharacterized protein family UPF0003	YjeP protein	Similar to unknown protein YjeP of Escherichia coli	Mechanosensitive ion-channel; protection against hypoosmotic shock	IPR006686: Mechanosensitive (MS) ion channel subdomain putative periplasmic binding protein	Small Conductance Mechanosensitive Ion Channel (MscS) Family Protein	Putative periplasmic binding protein	ortholog to Escherichia coli bnum: b4159; MultiFun: Transport 4.9.B putative membrane protein	Code: M; COG: COG3264 putative periplasmic binding protein	Code: M; COG: COG3264 putative periplasmic binding protein	putative periplasmic binding protein	Code: M; COG: COG3264 putative periplasmic binding protein	Putative mechanosensitive ion channel	MscS Mechanosensitive ion channel precursor	Putative membrane transport protein precursor	MscS Mechanosensitive ion channel precursor	Putative uncharacterized protein yjeP	Membrane transport protein precursor	small Conductance Mechanosensitive Ion Channel (MscS) Family Protein identified by match to protein family HMM PF00924	MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel KEGG: she:Shewmr4_0587 MscS mechanosensitive ion channel	Putative membrane transport protein	
ECOLI04013	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	identified by match to TIGR protein family HMM TIGR00163 phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	putative Phosphatidylserine decarboxylase	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	identified by match to protein family HMM PF02666; match to protein family HMM TIGR00163 phosphatidylserine decarboxylase	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	PMID: 3042771 PMID: 2406271 PMID: 1495415 best DB hits: BLAST: pir:F72029; phosphatidylserine decarboxylase (EC 4.1.1.65) precursor; E=3e-65 pir:D81745; probable phosphatidylserine decarboxylase (EC 4.1.1.65); E=7e-65 pir:E71482; phosphatidylserine decarboxylase (EC 4.1.1.65) precursor; E=9e-61 COG: CPn0839; COG0688 Phosphatidylserine decarboxylase; E=3e-66 PFAM: PF02666; Phosphatidylserine decarboxyla; E=1.9e-61 phosphatidylserine decarboxylase precursor	Phosphatidylserine decarboxylase proenzyme	Phosphatidylserine decarboxylase proenzyme	PHOSPHATIDYLSERINE DECARBOXYLASE PROENZYME (PSD) ,	Phosphatidylserine decarboxylase proenzyme	
ECOLI04014	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA	Probable GTPase engC	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA 2	Putative ribosome biogenesis GTPase rsgA	Putative uncharacterized protein	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA	Putative uncharacterized protein	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA	Probable GTPase engC protein 1	Putative uncharacterized protein	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase RsgA 1	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA 2	Putative ribosome biogenesis GTPase rsgA	Putative ribosome biogenesis GTPase rsgA	Putative uncharacterized protein	Putative ribosome biogenesis GTPase rsgA	putative GTPase	Putative ribosome biogenesis GTPase rsgA	
ECOLI04015	Oligoribonuclease	oligoribonuclease, mitochondrial precursor;	3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease. [Source:SGD;Acc:S000004049]	similar to sp|P54964 Saccharomyces cerevisiae YLR059c YNT20, hypothetical start	Probable oligoribonuclease [Source:GeneDB_Spombe;Acc:SPBC1347.07]	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	similar to uniprot|P54964 Saccharomyces cerevisiae YLR059c YNT20;	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	putative oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	go_component: mitochondrion [goid 0005739]; go_function: 3'-5' exonuclease activity [goid 0008408]; go_process: RNA processing [goid 0006396] oligoribonuclease, putative	Oligoribonuclease	Oligoribonuclease	Oligoribonuclease	
ECOLI04016	Putative electron transport protein yjeS	Sll1348 protein	Iron-sulfur cluster-binding protein	Putative iron-sulfur cluster-binding protein	Iron-sulfur cluster-binding protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE1320	Iron-sulfur cluster-binding protein, putative	Iron-sulfur-binding protein	Putative uncharacterized protein	Uncharacterized Fe-S protein	Putative 4Fe-4S binding protein	Iron-sulfur cluster-binding protein	Iron-sulfur cluster binding protein	Putative 4Fe-4S binding protein	Alr4943 protein	Putative iron-sulfur cluster-binding protein	Lmo0934 protein	Putative iron-sulfur cluster-binding protein	Iron-sulfur cluster-binding protein	Putative uncharacterized protein	Putative 4Fe-4S cluster-binding ferredoxin protein	putative iron-sulfur cluster-binding protein	Iron-sulfur cluster-binding protein	Putative electron transport protein yjeS	identified by match to protein family HMM PF00037; match to protein family HMM PF03130; match to protein family HMM TIGR00276 iron-sulfur cluster-binding protein, putative	identified by match to PFAM protein family HMM PF00037 iron-sulfur cluster-binding protein, putative	Iron-sulfur cluster-binding protein	
ECOLI04017	Uncharacterized protein yjeF	Uncharacterized protein MJ1586	Putative sugar kinase	YjeF family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Uncharacterized protein sll1433	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein	Vng1272c	Conserved protein	Short chain dehydrogenase fused to sugar kinase	Putative uncharacterized protein PH1950	Putative uncharacterized protein TVG0137051	Putative sugar kinase	YjeF family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein Ta1451	Hypothetical protein	Putative uncharacterized protein PF0200	hypothetical protein	Putative sugar kinase	Putative uncharacterized protein	Putative uncharacterized protein CPE0292	YjeF family protein	
ECOLI04018	UPF0079 ATP-binding protein yjeE	Putative uncharacterized protein	Putative uncharacterized protein	UPF0079 ATP-binding protein sll0257	Putative uncharacterized protein	UPF0079 ATP-binding protein HI0065	Putative ATPase/GTPase	Nucleotide-binding protein	Putative uncharacterized protein	UPF0079 ATP-binding protein aq_843	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein CPE2164	Putative uncharacterized protein	Putative uncharacterized protein	UPF0079 ATP-binding protein RC0013	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted ATPase or kinase	Putative uncharacterized protein yjeE	ATPase, YjeE family	Putative uncharacterized protein	Lmo2078 protein	UPF0079 ATP-binding protein ML0377	Putative ATP/GTP hydrolase	ATP/GTP hydrolase	Putative uncharacterized protein	
ECOLI04019	N-acetylmuramoyl-L-alanine amidase amiB	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase amiB	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase	N-acetylmuramoyl-L-alanine amidase	Residues 6 to 450 of 450 are 99 pct identical to residues 1 to 445 of a 445 aa protein from Escherichia coli K12 ref: NP_418590.1 N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase	Putative N-acetylmuramoyl-L-alanine amidase- family protein	N-acetylmuramoyl-L-alanine amidase AmiB	N-acetylmuramoyl-l-alanine amidase II, a murein hydrolase	similar to Salmonella typhi CT18 N-acetylmuramoyl-L-alanine amidase N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase	Putative N-acetylmuramoyl-L-alanine amidase- family protein	N-acetylmuramoyl-L-alanine amidase	N-acetylmuramoyl-L-alanine amidase amiB	ortholog to Escherichia coli bnum: b4169; MultiFun: Cell processes 5.1; Cell structure 6.2; Metabolism 1.6.7 N-acetylmuramoyl-L-alanine amidase	identified by match to protein family HMM PF01476; match to protein family HMM PF01520 N-acetylmuramoyl-L-alanine amidase	a murein hydrolase; Code: M; COG: COG0860 N-acetylmuramoyl-l-alanine amidase II	a murein hydrolase; Code: M; COG: COG0860 N-acetylmuramoyl-l-alanine amidase II	N-acetylmuramoyl-L-alanine amidase-like protein identified by match to protein family HMM PF01520	N-acetylmuramoyl-l-alanine amidase II	a murein hydrolase; Code: M; COG: COG0860 N-acetylmuramoyl-l-alanine amidase II	N-acetylmuramoyl-L-alanine amidase amiB	N-acetylmuramoyl-L-alanine amidase precursor	Putative N-acetylmuramoyl-L-alanine amidase- family protein precursor	N-acetylmuramoyl-L-alanine amidase precursor	N-acetylmuramoyl-L-alanine amidase AmiB	N-acetylmuramoyl-l-alanine amidase II identified by match to protein family HMM PF01520	
ECOLI04020	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	Residues 2 to 616 of 616 are 98 pct identical to residues 1 to 615 of a 615 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290800.1 enzyme in methyl-directed mismatch repair	DNA mismatch repair protein mutL	DNA mismatch repair protein mutL	IPR002099: DNA mismatch repair protein enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA	similar to Salmonella typhi CT18 DNA mismatch repair protein DNA mismatch repair protein	DNA mismatch repair protein mutL	Similar to Bacillus subtilis DNA mismatch repair protein MutL or BSU17050 SWALL:MUTL_BACSU (SWALL:P49850) (627 aa) fasta scores: E(): 1.5e-57, 31.65% id in 635 aa, and to Escherichia coli DNA mismatch repair protein MutL or B4170 SWALL:MUTL_ECOLI (SWALL:P23367) (615 aa) fasta scores: E(): 4.3e-38, 28.41% id in 623 aa putative DNA mismatch repair protein	DNA mismatch repair protein mutL	DNA mismatch repair protein MutL	DNA mismatch repair protein	Code: L; COG: COG0323 enzyme in methyl-directed mismatch repair	DNA mismatch repair protein	Code: L; COG: COG0323 enzyme in methyl-directed mismatch repair	DNA mismatch repair protein MutL	DNA mismatch repair protein	
ECOLI04021	tRNA delta(2)-isopentenylpyrophosphate transferase	Delta 2-isopentenyl pyrophosphate%3AtRNA isopentenyl transferase, required for biosynthesis of the modified base isopentenyladenosine in mitochondrial and cytoplasmic tRNAs; gene is nuclear and encodes two isozymic forms.  [Source:SGD;Acc:S000005800]	tRNA Delta(2)-isopentenylpyrophosphate transferase	similar to sp|P07884 Saccharomyces cerevisiae YOR274w MOD5 tRNA isopentenyltransferase singleton, start by similarity	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	similar to uniprot|P07884 Saccharomyces cerevisiae YOR274w MOD5 tRNA isopentenyltransferase;	similar to GB:L27667,  and PID:443686; identified by sequence similarity; putative tRNA delta-2-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase 1	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA Delta(2)-isopentenylpyrophosphate transferase	tRNA delta(2)-isopentenylpyrophosphate transferase	
ECOLI04022	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Lmo1295 protein	Protein hfq	Protein hfq	Protein hfq	putative host factor-I	Protein hfq	identified by match to protein family HMM PF01423; match to protein family HMM PF03329 host factor-I protein	similar to GP:5031480, and GP:5031480; identified by sequence similarity; putative host factor-I protein	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	Protein hfq	
ECOLI04023	GTP-binding protein hflX	GTP-binding protein	Conserved protein	GTP-binding protein	GTP-binding protein	GTP-binding protein	GTP-binding protein	Putative GTP-binding protein HflX	GTP-binding protein	426aa long hypothetical GTP-binding protein hflX	similar to GB:X58199, SP:P35612,  and PID:29369; identified by sequence similarity; putative GTP-binding protein HflX	GTP-binding protein	GTP-binding protein HflX	Putative ATP/GTP-binding protein	GTP-binding protein	GTP-binding protein HflX	HflX-like GTP-binding protein hflx	GTP-binding protein, gtp1/obg family	hypothetical GTP-binding protein hflX	GTP-binding protein	GTP-binding protein HflX	GTP-binding protein	HflX	Probable GTP-binding protein	Putative uncharacterized protein	GTP-binding protein HflX	GTP-binding protein HflX	GTP-binding protein HFLX	HflX protein, putative GTP-binding protein	
ECOLI04024	Protein hflK	HflK protein	Integral membrane protease subunit	Protein hflK	HflK	Protease subunit HflK	FtsH protease activity modulator HflK	HflK protein	HFLK protein	HflK protein	Probable lambda CII stability-governing protein	Putative membrane protein	HflK protein	putative Membrane protease subunits	Protein hflK	HflK protein	similar to SP:Q9KV09; identified by sequence similarity; putative hflK protein	HflK protein, putative	Protein hflK	Putative membrane protein	Putative membrane protein	HflK protein	Protein hflK	Putative phage-related protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by FrameD PUTATIVE MEMBRANE BOUND PROTEASE PROTEIN	Protein hflK	HflK protein	Putative membrane protein	FtsH protease activity modulator HflK	
ECOLI04025	Protein hflC	Integral membrane proteinase	Integral membrane proteinase subunit	Protein hflC	HflC protein	HflC	Protease subunit HflC	FtsH protease activity modulator HflC	HflC protein	HFLC protein	HflC protein	Putative membrane protein	HflC protein	putative hflC protein	Protein hflC	identified by match to PFAM protein family HMM PF01145 hflC protein	HflC protein, putative	Protein hflC	Protease activity modulator protein HflC	Putative inner membrane-anchored protein	Putative inner membrane-anchored protein	HflC protein	Putative phage-related protein	Putative uncharacterized protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE HYDROLASE SERINE PROTEASE TRANSMEMBRANE PROTEIN	Protein hflC	HflC protein	Putative inner membrane-anchored protein	FtsH protease activity modulator HflC	
ECOLI04026	Uncharacterized protein yjeT	Putative membrane protein	conserved hypothetical protein	Hypothetical protein yjeT	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein VP2813	Uncharacterized protein yjeT	Uncharacterized protein conserved in bacteria	Residues 1 to 65 of 65 are 100 pct identical to residues 1 to 65 of a 65 aa protein from Escherichia coli O157:H7 ref: NP_313179.1 orf, conserved hypothetical protein	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative membrane protein	hypothetical conserved protein	Putative inner membrane protein	Code: S; COG: COG3242 conserved hypothetical protein	Code: S; COG: COG3242 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3242; orf conserved hypothetical protein	Putative membrane protein YjeT	Hypothetical protein	Putative membrane protein	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Membrane protein	conserved hypothetical protein	
ECOLI04027	Adenylosuccinate synthetase	adenylosuccinate synthetase;	Adenylosuccinate synthase, catalyzes the first step in synthesis of adenosine monophosphate from inosine 5'monophosphate during purine nucleotide biosynthesis; exhibits binding to single-stranded autonomously replicating (ARS) core sequence.  [Source:SGD;Acc:S000005164]	highly similar to DEHA0C11858g Debaryomyces hansenii IPF 1645.1, start by similarity	Adenylosuccinate synthetase [Source:GeneDB_Spombe;Acc:SPAC144.03]	highly similar to sp|P80210 Saccharomyces cerevisiae YNL220w ADE12 adenylosuccinate synthetase singleton, start by similarity	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	adenylosuccinate synthetase	Adenylosuccinate synthetase 2	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	highly similar to uniprot|P80210 Saccharomyces cerevisiae YNL220w Adenylosuccinate synthetase;	Adenylosuccinate synthetase	DEHA2C10846p;highly similar to uniprot|P80210 Saccharomyces cerevisiae YNL220W ADE12 Adenylosuccinate synthase;	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	Adenylosuccinate synthetase	
ECOLI04028	HTH-type transcriptional repressor nsrR	Putative uncharacterized protein	Putative uncharacterized protein	HTH-type transcriptional repressor nsrR	Putative uncharacterized protein aau3	HTH-type transcriptional repressor nsrR	conserved hypothetical protein	HTH-type transcriptional repressor nsrR	identified by match to PFAM protein family HMM PF02082 RrF2 family protein	Transcriptional regulator, rrf2 protein, putative	Putative conserved DNA-binding protein	Putative conserved DNA-binding protein	Rrf2 family protein	HTH-type transcriptional repressor nsrR	PMID: 10761919 best DB hits: BLAST: pir:D81775; conserved hypothetical protein NMA2048 [imported] -; E=3e-17 pir:F81198; conserved hypothetical protein NMB0437 [imported] -; E=4e-17 gb:AAC61685.1; (AF052517) CDG1D [Acetobacter xylinus]; E=1e-15 COG: NMB0437; COG1959 Predicted transcriptional regulator; E=4e-18 PFAM: PF02082; Uncharacterized protein family UPF00; E=1.3e-33 conserved hypothetical protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Conserved protein	Putative conserved DNA-binding protein	hypothetical conserved protein	Putative transcriptional regulator	RRF2 FAMILY PROTEIN	HTH-type transcriptional repressor nsrR	HTH-type transcriptional repressor nsrR	CDS_ID OB0292 hypothetical protein	Aau3 protein	HTH-type transcriptional regulator nsrR	SC6D11.23, unknown, len: 148 aa. Similar to several proteins of undefined function e.g. Vibrio parahaemolyticus SW:YJEB_VIBPA(EMBL:U09005) hypothetical 15.6 KD protein (141 aa), fasta scores opt: 292 z-score: 356.7 E(): 1.9e-12 39.7% identity in 146 aa overlap. Conserved hypothetical protein SC6D11.23.	HTH-type transcriptional repressor nsrR	hypothetical protein	
ECOLI04029	Ribonuclease R	Exoribonuclease II	Ribonuclease R, putative	Truncated ribonuclease R	Acetazolamide conferring resistance protein zam	RNase R	Ribonuclease R	Ribonuclease R	identified by match to PFAM protein family HMM PF03415 exoribonuclease, VacB/Rnb family	Ribonuclease R	Ribonuclease II family protein	Ribonuclease R	Putative acetazolamide conferring resistance protein Zam	Ribonuclease R	Ribonuclease R	Exoribonuclease, VacB and RNase II family	Ribonuclease II family protein	VacB	Exoribonuclease RNase R	Ribonuclease R	Exoribonuclease R	Ribonuclease	VacB protein	Exoribonuclease II	Exoribonuclease	Ribonuclease R	Zam protein	Ribonuclease R	Related to ribonuclease R	
ECOLI04030	23S rRNA (guanosine-2'-O-)-methyltransferase rlmB	RNA methyltransferase, TrmH family, group 3	23S rRNA (guanosine-2'-O-)-methyltransferase rlmB	Uncharacterized tRNA/rRNA methyltransferase slr0955	23S rRNA (guanosine-2'-O-)-methyltransferase rlmB	Uncharacterized tRNA/rRNA methyltransferase MG252	Uncharacterized tRNA/rRNA methyltransferase MG252 homolog	23S rRNA (guanosine-2'-O-)-methyltransferase rlmB	similar to uniprot|P25270 Saccharomyces cerevisiae YOR201c rRNA guanosine-2 -O--methyltransferase;	tRNA/rRNA methyltransferase	SpoU rRNA methylase family protein	Putative tRNA/rRNA methyltransferase	rRNA methylase	Probable tRNA/rRNA methyltransferase	RNA methyltransferase, TrmH family	SpoU rRNA methylase family protein	tRNA/rRNA methyltransferase	23S rRNA (guanosine-2'-O-)-methyltransferase rlmB	23S rRNA (guanosine-2'-O-)-methyltransferase rlmB	23S rRNA (guanosine-2'-O-)-methyltransferase rlmB	Putative rRNA methylase	Putative uncharacterized protein	23S rRNA (guanosine-2'-O-)-methyltransferase rlmB	RNA methyltransferase, TrmH family	TRNA/rRNA methyltransferase	23S rRNA methyltransferase	23S rRNA (guanosine-2'-O-)-methyltransferase rlmB	tRNA/rRNA methyltransferase	RNA methyltransferase, TrmH family, group 3	
ECOLI04031	Uncharacterized protein yjfI	Putative uncharacterized protein	Putative uncharacterized protein yjfI	hypothetical protein	Hypothetical protein yjfI	Uncharacterized protein yjfI	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	uncharacterized protein conserved in bacteria COG3789	conserved hypothetical protein Similar to Pseudomonas syringae hypothetical protein SWALL:Q87YK8 (EMBL:AE016869) (217 aa) similarity:fasta; SWALL:Q87YK8 (EMBL:AE016869); Pseudomonas syringae; hypothetical protein; length 217 aa; id=38.09; ungapped id=40.58; E()=4e-11; 147 aa overlap; query 14-153 aa; subject 69-213 aa	Putative uncharacterized protein	conserved hypothetical protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Hypothetical protein	Putative uncharacterized protein yjfI	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical conserved protein	
ECOLI04032	Uncharacterized protein yjfJ	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	conserved hypothetical protein	Hypothetical protein yjfJ precursor	Putative uncharacterized protein	PspA/IM30 family protein	Putative alpha helical protein	hypothetical protein	Similar to unknown protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	similar to Salmonella typhimurium putative Phage shock protein A, IM30, suppresses sigma54-dependent transcription putative Phage shock protein A, IM30, suppresses sigma54-dependent transcription	Putative uncharacterized protein	Putative phage shock protein A	conserved hypothetical protein	identified by match to protein family HMM PF04012 PspA/IM30 family protein	identified by match to protein family HMM PF04012 PspA/IM30 family protein	identified by match to protein family HMM PF04012 PspA/IM30 family protein	PspA/IM30	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function; similar to E. coli YjfJ; could be a phage protein	Code: KT; COG: COG1842 putative alpha helical protein	phage shock protein A, PspA	phage shock protein A, PspA	Phage shock protein A (IM30), suppresses sigma54-dependent transcription COG1842	putative PspA/IM30 family protein	phage shock protein A, PspA KEGG: jan:Jann_2993 phage shock protein A, PspA, ev=3e-54, 53% identity	putative negative regulator protein PspA (suppresses sigma54-dependent transcription) similar to bll7613 [Bradyrhizobium japonicum] and PA3731 [Pseudomonas aeruginosa PA01] Similar to swissprot:Q89D32 Putative location:bacterial cytoplasm Psort-Score: 0.2921	
ECOLI04033	Uncharacterized protein yjfK	Putative uncharacterized protein yjfK	hypothetical protein	Hypothetical protein yjfK	Putative uncharacterized protein yjfK	Similar to unknown protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Hypothetical protein	Putative uncharacterized protein yjfK	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI04034	UPF0719 inner membrane protein yjfL	Putative uncharacterized protein	Putative uncharacterized protein	Predicted membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Surface protein	Putative uncharacterized protein	putative membrane protein	Hypothetical protein yjfL	Putative membrane protein	Putative uncharacterized protein	Putative membrane protein	UPF0719 inner membrane protein yjfL	Predicted membrane protein	Probable transmembrane protein	Similar to unknown protein	Probable transmembrane protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	identified by match to protein family HMM PF03994 predicted membrane protein	identified by match to protein family HMM PF03994 Domain of Unknown Function (DUF350) family	Protein of unknown function DUF350	
ECOLI04035	Uncharacterized protein yjfM	Hypothetical protein yjfM	Putative uncharacterized protein yjfM	Residues 1 to 212 of 212 are 97 pct identical to residues 1 to 212 of a 212 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290815.1 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative inner membrane protein	Code: S; COG: COG5463 conserved hypothetical protein	Code: S; COG: COG5463; orf conserved hypothetical protein	Putative membrane protein YjfM	Putative uncharacterized protein yjfM	conserved hypothetical protein Code: S; COG: COG5463	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	Putative inner membrane protein	Putative inner membrane protein	Putative uncharacterized protein yjfM	Putative inner membrane protein	Putative uncharacterized protein	Putative inner membrane protein	
ECOLI04036	Uncharacterized protein yjfC	Putative uncharacterized protein yjfC	Hypothetical protein yjfC	Putative synthetase/amidase	Residues 6 to 392 of 392 are 99 pct identical to residues 1 to 387 of a 387 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290816.1 putative synthetase-amidase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark synthetase/amidase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative glutathionylspermidine synthase	Code: E; COG: COG0754 putative synthetase/amidase	Code: E; COG: COG0754 putative synthetase/amidase	Glutathionylspermidine synthase-like	Code: E; COG: COG0754 putative synthetase/amidase	Putative glutathionylspermidine synthase YjfC	synthetase/amidase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	Putative synthetase/amidase	putative synthetase/amidase	Glutathionylspermidine synthase domain protein	Predicted synthetase/amidase	Glutathionylspermidine synthase domain protein	Glutathionylspermidine synthase	Glutathionylspermidine synthase domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Glutathionylspermidine synthase domain protein	Synthetase/amidase	Putative uncharacterized protein	Glutathionylspermidine synthase domain protein	Glutathionylspermidine synthase domain protein	Glutathionylspermidine synthase domain protein	
ECOLI04037	Protein aidB	Partial transposase ISC1225	Putative acyl-CoA dehydrogenase	Probable acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Probable acyl Co-A dehydrogenase	Putative acyl-CoA dehydrogenase	AidB protein	identified by match to PFAM protein family HMM PF02771 acyl-CoA dehydrogenase family protein	Putative acyl-CoA dehydrogenase	Putative acyl-CoA dehydrogenase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE OXIDOREDUCTASE PROTEIN	Putative acyl-CoA dehydrogenase	Putative acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase domain protein	ACYL-COA DEHYDROGENASE	Putative acyl coenzyme A dehydrogenase	probable acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Acyl-CoA dehydrogenase	Residues 2 to 434 of 460 are 99 pct identical to residues 1 to 433 of a 546 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290817.1 putative acyl coenzyme A dehydrogenase	Putative acyl-CoA dehydrogenase	Probable acyl-coa dehydrogenase oxidoreductase protein	Acyl-CoA dehydrogenase	FadE8	Acyl-CoA dehydrogenase protein	Acyl-CoA dehydrogenase, putative	Mb0691, fadE8, len: 542 aa. Equivalent to Rv0672, len: 542 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 542 aa overlap). Probable fadE8, acyl-CoA dehydrogenase (EC 1.3.99.-), highly similar to many e.g. CAC33951.1|AL589708 putative acyl-CoA dehydrogenase from Streptomyces coelicolor (557 aa); P33224|AIDB_ECOLI|B4187 aidb protein (ACYL-COA DEHYDROGENASES FAMILY) from Escherichia coli strain K12 (546 aa), FASTA scores: opt: 1369, E(): 0, (44.1% identity in 524 aa overlap); etc. Also similar to several other M.  tuberculosis proteins e.g. Rv0154cRv0154c|MTCI5.28c FASTA score: (26.3% identity in 342 aa overlap); etc. Contains acyl-CoA dehydrogenases signature 2 (PS00073). BELONG TO THE ACYL-COA DEHYDROGENASES FAMILY. PROBABLE ACYL-COA DEHYDROGENASE FADE8	
ECOLI04038	UPF0379 protein yjfN	UPF0379 protein yjfN precursor	Uncharacterized protein yjfN	Residues 1 to 91 of 91 are 100 pct identical to residues 1 to 91 of a 91 aa protein YJFN_ECOLI sp: P39296 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 hypothetical protein hypothetical protein	Putative inner membrane protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjfN	Putative exported protein precursor	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yjfN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI04039	UPF0379 lipoprotein yjfO	Hypothetical lipoprotein yjfO	Putative lipoprotein	Putative uncharacterized protein yjfO	Residues 1 to 142 of 142 are 100 pct identical to residues 1 to 142 of a 142 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290819.1 orf, conserved hypothetical protein	Putative lipoprotein	putative lipoprotein	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative lipoprotein	Putative lipoprotein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Hypothetical lipoprotein YjfO	Putative lipoprotein precursor	Putative uncharacterized protein yjfO	Lipoprotein precursor	Putative lipoprotein precursor	conserved hypothetical protein	Lipoprotein precursor	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yjfO	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Conserved protein	Putative lipoprotein	Putative uncharacterized protein	
ECOLI04041	HTH-type transcriptional regulator ulaR	Transcriptional regulator of sugar metabolism	Transcriptional regulator, DeoR family	HTH-type transcriptional regulator ulaR	hypothetical transcriptional regulator	HTH-type transcriptional regulator ulaR	Transcriptional regulator, DeoR family	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	HTH-type transcriptional regulator ulaR	transcriptional regulator	Transcriptional regulator of sugar metabolism	Residues 1 to 239 of 239 are 99 pct identical to residues 13 to 251 of a 251 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290821.1 putative DEOR-type transcriptional regulator	Transcriptional regulator protein	IPR001034: Bacterial regulatory protein, DeoR family putative transcriptional repressor (DeoR family)	similar to Salmonella typhi CT18 probable transcriptional regulator probable transcriptional regulator	Transcriptional regulators of sugar metabolism GlpR protein	HTH-type transcriptional regulator ulaR	probable DeoR-family transcription repressor	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	transcriptional regulator, DeoR family	Code: KG; COG: COG1349 putative DEOR-type transcriptional regulator	putative DeoR family transcriptional regulator involved in competition for nodulation similarity:fasta; SWALL:Q7BSH6 (EMBL:AF085687); Rhizobium leguminosarum; RhaR; rhaR; length 270 aa; 270 aa overlap; query 1-270 aa; subject 1-270 aa	probable transcriptional regulator protein, DeoR family Similar to AGR_L_2687p [Agrobacterium tumefaciens] Similar to swissprot:Q8UA88 Putative location:bacterial cytoplasm Psort-Score: 0.1288; go_component: intracellular [goid 0005622]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	HTH-type transcriptional regulator ulaR	HTH-type transcriptional regulator ulaR	transcription regulator DeoR family, putative	putative DEOR-type transcriptional regulator Code: KG; COG: COG1349	putative DEOR-type transcriptional regulator	
ECOLI04040	Esterase yjfP	Lmo2262 protein	Hypothetical protein yjfP	Putative uncharacterized protein	hypothetical conserved protein	Putative uncharacterized protein yjfP	CDS_ID OB1195 hypothetical protein	Putative uncharacterized protein	BH2917 protein	Lin2363 protein	Residues 1 to 249 of 249 are 98 pct identical to residues 1 to 249 of a 249 aa protein from Escherichia coli K12 ref: NP_418611.1 orf, conserved hypothetical protein	pseudo	Lipase/esterase	conserved protein; Molecular Function: catalytic activity (GO:0003824) conserved protein, putative esterase YitV	hydrolase, alpha/beta superfamily	IPR000379: Esterase/lipase/thioesterase putative hydrolase of the alpha/beta superfamily	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein rjfP	conserved hypothetical protein	Putative hydrolase of the alpha/beta superfamily	Code: R; COG: COG1073 conserved hypothetical protein	Code: R; COG: COG1073 conserved hypothetical protein	Conserved hypothetical protein COG1073 [R] Hydrolases of the alpha/beta superfamily	Code: R; COG: COG1073; orf conserved hypothetical protein	Hypothetical membrane protein YjfP	Hypothetical protein	Putative uncharacterized protein yjfP	Hypothetical protein	Hypothetical protein	
ECOLI04042	Probable L-ascorbate-6-phosphate lactonase ulaG	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VVA1602	Probable L-ascorbate-6-phosphate lactonase ulaG	conserved hypothetical protein	Probable L-ascorbate-6-phosphate lactonase ulaG	Putative uncharacterized protein	Putative uncharacterized protein VCA0248	Putative uncharacterized protein	Putative uncharacterized protein	Probable L-ascorbate-6-phosphate lactonase ulaG	Predicted Zn-dependent hydrolase of the beta- lactamase fold	Residues 1 to 356 of 356 are 99 pct identical to residues 1 to 356 of a 356 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290822.1 orf, conserved hypothetical protein	Metal-dependent hydrolase	putative Zn-dependent hydrolases of the beta-lactamase fold	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein gbs1841	identified by Glimmer2; putative conserved hypothetical protein	Metal-dependent hydrolase	best blastp match gb|AAK33282.1| (AE006487) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] conserved hypothetical protein	Conserved hypothetical protein	Predicted Zn-dependent hydrolases of the beta-lactamase fold Hypothetical protein	Probable L-ascorbate-6-phosphate lactonase ulaG	conserved hypothetical protein	identified by similarity to GB:AAP96600.1 conserved hypothetical protein	metal-dependent hydrolase	conserved hypothetical protein	Code: R; COG: COG2220 conserved hypothetical protein	
ECOLI04043	Ascorbate-specific permease IIC component ulaA	Putative uncharacterized protein	SgaT protein	Ascorbate-specific permease IIC component ulaA	putative SgaT protein	Ascorbate-specific permease IIC component ulaA	Putative PTS system, membrane component	SgaT protein	Putative PTS system membrane component	Transport protein SgaT	Putative PTS system, membrane component; possible ribulose-monophosphate PTS pathway enzyme IIC	Ascorbate-specific permease IIC component ulaA	TRANSPORT PROTEIN SGAT	Phosphotransferase system, galactitol-specific IIB component	Residues 1 to 484 of 484 are 99 pct identical to residues 1 to 484 of a 484 aa protein from Escherichia coli K12 ref: NP_418614.1 orf, conserved hypothetical protein	phosphotransferase protein for pentitol	PTS system, 3-keto-L-gulonate specific IIC component	IPR001064: Beta and gamma crystallin; IPR007333: Putative sugar-specific permease, SgaT/UlaA putative PTS enzyme IIsga subunit	similar to Salmonella typhi CT18 putative transport protein SgaT putative transport protein SgaT	Putative uncharacterized protein gbs1856	similar to GB:U14003 SP:P39301 PID:537034 GB:U00096 PID:2367358; identified by sequence similarity; putative transport protein SgaT, putative	Putative uncharacterized protein	best blastp match gb|AAK33274.1| (AE006486) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] conserved hypothetical protein	Putative Phosphotransferase system sugar-specific EII component	Uncharacterized BCR SgaT protein	Ascorbate-specific permease IIC component ulaA	putative PTS system Enzyme II sga subunit	identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG3037; TC:9.B.36.1.1 transport protein	identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG3037; TC:9.B.36.1.1 transport protein sgaT	
ECOLI04044	Ascorbate-specific phosphotransferase enzyme IIB component	Ascorbate-specific phosphotransferase enzyme IIB component	Ascorbate-specific phosphotransferase enzyme IIB component	PTS system, IIB component	Putative PTS system IIB component	PTS system enzyme IIB component	Putative PTS system, enzyme IIB component	Ascorbate-specific phosphotransferase enzyme IIB component	PENTITOL PHOSPHOTRANSFERASE ENZYME II, B COMPONENT	Residues 3 to 103 of 103 are 100 pct identical to residues 1 to 101 of a 101 aa protein from Salmonella enterica subsp. enterica serovar Typhi ref: NP_458818.1 putative PTS system IIB protein	pentitol phosphotransferase enzyme II, B component	PTS system, 3-keto-L-gulonate specific IIB component	putative PTS enzyme IIsga subunit	similar to Salmonella typhimurium putative PTS enzyme IIsga subunit putative PTS enzyme IIsga subunit	Putative uncharacterized protein gbs1855	similar to OMNI:SP2037; identified by sequence similarity; putative PTS system, IIB component	PTS system, 3-keto-L-gulonate specific IIB component	best blastp match gb|AAK33275.1| (AE006486) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] conserved hypothetical protein	Putative Phosphotransferase system sugar-specific EII component	Ascorbate-specific phosphotransferase enzyme IIB component	identified by sequence similarity; putative; ORF located using Blastx; COG3414 putative PTS system enzyme IIB component	identified by sequence similarity; putative; ORF located using Blastx; COG3414 PTS system enzyme IIB component	identified by sequence similarity; putative; ORF located using Glimmer; Blastx; COG3414 putative PTS system, IIB component	identified by match to protein family HMM PF02302 PTS system, IIB component, lactose/cellobiose family	PTS system, 3-keto-L-gulonate specific IIB component	Code: G; COG: COG3414 putative PTS system enzyme IIB protein	Code: G; COG: COG3414 conserved hypothetical protein	PTS system, 3-keto-L-gulonate specific IIB component	PTS system, 3-keto-L-gulonate specific IIB component	
ECOLI04045	Ascorbate-specific phosphotransferase enzyme IIA component	Putative uncharacterized protein	PTS system, IIA component	Ascorbate-specific phosphotransferase enzyme IIA component	putative phosphotransferase systemmannitol/fructose-specific IIA domain	Ascorbate-specific phosphotransferase enzyme IIA component	PTS system, IIA component	PTS system, IIA component	Putative PTS system IIA component	Ascorbate-specific phosphotransferase enzyme IIA component	PENTITOL PHOSPHOTRANSFERASE ENZYME II, A COMPONENT	Phosphotransferase system mannitol/fructose- specific IIA domain	Residues 1 to 154 of 154 are 95 pct identical to residues 1 to 154 of a 154 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290825.1 putative PTS system enzyme II A component	PTS system, 3-keto-L-gulonate specific IIA component	IPR002178: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; IPR008162: Inorganic pyrophosphatase putative PTS enzyme IIsga subunit	similar to Salmonella typhi Ty2 probable sugar phosphotransferase probable sugar phosphotransferase	Putative uncharacterized protein	best blastp match gb|AAK33276.1| (AE006486) conserved hypothetical protein [Streptococcus pyogenes M1 GAS] conserved hypothetical protein	Putative Phosphotransferase system sugar-specific EII component	Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) PtsN protein	Ascorbate-specific phosphotransferase enzyme IIA component	PTS system Enzyme II-A permease component	identified by match to protein family HMM PF00359 PTS system, IIA component	PTS system, 3-keto-L-gulonate specific IIA component	Code: GT; COG: COG1762 putative PTS system enzyme II A component	Code: GT; COG: COG1762 putative PTS system enzyme II A component	PTS system, 3-keto-L-gulonate specific IIA component	PTS system, 3-keto-L-gulonate specific IIA component	Code: GT; COG: COG1762 putative PTS system enzyme II A component	
ECOLI04046	3-keto-L-gulonate-6-phosphate decarboxylase ulaD	3-keto-L-gulonate-6-phosphate decarboxylase ulaD	3-keto-L-gulonate-6-phosphate decarboxylase ulaD	Hexulose phosphate synthase	Hexulose-6-phosphate synthase	3-keto-L-gulonate-6-phosphate decarboxylase ulaD	HEXULOSE-6-PHOSPHATE SYNTHASE	Hexulose-6-phosphate synthase	Residues 14 to 229 of 229 are 100 pct identical to residues 1 to 216 of a 216 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290826.1 putative hexulose-6-phosphate synthase	hexulose-6-phosphate synthase	IPR001754: Orotidine 5'-phosphate decarboxylase putative hexulose phosphate synthase (arabino hexulose phosphate formaldehyde lyase)	similar to Salmonella typhi CT18 putative hexulose-6-phosphate synthase putative hexulose-6-phosphate synthase	3-hexulose-6-phosphate synthase and related proteins SgbH protein	Similar to Escherichia coli probable hexulose-6-phosphate synthase SgaH or b4196 SWALL:SGAH_ECOLI (SWALL:P39304) (216 aa) fasta scores: E(): 9.8e-33, 46.75% id in 216 aa probable hexulose-6-phosphate synthase	3-keto-L-gulonate-6-phosphate decarboxylase ulaD	identified by sequence similarity; putative; ORF located using Blastx; COG0269 3-hexulose-6-phosphate synthase	identified by sequence similarity; putative; ORF located using Glimmer; GeneMark; Blastx; COG0269 3-hexulose-6-phosphate synthase	identified by sequence similarity; putative; ORF located using Glimmer;GeneMark; Blastx; COG0269 3-hexulose-6-phosphate synthase	Code: G; COG: COG0269 putative hexulose-6-phosphate synthase	Code: G; COG: COG0269 probable hexulose-6-phosphate synthase	Code: G; COG: COG0269 probable hexulose-6-phosphate synthase	3-keto-L-gulonate-6-phosphate decarboxylase ulaD	Putative hexulose-6-phosphate synthase	probable hexulose-6-phosphate synthase Code: G; COG: COG0269	3-hexulose-6-phosphate synthase related protein	putative hexulose-6-phosphate synthase	3-keto-L-gulonate 6-phosphate decarboxylase	Putative uncharacterized protein	3-keto-L-gulonate-6-phosphate decarboxylase ulaD	
ECOLI04047	L-ribulose-5-phosphate 3-epimerase ulaE	L-ribulose-5-phosphate 3-epimerase ulaE	L-ribulose-5-phosphate 3-epimerase ulaE	L-ribulose-5-phosphate 3-epimerase ulaE	Residues 1 to 284 of 284 are 98 pct identical to residues 1 to 284 of a 284 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290827.1 putative hexulose-6-phosphate isomerase	putative hexulose-6-phosphate isomerase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	L-ribulose-5-phosphate 3-epimerase ulaE	Code: G; COG: COG3623 putative hexulose-6-phosphate isomerase	Code: G; COG: COG3623 putative hexulose-6-phosphate isomerase	L-ribulose-5-phosphate 3-epimerase ulaE	L-ribulose-5-phosphate 3-epimerase ulaE	putative hexulose-6-phosphate isomerase Code: G; COG: COG3623	L-xylulose 5-phosphate 3-epimerase	L-xylulose 5-phosphate 3-epimerase	Putative uncharacterized protein	L-ribulose-5-phosphate 3-epimerase ulaE	L-xylulose 5-phosphate 3-epimerase	L-ribulose-5-phosphate 3-epimerase ulaE	L-ribulose-5-phosphate 3-epimerase ulaE	L-ribulose-5-phosphate 3-epimerase	Putative uncharacterized protein	Putative uncharacterized protein	L-ribulose-5-phosphate 3-epimerase	Putative uncharacterized protein	L-ribulose-5-phosphate 3-epimerase	L-ribulose-5-phosphate 3-epimerase	L-ribulose-5-phosphate 3-epimerase	Putative uncharacterized protein sgaU	
ECOLI04048	L-ribulose-5-phosphate 4-epimerase ulaF	Ribulose-5-phosphate 4-epimerase	L-ribulose-5-phosphate 4-epimerase ulaF	putative sugar isomerase SgaE, AraD/FucA family	L-ribulose-5-phosphate 4-epimerase ulaF	Sugar isomerase SgaE, AraD/FucA family	Sugar isomerase SgaE, AraD/FucA family	L-ribulose-5-phosphate 4-epimerase ulaF	Ribulose-5-phosphate 4-epimerase	Residues 17 to 244 of 244 are 99 pct identical to residues 1 to 228 of a 228 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290828.1 putative epimerase-aldolase	putative L-ribulose 5-phosphate 4-epimerase	similar to Salmonella typhi CT18 probable class II aldolase probable class II aldolase	L-ribulose-5-phosphate 4-epimerase ulaF	Code: G; COG: COG0235 putative epimerase/aldolase	Code: G; COG: COG0235 putative epimerase/aldolase	L-ribulose-5-phosphate 4-epimerase ulaF	putative sugar aldolase	Probable sugar isomerase SgaE	class II aldolase/adducin family protein PFAM: class II aldolase/adducin family protein KEGG: hch:HCH_01844 ribulose-5-phosphate 4-epimerase and related epimerase and aldolases	L-ribulose-5-phosphate 4-epimerase identified by match to protein family HMM PF00596	class II aldolase/adducin family protein PFAM: class II aldolase/adducin family protein KEGG: blo:BL0273 L-ribulose-5-phosphate 4-epimerase	L-ribulose 5-phosphate 4-epimerase	putative epimerase/aldolase Code: G; COG: COG0235	Sugar aldolase	Putative Class II aldolase/adducin domain protein	probable sugar isomerase SgaE	Class II aldolase/adducin family protein	Putative sugar epimerase/aldolase	Fuculose-1-phosphate aldolase, class II aldolase/adducin family	
ECOLI04049	UPF0379 protein yjfY	UPF0379 protein yjfY precursor	Uncharacterized protein yjfY	putative outer membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative outer membrane protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjfY	Putative exported protein precursor	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Putative uncharacterized protein yjfY	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Protein YjfY	Protein YjfY	Putative uncharacterized protein yjfY	Putative uncharacterized protein	
ECOLI04050	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	30S ribosomal protein S6	
ECOLI04051	Primosomal replication protein n	Primosomal replication protein n	Primosomal replication protein n	Primosomal replication protein n	putative Primosomal replication protein N	Primosomal replication protein n	Primosomal replication protein n	Primosomal replication protein n	Primosomal replication protein n	Primosomal replication protein n	Primosomal replication protein n	Primosomal replication protein n	Primosomal replication protein n	primosomal replication protein N	similar to Salmonella typhi CT18 primosomal replication protein N primosomal replication protein N	Primosomal replication protein n	Similar to: HI0546, PRIB_HAEIN primosomal replication protein N	Primosomal replication protein N PriB protein	Primosomal replication protein B	Primosomal replication protein n	identified by similarity to SP:P07013; match to protein family HMM PF00436 primosomal replication protein N	primosomal replication protein n	Code: L; COG: COG2965 primosomal replication protein N	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1856227; Product type f : factor primosomal replication protein N	Code: L; COG: COG2965 primosomal replication protein N	primosomal replication protein N	Code: L; COG: COG2965 primosomal replication protein N	Primosomal replication protein n	Single-strand binding protein/Primosomal replication protein n	
ECOLI04052	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	identified by match to TIGR protein family HMM TIGR00165 ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	30S ribosomal protein S18	
ECOLI04053	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	similar to GB:L09604, SP:Q04941,  and PID:177900; identified by sequence similarity; putative ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	50S ribosomal protein L9	
ECOLI04054	Uncharacterized protein yjfZ	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1790648 (265 aa). BLAST with identity of 97% in 185 aa. This CDS has been truncated.  The sequence has been checked and is believed to be correct. pseudo	conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjfZ	Putative uncharacterized protein yjfZ	Putative uncharacterized protein yjfZ	Putative uncharacterized protein yjfZ	Predicted protein	Predicted protein	
ECOLI04056	Uncharacterized protein ytfB	conserved hypothetical protein	Hypothetical protein ytfB	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ytfB	Residues 1 to 193 of 193 are 85 pct identical to residues 1 to 224 of a 224 aa protein from Escherichia coli K12 ref: NP_418627.1 orf, conserved hypothetical protein	Cell envelope opacity-associated protein A	putative cell envelope opacity-associated protein A	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	opacity associated proteins OapA	Putative cell envelope opacity-associated protein A	Code: M; COG: COG3061 conserved hypothetical protein	Code: M; COG: COG3061 conserved hypothetical protein	Code: M; COG: COG3061; orf conserved hypothetical protein	Putative membrane protein YtfB	Hypothetical protein	Putative uncharacterized protein ytfB	Hypothetical protein	Putative membrane protein	conserved hypothetical protein Code: M; COG: COG3061	Hypothetical protein	putative cell envelope opacity-associated protein	Opacity-associated protein A	Putative uncharacterized protein	Opacity-associated protein A	Predicted cell envelope opacity-associated protein	Opacity-associated protein A family	
ECOLI04055	Putative uncharacterized protein ytfA	Code: K; COG: COG1309 conserved hypothetical protein	Predicted transcriptional regulator	pseudo	
ECOLI04057	FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Probable FKBP-type peptidyl-prolyl cis-trans isomerase fkpA	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	putative peptidyl-prolyl cis-trans isomerase	FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	PMID: 9350870 PMID: 2925252 PMID: 1379319 PMID: 7516906 best DB hits: BLAST: gb:AAC45700.1; (U92214) macrophage infectivity potentiator; E=4e-36 gb:AAC45696.1; (U92229) macrophage infectivity potentiator; E=4e-35 gb:AAC45668.1; (U91606) macrophage infectivity potentiator; E=5e-35 COG: PA3262; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=1e-33 PFAM: PF01346; Domain amino terminal to FKBP-type p; E=7.4e-14 PF00254; FKBP-type peptidyl-prolyl cis-trans; E=2e-48 macrophage infectivity potentiator	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Residues 7 to 223 of 223 are 99 pct identical to residues 43 to 259 of a 259 aa protein from Escherichia coli O157:H7 ref: NP_313212.1 FKBP-type 22KD peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	IPR001179: Peptidylprolyl isomerase, FKBP-type FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase)	similar to Salmonella typhi CT18 probable FkbP-type peptidyl-prolyl cis-trans isomerase probable FkbP-type peptidyl-prolyl cis-trans isomerase	Peptidyl-prolyl cis-trans isomerase	Putative peptidyl-prolyl isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB	Similar to Escherichia coli, and Shigella flexneri FkbP-type 22 kDa peptidyl-prolyl cis-trans isomerase FklB or B4207 or SF4279 or s4544 SWALL:FKBB_ECOLI (SWALL:P39311) (205 aa) fasta scores: E(): 7e-30, 50.51% id in 194 aa, and to Bacteroides thetaiotaomicron FkbP-type peptidyl-prolyl cis-trans isomerase, outer membrane protein precursor BT2976 SWALL:Q8A3H8 (EMBL:AE016938) (194 aa) fasta scores: E(): 6.5e-66, 93.29% id in 194 aa, and to Porphyromonas gingivalis immunoreactive 21 kDa antigen PG10 SWALL:Q9X6S1 (EMBL:AF144077) (195 aa) fasta scores: E(): 8e-34, 52.33% id in 193 aa putative FkbP-type 22 kDa peptidyl-prolyl cis-trans isomerase	
ECOLI04058	D-serine/D-alanine/glycine transporter	D-serine/D-alanine/glycine transporter	DEHA2E01276p;similar to uniprot|P53388 Saccharomyces cerevisiae YPL265W DIP5 Dicarboxylic amino acid permease mediates high-affinity and high-capacity transport of L-glutamate and L-aspartate;	Amino acid permease	D-serine/D-alanine/glycine transporter	Lmo0787 protein	Amino acid permease	D-serine/D-alanine/glycine transporter	similar to SP:O06005, GB:M86808, SP:P29803, and PID:190790; identified by sequence similarity; putative amino acid permease family protein	D-serine/D-alanine/glycine transporter	Putative amino acid permease	Amino acid permease	D-SERINE/D-ALANINE/GLYCINE TRANSPORTER	D-serine/D-alanine/glycine transporter	similar to AE008906-10|AAL23218.1| percent identity: 63 in 429 aa putative amino acid permease	Amino acid permease	Amino acid permease	Lin0780 protein	D-serine /d-alanine /glycine transporter	Residues 1 to 470 of 470 are 99 pct identical to residues 1 to 470 of a 470 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290840.1 transport of D-alanine, D-serine, and glycine	D-serine/D-alanine/glycine transporter	Similar to D-serine/D-alanine/glycine transporter CycA	identified by match to protein family HMM PF00324 amino acid permease family protein	Amino acid permease	amino acid permease	D-serine/D-alanine/glycine transporter	PROBABLE D-SERINE/ALANINE/GLYCINE TRANSPORTER PROTEIN CYCA	Mb1730c, cycA, len: 556 aa. Equivalent to Rv1704c, len: 556 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 556 aa overlap). Probable cycA, D-serine/D-alanine/glycine transporter, highly similar to P39312|CYCA_ECOLI d-serine/d-alanine/glycine transporter from Escherichia coli (470 aa), FASTA scores: opt: 1906, E(): 0, (59.3% identity in 459 aa overlap); etc. Also similar to other Mycobacterium tuberculosis amino-acid permeases e.g. Rv2127, Rv0346c, etc. Contains PS00218 amino acid permeases signature. BELONGS TO THE AMINO ACID PERMEASE FAMILY (APC FAMILY). PROBABLE D-SERINE/ALANINE/GLYCINE TRANSPORTER PROTEIN CYCA	Molecular Function: amino acid-polyamine transporter activity (GO:0005279), Biological Process: amino acid transport (GO:0006865), Cellular Component: membrane (GO:0016020) Amino acid permease	
ECOLI04059	Regulator of cell morphogenesis and NO signaling	Uncharacterized protein HI1677	Putative uncharacterized protein CPE0775	Putative uncharacterized protein	Regulator of cell morphogenesis and NO signaling	Iron-sulfur cluster repair di-iron protein	Putative uncharacterized protein	Nitric oxide-dependent regulator DnrN	Cell division and morphogenesis-related protein	Regulator of cell morphogenesis and NO signaling	Putative uncharacterized protein	Regulator of cell morphogenesis and NO signaling	glimmer prediction conserved hypothetical protein	Putative uncharacterized protein	hypothetical conserved protein	Regulator of cell morphogenesis and NO signaling	Uncharacterized conserved protein, YTFE E.coli ortholog	Residues 1 to 220 of 220 are 100 pct identical to residues 1 to 220 of a 220 aa protein from Escherichia coli K12 ref: NP_418630.1 orf, conserved hypothetical protein	Regulator of cell morphogenesis and NO signaling	Cell wall-related protein scdA	Putative uncharacterized protein	identified by similarity to GP:1575061; match to protein family HMM PF03794; match to protein family HMM PF04405 scdA protein	Cell wall-related protein scdA	InterProMatches:IPR005544 conserved hypothetical protein	putative cell morphogenesis	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	cell division and morphogenesis-related protein	Regulator of cell morphogenesis and NO signaling	Hypothetical protein	
ECOLI04060	Inner membrane protein ytfF	similar to GB:M74042, PID:454843,  and SP:P50928; identified by sequence similarity; putative hypothetical protein	Integral membrane protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative cationic amino acid transporter	Hypothetical protein ytfF	Putative uncharacterized protein	Putative membrane protein	Membrane protein, putative	Putative transmembrane subunit	Putative uncharacterized protein	Permeases of the drug/metabolite transporter (DMT) superfamily	Residues 1 to 324 of 324 are 98 pct identical to residues 1 to 324 of a 324 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290842.1 putative transmembrane subunit	Cationic Amino Acid Transporter	Permease of the drug/metabolite transporter (DMT) superfamily	putative cationic amino acid transporter	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Similar to Shigella flexneri putative transmembrane subunit YtfF or SF4276 SWALL:Q83IK9 (EMBL:AE015435) (324 aa) fasta scores: E(): 1.3e-21, 27.45% id in 306 aa, and to Escherichia coli hypothetical protein YtfF or B4210 SWALL:YTFF_ECOLI (SWALL:P39314) (324 aa) fasta scores: E(): 5.4e-21, 27.12% id in 306 aa putative inner membrane protein	Integral membrane protein	COG0697 conserved hypothetical protein	Putative cationic amino acid transporter	integral membrane protein	ortholog to Escherichia coli bnum: b4210; MultiFun: Transport 4, 4.S.12 putative cationic amino acid transport protein	identified by match to protein family HMM PF00892 membrane protein, putative	identified by match to protein family HMM PF00892 membrane protein, putative	probable transmembrane protein	Protein of unknown function DUF6	
ECOLI04061	Uncharacterized oxidoreductase ytfG	DEHA2A10252p;similar to uniprot|Q7S346 Neurospora crassa NCU09169;	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ytfG	All2598 protein	Lmo0437 protein	Predicted nucleoside-diphosphate-sugar epimerases	Putative oxidoreductase	Hypothetical protein ytfG	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical conserved protein	Putative oxidoreductase	hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	BH0305 protein	SCD20.11c, conserved hypothetical protein, len: 284 aa; similar to SW:YTFG_ECOLI (EMBL:U14003) Escherichia coli hypothetical 29,7 kDa protein in RplI-CpdB intergenic region YtfG, 286 aa; fasta scores: opt: 801 z-score: 906.2 E(): 0; 47.1% identity in 280 aa overlap conserved hypothetical protein	Lin0459 protein	Residues 1 to 286 of 286 are 98 pct identical to residues 1 to 286 of a 286 aa protein from Escherichia coli K12 ref: NP_418632.1 putative oxidoreductase	Putative uncharacterized protein	Putative nucleoside-diphosphate-sugar epimerase	Putative uncharacterized protein lp_3236	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark oxidoreductase	Putative uncharacterized protein yweD	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	
ECOLI04062	Uncharacterized HTH-type transcriptional regulator ytfH	Putative transcriptional regulator	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ytfH	Alr2599 protein	Putative uncharacterized protein	Predicted transcriptional regulators	Transcriptional regulator, MarR family	Possible transcriptional regulator, MarR family	Hypothetical transcriptional regulator	Hypothetical protein ytfH	transcription regulator	identified by match to protein family HMM PF01638 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein ytfH	Residues 8 to 163 of 163 are 100 pct identical to residues 1 to 156 of a 156 aa protein from Escherichia coli K12 ref: NP_418633.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Transcription regulator	Transcriptional regulatory protein	Putative uncharacterized protein TTHA1244	IPR002577: Protein of unknown function DUF24 putative transcriptional regulator	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Predicted transcriptional regulators Hypothetical protein	Putative transcriptional regulator	Predicted transcriptional regulator	possible transcriptional regulator, MarR family	
ECOLI04063	2',3'-cyclic-nucleotide 2'-phosphodiesterase	2,3-cyclic-nucleotide 2-phosphodiesterase	Putative 2',3'-cyclic-nucleotide 2'- phosphodiesterase	CpdB	2`,3`-cyclic-nucleotide 2`-phosphodiesterase	2`,3`-cyclic-nucleotide 2`-phosphodiesterase	Putative 2,3-cyclic nucleotide 2- phosphodiesterase/3-nucleotidase	2',3'-cyclic-nucleotide 2'-phosphodiesterase	2',3'-cyclic-nucleotide 2'-phosphodiesterase	2',3'-cyclic-nucleotide 2'-phosphodiesterase	5'-nucleotidase	Putative 2',3'-cyclic-nucleotide 2'- phosphodiesterase	putative 2`,3`-cyclic-nucleotide 2`-phosphodiesterase	identified by match to protein family HMM PF00149; match to protein family HMM PF00746; match to protein family HMM PF02872; match to protein family HMM TIGR01167 2',3'-cyclic-nucleotide 2'-phosphodiesterase	2`,3`-cyclic-nucleotide 2`-phosphodiesterase	2',3'-cyclic-nucleotide 2'-phosphodiesterase	2',3'-cyclic-nucleotide 2'-phosphodiesterase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE 2',3'-CYCLIC-NUCLEOTIDE 2'-PHOSPHODIESTERASE PRECURSOR PROTEIN	5'-nucleotidase family protein	2,3-phosphodiesterase	2`,3`-cyclic-nucleotide 2`-phosphodiesterase	2',3'-cyclic-nucleotide 2'-phosphodiesterase	2',3'-cyclic-nucleotide 2'-phosphodiesterase	2':3'-cyclic-nucleotide 2'-phosphodiesterase	probable multifunctional phosphoesterase	SC7H2.29, possible secreted nucleotidase, len: 602 aa; similar to many e.g. SW:CN16_ECOLI periplasmic 2',3'-cyclic phosphodiesterase from Escherichia coli (647 aa) fasta scores; opt: 577, z-score: 618.9, E(): 3.8e-27, (32.3% identity in 595 aa overlap). Contains Pfam match to entry PF01009 5_nucleotidase, 5'-nucleotidase and Prosite match to PS00786 5'-nucleotidase signature 2. Also has possible N-terminal signal sequence. putative nucleotidase	2`,3`-cyclic-nucleotide 2`-phosphodiesterase	Residues 4 to 650 of 650 are 99 pct identical to residues 1 to 647 of a 647 aa protein from Escherichia coli K12 ref: NP_418634.1 2':3'-cyclic-nucleotide 2'-phosphodiesterase	2',3'-cyclic-nucleotide 2'-phosphodiesterase	
ECOLI04064	3'(2'),5'-bisphosphate nucleotidase cysQ	Bll2190 protein	Sulfite synthesis pathway protein	CysQ, sulfite synthesis pathway protein	CysQ protein	CysQ prottein	CysQ protein	3,5-bisphosphate nucleotidase CysQ	CysQ protein homolog	Inositol monophosphatase family protein	Exopolysaccharide production protein PssB	3'(2'),5'-bisphosphate nucleotidase cysQ	Sulfite synthesis pathway protein CysQ	putative sulfite synthesis pathway protein	Protein cysQ	similar to SP:P22255; identified by sequence similarity; putative 3'(2'),5'-bisphosphate nucleotidase	3'(2'),5'-bisphosphate nucleotidase CysQ	CysQ protein	Inositol monophosphatase family protein	3'(2'),5'-bisphosphate nucleotidase	inositol monophosphatase family protein	CYSQ PROTEIN	3'(2'),5'-bisphosphate nucleotidase cysQ	similar to AX066423-1|CAC26439.1| percent identity: 86 in 252 aa putative inositol monophosphatase CysQ	pssB protein, exopolysaccharide production	Putative CysQ protein	3'(2'),5'-bisphosphate nucleotidase cysQ	CYSQ PROTEIN	Inositol monophosphatase family	
ECOLI04065	Uncharacterized protein ytfI	Residues 1 to 312 of 312 are 94 pct identical to residues 1 to 312 of a 312 aa protein YTFI_ECOLI sp: P39317 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Predicted protein	
ECOLI04066	Uncharacterized protein ytfJ	Putative uncharacterized protein	Predicted transcriptional regulator	Putative exported protein	hypothetical transcriptional regulator	Protein ytfJ	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein ytfJ	Predicted transcriptional regulator	Residues 1 to 184 of 184 are 98 pct identical to residues 1 to 184 of a 184 aa protein from Escherichia coli K12 ref: NP_418637.1 orf, conserved hypothetical protein	Putative exported protein	Similar to unknown protein YtfJ of Escherichia coli	putative transcriptional regulator	similar to Salmonella typhi CT18 putative exported protein putative exported protein	Putative exported protein	protein YtfJ precursor	Similar to: HI0045, YTFJ_HAEIN conserved hypothetical protein	Putative transcriptional regulator	Code: R; COG: COG3054 conserved hypothetical protein	Code: R; COG: COG3054 conserved hypothetical protein	Code: R; COG: COG3054; orf conserved hypothetical protein	Protein YtfJ	Hypothetical protein precursor	YtfJ protein	Hypothetical protein precursor	conserved hypothetical protein identified by match to protein family HMM TIGR01626	Putative exported protein precursor	Hypothetical protein	
ECOLI04067	Uncharacterized protein ytfK	Putative uncharacterized protein ytfK	hypothetical protein	Hypothetical protein ytfK	Putative uncharacterized protein	Putative uncharacterized protein VP0305	Putative uncharacterized protein ytfK	Putative uncharacterized protein	Putative uncharacterized protein	Similar to unknown protein YtfK of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical protein	Putative cytoplasmic protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ytfK	Hypothetical protein	conserved hypothetical protein identified by match to protein family HMM PF06526	Hypothetical protein	Hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein ytfK	
ECOLI04068	UPF0053 inner membrane protein ytfL	identified by match to PFAM protein family HMM PF03471 hypothetical protein	Putative uncharacterized protein	Putative hemolysin	Putative membrane protein	UPF0053 inner membrane protein ytfL	Hemolysin, putative	CBS domain protein	Putative membrane protein	UPF0053 inner membrane protein ytfL	Hemolysin	Residues 1 to 447 of 447 are 99 pct identical to residues 1 to 447 of a 447 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290850.1 putative transport protein	Putative membrane protein	Probable transmembrane protein	Similar to putative transport protein YtfL of Escherichia coli	Putative uncharacterized protein	IPR000644: CBS domain putative hemolysin-related protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	CorC/HlyC family of putative transporters	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pm : putative membrane component putative hemolysin-related protein	Similar to: HI0452, YTFL_HAEIN conserved hypothetical protein	Uncharacterized CBS domain-containing proteins Hypothetical protein	Putative hemolysin-related protein	conserved hypothetical protein	Hypothetical membrane-spanning protein	conserved hypothetical protein	CBS:Protein of unknown function DUF21:Transporter-associated region	Code: R; COG: COG1253 putative transport protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative membrane protein with CBS regulatory domain	
ECOLI04069	Peptide methionine sulfoxide reductase msrA	peptide methionine sulfoxide reductase;	Peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase msrA	Peptide methionine sulfoxide reductase msrA	Peptide methionine sulfoxide reductase msrA (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide- methionine	Peptide methionine sulfoxide reductase msrA	similar to uniprot|P40029 Saccharomyces cerevisiae YER042w MXR1;	Peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase msrA	Peptide methionine sulfoxide reductase msrA 1	Peptide methionine sulfoxide reductase msrA	Peptide methionine sulfoxide reductase msrA	Peptide methionine sulfoxide reductase msrA	Peptide methionine sulfoxide reductase msrA 2	Peptide methionine sulfoxide reductase msrA	putative peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase msrA (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide- methionine	similar to GP:14250948, and SP:P27110; identified by sequence similarity; putative peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase msrA	Peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase msrA	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PEPTIDE METHIONINE SULFOXIDE REDUCTASE PROTEIN	Peptide methionine sulfoxide reductase msrA	protein-methionine-S-oxide reductase	Peptide methionine sulfoxide reductase	Peptide methionine sulfoxide reductase msrA (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide- methionine	Peptide methionine sulfoxide reductase msrA	Peptide methionine sulfoxide reductase msrA	
ECOLI04070	Uncharacterized protein ytfM	Putative uncharacterized protein	Uncharacterized protein HI0698	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Outer membrane protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative uncharacterized protein	hypothetical outer membrane protein	Hypothetical protein ytfM	identified by match to PFAM protein family HMM PF01103 conserved hypothetical protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein	Putative exported protein	Outer membrane protein, OMP85 family	OUTER MEMBRANE PROTEIN	Putative uncharacterized protein VP0307	Uncharacterized protein ytfM	hypothetical protein	Outer membrane protein	Outer membrane protein	Residues 1 to 577 of 577 are 99 pct identical to residues 1 to 577 of a 577 aa protein from Escherichia coli O157:H7 ref: NP_313225.1 orf, conserved hypothetical protein	
ECOLI04071	Uncharacterized protein ytfN	Putative uncharacterized protein	Uncharacterized protein HI0696	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VV0429	Putative exported protein	Putative uncharacterized protein	hypothetical protein	Hypothetical protein ytfN	similar to GP:15076022; identified by sequence similarity; putative conserved hypothetical protein	Putative uncharacterized protein	Putative exported protein	Putative exported protein	Putative uncharacterized protein	Putative membrane protein	Uncharacterized protein BUsg_080	Putative uncharacterized protein	Putative exported protein	Putative uncharacterized protein VP0308	Putative uncharacterized protein ytfN	Hypothetical outer membrane protein	Uncharacterized protein BU087	Putative uncharacterized protein	Residues 1 to 1259 of 1259 are 99 pct identical to residues 1 to 1259 of a 1259 aa protein from Escherichia coli K12 ref: NP_418642.1 orf, conserved hypothetical protein	Putative exported protein	Putative transmembrane protein	Similar to unknown protein YtfN of Escherichia coli	
ECOLI04072	UPF0131 protein ytfP	Putative uncharacterized protein PF0646	Putative uncharacterized protein VV0430	Putative uncharacterized protein ytfP	conserved hypothetical protein	UPF0131 protein ytfP	UPF0131 protein VC_2546	Putative uncharacterized protein	Putative uncharacterized protein VP0309	UPF0131 protein ytfP	Putative uncharacterized protein	Residues 1 to 113 of 113 are 100 pct identical to residues 1 to 113 of a 113 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290854.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YtfP of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Putative cytoplasmic protein	Code: S; COG: COG2105 conserved hypothetical protein	Code: S; COG: COG2105 conserved hypothetical protein	conserved hypothetical protein identified by similarity to SP:P39323; match to protein family HMM PF03674	conserved hypothetical protein identified by similarity to PIR:AF1055; match to protein family HMM PF03674	conserved hypothetical protein	protein of unknown function UPF0131	Code: S; COG: COG2105; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein ytfP	Hypothetical protein	
ECOLI04074	PemI-like protein 2	PemI-like protein	SpoVT/AbrB-like	Code: T; COG: COG2336 suppressor of inhibitory function of ChpB, PemI-like, autoregulated	Transcriptional regulator/antitoxin, MazE	Transcriptional regulator/antitoxin, MazE	PemI protein 2	Transcriptional regulator/antitoxin, MazE	Antitoxin of the ChpB-ChpS toxin-antitoxin system	PemI protein 2	PemI protein 2	Suppressor of inhibitory function of ChpB	PemI protein 2	Putative uncharacterized protein	Antitoxin of the ChpB-ChpS toxin-antitoxin system	Antitoxin of the ChpB-ChpS toxin-antitoxin system	Antitoxin of the ChpB-ChpS toxin-antitoxin system	Addiction module, antitoxin ChpS	Antitoxin of the ChpB-ChpS toxin-antitoxin system	Antitoxin of the ChpB-ChpS toxin-antitoxin system	Transcriptional regulator/antitoxin, MazE	antitoxin ChpS of the ChpB-ChpS toxin-antitoxin system	Antitoxin component of the ChpB-ChpS toxin- antitoxin system	
ECOLI04075	PemK-like protein 2	PemK protein	Probable growth inhibitor, PemK-like, autoregulated	Residues 1 to 120 of 121 are 31 pct identical to residues 1 to 118 of a 119 aa protein from Agrobacterium tumefaciens str. C58 (U. Washington) ref: NP_531638.1 PemK protein	PemK-like protein	Transcriptional regulator, PemK family	Code: T; COG: COG2337 probable growth inhibitor, PemK-like, autoregulated	Transcriptional modulator of MazE/toxin, MazF	probable growth inhibitor, PemK-like, autoregulated Code: T; COG: COG2337	Putative plamid toxin PemK protein	Transcriptional modulator of MazE/toxin, MazF	PemK protein 2	Toxin of the ChpB-ChpS toxin-antitoxin system	PemK protein 2	PemK protein 2	Transcriptional regulator, PemK family	Transcriptional modulator of MazE/toxin, MazF	PemK protein 2	Putative transcriptional regulator	Transcriptional modulator of MazE/toxin, MazF	Toxin of the ChpB-ChpS toxin-antitoxin system	Toxin of the ChpB-ChpS toxin-antitoxin system	Growth inhibitor, PemK-like, autoregulated/transcriptional modulator of MazE/toxin, MazF, plasmid stable inheritance protein K	Toxin of the ChpB-ChpS toxin-antitoxin system	Pemk-like protein 2	Addiction module, toxin ChpB	Toxin of the ChpB-ChpS toxin-antitoxin system	Toxin of the ChpB-ChpS toxin-antitoxin system	Transcriptional modulator of MazE/toxin, MazF	
ECOLI04076	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	similar to GB:Z14955, GB:Z14954, GB:Z29574, GB:Z29575, SP:Q02223, PID:1930146, PID:29408, PID:33807, PID:471245,  and PID:499189; identified by sequence similarity; putative inorganic pyrophosphatase, putative	Soluble inorganic pyrophosphatase	Putative inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	
ECOLI04077	ABC transporter periplasmic-binding protein ytfQ	Probable solute binding protein of ABC transporter system possibly for sugars	ABC transporter, substrate binding protein	Putative ABC periplasmic-binding sugar transport protein	ABC transporter Periplasmic binding protein ytfQ	ABC transporter periplasmic binding protein	Product confidence : putative Gene name confidence : hypothetical putative sugar uptake ABC transporter periplasmic solute-binding protein precursor	Putative LACI-type transcriptional regulator	Putative uncharacterized protein	Residues 1 to 239 of 239 are 99 pct identical to residues 80 to 318 of a 318 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290859.1 putative LACI-type transcriptional regulator	Putative periplasmic protein	Sugar ABC transporter	ABC transporter, periplasmic ribose/sugar binding protein	Code: G; COG: COG1879 putative LACI-type transcriptional regulator	Code: G; COG: COG1879 putative LACI-type transcriptional regulator	putative periplasmic-binding protein component of ABC transporter similarity:fasta; with=UniProt:RBSB_BACSU (EMBL:BSRIBOSOP); Bacillus subtilis.; rbsB; D-ribose-binding protein precursor.; length=305; id 33.442; 308 aa overlap; query 1-303; subject 9-303 similarity:fasta; with=UniProt:Q926G2_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative sugar uptake ABC transporter periplasmic solute-binding protein.; length=320; id 85.938; 320 aa overlap; query 1-320; subject 1-320	Periplasmic binding protein/LacI transcriptional regulator precursor	probable sugar ABC transporter, substrate-binding protein similar to SMb21587 [Sinorhizobium meliloti] Similar to swissprot:Q926G2 Putative location:bacterial periplasmic space Psort-Score: 0.9314; go_component: extrachromosomal DNA [goid 0046821]	ABC transporter periplasmic binding protein YtfQ	Periplasmic binding protein/LacI transcriptional regulator precursor	Putative periplasmic protein precursor	putative LACI-type transcriptional regulator	Putative LACI-type transcriptional regulator	periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator KEGG: bte:BTH_I2342 periplasmic ribose-binding protein	periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator KEGG: bte:BTH_I2342 periplasmic ribose-binding protein	Periplasmic protein precursor	periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator KEGG: bcn:Bcen_5627 periplasmic binding protein/LacI transcriptional regulator	periplasmic ribose-binding protein identified by match to protein family HMM PF00532	Putative periplasmic protein precursor	
ECOLI04078	Uncharacterized ABC transporter ATP-binding protein ytfR	ATP binding protein of ABC transporter	ABC transporter, nucleotide binding/ATPase protein	Putative ATP-binding component of a transport system	ABC transporter ATP-binding protein	Product confidence : putative Gene name confidence : hypothetical putative sugar uptake ABC transporter ATP-binding protein	Uncharacterized ABC transporter ATP-binding protein ytfR	Residues 1 to 500 of 500 are 98 pct identical to residues 1 to 500 of a 500 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290860.1 putative ATP-binding component of ABC transporter	Putative sugar transport system ATP-binding protein	Sugar ABC transporter	ABC ribose/sugar transporter, fused ATP-binding domains	Code: G; COG: COG1129 putative ATP-binding component of a transport system	Code: G; COG: COG1129 putative ATP-binding component of a transport system	putative solute-binding component of ABC transporter similarity:fasta; with=UniProt:Q92UR5_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative sugar uptake ABC transporter ATP-binding protein.; length=505; id 75.100; 498 aa overlap; query 6-503; subject 6-502	probable sugar ABC transporter, ATP-binding protein similar to SMb21588 [Sinorhizobium meliloti] Similar to swissprot:Q92UR5 Putative location:bacterial inner membrane Psort-Score: 0.1553; go_component: membrane [goid 0016020]; go_component: extrachromosomal DNA [goid 0046821]; go_function: ATP binding [goid 0005524]; go_function: nucleotide binding [goid 0000166]; go_function: ATP-binding cassette (ABC) transporter activity [goid 0004009]; go_process: transport [goid 0006810]	Putative sugar transport system ATP-binding protein	ABC transporter related	Putative sugar transport system ATP-binding protein	putative sugar uptake ABC transporter ATP-binding protein	Putative ATP-binding component of a transport system	Sugar transport system ATP-binding protein	ATP binding protein of ABC transporter identified by match to protein family HMM PF00005	Putative sugar transport system ATP-binding protein	ABC-type sugar transporter, ATP-binding protein	ABC transporter related PFAM: ABC transporter related SMART: AAA ATPase KEGG: sde:Sde_0767 putative sugar uptake ABC transporter ATP-binding protein	Putative ABC transporter ATP-binding protein	putative ATP-binding component of a transport system Code: G; COG: COG1129	ABC transporter related PFAM: ABC transporter related SMART: AAA ATPase KEGG: shm:Shewmr7_1987 ABC transporter related	Sugar transport system ATP-binding protein	
ECOLI04079	Inner membrane ABC transporter permease protein ytfT	Probable ABC transport system permease protein for sugars	ABC transporter, membrane spanning protein	Ribose/galactose ABC transporter, permease protein	Hypothetical ABC transporter permease protein ytfT	Ribose/galactose ABC transporter, permease protein	Putative ABC transporter permease protein	Product confidence : putative Gene name confidence : hypothetical putative sugar uptake ABC transporter permease protein	Putative sugar ABC transporter	Putative transport system permease protein	Residues 8 to 348 of 348 are 97 pct identical to residues 1 to 341 of a 341 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290861.1 putative transport system permease protein	Putative sugar transport system permease	Nucleoside transport system permease protein	ABC transporter sugar permease protein	Sugar ABC transporter	ABC ribose/sugar transporter, permease domain	Ribose/galactose ABC transporter, permease protein	Nucleoside transport system permease protein	best blastp match gb|AAK34085.1| (AE006563) putative sugar ABC transporter (permease protein) [Streptococcus pyogenes M1 GAS] putative sugar ABC transporter (permease protein)	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transport protein (ABC superfamily, membrane)	carbohydrate ABC uptake transporter membrane-spanning protein	nucleoside transport system permease protein	Code: G; COG: COG1172 putative transport system permease protein	Code: G; COG: COG1172 putative transport system permease protein	Nucleoside transport system permease protein	Nucleoside transport system permease protein	Code: G; COG: COG1172 putative transport system permease protein	putative transmembrane component of ABC transporter similarity:fasta; with=UniProt:Q92UR4_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative sugar uptake ABC transporter permease protein. Putative sugar uptake ABC transporter permease protein.; length=341; id 74.303; 323 aa overlap; query 5-327; subject 5-327	Inner-membrane translocator precursor	
ECOLI04080	Inner membrane ABC transporter permease protein yjfF	Putative simple sugar ABC transporter permease protein	ABC transporter, membrane spanning protein	Hypothetical ABC transporter permease protein yjfF	Putative ABC transporter permease protein	Product confidence : putative Gene name confidence : hypothetical putative sugar uptake ABC transporter permease protein	Putative transport system permease protein	Residues 1 to 290 of 290 are 99 pct identical to residues 1 to 290 of a 331 aa protein YJFF_ECOLI sp: P37772 orf, conserved hypothetical protein	Putative sugar transport system permease	Sugar ABC transporter	ABC ribose/sugar transporter, permease domain	Code: G; COG: COG1172 putative transport system permease protein	Code: G; COG: COG1172 putative transport system permease protein	Code: G; COG: COG1172 putative transport system permease protein	putative transmembrane component of ABC transporter similarity:fasta; with=UniProt:Q92UR3_RHIME (EMBL:RME591985); Rhizobium meliloti (Sinorhizobium meliloti).; Putative sugar uptake ABC transporter permease protein.; length=322; id 82.298; 322 aa overlap; query 1-322; subject 1-322	Inner-membrane translocator precursor	probable sugar ABC transporter, permease protein similar to SMb21590 [Sinorhizobium meliloti] Similar to swissprot:Q92UR3 Putative location:bacterial inner membrane Psort-Score: 0.8593; go_component: membrane [goid 0016020]; go_component: extrachromosomal DNA [goid 0046821]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810]	Hypothetical ABC transporter permease protein YjfF	Inner-membrane translocator precursor	Putative sugar transport system permease precursor	Helix-turn-helix, AraC type	hypothetical protein similarity to COG0559 Branched-chain amino acid ABC-type transport system, permease components(Evalue: 4E-60)	Hypothetical ABC transporter permease protein yjfF	inner-membrane translocator PFAM: inner-membrane translocator KEGG: bte:BTH_I2345 ribose ABC transporter, permease protein	ABC-type branched-chain amino acid transport system, permease component	inner-membrane translocator PFAM: inner-membrane translocator KEGG: bte:BTH_I2345 ribose ABC transporter, permease protein	Sugar transport system permease precursor	inner-membrane translocator PFAM: inner-membrane translocator KEGG: bcn:Bcen_5624 inner-membrane translocator	ribose ABC transporter, permease protein identified by match to protein family HMM PF02653	
ECOLI04081	Fructose-1,6-bisphosphatase class 1	fructose-1,6-bisphosphatase;	Fructose-1,6-bisphosphatase, key regulatory enzyme in the gluconeogenesis pathway, required for glucose metabolism; undergoes either proteasome-mediated or autophagy-mediated degradation depending on growth conditions; interacts with Vid30p.  [Source:SGD;Acc:S000004369]	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase [Source:GeneDB_Spombe;Acc:SPBC1198.14c]	gi|462044|sp|Q05079|F16P_KLULA Kluyveromyces lactis FRUCTOSE-1, 6-BISPHOSPHATASE (D-FRUCTOSE-1, 6-BISPHOSPHATE 1-PHOSPHOHYDROLASE) (FBPASE), start by similarity	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-bisphosphatase	DEHA2F01100p;highly similar to uniprot|P09201 Saccharomyces cerevisiae YLR377C FBP1 Fructose-1 6-bisphosphatase key regulatory enzyme in the gluconeogenesis pathway required for glucose metabolism;	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-1;6-bisphosphatase	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	putative fructose-1,6-bisphosphatase	Fructose-1,6-bisphosphatase	fructose-16-bisphosphatase	similar to GB:J05243, GB:M18627, GB:M19725, GB:M24773, GB:X86901, GB:U26396, SP:Q13813, PID:178426, PID:179106, PID:1805280, PID:537331, PID:829111, PID:836669, GB:J05243, GB:M18627, GB:M19725, GB:M24773, GB:X86901, GB:U26396, SP:Q13813, PID:178426, PID:179106, PID:1805280, PID:537331, PID:829111, and PID:836669; identified by sequence similarity; putative fructose-1-6-bisphosphatase	Fructose-1,6-bisphosphatase class 1	Fructose-1,6-bisphosphatase class 1	
ECOLI04082	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate-L-alanine ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	Putative uncharacterized protein	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate-alanine ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	Murein peptide ligase	Probable UDP-N-acetylmuramate:L-alanyl-gamma-D- glutamyl-meso-diamino pimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase	putative UDP-N-acetylmuramate-alanine ligase	Mpl protein	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	Udp-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	Putative ligase	UDP-N-acetylmuramate-alanine ligase	UDP-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase	Residues 1 to 457 of 457 are 99 pct identical to residues 1 to 457 of a 457 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290864.1 putative ligase	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-m e so-diaminopimelate ligase	
ECOLI04083	UPF0307 protein yjgA	UPF0307 protein XCC2605	UPF0307 protein HI1151	UPF0307 protein NMB0840	UPF0307 protein PM0119	UPF0307 protein PA4473	UPF0307 protein VV0440	UPF0307 protein yjgA	Putative uncharacterized protein	conserved hypothetical protein	UPF0307 protein yjgA	Putative uncharacterized protein	UPF0307 protein VC_2536	UPF0307 protein BP2965	UPF0307 protein BB4360	UPF0307 protein SO_4079	UPF0307 protein ECA0281	UPF0307 protein PSPTO_4464	UPF0307 protein BPP3887	Putative uncharacterized protein	UPF0307 protein VP2677	UPF0307 protein yjgA	UPF0307 protein VV1_0700	Residues 1 to 183 of 183 are 98 pct identical to residues 1 to 183 of a 183 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290865.1 putative alpha helix protein	UPF0307 protein YPO3691/y0172/YP_3853	UPF0307 protein NE2194	UPF0307 protein RSc0944	UPF0307 protein plu4061	similar to conserved hypothetical protein hypothetical protein	
ECOLI04084	Protein pmbA	PmbA protein	PmbA protein	Protein pmbA homolog	Putative modulator of DNA gyrase	PmbA protein	PmbA protein	PmbA	PmbA protein	PmbA protein	PmbA/TldD related protein	Putative PmbA protein	Microcin-processing peptidase	PmbA protein	putative pmbA protein	PmbA protein	similar to GB:V00566, GB:J00299, GB:M29386, GB:D00411, SP:P01236, GB:U75583, PID:1620399, PID:1658518, PID:190354, PID:190356, PID:220018, PID:34211, PID:531101, and PID:531103; identified by sequence similarity; putative pmbA protein	Putative uncharacterized protein pmbA	PmbA protein	Putative uncharacterized protein	Putative uncharacterized protein	Pmba protein	Putative modulator of DNA gyrase	Product confidence : hypothetical Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD HYPOTHETICAL PMBA PROTEIN	Protein pmbA homolog	PmbA protein	Putative uncharacterized protein	PmbA protein	PMBA PROTEIN	
ECOLI04085	pseudo	Soluble cytochrome b562 precursor	Putative soluble cytochrome b562	Soluble cytochrome b562	Residues 1 to 107 of 114 are 99 pct identical to residues 1 to 107 of a 128 aa protein C562_ECOLI sp: P00192 Soluble cytochrome B562 precursor	Probable soluble cytochrome b562 2	cytochrome b(562)	similar to Salmonella typhi CT18 soluble cytochrome b562 soluble cytochrome b562	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pc : putative carrier putative precursor of Cytochrome b(562) (CybC)	Soluble cytochrome b562	conserved hypothetical protein	Code: C; COG: COG3783 cytochrome b(562)	Code: C; COG: COG3783 cytochrome b(562)	soluble cytochrome b562	Code: C; COG: COG3783 cytochrome b(562)	Soluble cytochrome	Putative cytochrome precursor	Soluble cytochrome b562	Cytochrome precursor	Putative cytochrome precursor	Putative Cytochrome b	cytochrome b(562) Code: C; COG: COG3783	Cytochrome precursor	soluble cytochrome b562 precursor	Cytochrome b562 precursor	Cytochrome b(562)	Putative uncharacterized protein	Soluble cytochrome b562	Cytochrome b562 precursor	
ECOLI04086	Anaerobic ribonucleoside-triphosphate reductase- activating protein	Anaerobic ribonucleoside-triphosphate reductase- activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	Probable anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase- activating protein	Probable radical activating enzyme	Organic radical activating enzyme	Anaerobic ribonucleoside-triphosphate reductase- activating protein	Lmo0280 protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	Formate acetyltransferase activating enzyme	putative anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase- activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	Activator protein for anaerobic ribonucleotide reductase	Putative anaerobic ribonucleotide reductase activator	Anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein NrdG	Putative anaerobic ribonucleotide reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase activating protein	Anaerobic ribonucleoside-triphosphate reductase- activating protein	similar to AL591974-85|CAD00807.1| percent identity: 52 in 170 aa putative anaerobic ribonucleoside-triphosphate reductase activating protein	
ECOLI04087	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	NrdD	Oxygen-sensitive ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Putative anaerobic ribonucleoside-triphosphate reductase	Lmo0279 protein	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	putative anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	anaerobic ribonucleoside-triphosphate reductase, putative	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase, putative	Putative anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Putative anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	Anaerobic ribonucleoside-triphosphate reductase	
ECOLI04088	Trehalose-6-phosphate hydrolase	Alpha-glucosidase	Trehalose-6-phosphate hydrolase	Trehalose-6-phosphate hydrolase	Alpha,alpha-phosphotrehalase	Trehalose-6-phosphate hydrolase	Putative dextran glucosidase DexS	Trehalose-6-phosphate hydrolase	Trehalose-6-phosphate hydrolase	alpha,alpha-phosphotrehalase	Putative dextran glucosidase	Alpha, alpha phosphotrehalase	Putative trehalose-6-phosphate hydrolase TreA	Trehalase 6-P hydrolase	Alpha,alpha-phosphotrehalase	Trehalose-6-phosphate hydrolase	Residues 50 to 600 of 600 are 99 pct identical to residues 1 to 551 of a 551 aa protein from Escherichia coli K12 ref: NP_418660.1 trehalase 6-P hydrolase	Putative trehalose-6-phosphate hydrolase	Alpha-glucosidase	Trehalose-6-phosphate hydrolase	Trehalose-6-phosphate hydrolase	A,a-phosphotrehalase	Alpha-glucosidase	InterProMatches:IPR006589, trehalose-6-phosphate hydrolase; Molecular Function: alpha-amylase activity (GO:0004556), Biological Process: carbohydrate metabolism (GO:0005975) Glycoside Hydrolase Family 13	alpha,alpha-phosphotrehalase trehalose-6-phosphate hydrolase	trehalose 6-P hydrolase	trehalose-6-P hydrolase, alternative inducer of maltose system, cytoplasmic	similar to Salmonella typhi CT18 trehalose-6-phosphate hydrolase trehalose-6-phosphate hydrolase	Putative uncharacterized protein gbs0190	
ECOLI04089	PTS system trehalose-specific EIIBC component	PTS system, trehalose-specific IIBC component	PTS system, trehalose-specific IIBC component	Lmo1255 protein	putative PTS system, trehalose-specific IIBCcomponent	PTS system, trehalose-specific IIBC component	Trehalose PTS system, IIABC components	PTS system, trehalose-specific IIBC component	PTS system, trehalose-specific IIbc component	Putative PTS system enzyme II	Putative PTS system, trehalose-specific IIABC component	PTS system, trehalose-specific IIBC component	PTS system enzyme II, trehalose specific	PTS system, trehalose-specific IIBC component	Lin1223 protein	Residues 1 to 473 of 473 are 100 pct identical to residues 1 to 473 of a 473 aa protein from Escherichia coli O157:H7 ref: NP_313244.1 trehalose specific PTS system enzyme II	PTS system, trehalose-specific IIBC component	PTS system, trehalose-specific IIBC component	PTS system, trehalose-specific IIBC component	PTS system, trehalose-specific IIBC component	InterProMatches:IPR004719, IPR001996; Molecular Function: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (GO:0008982), Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system (GO:0009401), Cellular Component: integral to membrane (GO:0016021),Molecu phosphotransferase system (PTS) trehalose-specific enzyme IIBC component	IPR001996: Phosphotransferase system PTS, EIIB domain trehalose-specific IIBC component of PTS system	similar to Salmonella typhi Ty2 trehalose-specific IIBC component of PTS system trehalose-specific IIBC component of PTS system	Putative uncharacterized protein gbs0189	identified by match to PFAM protein family HMM PF00358 PTS system, IIABC components	PTS system, trehalose-specific IIBC component	PTS system, trehalose-specific IIBC component	best blastp match gb|AAK34748.1| (AE006630) putative PTS system enzyme II [Streptococcus pyogenes M1 GAS] putative PTS system enzyme II	identified by similarity to SP:P36672; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826 PTS system, trehalose-specific, IIBC component	
ECOLI04090	HTH-type transcriptional regulator treR	Trehalose operon repressor	putative trehalose operon repressor	Trehalose operon repressor	Trehalose operon repressor	Trehalose operon repressor	Repressor of treA,B,C	Trehalose operon repressor, repressor of treA,B,C	Trehalose operon repressor	Residues 1 to 315 of 315 are 99 pct identical to residues 1 to 315 of a 315 aa protein from Escherichia coli K12 ref: NP_418662.1 repressor of treA,B,C	Trehalose operon repressor	Trehalose operon repressor	IPR000843: Bacterial regulatory protein LacI, HTH motif; IPR001761: Periplasmic binding protein/LacI transcriptional regulator transcriptional repressor of treABC (GalR/LacI family)	similar to Salmonella typhi CT18 trehalose operon repressor trehalose operon repressor	Trehalose operon repressor	Transcriptional regulators PurR protein	HTH-type transcriptional regulator treR	Code: K; COG: COG1609 repressor of treA,B,C	repressor of treA,B,C; Code: K; COG: COG1609 treR	Code: K; COG: COG1609 repressor of treA,B,C	Trehalose operon repressor	Trehalose operon repressor	Trehalose operon repressor	Trehalose operon repressor	trehalose operon repressor identified by match to protein family HMM PF00356; match to protein family HMM PF00532; match to protein family HMM TIGR02405	Trehalose operon repressor	Trehalose operon repressor	putative sucrose operon repressor (LacI-family transcriptional regulator)	repressor of treA,B,C Code: K; COG: COG1609	
ECOLI04091	Magnesium-transporting ATPase, P-type 1	Mg(2+) transport ATPase, P-type 1	Mg(2+) transport ATPase, P-type	Mg2+ transport ATPase protein B	Mg(2+) transport ATPase, P-type 1	Cation transport ATPase	Mg(2+) transport ATPase	Magnesium-transporting ATPase, P-type 1	Mg2+ transport ATPase	Mg(2+) transport ATPase, P-type 2	Mg2+ transport ATPase	Magnesium transport P-type atpase	Residues 1 to 851 of 851 are 99 pct identical to residues 48 to 898 of a 898 aa protein from Escherichia coli O157:H7 ref: NP_313246.1 Mg2+ transport ATPase	conserved gene magnesium-transporting ATPase, P-type	Cation-transporting ATPase	COG0474 Cation transport ATPase cation transporter P-ATPase	Cation-transporting P-ATPase	IPR000695: H+ transporting ATPase, proton pump; IPR001757: ATPase, E1-E2 type; IPR006069: Cation transporting ATPase P-type ATPase, Mg2+ ATPase transporter	identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524 magnesium-translocating P-type ATPase	Magnesium-translocating P-type ATPase	Similar to Salmonella typhimurium Mg2+ transporter MgtA or STM4456 SWALL:ATMA_SALTY (SWALL:P36640) (902 aa) fasta scores: E(): 1.6e-170, 52.17% id in 874 aa, and to Bacteroides thetaiotaomicron Mg2+ transport ATPase protein B BT0988 SWALL:AAO76095 (EMBL:AE016930) (883 aa) fasta scores: E(): 0, 78.95% id in 884 aa, and to Escherichia coli, and Escherichia coli O157:H7 Mg2+ transporter MgtA or Mgt or CorB or B4242 or Z5853 or ECS5219 SWALL:ATMA_ECOLI (SWALL:P39168) (898 aa) fasta scores: E(): 1.6e-171, 52.34% id in 873 aa putative Mg2+ transport ATPase protein	Magnesium-transporting ATPase, P-type 1	identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524 magnesium-translocating P-type ATPase	ATPase, E1-E2 type:Magnesium-translocating P-type ATPase	ATPase, E1-E2 type:Magnesium-translocating P-type ATPase	Code: P; COG: COG0474 Mg2+ transport ATPase, P-type 1	magnesium transport P-type atpase	P-type 1; Code: P; COG: COG0474 Mg2+ transport ATPase	Magnesium-translocating P-type ATPase	
ECOLI04092	UPF0076 protein yjgF	Bll1462 protein	UPF0076 protein HI0719	Hypothetical 14.5 kDa translational inhibitor protein	UPF0076 protein PM1466	Putative translation initiation inhibitor	Putative uncharacterized protein yjgF	Putative uncharacterized protein	Putative translation initiation inhibitor	UPF0076 protein yjgF	Putative uncharacterized protein	Putative endoribonuclease	UPF0076 protein BUsg_359	Endoribonuclease L-PSP, putative	Putative uncharacterized protein VP2656	Putative uncharacterized protein yjgF	Putative translation initiation inhibitor	Residues 12 to 152 of 152 are 100 pct identical to residues 1 to 141 of a 141 aa protein from Escherichia coli O157:H7 ref: NP_313247.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YjgF of Escherichia coli	Translation initiation inhibitor protein	IPR006056: YjgF-like protein putative translation initiation inhibitor	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Similar to: HI0719, YJGF_HAEIN putative translation initiation inhibitor, YjgF family	Putative translation initiation inhibitor TdcF protein	Putative translation initiation inhibitor	conserved hypothetical protein	Code: J; COG: COG0251 conserved hypothetical protein	
ECOLI04093	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	hypothetical aspartate carbamoyltransferase regulatory subunit	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	putative aspartate carbamoyltransferase, regulatory subunit	Aspartate carbamoyltransferase regulatory chain	aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	Aspartate carbamoyltransferase regulatory chain	
ECOLI04094	Aspartate carbamoyltransferase catalytic chain	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	hypothetical aspartate carbamoyltransferase catalytic subunit	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase catalytic chain	Aspartate carbamoyltransferase	Aspartate carbamoyltransferase	
ECOLI04096	UPF0076 protein yjgH	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	glimmer prediction conserved hypothetical protein	Endoribonuclease L-PSP family protein	Putative uncharacterized protein	hypothetical protein	Putative uncharacterized protein yjgH	hypothetical protein, contains similarity to translation initiation inhibitor	Possible translation initiation inhibitor	Residues 29 to 159 of 159 are 98 pct identical to residues 1 to 131 of a 131 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290881.1 orf, conserved hypothetical protein	Hypothetical transmembrane protein	Translation initiation inhibitor protein	Putative uncharacterized protein	translation initiation inhibitor Endoribonuclease L-PSP family protein	Putative translation initiation inhibitor	conserved hypothetical protein	identified by match to protein family HMM PF01042 endoribonuclease, L-PSP family	identified by match to protein family HMM PF01042 possible translation initiation inhibitor	Code: J; COG: COG0251 conserved hypothetical protein	Code: J; COG: COG0251 conserved hypothetical protein	Endoribonuclease L-PSP	Endoribonuclease L-PSP	Endoribonuclease L-PSP	Endoribonuclease L-PSP	Endoribonuclease L-PSP	
ECOLI04097	Uncharacterized oxidoreductase yjgI	Oxidoreductase	Putative oxidoreductase	Residues 1 to 237 of 237 are 99 pct identical to residues 1 to 237 of a 237 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290882.1 putative oxidoreductase	Oxidoreductase	Code: IQR; COG: COG1028 putative oxidoreductase	Code: IQR; COG: COG1028 putative oxidoreductase	Code: IQR; COG: COG1028 putative oxidoreductase	putative short chain dehydrogenase	putative oxidoreductase Code: IQR; COG: COG1028	short-chain dehydrogenase/reductase SDR	Putative short-chain alcohol dehydrogenas	Oxidoreductase, short chain dehydrogenase/reductase family	Predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain	Oxidoreductase, short chain dehydrogenase/reductase family	Short-chain dehydrogenase/reductase SDR	Oxidoreductase, short chain dehydrogenase/reductase family	Oxidoreductase, short chain dehydrogenase/reductase family	Short-chain dehydrogenase/reductase SDR	Oxidoreductase, short chain dehydrogenase/reductase family	Putative oxidoreductase	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	Predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain	Putative oxidoreductase with NAD(P)-binding Rossmann-fold domain	YjgI protein	Predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain	Predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain	
ECOLI04098	Uncharacterized HTH-type transcriptional regulator yjgJ	Putative uncharacterized protein	Putative transcriptional regulator	Product confidence : putative Gene name confidence : hypothetical putative transcriptional regulator protein	Putative transcriptional regulator	probable transcriptional regulator	SC7A8.28, probable tetR-family transcriptional regulator, len: 194 aa; similar to TR:CAB53122 (EMBL:AL109962) Streptomyces coelicolor putative transcriptional regulatory protein SCJ1.04, aa; fasta scores: opt: 184 z-score: 231.2 E(): 1.7e-05; 30.9% identity in 162 aa overlap and to SW:YCFQ_ECOLI (EMBL:AE000211) Escherichia coli hypothetical transcriptional regulator in NDH-MFD intergenic region YcfQ, 210 aa; fasta scores: opt: 282 z-score: 348.3 E(): 5.2e-12; 32.3% identity in 192 aa overlap. Contains Pfam match to entry PF00440 tetR, Bacterial regulatory proteins, tetR family and possible helix-turn-helix motif at residues 28..49 (+3.04 SD) putative tetR-family transcriptional regulator	Residues 1 to 197 of 197 are 96 pct identical to residues 1 to 197 of a 197 aa protein YJGJ_ECOLI sp: P39334 orf, conserved hypothetical protein	Similar to transcriptional regulator	probable transcriptional regulator (TetR family)	putative bacterial regulatory helix-turn-helix proteins, araC family	similar to Salmonella typhi CT18 putative transcriptional regulator putative transcriptional regulator	Putative uncharacterized protein	Putative AraC family bacterial regulatory helix- turn-helix protein	Transcriptional regulator, TetR family	putative transcriptional regulator, TetR family	transcriptional regulator, TetR family PFAM: HMG-I and HMG-Y, DNA-binding: (0.062) regulatory protein, TetR: (4.8e-11) KEGG: rpb:RPB_4262 transcriptional regulator, TetR family, ev=5e-24, 35% identity	Transcriptional regulator, TetR family	transcriptional regulator, TetR family PFAM: regulatory protein, TetR KEGG: bcn:Bcen_4420 transcriptional regulator, TetR family	putative TetR-family transcriptional regulator	transcriptional regulator, TetR family	conserved hypothetical protein Code: K; COG: COG1309	Transcriptional regulator, TetR family protein	Transcriptional regulator, TetR family	putative transcriptional regulator, TetR family KEGG: son:SO1578 transcriptional regulator, TetR family	transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Putative bacterial regulatory protein, TetR	
ECOLI04099	Uncharacterized protein yjgK	Putative uncharacterized protein VV1161	Putative uncharacterized protein STY4806	conserved hypothetical protein	Protein yjgK	Putative uncharacterized protein	Putative uncharacterized protein VC1555	Putative uncharacterized protein	Putative uncharacterized protein yjgK	Putative uncharacterized protein	Residues 1 to 153 of 153 are 99 pct identical to residues 1 to 153 of a 153 aa protein from Escherichia coli K12 ref: NP_418673.1 orf, conserved hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	Conserved hypothetical protein	conserved hypothetical protein	Putative cytoplasmic protein	Code: G; COG: COG2731 conserved hypothetical protein	Code: G; COG: COG2731; orf conserved hypothetical protein	Putative cytoplasmic protein YjgK	Hypothetical protein	Putative uncharacterized protein yjgK	Hypothetical protein	conserved hypothetical protein identified by similarity to GB:CAG73302.1; match to protein family HMM PF04074; match to protein family HMM TIGR00022	Hypothetical protein	Hypothetical protein	conserved hypothetical protein Code: G; COG: COG2731	Hypothetical protein	
ECOLI04100	Uncharacterized protein yjgL	Predicted protein	Putative uncharacterized protein	Putative uncharacterized protein	pseudo	Putative uncharacterized protein	YjgL protein	Predicted protein	Predicted protein	pseudo conserved predicted protein, C-terminal part	Putative uncharacterized protein	
ECOLI04101	Ornithine carbamoyltransferase chain I	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Residues 1 to 334 of 337 are 99 pct identical to residues 1 to 334 of a 334 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290887.1 ornithine carbamoyltransferase 1	IPR002082: Aspartate carbamoyltransferase; IPR002292: Ornithine carbamoyltransferase; IPR006130: Aspartate/ornithine carbamoyltransferase ornithine carbamoyltransferase 1	similar to Salmonella typhi CT18 ornithine carbamoyltransferase ornithine carbamoyltransferase	Ornithine carbamoyltransferase ArgF protein	Ornithine carbamoyltransferase	Code: E; COG: COG0078 ornithine carbamoyltransferase 1	Code: E; COG: COG0078 ornithine carbamoyltransferase 1	ornithine carbamoyltransferase chain I	Code: E; COG: COG0078 ornithine carbamoyltransferase 1	Ornithine carbamoyltransferase chain I	ornithine carbamoyltransferase identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658	ornithine carbamoyltransferase 1 Code: E; COG: COG0078	ornithine carbamoyltransferase 1	Ornithine carbamoyltransferase	Putative uncharacterized protein	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase 1	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Ornithine carbamoyltransferase	Putative uncharacterized protein	Ornithine carbamoyltransferase	
ECOLI04102	Uncharacterized protein yjgD	Putative uncharacterized protein	Putative uncharacterized protein VV2916	Uncharacterized protein yjgD	conserved hypothetical protein	Hypothetical protein yjgD	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein VP2650	Uncharacterized protein yjgD	Uncharacterized protein conserved in bacteria	Residues 1 to 138 of 138 are 100 pct identical to residues 1 to 138 of a 138 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290888.1 orf, conserved hypothetical protein	Putative uncharacterized protein	Similar to unknown protein YjgD of Escherichia coli	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein	hypothetical cytosolic protein	Similar to: HI0700, YJGD_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	Uncharacterized conserved protein	Uncharacterized protein yjgD	identified by similarity to SP:Q08019 conserved hypothetical protein	conserved hypothetical protein	Code: S; COG: COG3076 conserved hypothetical protein	Evidence 4 : Homologs of previously reported genes of unknown function conserved protein of unknown function	Code: S; COG: COG3076 conserved hypothetical protein	conserved hypothetical protein	
ECOLI04103	Uncharacterized N-acetyltransferase yjgM	Histone acetyltransferase HPA2	Putative acetyltransferase	Alr2925 protein	Putative uncharacterized protein	Hypothetical protein	Putative uncharacterized protein	Putative acetyltransferase	Putative acetyltransferase	CDS_ID OB3096 hypothetical protein	similar to AE008910-1|AAL23292.1| percent identity: 43 in 160 aa conserved hypothetical protein	Predicted acetyltransferase	Histone acetyltransferase HPA2	Residues 1 to 167 of 167 are 96 pct identical to residues 1 to 167 of a 167 aa protein YJGM_ECOLI sp: P39337 orf, conserved hypothetical protein	Putative acetyltransferase	putative acetyltransferase	putative acetyltransferase	similar to Salmonella typhi CT18 putative acetyltransferase putative acetyltransferase	Putative uncharacterized protein gbs1409	identified by match to PFAM protein family HMM PF00583 acetyltransferase, GNAT family	Putative acetyltransferase	IAA acetyltransferase	Uncharacterized N-acetyltransferase yjgM	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	acetyltransferase (GNAT) family protein	Code: KR; COG: COG0454 putative acetyltransferase	GCN5-related N-acetyltransferase	Histone acetyltransferase HPA2/related acetyltransferase COG0454	
ECOLI04104	Inner membrane protein yjgN	Predicted membrane protein	Putative innner membrane protein	Putative membrane protein	Inner membrane protein yjgN	Predicted membrane protein	Residues 1 to 407 of 407 are 97 pct identical to residues 1 to 407 of a 407 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290890.1 orf, conserved hypothetical protein	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative innner membrane protein putative innner membrane protein	Putative membrane protein	Inner membrane protein yjgN	Heat shock protein DnaJ, N-terminal:Protein of unknown function DUF898, transmembrane bacterial	Code: S; COG: COG4269 conserved hypothetical protein	Code: S; COG: COG4269 conserved hypothetical protein	Protein of unknown function DUF898	Putative membrane protein YjgN	Putative membrane protein	Hypothetical protein	Putative inner membrane protein	protein of unknown function DUF898, transmembrane PFAM: protein of unknown function DUF898, transmembrane KEGG: rso:RSc0643 probable transmembrane protein	Hypothetical protein	Membrane protein	protein of unknown function DUF898	conserved hypothetical protein Code: S; COG: COG4269	Membrane protein	putative inner membrane protein	protein of unknown function DUF898, transmembrane PFAM: protein of unknown function DUF898, transmembrane KEGG: rme:Rmet_2800 protein of unknown function DUF898, transmembrane	Putative membrane protein	
ECOLI04105	Valyl-tRNA synthetase	Mitochondrial and cytoplasmic valyl-tRNA synthetase.  [Source:SGD;Acc:S000003326]	Valyl-tRNA synthetase	highly similar to sp|P07806 Saccharomyces cerevisiae YGR094w VAS1 valyl-tRNA synthetase, start by similarity	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	DEHA2C07722p;highly similar to uniprot|P07806 Saccharomyces cerevisiae YGR094w VAS1 valyl-tRNA synthetase;	Valyl-tRNA synthetase	identified by match to PFAM protein family HMM PF03096 valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	Valyl-tRNA synthetase	
ECOLI04106	DNA polymerase III subunit chi	DNA polymerase III holoenzyme chi subunit	DNA polymerase III subunit chi	HolC	DNA polymerase III subunit chi	DNA polymerase III, chi subunit	DNA polymerase III, chi subunit	DNA polymerase III, chi subunit	DNA polymerase III, chi subunit	Putative uncharacterized protein	Putative uncharacterized protein	DNA polymerase III, chi subunit	DNA polymerase III, chi subunit	DNA polymerase III, chi subunit	Putative uncharacterized protein	DNA polymerase III, chi subunit	DNA polymerase III, chi subunit	DNA polymerase III, chi subunit	Residues 1 to 160 of 160 are 93 pct identical to residues 1 to 160 of a 160 aa protein from Salmonella typhimurium LT2 ref: NP_463336.1 DNA polymerase III, chi subunit	DNA polymerase III, chi subunit	DNA polymerase III, chi subunit	Similar to DNA polymerase III, chi subunit hypothetical protein	conserved gene DNA polymerase III, chi subunit	Similar to DNA polymerase III, chi subunit hypothetical protein	DNA polymerase III holoenzyme chi subunit	DNA polymerase III, chi subunit	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark DNA polymerase III holoenzyme chi subunit	DNA polymerase III, chi subunit	similar to Salmonella typhi CT18 DNA polymerase III, chi subunit DNA polymerase III, chi subunit	
ECOLI04107	Cytosol aminopeptidase	Putative aminopeptidase C13A11.05 [Source:GeneDB_Spombe;Acc:SPAC13A11.05]	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	CYTOSOL AMINOPEPTIDASE (X-LEU/X-PRO);10_1770i, CYTOSOL AMINOPEPTIDASE (X-LEU/X-PRO), AMPA_RICPR, YA55_SCHPO, gene found by Glimmer [Bad Olap 196 149 0], modified ATG by annotation;	Cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	Probable cytosol aminopeptidase	putative aminopeptidase A/I	Cytosol aminopeptidase	identified by match to protein family HMM PF00883; match to protein family HMM PF02789 cytosol aminopeptidase	similar to GP:15074087, GB:J03483, GB:J03915, GB:U03742, GB:U03743, GB:U03744, GB:U03748, GB:U03745, GB:U03746, GB:U03747, GB:U03749, and SP:P10645; identified by sequence similarity; putative cytosol aminopeptidase family protein	
ECOLI04108	Lipopolysaccharide export system permease protein lptF	Putative uncharacterized protein	Lipopolysaccharide export system permease protein lptF	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted permease	Hypothetical membrane spanning protein	Putative uncharacterized protein	Putative inner membrane protein	Putative permease protein	putative permease	Inner membrane protein yjgP	similar to GP:15074086; identified by sequence similarity; putative membrane protein, putative	Putative uncharacterized protein	Putative integral membrane protein	Putative integral membrane protein	Putative uncharacterized protein	Putative permease	Membrane protein, putative	Putative integral membrane protein	Permease, putative	Hypothetical Membrane Spanning Protein	Putative permease	Lipopolysaccharide export system permease protein lptF	unknown protein	Membrane protein, putative	Hypothetical membrane spanning protein	
ECOLI04109	Lipopolysaccharide export system permease protein lptG	Putative uncharacterized protein	Lipopolysaccharide export system permease protein lptG	Putative permease	Possible permease	Putative uncharacterized protein	Putative uncharacterized protein	Predicted permease	Putative uncharacterized protein	Putative inner membrane protein	Putative uncharacterized protein	Putative permease protein	putative permease	Inner membrane protein yjgQ	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative membrane protein	Putative uncharacterized protein	Putative permease	Putative membrane protein	hypothetical protein	Membrane protein, putative	Putative permease	Putative uncharacterized protein yjgQ	Hypothetical membrane spanning protein	Predicted permease	Putative uncharacterized protein RP769	Putative uncharacterized protein	
ECOLI04110	Uncharacterized protein yjgR	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical protein yjgR	identified by match to PFAM protein family HMM PF01580 conserved hypothetical protein	Conserved ATP-binding protein	Conserved ATP-binding protein	Putative uncharacterized protein	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	Conserved ATP-binding protein	Putative uncharacterized protein	Putative uncharacterized protein	ATPase	Putative uncharacterized protein yjgR	hypothetical protein	Putative uncharacterized protein	ATPase	Putative uncharacterized protein	Residues 17 to 516 of 516 are 98 pct identical to residues 1 to 500 of a 500 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290896.1 orf, conserved hypothetical protein	Predicted ATPase	Putative uncharacterized protein	Putative predicted atpase protein	similar to conserved hypothetical protein hypothetical protein	conserved gene hypothetical protein	similar to conserved hypothetical protein hypothetical protein	
ECOLI04111	HTH-type transcriptional regulator idnR	L-idonate Regulatory protein	IPR000843: Bacterial regulatory protein LacI, HTH motif; IPR001761: Periplasmic binding protein/LacI transcriptional regulator L-idonate regulator (GalR/LacI family)	similar to Salmonella typhi CT18 regulatory protein regulatory protein	Putative LacI-family transcriptional regulatory protein	L-idonate regulator	identified by match to protein family HMM PF00356; match to protein family HMM PF00532 sugar-binding transcriptional regulator, LacI family	Code: K; COG: COG1609 L-idonate transcriptional regulator	HTH-type transcriptional regulator IdnR	L-idonate regulatory protein	L-idonate regulatory protein	Regulatory protein LacI	DNA-binding transcriptional repressor, 5- gluconate-binding	L-idonate regulatory protein	Transcriptional regulator IdnR	Transcriptional regulator IdnR	Putative uncharacterized protein	Transcriptional regulator, LacI family	Regulatory protein	HTH-type transcriptional regulator IdnR	HTH-type transcriptional regulator IdnR	HTH-type transcriptional regulator IdnR	Regulatory protein	Sugar binding transcriptional regulator, LacI family	HTH-type transcriptional regulator IdnR	HTH-type transcriptional regulator IdnR	Regulatory protein	DNA-binding transcriptional repressor, 5- gluconate-binding	DNA-binding transcriptional repressor, 5- gluconate-binding	
ECOLI04112	Gnt-II system L-idonate transporter	pseudo	Gnt-II system L-idonate transporter	Gluconate permease	GntP family, L-idonate transport protein	similar to Salmonella typhimurium GntP family, L-idonate transport protein GntP family, L-idonate transport protein	GntP family L-idonate transport protein	Code: GE; COG: COG2610 L-idonate transporter	Gnt-II system L-idonate transporter	IdnT L-idonate Gnt tranporter	H+/gluconate symporter related permease	L-idonate and D-gluconate transporter	Gluconate permease family protein	gluconate transport protein	L-idonate and D-gluconate transporter	Gnt-II system L-idonate transporter	Gnt-II system L-idonate transporter	Putative uncharacterized protein	Gluconate transporter	GntP family, L-idonate transport protein	Transporter, gluconate:H+ symporter (GntP) family	Transporter, gluconate:H+ symporter (GntP) family	Transporter, gluconate:H+ symporter (GntP) family	Gnt-ii system l-idonate transporter	Transporter, gluconate:H+ symporter (GntP) family	Transporter, gluconate:H+ symporter (GntP) family	Gnt-ii system l-idonate transporter	L-idonate and D-gluconate transporter	L-idonate and D-gluconate transporter	
ECOLI04113	Gluconate 5-dehydrogenase	Gluconate 5-dehydrogenase	IPR002198: Short-chain dehydrogenase/reductase SDR; IPR002347: Glucose/ribitol dehydrogenase; IPR003560: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 5-keto-D-gluconate-5-reductase	similar to Salmonella typhimurium 5-keto-D-gluconate-5-reductase 5-keto-D-gluconate-5-reductase	Gluconate 5-dehydrogenase	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) FabG protein	5-keto-D-gluconate-5-reductase	Code: IQR; COG: COG1028 5-keto-D-gluconate 5-reductase	Gluconate 5-dehydrogenase	Gluconate 5-dehydrogenase	5-keto-D-gluconate 5-reductase	Gluconate 5-dehydrogenase	Gluconate 5-dehydrogenase	Gluconate 5-dehydrogenase	gluconate 5-dehydrogenase	Short-chain dehydrogenase/reductase SDR	5-keto-D-gluconate-5-reductase	Gluconate 5-dehydrogenase	Gluconate 5-dehydrogenase	Gluconate 5-dehydrogenase	Short-chain dehydrogenase/reductase SDR	Putative uncharacterized protein	Putative uncharacterized protein	Short-chain dehydrogenase/reductase SDR	Short-chain dehydrogenase/reductase SDR	Gluconate 5-dehydrogenase	Gluconate 5-dehydrogenase	5-keto-D-gluconate-5-reductase	Gluconate 5-dehydrogenase	
ECOLI04114	L-idonate 5-dehydrogenase	Putative L-idonate 5-dehydrogenase	L-idonate 5-dehydrogenase	go_function: L-iditol 2-dehydrogenase activity [goid 0003939]; go_process: fructose metabolism [goid 0006000]; go_process: mannose metabolism [goid 0006013] xylitol dehydrogenase, putative	SCI30A.03, probable zinc-binding alcohol dehydrogenase, len: 358 aa; similar to many both prokaryote and eukaryote e.g. SW:DHSO_BACSU sorbitol dehydrogenase from Bacillus subtilis (352 aa) fasta scores; opt: 616, z-score: 638.0, E(): 3.3e-28, (32.7% identity in 352 aa overlap) and DHSO_SHEEP sorbitol dehydrogenase from Ovis aries (sheep) (354 aa) fasta scores; opt: 606, z-score: 627.7, E(): 1.2e-27, (34.6% identity in 344 aa overlap). Conatins Pfam match to entry PF00107 adh_zinc, Zinc-binding dehydrogenases. putative zinc-binding alcohol dehydrogenase	Putative l-idonate 5-dehydrogenase oxidoreductase protein	L-idonate 5-dehydrogenase	similar to Salmonella typhimurium L-idonate 5-dehydrogenase L-idonate 5-dehydrogenase	Threonine dehydrogenase and related Zn-dependent dehydrogenases Tdh protein	L-idonate 5-dehydrogenase	Code: ER; COG: COG1063 L-idonate dehydrogenase	Zinc-containing alcohol dehydrogenase superfamily	Ribitol-5-phosphate 2-dehydrogenase COG1063 [ER] Threonine dehydrogenase and related Zn-dependent dehydrogenases	Alcohol dehydrogenase GroES-like	L-idonate 2-dehydrogenase	L-idonate 5-dehydrogenase	Alcohol dehydrogenase GroES-like	Alcohol dehydrogenase, zinc-binding domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: sil:SPO2424 L-idonate 5-dehydrogenase	Alcohol dehydrogenase GroES domain protein	Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: bur:Bcep18194_A3728 zinc-containing alcohol dehydrogenase superfamily	Alcohol dehydrogenase, zinc-binding domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: sco:SCO1682 L-idonate 5-dehydrogenase	Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Methyltransferase type 11 KEGG: bja:blr5278 IdnD L-idonate 5-dehydrogenase	L-idonate 5-dehydrogenase, NAD-binding	L-idonate 5-dehydrogenase, NAD-binding	L-idonate 5-dehydrogenase	L-idonate 5-dehydrogenase	Putative Sorbitol dehydrogenase	Putative zinc-binding alcohol dehydrogenase	Alcohol dehydrogenase GroES domain protein	
ECOLI04115	Thermosensitive gluconokinase	Thermoresistant gluconokinase	Gluconate kinase	Thermosensitive gluconokinase	Thermoresistant gluconokinase	Putative kinase	Putative transferase	Thermoresistant gluconokinase	Thermoresistant gluconokinase	Gluconokinase	D-gluconate kinase, thermosensitive	similar to Salmonella typhimurium D-gluconate kinase, thermosensitive D-gluconate kinase, thermosensitive	Gluconate kinase GntK protein	Thermosensitive D-gluconate kinase	thermosensitive glucokinase; Code: G; COG: COG3265 gluconate kinase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14973046; Product type e : enzyme putative D-gluconate kinase active at low temperature (idonate catabolism)	Thermosensitive gluconokinase	Carbohydrate kinase, thermoresistant glucokinase	Gluconokinase	shikimate kinase identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313	thermosensitive gluconokinase identified by similarity to SP:P39208; match to protein family HMM PF01202; match to protein family HMM TIGR01313	transcript_id=ENSSART00000001343	Thermoresistant gluconokinase	Hypothetical protein	carbohydrate kinase, thermoresistant glucokinase family protein KEGG: pha:PSHAb0480 putative D-gluconate kinase active at low temperature (idonate catabolism) TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family PFAM: shikimate kinase	thermosensitive gluconokinase	transcript_id=ENSOPRT00000014167	Putative uncharacterized protein	Carbohydrate kinase, thermoresistant glucokinase family	
ECOLI04116	Uncharacterized zinc-type alcohol dehydrogenase- like protein yjgB	Zn-dependent alcohol dehydrogenases	Hypothetical zinc-type alcohol dehydrogenase-like protein yjgB	Probable alcohol dehydrogenase	Putative zinc-binding dehydrogenase	PMID: 87304248 PMID: 92277668 best DB hits: BLAST: pir:S76928; probable aryl alcohol dehydrogenase (EC 1.1.1.-) -; E=1e-94 pir:S56495; probable aryl alcohol dehydrogenase (EC 1.1.1.-) yjgB -; E=6e-71 swissprot:P27250; YJGB_ECOLI HYPOTHETICAL ZINC-TYPE ALCOHOL; E=6e-71 COG: slr1192; COG1064 Zn-dependent alcohol dehydrogenases; E=9e-96 PFAM: PF00899; ThiF family; E=0.48 PF02826; D-isomer specific 2-hydroxyacid; E=0.48 PF00107; Zinc-binding dehydrogenases; E=5.9e-85 hypothetical zinc-type alcohol dehydrogenase-like protein yjgB	Putative oxidoreductase	Residues 1 to 339 of 339 are 99 pct identical to residues 1 to 339 of a 339 aa protein YJGB_ECOLI sp: P27250 orf, conserved hypothetical protein	AdhA_2	IPR000345: Cytochrome c heme-binding site; IPR002328: Zinc-containing alcohol dehydrogenase; IPR006140: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain putative alcohol dehydrogenase	similar to Salmonella typhimurium putative alcohol dehydrogenase putative alcohol dehydrogenase	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative alcohol dehydrogenase	Putative alcohol dehydrogenase	go_component: soluble fraction [goid 0005625]; go_function: alcohol dehydrogenase (NADP+) activity [goid 0008106]; go_process: alcohol metabolism [goid 0006066] alcohol dehydrogenase, putative	Code: R; COG: COG1064 putative oxidoreductase	Code: R; COG: COG1064 putative oxidoreductase	Alcohol dehydrogenase superfamily, zinc- containing	oxidoreductase, zinc-binding dehydrogenase family identified by match to protein family HMM PF00107	zinc-containing alcohol dehydrogenase superfamily	Alcohol dehydrogenase GroES-like	Zinc-containing alcohol dehydrogenase superfamily	Code: R; COG: COG1064 putative oxidoreductase	Hypothetical zinc-type alcohol dehydrogenase-like protein YjgB	zinc-containing alcohol dehydrogenase family	Alcohol dehydrogenase, zinc-binding	Putative oxidoreductase	zinc-type alcohol dehydrogenase	Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: pfo:Pfl_2347 zinc-containing alcohol dehydrogenase superfamily	aldehyde dehydrogenase family protein identified by match to protein family HMM PF00107	

ECOLI04117	Putative prophage P4 integrase	symbiosis island integrase	Residues 13 to 406 of 415 are 91 pct identical to residues 1 to 394 of a 419 aa protein from Yersinia pestis ref: NP_406899.1 integrase	Integrase	Integrase	pseudo	in addition to BLAST hits ... contains the applicable subsitutions in the R-H-R-Y motif identified by Nunes-Duby et al 1998 Phage integrase	Code: L; COG: COG0582 prophage P4 integrase	putative phage integrase	Phage integrase	Prophage P4 integrase	Integrase	Prophage P4 integrase	Integrase	Putative Phage integrase	Putative integrase	putative P4-type integrase Code: L; COG: COG0582	Integrase	Phage integrase family protein	Putative phage integrase	Putative uncharacterized protein	Phage integrase family protein	Integrase family protein	KpLE2 phage-like element; predicted integrase	Site-specific recombinase, phage integrase family	Symbiosis island integrase	Site-specific recombinase, phage integrase family	Integrase family protein	

ECOLI01533	pseudo	Code: L; COG: COG2801 IS2 ORF2	
ECOLI04118	Putative uncharacterized protein yjgW	


ECOLI04120	Transposase insG for insertion sequence element IS4	Transposase and inactivated derivative	Transposase insG for insertion sequence element IS4	IS4-like transposase	Transposase	protein containing transposase DDE domain	Truncated transposase InsG	hypothetical protein similarity to COG3385 Predicted transposase	transposase, IS4	putative transposase, IS4 family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme	Transposase IS4 family protein	Transposase, IS4 family protein	PFAM: transposase IS4 family protein KEGG: son:SO_3544 ISSod7, transposase transposase IS4 family protein	Protein containing transposase DDE domain	Transposase IS4 family protein	KpLE2 phage-like element; IS4 predicted transposase	Transposase, IS4 family protein	Transposase IS4 family protein	Transposase IS4 family protein	Putative IS4 transposase; KpLE2 phage-like element	Putative transposase, IS4 family	InsG protein	Transposase IS4 family protein	Transposase insg for insertion sequence element is4	Transposase IS4 family protein	KpLE2 phage-like element; IS4 predicted transposase	Transposase IS4 family protein	Transposase, IS4 family	IS4 predicted transposase	
ECOLI04121	Putative metabolite transport protein yjhB	Putative transporter	Major facilitator family transporter	General substrate transporter	Major facilitator superfamily (MFS_1) transporter	carboxylic acid transporter protein carboxylic acid transporter protein (JEN1); go_component: integral to membrane; go_function: transporter activity; go_process: transport	ustilago_maydis hypothetical protein	Major facilitator superfamily MFS_1	Major facilitator superfamily MFS_1	KpLE2 phage-like element; predicted transporter	Major facilitator superfamily MFS_1	Major facilitator superfamily MFS_1	Putative metabolite transport protein YjhB	Putative transporter	Major facilitator superfamily MFS_1	Putative transporter; KpLE2 phage-like element	Putative transporter; KpLE2 phage-like element	Putative transporter; KpLE2 phage-like element	YjhB protein	KpLE2 phage-like element; predicted transporter	major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: glo:Glov_3237 major facilitator superfamily MFS_1	General substrate transporter	
ECOLI04122	Uncharacterized oxidoreductase yjhC	Uncharacterized oxidoreductase sll0816	3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related protein	Putative oxidoreductase	Probable dehydrogenase	Putative uncharacterized protein	Oxidoreductase, Gfo/Idh/MocA family	Putative oxidoreductase	All4106 protein	Lmo2159 protein	oxidoreductase	Uncharacterized oxidoreductase SP_1686	Product confidence : putative Gene name confidence : hypothetical putative oxidoreductase protein	Putative myo-inositol 2-dehydrogenase	1-CARBOXY-3-CHLORO-3,4-DIHYDROXYCYCLO HEXA-1,5- DIENE DEHYDROGENASE	Dehydrogenase	Lin2262 protein	hypothetical protein	Oxidoreductase family	probable oxidoreductase	Putative uncharacterized protein	Oxidoreductase protein	NADH-dependent dyhydrogenase	IPR000683: Oxidoreductase, N-terminal; IPR000847: Bacterial regulatory protein LysR, HTH motif; IPR004104: Oxidoreductase, C-terminal putative dehydrogenases and related proteins	similar to Salmonella typhi CT18 putative oxidoreductase putative oxidoreductase	similar to BRA0403, oxidoreductase, Gfo/Idh/MocA family oxidoreductase, Gfo/Idh/MocA family	identified by match to protein family HMM PF01408; match to protein family HMM PF02894 oxidoreductase, Gfo/Idh/MocA family	Probable Oxidoreductase, GFO/IDH/MOCA family Conserved hypothetical protein	Oxidoreductase, putative	
ECOLI04124	Putative uncharacterized protein yjhD	Putative uncharacterized protein yjhD	YjhD protein	Putative uncharacterized protein	
ECOLI04125	Putative uncharacterized protein yjhE	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI04126	Transposase insN for insertion sequence element IS911B	ISPsy13, transposase OrfA	Transposase, putative	transposase InsN for insertion sequence element IS911B	KpLE2 phage-like element; partial regulator of insertion element IS911B	transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein; KEGG: mlo:msr5972 transposase	pseudo	InsN-2 protein	IS911 protein	pseudo	
ECOLI04127	Transposase insI for insertion sequence element IS30B/C/D	Transposase	Putative transposase	Transposase insI for insertion sequence element IS30B/C/D	glimmer prediction; similarity to integrase core domain TRm24 transposase	Transposase, ISlxx5	Putative uncharacterized protein	Putative uncharacterized protein gbs0208	Similar to Bacteroides fragilis transposase for insertion sequence element IS4351 SWALL:TRA4_BACFR (SWALL:P37247) (326 aa) fasta scores: E(): 6.7e-44, 45% id in 320 aa, to Neisseria meningitidis putative transposase for IS1655 NMA1486 and NMA1481 SWALL:Q9JS36 (EMBL:AL162756) (321 aa) fasta scores: E(): 3.7e-36, 39.55% id in 316 aa, and to Alcaligenes eutrophus transposase for insertion sequence element IS1086 SWALL:TRA8_ALCEU (SWALL:P37248) (339 aa) fasta scores: E(): 3.3e-20, 33.33% id in 327 aa putative IS element	transposase for IS1513e	Integrase, catalytic region	similar to gi|2673748|emb|CAA05973.1| [Lactobacillus casei], percent identity 49 in 332 aa, BLASTP E(): 2e-77 transposase	Integrase	Integrase, catalytic region PFAM: Integrase, catalytic region KEGG: pfo:Pfl_2765 integrase, catalytic region	Integrase, catalytic region	putative transcriptional regulator, Fis family	Integrase	Integrase, catalytic region	Transposase, IS30 family	transposase, putative	Putative transposase IS30	Transposase	Hypothetical protein	Hypothetical protein	Transposase IS30	Integrase, catalytic region PFAM: Integrase, catalytic region KEGG: cbu:CBU_1544 transposase, IS30 family	Hypothetical protein	Transposase	Putative uncharacterized protein	
ECOLI04128	pseudo	Putative tranposase	Putative uncharacterized protein	IS600 ORF1 KEGG: sbo:SBO_P062 IS600 ORF1	transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein KEGG: mlo:msr6149 transposase	ISMca2 transposase OrfA	Transposase	Putative transposase	Transposase IS3/IS911 family protein	transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein KEGG: cdi:DIP2074 putative tranposase	Transposase IS3/IS911 family protein	Transposase IS3/IS911 family protein	Transposase IS3	Transposase family protein	Transposase ORF A, IS600	Putative transposase	InsM protein	Putative uncharacterized protein	IS600 ORF1-like protein	
ECOLI04129	Putative transposase insO for insertion sequence element IS911B	Putative transposase	Putative uncharacterized protein YPCD1.15c	Putative uncharacterized protein	Integrase, catalytic region	Putative transposase	hypothetical protein	Transposase	hypothetical protein identified by Glimmer2; putative	Hypothetical protein	Integrase, catalytic region	Integrase, catalytic region	Putative uncharacterized protein	integrase, catalytic region KEGG: mkm:Mkms_2638 integrase, catalytic region	KpLE2 phage-like element; partial transposase of insertion element IS911B	Integrase, catalytic region	Putative uncharacterized protein	Putative transposase	Putative uncharacterized protein	Transposase and inactivated derivatives	Transposase ORF B, IS911	Transposase ORF B, IS911	Transposase ORF B, IS911	pseudo	Putative transposase	InsO-2 protein	
ECOLI04130	Putative uncharacterized protein b4286	KpLE2 phage-like element; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein yjhV	Putative uncharacterized protein yjhV	Putative uncharacterized protein yjhV	Putative uncharacterized protein yjhV	Putative uncharacterized protein yjhV	YjhV protein	
ECOLI04130	Putative uncharacterized protein b4286	KpLE2 phage-like element; predicted protein	Putative uncharacterized protein	Putative uncharacterized protein yjhV	Putative uncharacterized protein yjhV	Putative uncharacterized protein yjhV	Putative uncharacterized protein yjhV	Putative uncharacterized protein yjhV	YjhV protein	
ECOLI04131	Fe(3+) dicitrate transport ATP-binding protein fecE	Iron(III) dicitrate transport ATP-binding protein	Iron(III) dicitrate transport system, ATP-binding protein FecE	ATP-binding component of citrate-dependent iron(III) transport protein	Iron(III) dicitrate transport ATP-binding protein FecE	Putative uncharacterized protein gbs1462	identified by match to PFAM protein family HMM PF00005 iron compound ABC transporter, ATP-binding protein	identified by match to protein family HMM PF00005 iron(III) dicitrate transport system, ATP-binding protein FecE	ABC transporter	identified by similarity to SP:P49938; match to protein family HMM PF00005 ferrichrome ABC transporter, ATP-binding protein	Code: PH; COG: COG1120 ATP-binding component of citrate-dependent iron(III) transport protein	Ferrichrome transport ATP-binding protein fhuC	Code: PH; COG: COG1120 ATP-binding component of citrate-dependent iron(III) transport protein	ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component	ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component	Iron(III) dicitrate transport ATP-binding protein FecE	ABC transporter related	KpLE2 phage-like element; iron-dicitrate transporter subunit; ATP-binding component of ABC superfamily	ABC transporter related	Putative uncharacterized protein	ABC transporter related	Ferrichrome transport ATP-binding protein FhuC	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	ABC transporter ATP binding protein	Ferrichrome transport ATP-binding protein	
ECOLI04131	Fe(3+) dicitrate transport ATP-binding protein fecE	Iron(III) dicitrate transport ATP-binding protein	Iron(III) dicitrate transport system, ATP-binding protein FecE	ATP-binding component of citrate-dependent iron(III) transport protein	Iron(III) dicitrate transport ATP-binding protein FecE	Putative uncharacterized protein gbs1462	identified by match to PFAM protein family HMM PF00005 iron compound ABC transporter, ATP-binding protein	identified by match to protein family HMM PF00005 iron(III) dicitrate transport system, ATP-binding protein FecE	ABC transporter	identified by similarity to SP:P49938; match to protein family HMM PF00005 ferrichrome ABC transporter, ATP-binding protein	Code: PH; COG: COG1120 ATP-binding component of citrate-dependent iron(III) transport protein	Ferrichrome transport ATP-binding protein fhuC	Code: PH; COG: COG1120 ATP-binding component of citrate-dependent iron(III) transport protein	ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component	ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component	Iron(III) dicitrate transport ATP-binding protein FecE	ABC transporter related	KpLE2 phage-like element; iron-dicitrate transporter subunit; ATP-binding component of ABC superfamily	ABC transporter related	Putative uncharacterized protein	ABC transporter related	Ferrichrome transport ATP-binding protein FhuC	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element	ABC transporter ATP binding protein	Ferrichrome transport ATP-binding protein	
ECOLI04132	Fe(3+) dicitrate transport system permease protein fecD	FecD	Iron(III) dicitrate transport system permease protein	Iron(III) dicitrate transport system, permease protein FecD	Putative iron transport system membrane protein	Ferrichrome ABC transporter	Iron(III) dicitrate transport system permease protein FecD	identified by match to protein family HMM PF01032 iron compound ABC transporter, permease protein	Ferrichrome ABC transporter	Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020) putative transport system permease protein	hypothetical protein, similar to ferrichrome ABC transporter (permease)	Ortholog of S. aureus MRSA252 (BX571856) SAR2266 FecCD transport family protein	hypothetical protein, similar to ferrichrome ABC transporter (permease)	Similar to Escherichia coli citrate-dependent iron transport protein FecD SW:FECD_ECOLI (P15029) (318 aa) fasta scores: E(): 1.1e-38, 39.8% id in 314 aa, and to Bacillus subtilis hypothetical protein YfmE TR:O34832 (EMBL:Z99108) (333 aa) fasta scores: E(): 8.6e-50, 46.3% id in 311 aa FecCD transport family protein	Code: P; COG: COG0609 citrate-dependent iron transport membrane-bound protein	identified by similarity to EGAD:7245; match to protein family HMM PF01032 iron compound ABC transporter, permease protein	similar to gi|27468684|ref|NP_765321.1| [Staphylococcus epidermidis ATCC 12228], percent identity 71 in 316 aa, BLASTP E(): e-128 putative ABC-type cobalamin Fe3+-siderophores transport system permease component	iron compound ABC transporter, permease protein identified by match to protein family HMM PF01032	transport system permease protein	ferrichrome ABC transporter	Code: P; COG: COG0609 citrate-dependent iron transporter membrane-bound protein	iron compound ABC transporter, permease protein identified by match to protein family HMM PF01032	conserved hypothetical protein	iron compound ABC transporter, permease protein COG0609 ABC-type Fe3+-siderophore transport system, permease component	transport system permease protein	Putative uncharacterized protein	Iron(III) dicitrate ABC transporter,permease protein FecD	Transport system permease protein precursor	transport system permease protein PFAM: transport system permease protein KEGG: sar:SAR2266 FecCD transport family protein	
ECOLI04133	Fe(3+) dicitrate transport system permease protein fecC	Iron(III) dicitrate transport system permease protein	Iron(III) dicitrate transport system permease protein FecC	Code: P; COG: COG0609 citrate-dependent iron(III) transport protein, cytosolic	Code: P; COG: COG0609 citrate-dependent iron(III) transport protein cytosolic	Iron(III) dicitrate ABC transporter,permease protein FecC	KpLE2 phage-like element; iron-dicitrate transporter subunit; membrane component of ABC superfamily	Transport system permease protein precursor	Transport system permease protein precursor	Putative uncharacterized protein	Iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element	Iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element	FecC protein	Iron(Iii) dicitrate transport system permease protein fecc	Transport system permease protein	KpLE2 phage-like element; iron-dicitrate transporter subunit	Iron compound ABC transporter, permease protein	Iron-dicitrate transporter subunit	
ECOLI04134	Fe(3+) dicitrate-binding periplasmic protein	Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB	ferrichrome ABC transporter (substrate-binding protein)	Putative FecB	Putative iron transport system binding (Secreted) protein	Putative iron-siderophore transport system,periplasmic binding protein	Iron(III) dicitrate-binding periplasmic protein FecB	identified by match to protein family HMM PF01497 iron compound ABC transporter, iron compound-binding protein	Ferrichrome ABC transporter	Putative ABC transporter, periplasmic iron- siderophore binding protein	iron(III) dicitrate-binding protein	putative iron ABC transport system, solute-binding protein	hypothetical protein, similar to ferrichrome ABC transporter binding protein	identified by match to protein family HMM PF01497 iron(III) dicitrate transport system, periplasmic iron-binding protein FecB	Periplasmic binding protein	Code: P; COG: COG4594 citrate-dependent iron transport, periplasmic protein	similar to gi|27468686|ref|NP_765323.1| [Staphylococcus epidermidis ATCC 12228], percent identity 64 in 331 aa, BLASTP E(): e-118 putative ABC-type cobalamin Fe3+-siderophores transport system periplasmic component	periplasmic binding protein	probable ferrichrome ABC transporter, substrate-binding protein similar to YfmC [Bacillus subtilis] and RC202 [Ruegeria sp. PR1b] Similar to swissprot:O34348 Putative location:bacterial periplasmic space Psort-Score: 0.9321; go_function: iron ion transporter activity [goid 0005381]; go_process: high affinity iron ion transport [goid 0006827]	Putative iron-siderophore transport system, periplasmic binding protein precursor	periplasmic binding protein	Iron-siderophore transport system, periplasmic binding protein precursor	Hypothetical protein	Iron-siderophore transport system, periplasmic binding protein precursor	ABC Fe(3+) transporter, substrate binding component	Periplasmic binding protein precursor	Periplasmic binding protein precursor	Periplasmic binding protein precursor	Iron(III) dicitrate ABC transporter, periplasmic iron(III) dicitrate-binding protein FecB	
ECOLI04135	Fe(3+) dicitrate transport protein fecA	Fe(III) dicitrate transport protein FecA	Heme transport protein	Probable TonB-dependent receptor	Putative TonB-dependent outer membrane protein	Outer membrane iron(III) dicitrate receptor	TonB system receptor, putative	Iron(III) dicitrate transport protein	Iron(III) dicitrate transport protein fecA	Outer membrane receptor protein	Iron(III) dicitrate outer membrane transporter protein FecA	IRON(III) DICITRATE TRANSPORT PROTEIN	mostly Fe transport; COG1629 TonB-dependent receptor	Similar to Vibrio parahaemolyticus ferric vibrioferrin receptor PvuA SWALL:Q9AQK7 (EMBL:AB048250) (712 aa) fasta scores: E(): 6.5e-13, 23.02% id in 721 aa, and to Rhizobium meliloti putative outer membrane receptor protein r02383 or SMC02721 SWALL:Q92N47 (EMBL:AL591790) (932 aa) fasta scores: E(): 9.8e-74, 38.68% id in 623 aa, and to Caulobacter crescentus TonB-dependent receptor CC0139 SWALL:Q9ABT1 (EMBL:AE005688) (730 aa) fasta scores: E(): 6.1e-18, 25.64% id in 733 aa putative TonB-dependent outer membrane receptor protein	Outer membrane iron(III) dicitrate receptor	Outer membrane receptor for Fe3+-dicitrate	identified by match to protein family HMM PF00593; match to protein family HMM PF07715 TonB dependent receptor	identified by match to protein family HMM PF00593; match to protein family HMM PF07660; match to protein family HMM PF07715; match to protein family HMM TIGR01783 iron(III) dicitrate transport protein fecA	identified by match to protein family HMM PF00593; match to protein family HMM PF07660; match to protein family HMM PF07715; match to protein family HMM TIGR01783 iron(III) dicitrate transport protein fecA	TonB-dependent siderophore receptor	TonB-dependent siderophore receptor	citrate-dependent iron transport; Code: P; COG: COG4772 outer membrane receptor	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type rc : receptor putative TonB-dependent receptor protein	putative TonB-dependent outer membrane protein identified by match to protein family HMM PF00593; match to protein family HMM PF07715	TonB-dependent siderophore receptor	Code: P; COG: COG4772 citrate-dependent iron transport, outer membrane receptor	TonB-dependent receptor	TonB-dependent receptor precursor	FecA-like outer membrane receptor	
ECOLI04136	Protein fecR	Putative transmembrane sensor	Protein fecR	identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773 sigma factor regulatory protein FecR	Code: PT; COG: COG3712 regulator for fec operon, periplasmic	Protein FecR	anti-FecI sigma factor, FecR PFAM: FecR protein KEGG: pen:PSEEN2530 FecR-like transmembrane sensor	KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport	Anti-FecI sigma factor, FecR	Anti-FecI sigma factor, FecR	Putative uncharacterized protein	Iron(III) dicitrate sensor protein FecR	Transmembrane signal transducer for ferric citrate transport; KpLE2 phage-like element	Transmembrane signal transducer for ferric citrate transport; KpLE2 phage-like element	Transmembrane signal transducer for ferric citrate transport; KpLE2 phage-like element	Transmembrane signal transducer for ferric citrate transport; KpLE2 phage-like element	Transmembrane signal transducer for ferric citrate transport; KpLE2 phage-like element	FecR protein	Anti-FecI sigma factor, FecR	Protein fecr	KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport	Anti-FecI sigma factor, FecR	
ECOLI04137	Probable RNA polymerase sigma factor fecI	Heme uptake regulator	Heme uptake regulator	RNA polymerase sigma factor	Heme uptake regulator	RNA polymerase sigma factor	RNA polymerase sigma-70 factor, ECF subfamily	identified by match to protein family HMM PF04542 RNA polymerase sigma-70 factor, ECF subfamily	Sigma-70 region 2	Code: K; COG: COG1595 probable RNA polymerase sigma factor	Code: K; COG: COG1595 probable RNA polymerase sigma factor	RNA polymerase sigma subunit cytoplasmic protein	RNA polymerase sigma subunit cytoplasmic protein	putative sigma-70 factor, ECF subfamily FecI: belongs to the extracytoplasmic-function (ECF) sigma factor, which represent a subgroup of the sigma 70 family. The sigma factor is an initiation factor that promotes attachment of the RNA polymerase to specific initiation sites and then is released. Involved in iron metabolism. High confidence in function and specificity	RNA polymerase sigma factor, ECF subfamily, SigC_1 cytoplasmic protein involved in promoter recognition, transcription initiation.	putative sigma-70 factor, ECF subfamily	Putative RNA polymerase sigma factor	RNA polymerase ECF-type sigma factor	Putative ECF-type sigma factor	RNA polymerase sigma factor	RNA polymerase, sigma-24 subunit, ECF subfamily	Sigma factor, ECF family	ECF-family RNA polymerase sigma factor	RNA polymerase sigma factor FecI	Probable sigma-70 factor, ECF subfamily	RNA polymerase, sigma-24 subunit, ECF subfamily	RNA polymerase, sigma-24 subunit, ECF subfamily	KpLE2 phage-like element; RNA polymerase, sigma 19 factor	RNA polymerase, sigma-24 subunit, ECF subfamily	
ECOLI03313	Insertion element IS1 1/5/6 protein insB	Probable insertion element IS1 1/5/6 protein	identified by match to protein family HMM PF03400 InsB	insertion element IS1 1/5/6 protein InsB	Transposase	IS1 transposase InsAB'	Transposase IS1 orfB	
ECOLI03313	Insertion element IS1 1/5/6 protein insB	Probable insertion element IS1 1/5/6 protein	identified by match to protein family HMM PF03400 InsB	insertion element IS1 1/5/6 protein InsB	Transposase	IS1 transposase InsAB'	Transposase IS1 orfB	
ECOLI04139	Uncharacterized transcriptional regulator yjhU	Deoxyribonucleoside regulator	Deoxyribonucleoside regulator	identified by similarity to SP:P39140; match to protein family HMM PF04198 transcriptional repressor DeoR	citrate lyase regulator	transcriptional regulator, putative	citrate lyase regulator	Probable transcriptional regulator	Putative transcriptional regulator, sugar-binding family	Transcriptional regulator, DeoR family	DeoR-family transcriptional regulator	Putative deoxyribonucleoside regulator	Transcriptional regulator, DeoR family	KpLE2 phage-like element; predicted DNA-binding transcriptional regulator	Putative deoxyribonucleoside regulator	Putative deoxyribonucleoside regulator	Transcriptional regulator, DeoR family	Putative transcriptional regulator	Putative DNA-binding transcriptional regulator; KpLE2 phage-like element	Putative DNA-binding transcriptional regulator; KpLE2 phage-like element	Putative SorC family transcriptional regulator	Putative transcription repressor of dra/nupC/pdp operon DeoR	Transcriptional regulator deoR family	Transcriptional regulator with sigma factor- related N-terminal domain	Transcriptional regulator, DeoR family	Putative deoxyribonucleoside regulator DeoR	Putative deoxyribonucleoside regulator	KpLE2 phage-like element; predicted DNA-binding transcriptional regulator	Putative deoxyribonucleoside regulator DeoR	
ECOLI04140	Uncharacterized permease yjhF	Putative gluconate permease	Gluconate permease, putative	InterProMatches:IPR003474; Molecular Function: gluconate transporter activity (GO:0015128), Biological Process: gluconate transport (GO:0015725), Cellular Component: membrane (GO:0016020) gluconate permease	H+:gluconate symporter	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter high-affinity gluconate permease (GntP family)	Gluconate transporter	Gluconate transporter	high-affinity gluconate permease (GntP family) identified by match to protein family HMM PF02447; match to protein family HMM TIGR00791	gluconate permease, putative identified by match to protein family HMM PF02447; match to protein family HMM TIGR00791	gluconate permease	putative gluconate permease (GntP family) Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter	High-affinity gluconate permease	Transporter, gluconate:H+ symporter (GntP) family	Gluconate transporter	Transporter, gluconate:H+ symporter (GntP) family	Gluconate permease	Transporter, gluconate:H+ symporter (GntP) family	gluconate transporter TIGRFAM: gluconate transporter PFAM: Gluconate transporter; Citrate transporter KEGG: pen:PSEEN2420 gluconate permease (GntP family)	Gluconate transporter	KpLE2 phage-like element; predicted transporter	GntP family gluconate:proton (H+) symporter	Transporter, gluconate:H+ symporter (GntP) family	Transporter, gluconate:H+ symporter (GntP) family	Gluconate transporter	Putative transporter; KpLE2 phage-like element	Gluconate permease	Putative transporter; KpLE2 phage-like element	
ECOLI04141	Uncharacterized protein yjhG	Putative dihydroxyacid dehydratase	dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	KpLE2 phage-like element; predicted dehydratase	Putative uncharacterized protein	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Putative dehydratase	Dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase	Putative dehydratase	Putative dehydratase; KpLE2 phage-like element	Putative dehydratase; KpLE2 phage-like element	Putative dihydroxyacid dehydratase	Dihydroxy-acid dehydratase	KpLE2 phage-like element; predicted dehydratase	
ECOLI04142	Uncharacterized protein yjhH	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Probable 2-keto-3-deoxy gluconate aldolase	Dihydrodipicolinate synthase	Probable dihydrodipicolinate synthetase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthase/N-acetylneuraminate lyase	Dihydrodipicolinate synthase	Putative dihydrodipicolinate synthase	Putative dihydrodipicolinate synthetase	Dihydrodipicolinate synthase	Dihydrodipicolinate synthetase family protein	Probable dihydrodipicolinate synthetase	InterProMatches:IPR005263 putative dihydrodipicolinate synthase	identified by match to protein family HMM PF00701 dihydrodipicolinate synthetase family protein	dihydrodipicolinate synthase	Hypothetical dihydrodipicolinate synthase	identified by match to protein family HMM PF00701 dihydrodipicolinate synthase, putative	Dihydrodipicolinate synthetase	putative dihydrodipicolinate synthase similarity:fasta; SWALL:DAP2_BACHD (SWALL:Q9KA91); Bacillus halodurans; dihydrodipicolinate synthase 2; dapa2; length 292 aa; 283 aa overlap; query 8-290 aa; subject 6-288 aa similarity:fasta; SWALL:Q87Q15 (EMBL:AP005077); Vibrio parahaemolyticus; probable dihydrodipicolinate synthetase; length 304 aa; 296 aa overlap; query 1-295 aa; subject 1-296 aa	Dihydrodipicolinate synthetase	Dihydrodipicolinate synthetase	unknown identified by match to protein family HMM PF00701	probable dihydrodipicolinate synthetase protein Similar to VP1335 [Vibrio parahaemolyticus], bll4423[Bradyrhizobium japonicum] and AGR_C_1641p[Agrobacterium tumefaciens] Similar to swissprot:Q87Q15 Putative location:bacterial cytoplasm Psort-Score: 0.1834	Dihydrodipicolinate synthetase	Dihydrodipicolinate synthetase	dihydrodipicolinate synthetase	
ECOLI04143	Uncharacterized HTH-type transcriptional regulator yjhI	Putative transcriptional regulator	Transcriptional regulator	Transcriptional regulator kipR	Regulator of exoenzymes	IclR family transcriptional regulator	Putative transcriptional regulator	SCC77.11, possible IclR-family transcriptional regulator, len: 265 aa. Similar to many other IclR-family regulators including: Escherichia coli SW:ICLR_ECOLI (EMBL:M31761) acetate operon repressor IclR (274 aa), fasta scores opt: 368 z-score: 447.5 E(): 1.5e-17 33.1% identity in 263 aa overlap and Erwinia carotovora subsp.  carotovora TR:AAD50647 (EMBL:AF135396) regulator of virulence KdgR (263 aa), fasta scores opt: 326 z-score: 397.5 E(): 9.4e-15 29.7% identity in 239 aa overlap.  Contains a possible N-terminal helix-turn-helix motif, situated between residues 36..57 (+4.94 SD) and a Pfam match to entry PF01614 IclR. putative IclR-family transcriptional regulator	identified by match to protein family HMM PF01614 transcriptional regulator, IclR family	transcriptional regulator, IclR family	transcriptional regulator, IclR family	transcription regulator	transcriptional regulator identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	IclR-family protein transcriptional regulator	Transcriptional regulator, IclR family	Transcriptional regulator IclR-like protein	KpLE2 phage-like element; predicted DNA-binding transcriptional regulator	Transcriptional regulator, IclR family	Regulatory proteins, IclR	Transcriptional regulator, IclR family	IclR-type transcriptional regulator	Transcriptional regulator	Putative DNA-binding transcriptional regulator; KpLE2 phage-like element	Putative DNA-binding transcriptional regulator; KpLE2 phage-like element	Transcriptional regulator, IclR family	Transcriptional regulator, IclR family	Putative IclR-family transcriptional regulator	Transcriptional regulator, IclR family	KpLE2 phage-like element; predicted DNA-binding transcriptional regulator	
ECOLI04144	Putative sgc region transcriptional regulator	Transcriptional regulator, deoR family	IPR001034: Bacterial regulatory protein, DeoR family putative transcriptional repressor of sgc operon (DeoR family)	similar to Salmonella typhi CT18 putative regulatory protein putative regulatory protein	Putative DeoR family transcriptional repressor of sgc operon	Transcriptional regulator, DeoR family	Putative bacterial regulatory protein, DeoR	KpLE2 phage-like element; predicted DNA-binding transcriptional regulator	Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Putative uncharacterized protein	Transcription regulator	Putative regulatory protein	Putative regulatory protein	Transcriptional regulator, DeoR family	Putative regulatory protein	Putative regulatory protein	Putative regulatory protein	Putative regulatory protein	Putative regulatory protein	Putative regulatory protein	Transcriptional regulator, DeoR family	Putative DNA-binding transcriptional regulator; KpLE2 phage-like element	Transcriptional regulator, DeoR family	Putative DNA-binding transcriptional regulator; KpLE2 phage-like element	Putative regulatory protein	SgcR protein	KpLE2 phage-like element; predicted DNA-binding transcriptional regulator	
ECOLI04145	Protein sgcE	Putative ribulose-5-phosphate 3-epimerase	IPR000056: Ribulose-phosphate 3-epimerase putative ribulose-phosphate 3-epimerase	similar to Salmonella typhi CT18 putative ribulose-5-phosphate 3-epimerase putative ribulose-5-phosphate 3-epimerase	Putative ribulose-phosphate 3-epimerase	transcript_id=ENSTBET00000006397	KpLE2 phage-like element; predicted epimerase	Putative uncharacterized protein	Putative ribulose-5-phosphate 3-epimerase	Protein SgcE	Protein SgcE	Protein SgcE	Putative ribulose-5-phosphate 3-epimerase	Protein SgcE	Protein SgcE	Putative ribulose-5-phosphate 3-epimerase	Putative epimerase; KpLE2 phage-like element	Putative epimerase; KpLE2 phage-like element	Ribulose-phosphate 3-epimerase	SgcE protein	KpLE2 phage-like element; predicted epimerase	Ribulose-phosphate 3-epimerase PFAM: ribulose-phosphate 3-epimerase; KEGG: sec:SC1613 ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase	
ECOLI04146	Putative phosphotransferase IIA component sgcA	Putative phosphotransferase enzyme	Phosphotransferase system mannitol/fructose- specific IIA domain	Phosphotransferase enzyme II, A component	Putative phosphotransferase enzyme II, A component SgcA	PTS system, mannitol/fructose-specific enzyme II, A component	IPR002178: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 putative Sugar Specific PTS Enzyme II	similar to Salmonella typhi CT18 putative phosphotransferase enzyme putative phosphotransferase enzyme	Putative sugar specific PTS enzyme II	Phosphotransferase enzyme II, A component	Phosphotransferase enzyme II, A component	Complete genome	Phosphotransferase enzyme II, A component	Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)	KpLE2 phage-like element; predicted phosphotransferase enzyme IIA component	Putative uncharacterized protein	Phosphotransferase system mannitol/fructose- specific IIA domain	Phosphotransferase system mannitol/fructose- specific IIA domain	Mannitol-specific cryptic phosphotransferase enzyme IIA component	Putative phosphotransferase enzyme	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	Putative phosphotransferase enzyme	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	Putative phosphotransferase enzyme	Putative phosphotransferase enzyme IIA component; KpLE2 phage-like element	Putative PTS system, specific IIA component	
ECOLI04147	Putative sgc region protein sgcQ	Predicted TIM-barrel enzyme	Putative uncharacterized protein STY1449	photosystem I biogenesis protein	TIM-barrel enzyme	IPR005137: BtpA family putative nucleoside triphosphatase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative nucleoside triphosphatase	photosystem I assembly BtpA	Photosystem I assembly BtpA	transcript_id=ENSGACT00000016633	Photosystem I assembly BtpA	photosystem I assembly BtpA PFAM: photosystem I assembly BtpA KEGG: mmc:Mmcs_2423 photosystem I assembly BtpA	photosystem I assembly BtpA PFAM: photosystem I assembly BtpA KEGG: mmc:Mmcs_2423 photosystem I assembly BtpA	Hypothetical protein	photosystem I assembly BtpA PFAM: photosystem I assembly BtpA KEGG: mmc:Mmcs_2423 photosystem I assembly BtpA	Photosystem I assembly BtpA	Photosystem I assembly BtpA	Putative uncharacterized protein	photosystem I assembly BtpA PFAM: photosystem I assembly BtpA KEGG: mmc:Mmcs_2423 photosystem I assembly BtpA	KpLE2 phage-like element; predicted nucleoside triphosphatase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI04148	Putative permease IIC component	Putative phosphotransferase enzyme	Lmo0508 protein	Lin0508 protein	putative PTS system enzyme IIC component	similar to Salmonella typhi CT18 putative phosphotransferase enzyme putative phosphotransferase enzyme	identified by similarity to SP:P37189; match to protein family HMM PF03611 PTS system, galactitol-specific, IIC component, putative	Putative PTS system enzyme IIC component	KpLE2 phage-like element; predicted phosphotransferase enzyme IIC component	Putative uncharacterized protein	Putative phosphotransferase enzyme	PTS system, IIc component	PTS system, IIc component	PTS system, IIc component	Putative phosphotransferase enzyme	PTS system, IIc component	PTS system, IIc component	Putative phosphotransferase enzyme	Putative phosphotransferase enzyme IIC component; KpLE2 phage-like element	Putative PTS system Galactitol-specific IIC component	Putative phosphotransferase enzyme IIC component; KpLE2 phage-like element	Putative PTS system, Galactitol-specific IIC component	Putative phosphotransferase enzyme	SgcC protein	KpLE2 phage-like element; predicted phosphotransferase enzyme IIC component	PTS system, galactitol-specific IIC subunit TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component; KEGG: eum:ECUMN_4903 putative phosphotransferase enzyme IIC component; KpLE2 phage-like element	PTS system, galactitol-specific IIC component	hypothetical protein	PTS system, galactitol-specific IIC subunit	
ECOLI04149	Putative phosphotransferase enzyme IIB component sgcB	CDS_ID OB2754 PTS system galactitol-specific enzyme II B component	PTS system, galactitol-specific enzyme II, B component	PTS system, galactitol-specific enzyme II, B component	PTS system, galactitol-specific enzyme II B component	PTS system, galactitol-specific enzyme II, B component	putative PTS system, enzymeIIB component	similar to Salmonella typhi CT18 putative phosphotransferase enzyme putative phosphotransferase enzyme	hypothetical protein, similar to PTS, galactitol-specific IIB component	Ortholog of S. aureus MRSA252 (BX571856) SAR0241 putative PTS transport system, IIB component	hypothetical protein, similar to PTS, galactitol-specific IIB component	Putative PTS system, enzymeIIB component	Similar to Escherichia coli PTS system, galactitol-specific IIB component GatB SW:PTKB_ECOLI (P37188) (94 aa) fasta scores: E(): 3.7e-09, 37.363% id in 91 aa, and to Bacillus halodurans PTS system, galactitol-specific enzyme IIB component GatB TR:Q9KGB5 (EMBL:AP001507) (94 aa) fasta scores: E(): 1.5e-24, 81.319% id in 91 aa putative PTS transport system, IIB component	identified by similarity to SP:P37188; match to protein family HMM PF02302 PTS system, galactitol-specific IIB component, putative	identified by match to protein family HMM PF02302 PTS system, sorbitol-specific IIB component	PTS system, galactitol-specific enzyme II, B component identified by match to protein family HMM PF02302	PTS system component, putative	PTS system, IIb component	Putative uncharacterized protein	phosphotransferase system lactose/cellobiose-specific IIB subunit PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit KEGG: sao:SAOUHSC_00215 PTS system component, putative	phosphotransferase system, lactose/cellobiose-specific IIB subunit PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit	Putative uncharacterized protein	PTS family galactitol (gat) porter component IIB	Predicted enzyme IIB component of PTS	PTS system, galactitol-specific IIB component, putative precursor	PTS family galactitol (Gat) porter component IIB	Putative uncharacterized protein	Putative phosphotransferase enzyme	PTS system, Lactose/Cellobiose specific IIB subunit	
ECOLI04150	Putative sgc region protein sgcX	Endoglucanase, putative	Putative sgc region protein sgcX	CDS_ID OB0772 endoglucanase	Cellulase M and related proteins	putative cellulase protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative sgc region protein sgcX	Deblocking aminopeptidase	Peptidase M42	peptidase M42	peptidase M42	Cellulase	Peptidase M42	Cellulase	Peptidase, M42 family	Predicted hydrolase	KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain	Cellulase	Peptidase M42 family protein	Peptidase M42 family protein	Peptidase M42	Aminopeptidase	Putative uncharacterized protein	Peptidase M42 family protein	Putative uncharacterized protein	Peptidase M42 family protein	Putative uncharacterized protein	Putative sgc region protein SgcX	
ECOLI04152	Uncharacterized protein yjhP	Putative uncharacterized protein yjhP	Possible methyltransferase	SC2H12.12, unknown, len: 248 aa. Similar to Streptomyces coelicolor TR:CAB89463(EMBL:AL354048) putative fatty acid synthase, SCE25.32C (438 aa), fasta scores opt: 195 z-score: 237.4 E(): 9.5e-06 26.3% identity in 232 aa overlap. Also highly similar to Escherichia coli SW:YJHP_ECOLI(EMBL:U14003) hypothetical 27.4 kd protein (248 aa), fasta scores opt: 1174 z-score: 1413.2 E():0 66.5% identity in 248 aa overlap. conserved hypothetical protein SC2H12.12.	conserved hypothetical protein	SAM-dependent methyltransferase	conserved hypothetical protein	conserved hypothetical protein	methyltransferase	conserved hypothetical protein	methyltransferase	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein Similar to SWISSPROT:P39367 (68% identity),TREMBL:Q8Z1C8 (66% identity).	Methyltransferase type 12 PFAM: Methyltransferase type 11; Methyltransferase type 12 KEGG: sco:SCO7213 hypothetical protein	Methyltransferase type 11 PFAM: Methyltransferase type 11 KEGG: gme:Gmet_2793 hypothetical protein	AAA ATPase VAT domain protein domain protein	Methyltransferase	Methyltransferase type 12 PFAM: Methyltransferase type 11; Methyltransferase type 12 KEGG: sat:SYN_00463 methyltransferase	Methyltransferase type 12	Putative SAM-dependent methyltransferase	KpLE2 phage-like element; putative methyltransferase	Methyltransferase type 11	KpLE2 phage-like element; predicted methyltransferase	Putative uncharacterized protein	Methyltransferase type 12	Methyltransferase type 11	Putative uncharacterized protein	Putative methyltransferase	
ECOLI04153	Uncharacterized N-acetyltransferase yjhQ	Probable acetyltransferase	Lmo1736 protein	identified by match to PFAM protein family HMM PF00583 acetyltransferase, GNAT family	Acetyltransferase, putative	ACETYLTRANSFERASE	Lin1847 protein	Putative uncharacterized protein	Acetyltransferase protein	similar to BR1551, acetyltransferase, GNAT family acetyltransferase, GNAT family	conserved hypothetical protein	Ortholog of S. aureus MRSA252 (BX571856) SAR0841 putative acetyltransferase	conserved hypothetical protein	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	acetyltransferase	hypothetical protein, similar to acetyltransferase, GNAT family	Similar to Lactococcus lactis hypothetical protein YafC TR:Q9CJE1 (EMBL:AE006244) (173 aa) fasta scores: E(): 7.7e-27, 47.399% id in 173 aa, and to Pseudomonas aeruginosa hypothetical protein PA0711 TR:Q9I5L7 (EMBL:AE004506) (168 aa) fasta scores: E(): 1e-07, 31.250% id in 176 aa putative acetyltransferase	identified by match to protein family HMM PF00583 acetyltransferase, GNAT family	GCN5-related N-acetyltransferase	acetyltransferase, GNAT family identified by match to protein family HMM PF00583	conserved hypothetical protein	putative acetyltransferase similarity:fasta; with=UniProt:Q92N55_RHIME (EMBL:SME591790); Rhizobium meliloti (Sinorhizobium meliloti).; Hypothetical protein SMc02707.; length=183; id 87.195; 164 aa overlap; query 1-164; subject 1-164	GCN5-related N-acetyltransferase	probable acetyltransferase protein similar to AGR_C_4108p [Agrobacterium tumefaciens] Similar to swissprot:Q8UD67 Putative location:bacterial cytoplasm Psort-Score: 0.3821; go_function: transferase activity [goid 0016740]; go_function: N-acetyltransferase activity [goid 0008080]	acetyltransferase, GNAT family identified by match to protein family HMM PF00583	hypothetical protein similarity to COG3153 Predicted acetyltransferase(Evalue: 9E-28)	acetyltransferase, GNAT family identified by match to protein family HMM PF00583	conserved hypothetical protein	Acetyltransferase, GNAT family	
ECOLI04154	UPF0386 protein yjhX	UPF0386 protein PA0712	UPF0386 protein Atu1321	Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN	hypothetical protein	Putative uncharacterized protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 hypothetical protein hypothetical protein	hypothetical protein	UPF0386 protein yjhX	uncharacterized protein conserved in bacteria COG3811	conserved hypothetical protein similarity:fasta; with=UniProt:Q92QK6_RHIME (EMBL:SME591786); Rhizobium meliloti (Sinorhizobium meliloti).; Hypothetical protein SMc01351.; length=84; id 76.471; 85 aa overlap; query 1-85; subject 1-84	conserved hypothetical protein	conserved hypothetical protein KEGG: hch:HCH_03746 hypothetical protein, ev=4e-24, 62% identity	hypothetical conserved protein similar to Atu1321 [Agrobacterium tumefaciens str.  C58], SMc01351[Sinorhizobium meliloti] and mll0189[Mesorhizobium loti] Similar to swissprot:Q8UFS6 Putative location:bacterial cytoplasm Psort-Score: 0.3066	Hypothetical protein	conserved hypothetical protein identified by similarity to GB:AAK22213.1	conserved hypothetical protein KEGG: mlo:mll0189 hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative xanthine dehydrogenase, Fe-S subunit	Putative uncharacterized protein	UPF0386 protein Spro_1532	UPF0386 protein PSPA7_4799	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Hypothetical conserved protein	
ECOLI04156	Putative uncharacterized protein yjhR	Putative frameshift suppressor; KpLE2 phage-like element	Putative frameshift suppressor; KpLE2 phage-like element	
ECOLI04156	Putative uncharacterized protein yjhR	Putative frameshift suppressor; KpLE2 phage-like element	Putative frameshift suppressor; KpLE2 phage-like element	
ECOLI04157	Uncharacterized protein yjhS	Putative uncharacterized protein yjhS	Residues 1 to 326 of 326 are 99 pct identical to residues 1 to 326 of a 326 aa protein from Escherichia coli K12 ref: NP_418729.1 orf, conserved hypothetical protein	Code: L; COG: COG2801 conserved hypothetical protein	Code: L; COG: COG2801 conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjhS	conserved hypothetical protein Code: L; COG: COG2801	conserved hypothetical protein	Putative uncharacterized protein	Conserved protein	Conserved domain protein	Conserved domain protein	Conserved domain protein	Putative uncharacterized protein yjhS	Putative uncharacterized protein yjhS	Putative uncharacterized protein yjhS	Putative uncharacterized protein yjhS	Predicted protein	Putative uncharacterized protein yjhS	YjhS protein	Conserved protein	Conserved protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI04158	N-acetylneuraminate epimerase	N-acetylneuraminate epimerase	N-acetylneuraminate epimerase	Uncharacterized protein conserved in bacteria	N-acetylneuraminate epimerase	Hypothetical protein	N-acetylneuraminate epimerase	Putative uncharacterized protein BMEII0856	N-acetylneuraminate epimerase	Residues 1 to 397 of 397 are 98 pct identical to residues 8 to 404 of a 404 aa protein from Escherichia coli K12 ref: NP_418730.1 orf, conserved hypothetical protein	N-acetylneuraminate epimerase	IPR006652: Kelch repeat putative inner membrane protein	similar to BRA0412, Bme15 protein Bme15	N-acetylneuraminate epimerase	Similar to: HI0148, YJHT_HAEIN conserved hypothetical protein	N-acetylneuraminate epimerase	Code: S; COG: COG3055 conserved hypothetical protein	Kelch repeat	Code: S; COG: COG3055 conserved hypothetical protein	N-acetylneuraminate epimerase	Hypothetical protein precursor	N-acetylneuraminate epimerase	Hypothetical protein precursor	Putative exported protein precursor	conserved hypothetical protein Code: S; COG: COG3055	Hypothetical protein precursor	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI04159	Probable N-acetylneuraminic acid outer membrane channel protein nanC	Putative secreted protein	Probable N-acetylneuraminic acid outer membrane channel protein nanC precursor	Putative exported protein	Probable N-acetylneuraminic acid outer membrane channel protein nanC	Residues 1 to 241 of 241 are 99 pct identical to residues 1 to 241 of a 241 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290927.1 orf, conserved hypothetical protein	putative outer membrane protein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative outer membrane protein	identified by match to protein family HMM PF06178 Oligogalacturonate-specific porin protein (KdgM) superfamily	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein yjhA	Putative exported protein precursor	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Oligogalacturonate-specific porin protein	N-acetylnuraminic acid outer membrane channel protein	Oligogalacturonate-specific porin protein	N-acetylneuraminic acid porin NanC	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative secreted protein	Oligogalacturonate-specific porin	Oligogalacturonate-specific porin	Oligogalacturonate-specific porin	
ECOLI04160	Type 1 fimbriae regulatory protein fimB	Type 1 fimbriae regulatory protein fimB	Residues 1 to 161 of 161 are 97 pct identical to residues 1 to 161 of a 200 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290928.1 recombinase involved in phase variation; regulator for fimA	recombinase involved in phase variation; regulator for fimA; Code: L; COG: COG0582 FimB	Type 1 fimbriae regulatory protein FimB	Type 1 fimbriae regulatory protein FimB	Type 1 fimbriae Regulatory protein fimB Code: L; COG: COG0582	type 1 fimbriae regulatory protein FimB	Putative integrase/recombinase	Recombinase involved in phase variation; regulator for fimA	Site-specific recombinase, phage integrase family	Site-specific recombinase, phage integrase family	Type 1 fimbriae regulatory protein FimB	Type 1 fimbriae regulatory protein FimB	Integrase family protein	Putative uncharacterized protein	Site-specific recombinase, phage integrase family	Site-specific recombinase, phage integrase family	Type 1 fimbriae regulatory protein, FimB	Fimbriae recombinase	Type 1 fimbriae regulatory protein FimB	Type 1 fimbriae regulatory protein FimB	Type-1 fimbriae regulator FimB	Tyrosine recombinase/inversion of on/off regulator of fimA	Tyrosine recombinase/inversion of on/off regulator of fimA	Tyrosine recombinase/inversion of on/off regulator of fimA	Tyrosine recombinase/inversion of on/off regulator of fimA	Tyrosine recombinase/inversion of on/off regulator of fimA	Tyrosine recombinase/inversion of on/off regulator of fimA	
ECOLI04161	Type 1 fimbriae regulatory protein fimE	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by FrameD PUTATIVE INTEGRASE/RECOMBINASE PROTEIN	phage integrase	Recombinase involved in phase variation; regulator for fimA	BH4039 protein	Residues 1 to 198 of 198 are 99 pct identical to residues 1 to 198 of a 198 aa protein from Escherichia coli K12 ref: NP_418733.1 recombinase involved in phase variation; regulator for fimA	Putative uncharacterized protein	hypothetical protein, similar to FimE recombinase	Ortholog of S. aureus MRSA252 (BX571856) SAR0629 phage integrase family protein	hypothetical protein, similar to FimE recombinase	putative integrase	identified by similarity to EGAD:9824; match to protein family HMM PF00589 integrase/recombinase, phage integrase family	similar to gi|57284272|gb|AAW36366.1| [Staphylococcus aureus subsp. aureus COL], percent identity 54 in 175 aa, BLASTP E(): 1e-44 putative recombinase	recombinase involved in phase variation; regulator for fimA; Code: L; COG: COG0582 FimE	site-specific recombinase, phage integrase family, truncation identified by match to protein family HMM PF00589; match to protein family HMM TIGR02224; match to protein family HMM TIGR02225	phage integrase family protein identified by match to protein family HMM PF00589	probable phage recombinase/integrase	Type 1 fimbriae regulatory protein FimE	Type 1 fimbriae regulatory protein FimE	Type 1 fimbriae Regulatory protein fimE Code: L; COG: COG0582	type 1 fimbriae regulatory protein FimE	Putative uncharacterized protein	Site-specific recombinase	Recombinase involved in phase variation; regulator for fimA	Integrase family protein	phage integrase family protein PFAM: phage integrase family protein KEGG: saa:SAUSA300_0609 phage integrase family protein	phage integrase family protein PFAM: phage integrase family protein	Site-specific recombinase	possible bacteriophage integrase	
ECOLI04162	Type-1 fimbrial protein, A chain	Type-1 fimbrial protein, A chain	Major type 1 subunit fimbrin	Residues 1 to 182 of 182 are 99 pct identical to residues 1 to 182 of a 182 aa protein from Escherichia coli gb: AAG35681.1 type-1 fimbrial major subunit	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type ps : putative structure putative major fimbrial subunit protein precursor	identified by similarity to SP:P04128; match to protein family HMM PF00419 type I pilus biogenesis protein	pilin; Code: NU; COG: COG3539 major type 1 subunit fimbrin	Fimbrial protein	Fimbrial protein precursor	FimA identified by match to protein family HMM PF00419	Type-1 fimbrial major subunit	Type 1 fimbriae major subunit FimA	Fimbrial protein PFAM: Fimbrial protein KEGG: bpm:BURPS1710b_2060 FimA	Fimbrial protein PFAM: Fimbrial protein KEGG: bcn:Bcen_1146 fimbrial protein	major type 1 subunit fimbrin (pilin) Code: NU; COG: COG3539	type 1 fimbriae major subunit FimA	Fimbrial protein	Fimbrial protein-like protein precursor	Major type 1 subunit fimbrin	Type-1 fimbrial protein	Fimbrial protein	Type-1 fimbrial protein homolog	Type-1 fimbrial protein homolog	Fimbrial protein	Fimbrial protein precursor	FimA	Putative uncharacterized protein	Major type 1 subunit fimbrin	putative type-1 fimbrial protein	
ECOLI04163	Fimbrin-like protein fimI	Fimbrial protein	Residues 3 to 215 of 215 are 98 pct identical to residues 3 to 215 of a 215 aa protein from Escherichia coli K12 ref: NP_418735.1 fimbrial protein	Type 1 pili subunit FimI	Code: NU; COG: COG3539 fimbrial protein	Fimbrin-like protein fimI	FimI fimbrial protein	FimI fimbrial protein	Putative F17-like fimbrial subunit	Fimbrial protein	Type-1 fimbrial protein homolog	Type-1 fimbrial protein homolog	Putative uncharacterized protein	Type-1 fimbrial protein homolog	FimI fimbrial protein, FimI	Fimbrial protein	Type-1 fimbrial protein homolog	Type-1 fimbrial protein FimI	Fimbrial protein involved in type 1 pilus biosynthesis	Fimbrial protein involved in type 1 pilus biosynthesis	Fimbrial protein involved in type 1 pilus biosynthesis	Fimbrial protein involved in type 1 pilus biosynthesis	Fimbrial protein involved in type 1 pilus biosynthesis	Fimbrial protein involved in type 1 pilus biosynthesis	FimI protein	Fimbrial protein involved in type 1 pilus biosynthesis	Fimbrial protein involved in type 1 pilus biosynthesis	fimbrial protein FimI involved in type 1 pilus biosynthesis	Fimbrial protein	
ECOLI04164	Chaperone protein fimC	Putative fimbrial assembly chaperone	Chaperone protein fimC precursor	Pili assembly chaperone	Fimbrial chaperone protein	Periplasmic chaperone, required for type 1 fimbriae	Residues 1 to 224 of 224 are 99 pct identical to residues 18 to 241 of a 241 aa protein from Escherichia coli K12 ref: NP_418736.1 periplasmic chaperone, required for type 1 fimbriae	identified by match to protein family HMM PF00345; match to protein family HMM PF02753 pilus assembly chaperone	required for type 1 fimbriae; Code: NU; COG: COG3121 periplasmic chaperone	fimbrial chaperone protein identified by match to protein family HMM PF00345; match to protein family HMM PF02753	Chaperone protein FimC	Periplasmic chaperone protein FimC	chaperone CupC	Chaperone protein fimC precursor Code: NU; COG: COG3121	type I fimbrial chaperone	Fimbrial assembly chaperone protein	Pili assembly chaperone precursor	Periplasmic chaperone	Periplasmic pilus chaperone family protein	Fimbrial assembly chaperone protein	Chaperone protein FimC	Chaperone protein FimC	Putative uncharacterized protein	Type I fimbrial chaperone	Fimbrial chaperone	Chaperone protein FimC	Chaperone protein FimC	Type-1 fimbrial chaperone FimC	Chaperone, periplasmic	
ECOLI04165	Outer membrane usher protein fimD	Outer membrane usher protein fimD	Outer membrane protein; export and assembly of type 1 fimbriae, interrupted	Similar to outer membrane usher protein	Outer membrane usher protein FimD	Outer membrane usher protein FimD	Outer membrane usher protein fimD precursor Code: NU; COG: COG3188	outer membrane usher protein FimD precursor	Outer membrane protein; export and assembly of type 1 fimbriae	Outer membrane usher protein fimD	Outer membrane usher protein fimD	Putative uncharacterized protein	Outer membrane usher protein, FimD	Fimbrial outer membrane usher protein	Outer membrane usher protein fimD	Outer membrane usher protein fimD	Type-1 fimbrial usher protein FimD	Outer membrane usher protein, type 1 fimbrial synthesis	Outer membrane usher protein, type 1 fimbrial synthesis	Outer membrane usher protein, type 1 fimbrial synthesis	Outer membrane usher protein, type 1 fimbrial synthesis	Outer membrane usher protein, type 1 fimbrial synthesis	FimD protein	Outer membrane usher protein, type 1 fimbrial synthesis	Outer membrane usher protein, type 1 fimbrial synthesis	outer membrane usher protein FimD type 1 fimbrial synthesis	Fimbrial biogenesis outer membrane usher protein	Fimbrial usher protein FimD	
ECOLI04166	Protein fimF	FimF protein	Fimbrial morphology	Residues 1 to 156 of 156 are 99 pct identical to residues 21 to 176 of a 176 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290934.1 fimbrial morphology	Similar to major structural subunit MrpA of Proteus mirabilis	Fimbrial subunit	Code: NU; COG: COG3539 fimbrial morphology	FimF protein	Type 1 fimbriae minor subunit FimF	Fimbrial protein PFAM: Fimbrial protein KEGG: reu:Reut_A1694 fimbrial protein	fimbrial morphology Code: NU; COG: COG3539	FimF protein precursor	Fimbrial morphology	Protein FimF	Fimbrial protein FimF	Fimbrial protein FimF	P pilus assembly protein, pilin FimA	Putative fimbrial protein	Putative uncharacterized protein	Fimbrial protein precursor	Fimbrial protein FimF	Minor fimbrial subunit, polypeptide	Fimbrial subunit	Fimbrial protein FimF	Fimbrial protein FimF	Type-1 fimbrial minor subunit FimF	F17 fimbrial protein	Fimbrial subunit	Minor component of type 1 fimbriae	
ECOLI04167	Protein fimG	FimG protein	Fimbrial morphology	Residues 3 to 169 of 169 are 99 pct identical to residues 1 to 167 of a 167 aa protein from Escherichia coli K12 ref: NP_418739.1 fimbrial morphology	putative fimbrial subunit	similar to Salmonella typhi CT18 putative fimbrial subunit putative fimbrial subunit	Putative fimbrial subunit	Code: NU; COG: COG3539 fimbrial morphology	FimG protein	Type 1 fimbriae minor subunit FimG	fimbrial morphology Code: NU; COG: COG3539	P pilus assembly protein, pilin FimA	Fimbrial morphology	Protein fimG	Protein fimG	Protein fimG	Putative uncharacterized protein	Putative uncharacterized protein	Minor fimbrial subunit, FimG	Putative fimbrial subunit	Fimbrial subunit	Putative fimbrial subunit	Putative fimbrial subunit	Putative fimbrial subunit	Fimbrial protein FimG	Putative fimbrial subunit	Protein fimG	Putative fimbrial subunit	Putative fimbrial subunit	
ECOLI04168	Protein fimH	Minor fimbrial subunit, D-mannose specific adhesin	Residues 1 to 300 of 300 are 99 pct identical to residues 1 to 300 of a 300 aa protein from Escherichia coli K12 ref: NP_418740.1 minor fimbrial subunit, D-mannose specific adhesin	D-mannose specific adhesin minor fimbrial subunit	FimH protein	Type 1 fimbiral adhesin FimH	FimH protein precursor	type 1 fimbiral adhesin FimH	Minor fimbrial subunit	Protein FimH	Protein FimH	FimH mannose-binding domain protein precursor	Protein FimH	Putative uncharacterized protein	Protein FimH	Minor fimbrial subunit, D-mannose specific adhesin	Fimbrial protein FimH	Protein FimH	Type-1 fimbrial minor subunit FimH	Minor component of type 1 fimbriae	Minor component of type 1 fimbriae	Minor component of type 1 fimbriae	Minor component of type 1 fimbriae	Minor component of type 1 fimbriae	FimH protein	Minor fimbrial subunit, D-mannose specific adhesin	Minor component of type 1 fimbriae	minor component FimH of type 1 fimbriae	FimH mannose-binding domain protein	
ECOLI04169	High-affinity gluconate transporter	Gluconate permease	High-affinity gluconate transporter	Gluconate permease	High-affinity gluconate transporter	High-affinity gluconate transporter	Gluconate permease	Residues 1 to 447 of 447 are 99 pct identical to residues 1 to 447 of a 447 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290937.1 gluconate transport system permease 3	Putative gluconate transporter	Putative GntP family gluconate transporter	H+/gluconate symporter and related permeases GntT protein	gluconate permease, GntP family	identified by match to protein family HMM PF02447; match to protein family HMM TIGR00791 gluconate transporter family protein	Gluconate transporter	Putative gluconate transporter	Gluconate transporter	Putative gluconate transporter	gluconate transport system permease 3 Code: GE; COG: COG2610	Gluconate transporter precursor	Putative gluconate permease	High-affinity gluconate transporter GntP	Gluconate permease	High-affinity gluconate transporter GntP	Gluconate permease	High-affinity gluconate transporter GntP	High-affinity gluconate transporter GntP	Gluconate permease	Gluconate permease	Putative uncharacterized protein	
ECOLI04170	Mannonate dehydratase	Mannonate dehydratase	Mannonate dehydratase	Mannonate dehydratase	Mannonate dehydratase 1	Mannonate dehydratase	Mannonate dehydratase	putative D-mannonate dehydratase	Mannonate dehydratase	similar to GB:X07898, SP:P02585, PID:1220372, PID:339736, and PID:36729; identified by sequence similarity; putative mannonate dehydratase	Mannonate dehydratase	Product confidence : putative Gene name confidence : putative putative D-mannonate dehydratase protein	Mannonate dehydratase	Mannonate dehydratase	Mannonate dehydratase	CDS_ID OB3411 D-mannonate dehydrolase	Mannonate dehydratase	Residues 13 to 406 of 406 are 99 pct identical to residues 1 to 394 of a 394 aa protein from Escherichia coli K12 ref: NP_418742.1 mannonate hydrolase	Mannonate dehydratase	Mannonate dehydratase	identified by similarity to SP:P24215; match to protein family HMM PF03786; match to protein family HMM TIGR00695 mannonate dehydratase	Mannonate dehydratase	IPR004628: Mannonate dehydratase putative mannonate hydrolase	similar to Salmonella typhi CT18 D-mannonate hydrolase D-mannonate hydrolase	similar to BRA0814, mannonate dehydratase mannonate dehydratase	Mannonate dehydratase	D-mannonate hydrolase; Similar to: HI0055, UXUA_HAEIN mannonate dehydratase	Similar to Escherichia coli mannonate dehydratase UxuA or B4322 SWALL:UXUA_ECOLI (SWALL:P24215) (394 aa) fasta scores: E(): 6.2e-99, 61.89% id in 391 aa, and to Bacteroides thetaiotaomicron mannonate dehydratase BT1432 SWALL:AAO76539 (EMBL:AE016931) (389 aa) fasta scores: E(): 8.1e-131, 81.23% id in 389 aa, and to Haemophilus influenzae mannonate dehydratase UxuA or hi0055 SWALL:UXUA_HAEIN (SWALL:P44488) (394 aa) fasta scores: E(): 8.2e-100, 64.12% id in 393 aa putative mannonate dehydratase	D-mannonate dehydratase UxuA protein	
ECOLI04171	D-mannonate oxidoreductase	Mannonate oxidoreductase	D-mannonate oxidoreductase	putative mannonate oxidoreductase	D-mannonate oxidoreductase	PMID: 7610040 best DB hits: BLAST: pir:D83353; mannitol dehydrogenase PA2342 [imported] - Pseudomonas; E=1e-116 gb:AAC04472.1; (AF007800) mannitol dehydrogenase [Pseudomonas; E=1e-111 embl:CAA96356.1; (Z71688) ORF YNR073c [Saccharomyces cerevisiae]; E=1e-102 COG: PA2342; COG0246 Mannitol-1-phosphate/altronate dehydrogenases; E=1e-117 PFAM: PF01232; Mannitol dehydrogenase; E=9.3e-176 D-mannonate oxidoreductase	Mannonate oxidoreductase	Mannonate oxidoreductase	Mannitol-1-phosphate/altronate dehydrogenase	Residues 1 to 486 of 486 are 99 pct identical to residues 1 to 486 of a 486 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290939.1 mannonate oxidoreductase	D-mannonate oxidoreductase	Putative uncharacterized protein	IPR000669: Mannitol dehydrogenase; IPR001993: Mitochondrial substrate carrier putative D-mannonate oxidoreductase	similar to Salmonella typhi CT18 D-mannonate oxidoreductase D-mannonate oxidoreductase	Putative D-mannonate oxidoreductase	Code: G; COG: COG0246 D-mannonate oxidoreductase	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3029026, 8157608; Product type e : enzyme D-mannonate oxidoreductase	Code: G; COG: COG0246 D-mannonate oxidoreductase	D-mannonate oxidoreductase	Mannitol dehydrogenase-like protein	Mannitol dehydrogenase, C-terminal domain protein	Mannitol dehydrogenase-like	D-mannonate oxidoreductase	mannitol 2-dehydrogenase identified by match to protein family HMM PF01232; match to protein family HMM PF08125	Mannitol dehydrogenase, C-terminal domain PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain KEGG: mmc:Mmcs_4359 mannitol dehydrogenase-like protein	D-mannonate oxidoreductase Code: G; COG: COG0246	D-mannonate oxidoreductase NAD-binding PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain KEGG: ppr:PBPRB1880 putative mannonate oxidoreductase	D-mannonate oxidoreductase	Probable mannitol 2-dehydrogenase	
ECOLI00309	Putative uncharacterized protein yahH	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	YahH protein	Putative uncharacterized protein	
ECOLI04172	Uxu operon transcriptional regulator	Uxu operon regulator	Transcriptional regulator, GntR family	Uxu operon transcriptional regulator	Uxu operon transcriptional regulator	Regulator for uxu operon	Residues 1 to 257 of 257 are 99 pct identical to residues 1 to 257 of a 257 aa protein from Escherichia coli O157:H7 ref: NP_313310.1 regulator for uxu operon	Uncharacterized HTH-type transcriptional regulator Rv0494/MT0514	Mb0505, -, len: 242 aa. Equivalent to Rv0494, len: 242 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 242 aa overlap). Probable transcriptional regulator, GntR family, with C-terminal part highly similar to S72893|B2168_C2_205 hypothetical protein from Mycobacterium leprae (105 aa). Also similar to other transcription regulators e.g. PDHR_ECOLI|P06957 pyruvate dehydrogenase complex repressor PDHR or GENA from Escherichia coli (254 aa), FASTA scores: opt: 284, E(): 1.2e-11, (32.6% identity in 224 aa overlap); etc. Contains PS00043 Bacterial regulatory proteins, gntR family signature, and probable helix-turn helix motif from aa 50-71 (Score 1229, +3.37 SD). PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY GNTR-FAMILY)	Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355) putative regulatory protein	IPR000524: Bacterial regulatory protein, GntR family transcriptional repressor for uxu operon	similar to Salmonella typhi CT18 uxu operon transcriptional regulator uxu operon transcriptional regulator	Similar to: HI0054, UXUR_HAEIN Uxu operon regulator	Transcriptional regulators FadR protein	Transcriptional repressor for uxu operon	Code: K; COG: COG2186 regulator for uxu operon	Code: K; COG: COG2186 regulator for uxu operon	putative transcriptional regulator	transcriptional regulator, GntR family	Uxu operon transcriptional regulator	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH GntR-like KEGG: sma:SAV1619 putative GntR-family transcriptional regulator	UxuR uxu operon transcriptional regulator	GntR-like	Uxu operon regulator	Transcriptional regulator, GntR family	regulatory protein GntR, HTH	hypothetical protein similar to transcriptional regulatory protein (probably gntR-family) Mapped to H37Rv Rv0494	Probable transcriptional regulatory protein	GntR domain protein PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: rsp:RSP_1606 putative regulatory protein, GntR family	
ECOLI04173	Uncharacterized protein yjiC	Residues 1 to 276 of 276 are 92 pct identical to residues 1 to 276 of a 276 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290941.1 orf, conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjiC	Putative uncharacterized protein yjiC	Putative uncharacterized protein yjiC	Putative uncharacterized protein yjiC	Putative uncharacterized protein yjiC	YjiC protein	Predicted protein	Predicted protein	conserved predicted protein	Putative uncharacterized protein	
ECOLI04175	Uncharacterized HTH-type transcriptional regulator yjiE	Hypothetical transcriptional regulator yjiE	LysR-family transcriptional regulator	Putative transcriptional regulator LYSR-type	Residues 1 to 303 of 303 are 98 pct identical to residues 1 to 303 of a 303 aa protein from Escherichia coli K12 ref: NP_418747.1 putative transcriptional regulator LYSR-type	Similar to lysR family transcriptional regulator hypothetical protein	conserved gene transcriptional regulator, LysR family	IPR000847: Bacterial regulatory protein LysR, HTH motif putative transcriptional regulator, LysR family	similar to Salmonella typhi CT18 probable transcriptional activator probable transcriptional activator	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pr : putative regulator putative transcriptional regulator (LysR family)	transcriptional regulator	Transcriptional regulator, LysR family	Putative LysR family transcriptional regulator	Code: K; COG: COG0583 putative transcriptional regulator LYSR-type	Transcriptional Regulator, LysR family	transcriptional regulator, LysR family	Transcriptional regulator, LysR family	Putative HTH-type transcriptional regulator YjiE	Putative transcriptional regulator	transcriptional regulator, LysR family	transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: pol:Bpro_3905 transcriptional regulator, LysR family	Transcriptional regulator, LysR family	transcriptional regulator, LysR family PFAM: regulatory protein, LysR; LysR, substrate-binding KEGG: bcn:Bcen_4259 transcriptional regulator, LysR family	Probable transcriptional regulator	putative transcriptional regulator, LysR family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	Putative transcriptional regulator	putative transcriptional regulator LYSR-type Code: K; COG: COG0583	putative DNA-binding transcriptional regulator	
ECOLI04174	Anti-adapter protein iraD	Anti-adapter protein iraD	Residues 1 to 129 of 129 are 99 pct identical to residues 5 to 133 of a 133 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290943.1 yjiD gene product	putative cytoplasmic protein	similar to Salmonella typhimurium putative cytoplasmic protein putative cytoplasmic protein	Anti-adapter protein iraD	conserved hypothetical protein	Anti-adapter protein iraD	Anti-adapter protein iraD	conserved hypothetical protein	conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	GPW/gp25 family protein	GPW/gp25 family protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	DNA replication/recombination/repair protein	DNA replication/recombination/repair protein	DNA replication/recombination/repair protein	DNA replication/recombination/repair protein	Predicted protein	DNA replication/recombination/repair protein	YjiD protein	
ECOLI04176	Isoaspartyl dipeptidase	Probable isoaspartyl dipeptidase	hypothetical isoaspartyl dipeptidase	Isoaspartyl dipeptidase	Isoaspartyl dipeptidase	Isoaspartyl dipeptidase	Isoaspartyl dipeptidase	Residues 1 to 390 of 390 are 99 pct identical to residues 1 to 390 of a 390 aa protein from Escherichia coli K12 ref: NP_418748.1 isoaspartyl dipeptidase	IPR003764: N-acetylglucosamine-6-phosphate deacetylase; IPR005847: Dihydroorotase region isoaspartyl dipeptidase	similar to Salmonella typhi CT18 probable isoaspartyl dipeptidase probable isoaspartyl dipeptidase	Isoaspartyl dipeptidase	identified by similarity to SP:P39377; match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR01975 isoaspartyl dipeptidase	isoaspartyl dipeptidase	Peptidase M38, beta-aspartyl dipeptidase	Isoaspartyl dipeptidase	isoaspartyl dipeptidase identified by similarity to SP:P39377; match to protein family HMM PF01979; match to protein family HMM TIGR01975	Isoaspartyl dipeptidase	hypothetical protein similarity to COG1820 N-acetylglucosamine-6-phosphate deacetylase	isoaspartyl dipeptidase identified by match to protein family HMM PF01979; match to protein family HMM TIGR01975	Isoaspartyl dipeptidase	isoaspartyl dipeptidase identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR01975	Isoaspartyl dipeptidase	isoaspartyl dipeptidase	isoaspartyl dipeptidase	isoaspartyl dipeptidase KEGG: bha:BH1129 isoaspartyl dipeptidase	Isoaspartyl dipeptidase	Isoaspartyl dipeptidase	Isoaspartyl dipeptidase	Isoaspartyl dipeptidase	
ECOLI04177	Inner membrane protein yjiG	Inner membrane protein yjiG	Inner membrane protein yjiG	Residues 1 to 153 of 153 are 99 pct identical to residues 1 to 153 of a 153 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290946.1 orf, conserved hypothetical protein	putative permease	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative permease	Code: S; COG: COG0700 conserved hypothetical protein	Putative uncharacterized protein	uncharacterized membrane protein	Putative uncharacterized protein yjiG	putative permease	conserved hypothetical protein Code: S; COG: COG0700	conserved hypothetical protein	Hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Inner membrane protein YjiG	Nucleoside recognition domain protein	Putative membrane protein	Nucleoside recognition domain protein	Putative membrane protein	Inner membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Inner membrane protein YjiG	Inner membrane protein YjiG	
ECOLI04178	Uncharacterized protein yjiH	Hypothetical protein yjiH	Putative uncharacterized protein yjiH	Residues 1 to 227 of 227 are 99 pct identical to residues 1 to 227 of a 227 aa protein YJIH_ECOLI sp: P39379 orf, conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative inner membrane protein	Putative membrane protein	Hypothetical protein yjiH	Putative uncharacterized protein yjiH	putative membrane protein	conserved hypothetical protein Code: S; COG: COG3314	conserved hypothetical protein	Putative uncharacterized protein	Putative transporter	Transporter gate domain protein	Nucleoside recognition domain protein	Putative transporter	Nucleoside recognition domain protein	Putative transporter	Putative uncharacterized protein	Putative uncharacterized protein	Putative transporter	Putative membrane protein	Transporter gate domain protein	Transporter gate domain protein	Transporter gate domain protein	Conserved membrane protein	Transporter gate domain protein	

ECOLI04179	RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase 2	DEHA2E05236p;similar to uniprot|Q12272 Saccharomyces cerevisiae YOL102C TPT1 tRNA 2'-phosphotransferase;	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	probable RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	PMID: 9915792 best DB hits: BLAST: swissprot:Q9ZBX9; KPTA_STRCO PROBABLE RNA 2'-PHOSPHOTRANSFERASE; E=3e-42 swissprot:Q9I778; KPTA_PSEAE PROBABLE RNA 2'-PHOSPHOTRANSFERASE; E=5e-42 pir:S56556; hypothetical 24.6K protein (iadA-mcrD intergenic region); E=1e-41 COG: PA0054; COG1859 Uncharacterized ACR; E=4e-43 PFAM: PF01885; Domain of unknown function DUF60; E=9.2e-62 RNA 2-phosphotransferase	Probable RNA 2'-phosphotransferase	SCD78.20c, possible phosphotransferase, len: 204 aa; similar to conserved hypotheticals including YJII_ECOLI from Escherichia coli (218 aa) fasta scores;opt: 506, z-score: 785.8, E(): 0, (44.1% identity in 195 aa overlap). Also similar to predicted phosphotransferase TR:O14045 (EMBL:Z99259) from Schizosaccharomyces pombe (361 aa) fasta scores; opt: 268, z-score: 242.6, E(): 2.9e-06, (36.0%identity in 175 aa overlap) possible phosphotransferase	Residues 1 to 201 of 211 are 97 pct identical to residues 18 to 218 of a 218 aa protein from Escherichia coli K12 ref: NP_418751.1 orf, conserved hypothetical protein	RNA 2'-phosphotransferase	Probable RNA 2'-phosphotransferase	RNA 2'-phosphotransferase protein	RNA 2'-phosphotransferase	
ECOLI04180	Uncharacterized protein yjiJ	Putative uncharacterized protein	MFS permease	Putative membrane protein	Hypothetical protein yjiJ	Putative membrane protein	Product confidence : putative Gene name confidence : hypothetical putative transport protein	Putative transporter	TRANSPORTER, MFS superfamily	Putative transport protein	hypothetical protein	Putative exported protein	Hypothetical major facilitator transporter protein	Similar to putative transport protein YjiJ of Escherichia coli	Putative uncharacterized protein	major facilitator (MFS) superfamily protein	putative sugar transporter	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	similar to BR0371, identified by similarity to EMB:CAC49526.1; GB:AAL43294.1; GB:52736.1; transporter MFS superfamily transporter MFS superfamily	Possible MFS Superfamily transporter	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pt : putative transporter putative transport protein (MFS superfamily)	Membrane protein, putative	Putative sugar transporter	putative MFS permease	identified by match to protein family HMM PF06779; match to protein family HMM PF07690 putative membrane protein	putative permease of the major facilitator superfamily	identified by match to protein family HMM PF06779; match to protein family HMM PF07690 major facilitator family transporter	Major facilitator superfamily MFS_1 Protein of unknown function DUF1228	Protein of unknown function DUF1228:Major facilitator superfamily MFS_1	
ECOLI04181	Uncharacterized protein yjiK	Putative uncharacterized protein	Hypothetical protein yjiK	Uncharacterized protein yjiK	putative inner membrane protein	Putative uncharacterized protein	identified by similarity to GB:AAN70717.1; match to protein family HMM PF01436; match to protein family HMM PF06977 conserved hypothetical protein	Code: S; COG: COG3204 conserved hypothetical protein	SdiA-regulated	Uncharacterized protein yjiK	conserved hypothetical protein	Uncharacterized protein yjiK	conserved hypothetical protein; putative signal peptide Evidence 4 : Homologs of previously reported genes of unknown function	conserved hypothetical protein	SdiA-regulated domain protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	SdiA-regulated domain protein PFAM: SdiA-regulated domain protein KEGG: pen:PSEEN5244 hypothetical protein	Putative uncharacterized protein	SdiA-regulated domain protein precursor	SdiA-regulated protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative inner membrane protein	SdiA-regulated protein	SdiA-regulated family protein	Putative uncharacterized protein	

ECOLI04182	Uncharacterized protein yjiL	Uncharacterized protein MJ0004	(R)-2-hydroxyglutaryl-CoA dehydratase activator	(R)-hydroxyglutaryl-CoA dehydratase activator	Activator of 2-hydroxyglutaryl-CoA dehydratase, contains a HSP70-class ATPase domain	2-hydroxyglutaryl-CoA dehydratase (Component A) related protein	Related to 2-hydroxyglutaryl-CoA dehydratase, alpha subunit	Hypothetical protein yjiL	CoA-substrate-specific enzyme activase, putative	HYDROXY-DEHYDRATASE ACTIVATOR	Putative enzyme	(R)-hydroxyglutaryl-CoA dehydratase activator	Benzoyl-CoA reductase subunit	Code: I; COG: COG1924 putative enzyme	R-phenyllactate dehydratase activator	Benzoyl-CoA reductase, subunit D	Putative uncharacterized protein yjiL	R-phenyllactate dehydratase activator identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241	D-subunit of benzoyl-CoA reductase	CoA enzyme activase	2-hydroxyglutaryl-CoA dehydratase activator, component C (archerase)	activator of (R)-2-hydroxyglutaryl-CoA dehydratase identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241	benzoyl-CoA reductase, subunit D TIGRFAM: putative CoA-substrate-specific enzyme activase; benzoyl-CoA reductase, subunit D PFAM: ATPase, BadF/BadG/BcrA/BcrD type KEGG: rpc:RPC_1026 benzoyl-CoA reductase, subunit D	putative CoA-substrate-specific enzyme activase TIGRFAM: putative CoA-substrate-specific enzyme activase PFAM: ATPase, BadF/BadG/BcrA/BcrD type KEGG: tdn:Tmden_0272 CoA enzyme activase	Putative CoA-substrate-specific enzyme activase	putative CoA-substrate-specific enzyme activase TIGRFAM: putative CoA-substrate-specific enzyme activase PFAM: ATPase, BadF/BadG/BcrA/BcrD type KEGG: dde:Dde_0089 CoA enzyme activase	predicted ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase	Putative CoA-substrate-specific enzyme activase	Putative CoA-substrate-specific enzyme activase	
ECOLI04183	Uncharacterized protein yjiM	Putative uncharacterized protein	Hypothetical protein yjiM	Putative uncharacterized protein yjiM	(R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative	Code: E; COG: COG1775 conserved hypothetical protein	2-hydroxyglutaryl-CoA dehydratase, D-component	Putative uncharacterized protein	(R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative	hypothetical protein similarity to COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB(Evalue: 1E-121)	Putative uncharacterized protein yjiM	2-hydroxyglutaryl-CoA dehydratase, component D	2-hydroxyglutaryl-CoA dehydratase, D-component identified by match to protein family HMM PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component KEGG: tdn:Tmden_0273 2-hydroxyglutaryl-CoA dehydratase, D-component	putative 2-hydroxyacyl-CoA dehydratase	putative 2-hydroxyglutaryl-CoA dehydratase	2-hydroxyglutaryl-CoA dehydratase, D-component	2-hydroxyacyl-CoA dehydratase beta-subunit	Putative 2-hydroxyglutaryl-CoA dehydratase	2-hydroxyglutaryl-CoA dehydratase, D-component	Putative 2-hydroxyglutaryl-CoA dehydratase, D- component	Putative R-2-hydroxyglutaryl-CoA dehydratase subunit	2-hydroxyglutaryl-CoA dehydratase, D-component	2-hydroxyglutaryl-CoA dehydratase, D-component	2-hydroxyacyl-CoA dehydratase beta-subunit	Putative R-2-hydroxyglutaryl-CoA dehydratase subunit	2-hydroxyglutaryl-CoA dehydratase D-component	Putative 2-hydroxyglutaryl-CoA dehydratase, D- component	2-hydroxyglutaryl-CoA dehydratase D-component	
ECOLI04184	Uncharacterized protein yjiN	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Uncharacterized membrane protein	Hypothetical Membrane Spanning Protein	Putative uncharacterized protein	Putative membrane protein	Hypothetical protein yjiN	identified by match to protein family HMM PF04286 conserved hypothetical protein	Putative exported protein	Putative exported protein	Putative exported protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein yjiN	similar to AL021933-16|CAA17428.1| percent identity: 42 in 456 aa conserved hypothetical protein	hypothetical protein	SCE6.27c, possible secreted protein, pseudogene, len: 284 aa. This CDS represents the C-terminus of SCE6.28c and is similar to the C-terminal region of Mycobacterium tuberculosis TR:O53758(EMBL:AL021933) putative membrane protein (456 aa).  SCE6.28c, possible secreted protein, pseudogene, len: 119 aa. This CDS represents the N-terminus of SCE6.27c and is highly similar to the N-terminus of Mycobacterium tuberculosis TR:O53758(EMBL:AL021933) putative membrane protein (456 aa). Appears to be a shift in reading frame after residue 119. Contains a possible N-terminal signal sequence. pseudo putative secreted protein (pseudogene).	Putative uncharacterized protein	Putative uncharacterized protein	POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN	Mb0483, -, len: 456 aa. Equivalent to Rv0473, len: 456 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 456 aa overlap). Possible conserved transmembrane protein, showing some similarity to hypothetical proteins e.g.  NP_102800.1|14021975|BAB48586.1|AP002996 hypothetical protein from Mesorhizobium loti (431 aa); P39385|YJIN_ECOLI|YJIN|B4336 HYPOTHETICAL 48.2 KD PROTEIN (POTENTIAL INTEGRAL MEMBRANE PROTEIN) from Escherichia coli strain K12 (426 aa), FASTA scores: opt: 396, E(): 9.8e-19, (31.8 % identity in 424 aa overlap); etc. POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Putative uncharacterized protein	
ECOLI04185	Multidrug resistance protein mdtM	similar to sp|Q10487 Schizosaccharomyces pombe Hypothetical protein C17C9.16c or sp|O94528 Schizosaccharomyces pombe Hypothetical protein C609.04, start by similarity	Multidrug resistance protein mdtM	Drug resistance transporter	go_component: integral to plasma membrane [goid 0005887]; go_function: multidrug transporter activity [goid 0015239]; go_process: response to toxin [goid 0009636] SCR1 protein, putative	Hypothetical multidrug resistance protein D	Multidrug resistance protein mdtM	IPR000634: Serine/threonine dehydratase, pyridoxal-phosphate-binding site; IPR005829: Sugar transporter superfamily; IPR007114: Major facilitator superfamily putative MFS family transport protein	Permease of the major facilitator superfamily	Multidrug resistance protein mdtM	Code: GEPR; COG: COG0477 putative transport protein	solute carrier family 18 (vesicular acetylcholine), member 3 [Source:HGNC Symbol;Acc:10936]	Drug resistance transporter Bcr/CflA subfamily	Code: GEPR; COG: COG0477 putative transport protein	Permeases of the major facilitator superfamily	drug:H+ antiporter-1 (DHA1) family protein	Multidrug transport protein	Putative uncharacterized protein	Multidrug resistance protein MdtM	jgi|Lotgi1|107236|e_gw1.6.509.1	Multidrug resistance protein MdtM	Major facilitator superfamily MFS_1 precursor	Multidrug resistance protein MdtM	Drug:H+ antiporter-1 (DHA1) family protein precursor	Putative uncharacterized protein	Putative uncharacterized protein	Multidrug resistance protein MdtM	Drug resistance transporter	transcript_id=ENSPVAT00000015617	
ECOLI04186	Putative uncharacterized protein yjiP	Hypothetical protein yfcI	Uncharacterized protein yjiP	Code: S; COG: COG5464 conserved hypothetical protein	Code: S; COG: COG5464; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Putative transposase YhgA family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	conserved predicted protein	
ECOLI04186	Putative uncharacterized protein yjiP	Hypothetical protein yfcI	Uncharacterized protein yjiP	Code: S; COG: COG5464 conserved hypothetical protein	Code: S; COG: COG5464; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Putative transposase YhgA family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	conserved predicted protein	
ECOLI04186	Putative uncharacterized protein yjiP	Hypothetical protein yfcI	Uncharacterized protein yjiP	Code: S; COG: COG5464 conserved hypothetical protein	Code: S; COG: COG5464; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	Putative uncharacterized protein	Putative transposase YhgA family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted protein	Putative uncharacterized protein	conserved predicted protein	
ECOLI04187	Uncharacterized HTH-type transcriptional regulator yjiR	Probable transcriptional regulator	Putative transcriptional regulator	Putative GntR-family transcriptional regulator	Putative regulator	hypothetical protein	Transcriptional regulator, GntR family	identified by similarity to SP:P39389; match to protein family HMM PF00155; match to protein family HMM PF00392 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein	transcriptional regulator, GntR family with aminotransferase activity	Code: KE; COG: COG1167 putative regulator	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II KEGG: bur:Bcep18194_C6954 transcriptional regulator, GntR family, contains an aminotransferase domain	Transcriptional regulator, GntR family	Putative ATP/GTP-binding protein	putative transcriptional regulator, GntR family Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Putative aminotransferase, class I and II	Probable transcriptional regulator	Putative transcriptional regulator, GntR family	Transcriptional regulator, GntR family with aminotransferase domain	Transcriptional regulator, GntR family with aminotransferase domain	Transcriptional regulator, GntR family/aminotransferase, classes I and II	Transcriptional regulator, GntR family with aminotransferase domain	Transcriptional regulator, GntR family/aminotransferase, classes I and II	Putative uncharacterized protein	Transcriptional regulator, GntR family with aminotransferase domain	Putative uncharacterized protein	Transcriptional regulator, GntR family with aminotransferase domain	Transcriptional regulator, GntR family with aminotransferase domain	
ECOLI04188	Uncharacterized protein yjiS	Putative uncharacterized protein yjiS	putative cytoplasmic protein	similar to Salmonella typhimurium putative cytoplasmic protein putative cytoplasmic protein	Putative cytoplasmic protein	Code: S; COG: COG5457; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved domain protein	Conserved domain protein	Putative uncharacterized protein yjiS	Putative uncharacterized protein	Conserved domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein yjiS	Putative uncharacterized protein yjiS	Putative cytoplasmic protein	Putative uncharacterized protein	Conserved protein	Conserved protein	conserved predicted protein	


ECOLI04191	Protein mcrC	conserved hypothetical protein	Similar to Escherichia coli modulator of the specificity of McrB, McrC SW:MCRC_ECOLI (P15006) (348 aa) fasta scores: E(): 8.7e-25, 27.746% id in 346 aa. Internal region of the CDS is similar to an internal region of Campylobacter jejuni hypothetical protein CJ0140 TR:Q9PIY7 (EMBL:AL139074) (443 aa) fasta scores: E(): 0.00028, 21.862% id in 247 aa putative restriction enzyme modulator protein	putative McrC protein	McrC protein	conserved hypothetical protein	Hypothetical protein	McrBC 5-methylcytosine restriction system component	McrBC 5-methylcytosine restriction system component	conserved hypothetical protein KEGG: mmc:Mmcs_0828 hypothetical protein	McrBC 5-methylcytosine restriction system component-like protein	McrBC 5-methylcytosine restriction system component-like protein	Putative McrC protein	Putative uncharacterized protein	Putative uncharacterized protein	5-methylcytosine-specific restriction enzyme McrBC, subunit McrC	Putative restriction enzyme modulator protein	Putative restriction enzyme modulator protein	McrC protein	Putative 5-methylcytosine-specific restriction enzyme subunit Mcr	5-methylcytosine-specific restriction enzyme McrBC, subunit McrC	5-methylcytosine-specific restriction enzyme McrBC, subunit McrC	Putative restriction enzyme modulator protein	5-methylcytosine restriction system component protein	5-methylcytosine-specific restriction enzyme subunit McrC	
ECOLI04192	5-methylcytosine-specific restriction enzyme B	AAA ATPase superfamily protein, fragment	5-methylcytosine-specific restriction enzyme McrBC, subunit McrB	McrB protein	5-methylcytosine-specific restriction enzyme McrBC, subunit McrB	ATPase associated with various cellular activities AAA_5	
ECOLI04193	Endoribonuclease symE	Hypothetical protein yjiW	Putative uncharacterized protein	Endoribonuclease symE	Residues 1 to 113 of 113 are 94 pct identical to residues 1 to 113 of a 113 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290961.1 orf, conserved hypothetical protein	LexA regulated, putative SOS response	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Endoribonuclease symE	Endoribonuclease symE	Endoribonuclease symE	conserved hypothetical protein	conserved hypothetical protein	Endoribonuclease symE	HSP20-like domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Endoribonuclease SymE	Endoribonuclease SymE	HSP20-like domain protein	Putative uncharacterized protein yjiW	Endoribonuclease symE	Putative uncharacterized protein yjiW	Putative uncharacterized protein yjiW	Putative uncharacterized protein yjiW	Predicted protein	Putative SOS response protein	pseudo	Conserved protein	
ECOLI04194	Type-1 restriction enzyme EcoKI specificity protein	Type I restriction enzyme (Specificity chain) homolog	Type I restriction-modification enzyme, S subunit	Putative type I restriction enzyme S.BthVORF4518AP	Type I restriction-modification system, S subunit	Subunit S of type I restriction-modification system	Type I restriction-modification enzyme S subunit	identified by match to protein family HMM PF01420 type I restriction-modification enzyme, S subunit, putative	Type I restriction-modification system, S subunit	Subunit S of type I restriction-modification system	PMID: 2642743 best DB hits: BLAST: swissprot:P19705; T1SE_ECOLI TYPE I RESTRICTION ENZYME ECOEI; E=5e-22 swissprot:P05719; T1SK_ECOLI TYPE I RESTRICTION ENZYME ECOKI; E=2e-18 swissprot:P06990; T1SB_ECOLI TYPE I RESTRICTION ENZYME ECOBI; E=1e-16 COG: hsdS; COG0732 Restriction endonuclease S subunits; E=1e-19 PFAM: PF01420; Type I restriction modification D; E=4.3e-18 type I restriction enzyme EcoEI specificity protein	Putative restriction-modification system specificity determinant	type I restriction-modification	identified by similarity to SP:P05719; match to protein family HMM PF01420 type I restriction-modification system, S subunit	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark Type I restriction enzyme StySPI specificity protein	similar to Salmonella typhi Ty2 subunit S of type I restriction-modification system subunit S of type I restriction-modification system	Putative uncharacterized protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type pe : putative enzyme putative type I restriction-modification system specificity determinant for hsdM and hsdR (HsdS)	Type-1 restriction enzyme StySJI specificity protein	Type I restriction-modification system (specificity subunit)	type I restriction enzyme (specificity chain) homolog	type I restriction-modification system specificity subunit	Restriction modification system DNA specificity domain	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative type I restriction-modification system, S subunit	type I restriction enzyme StySPI specificity protein	restriction modification system DNA specificity domain	restriction modification system DNA specificity protein	putative type I restriction enzyme specificity subunit similarity:fasta; with=UniProt:T1S_SALTY (EMBL:AE008913); Salmonella typhimurium.; hsdS; Type I restriction enzyme StySJI specificity protein (S protein) (S.StySJI). Type I restriction enzyme StySJI specificity protein (S protein) (S.StySJI).; length=469; id 33.128; 486 aa overlap; query 1-454; subject 1-468	Restriction modification system DNA specificity domain	
ECOLI04195	Type I restriction enzyme EcoKI M protein	Site-specific DNA-methyltransferase (Adenine- specific), subunit M	Probable type I restriction enzyme BthVORF4518P M protein	Type I restriction system adenine methylase	pseudo	Putative type I restriction-modification system, M subunit	identified by similarity to SP:P08957; match to protein family HMM PF02384; match to protein family HMM PF02506 type I restriction-modification system, M subunit	Type I restriction-modification system, M subunit	PMID: 1409708 PMID: 3025838 best DB hits: BLAST: swissprot:P07989; T1M_SALPO TYPE I RESTRICTION ENZYME STYSPI M; E=1e-135 gb:AAA23985.1; (L02508) restriction-modification enzyme type I M; E=1e-134 swissprot:P08957; T1MK_ECOLI TYPE I RESTRICTION ENZYME ECOKI M; E=1e-134 COG: hsdM; COG0286 Type I restriction-modification system; E=1e-135 PFAM: PF02506; Type I restriction modification s; E=0.00016 PF02384; N-6 DNA Methylase; E=7.2e-40 type I restriction enzyme StySPI M protein	type I restriction-modification system DNA methylase	Type I restriction-modification system, M subunit	Type I restriction-modification system methylation subunit	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark type I restriction-modification system, M subunit	similar to Salmonella typhimurium DNA methylase M, host modification DNA methylase M, host modification	Type I restriction-modification system	Type I restriction modification enzyme methylase subunit	Similar to Q8RN13 HsdM from Campylobacter jejuni (494 aa). FASTA: opt: 2001 Z-score: 2374.3 E(): 2.3e-124 Smith-Waterman score: 2001; 59.719 identity in 499 aa overlap. DNA-methyltransferase, type I restriction-modification enzyme subunit M	Type I restriction enzyme StySJI M protein	N-6 DNA methylase	type I restriction-modification system specificity subunit	N-6 DNA methylase	N-6 DNA methylase	N-6 DNA methylase	N-6 DNA methylase	putative type I restriction enzyme modification methylase subunit Similar to the N-terminus to codon 372 of Escherichia coli HsdM type I restriction enzyme EcoKI M protein (ec 2.1.1.72) (m.ecoki). UniProt:T1MK_ECOLI (EMBL:ECHSDRM) (529 aa), and N-terminus to codon 390 is similar to N-terminus to codon 360 is similar to Rhodopirellula baltica HsdM type I restriction enzyme Styspi M protein (ec 2.1.1.72). UniProt:Q7UK97 (507 aa).  This CDS overlaps 23 nt at the C-terminus with RL1098 and may be transcribed as part of a pseudogene with RL1098 or alternatively be transcribed as a separate gene. similarity:fasta; with=UniProt:T1MK_ECOLI (EMBL:ECHSDRM); Escherichia coli.; hsdM; Type I restriction enzyme EcoKI M protein (EC 2.1.1.72) (M.EcoKI).; length=529; id 49.383; 405 aa overlap; query 1-394; subject 1-371 similarity:fasta; with=UniProt:Q7UK97; Rhodopirellula baltica.; hsdM; Type I restriction enzyme StySPI M protein (EC 2.1.1.72).; length=507; id 52.538; 394 aa overlap; query 1-392; subject 1-359	N-6 DNA methylase PFAM: N-6 DNA methylase: (2.7e-181) KEGG: bte:BTH_I2743 type I restriction system adenine methylase, ev=0.0, 88% identity	type I restriction enzyme StySPI M protein Type I restriction enzyme StySPI M protein (M.StySPI) identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker	N-6 DNA methylase	transcriptional regulator, XRE family	
ECOLI04196	Type I restriction enzyme EcoKI R protein	Type I site-specific deoxyribonuclease	Subunit R of type I restriction-modification system	identified by similarity to SP:P08956; match to protein family HMM PF00271; match to protein family HMM PF04313 type I restriction-modification system, R subunit	Type I restriction-modification system, R subunit	PMID: 3323532 PMID: 1650347 best DB hits: BLAST: swissprot:P08956; T1RK_ECOLI TYPE I RESTRICTION ENZYME ECOKI R; E=0.0 embl:CAA29791.1; (X06545) hsdR gene product (AA 1 - 1090); E=1e-158 gb:AAF43698.1; AF232829_1 (AF232829) unknown [Mycobacterium avium]; E=8e-38 COG: hsdR; COG0610 Restriction enzymes type I helicase subunits and related; E=0.0 YDR332w; COG1061 DNA or RNA helicases of superfamily II; E=7e-14 jhp1424; COG0610 Restriction enzymes type I helicase subunits and; E=3e-04 PFAM: PF00270; DEAD/DEAH box helicase; E=0.047 PF00271; Helicase conserved C-terminal doma; E=1.3e-10 type I restriction enzyme EcoKI R protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark type I restriction-modification system, R subunit	similar to Salmonella typhi CT18 subunit R of type I restriction-modification system subunit R of type I restriction-modification system	Endonuclease R	type III restriction enzyme, res subunit	type III restriction enzyme, res subunit	putative type I restriction enzyme R subunit similarity:fasta; with=UniProt:T1RK_ECOLI (EMBL:U00096); Escherichia coli.; hsdR; Type I restriction enzyme EcoKI R protein (EC 3.1.21.3) (R.EcoKI).; length=1188; id 39.680; 1187 aa overlap; query 3-1131; subject 23-1184 similarity:fasta; with=UniProt:Q7UK96; Rhodopirellula baltica.; hsdR; Type I restriction enzyme EcoKI R protein (EC 3.1.21.3).; length=1138; id 43.794; 1144 aa overlap; query 4-1134; subject 13-1137	type I restriction-modification system R subunit identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker type I restriction-modification system, R subunit	Endonuclease R	type III restriction enzyme, res subunit PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein SMART: DEAD-like helicases-like KEGG: mbu:Mbur_0509 type III restriction enzyme, res subunit	Type III restriction enzyme, res subunit	type I restriction modification system, restriction subunit	type III restriction enzyme, res subunit PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein KEGG: son:SO4267 type I restriction-modification system, R subunit	Type I restriction-modification system, R subunit	Type I restriction enzyme EcoKI R protein	DNA methylase R	Type III restriction protein, res subunit	Type III restriction enzyme, res subunit	Type I restriction modification system	type III restriction enzyme, res subunit PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein SMART: DEAD-like helicases-like KEGG: rfr:Rfer_1062 type III restriction enzyme, res subunit	Type III restriction protein res subunit	Type III restriction protein res subunit	Putative uncharacterized protein	Type III restriction protein res subunit	
ECOLI04197	Mrr restriction system protein	Mrr restriction system protein	Mrr restriction endonuclease	Mrr restriction system protein	Mrr restriction system protein	Mrr restriction system protein	Mrr restriction system protein	Putative 5-methyladenine/5-methylcytosine- specific restriction endonuclease	Putative Mrr restriction system protein	CE3P012, similar to Swiss_Prot:P24202 percent identity: 41 in 282 aa putative restriction system protein	Mrr	Putative Mrr restriction system protein	mrr restriction system protein	Mrr restriction system protein	Mb2557c, mrr, len: 306 aa. Equivalent to Rv2528c, len: 306 aa, from Mycobacterium tuberculosis strain H37Rv, (99.7% identity in 306 aa overlap). Probable mrr, restriction system protein, similar to other mrr proteins e.g. Q9RWS8|DR0587|MRR from Deinococcus radiodurans (306 aa), FASTA scores: opt: 776, E(): 4.2e-40, (40.45% identity in 309 aa overlap); P24202|MRR_ECOLI|B4351 from Escherichia coli strain K12 (304 aa), FASTA scores: opt: 647, E(): 2.9e-32, (35.25% identity in 309 aa overlap); Q9RX07|DR0508 from Deinococcus radiodurans (336 aa), FASTA scores: opt: 456, E(): 1.3e-20, (37.3% identity in 319 aa overlap); etc. PROBABLE RESTRICTION SYSTEM PROTEIN MRR	similar to Salmonella typhi CT18 mrr restriction system protein mrr restriction system protein	pseudo	COG1715 mrr restriction system protein	Restriction of methylated adenine	Mrr restriction system protein (EcoKMrr).,Involved in the acceptance of foreign DNA which is modified.  Restricts both adenine- and cytosine-methylated DNA. mrr restriction system protein	5-methylcytosine-specific restriction enzyme	restriction endonuclease	mrr restriction system protein identified by similarity to SP:P24202; match to protein family HMM PF04471	restriction endonuclease	probable restriction system protein similar to mrr (Mb2557c) [Mycobacterium bovis subsp.  bovis AF2122/97] Similar to swissprot:Q7TYD4 Putative location:bacterial cytoplasm Psort-Score: 0.0864	restriction endonuclease	Mrr protein	Restriction endonuclease	restriction system protein mrr Mapped to H37Rv Rv2528c	
ECOLI04198	Uncharacterized GTP-binding protein yjiA	CobW-related protein	Putative uncharacterized protein	Putative uncharacterized protein	Cobalamin synthesis protein/P47K family protein	Low-affinity zinc transport protein	Cobalamin synthesis protein	Putative uncharacterized protein	Hypothetical protein yjiA	identified by match to protein family HMM PF02492 cobalamin synthesis protein/P47K family protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Cobalamin synthesis protein/P47K family protein	Putative uncharacterized protein	Cobalamin synthesis protein/P47K family protein	Putative uncharacterized protein	CDS_ID OB3433 hypothetical protein	BH0366 protein	Residues 14 to 331 of 331 are 99 pct identical to residues 1 to 318 of a 318 aa protein YJIA_ECOLI sp: P24203 orf, conserved hypothetical protein	Similar to cobalamin synthesis related protein	Putative cobalamin synthesis protein	identified by match to protein family HMM PF02492 cobalamin synthesis/P47K family protein	Cobalamin synthesis related protein	Cobalamin synthesis protein/P47K family protein	conserved hypothetical protein	putative cobalamin synthesis protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	similar to cobalamin synthesis related protein hypothetical protein	
ECOLI04199	Uncharacterized protein yjiX	Putative uncharacterized protein	Hypothetical protein yjiX	Putative uncharacterized protein	Uncharacterized protein yjiX	Residues 1 to 67 of 67 are 100 pct identical to residues 1 to 67 of a 67 aa protein from Escherichia coli O157:H7 ref: NP_313339.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative cytoplasmic protein	Code: S; COG: COG2879 conserved hypothetical protein	Code: S; COG: COG2879 conserved hypothetical protein	Code: S; COG: COG2879; orf conserved hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein Code: S; COG: COG2879	Putative uncharacterized protein	Putative uncharacterized protein yjiX	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative cytoplasmic protein	Putative uncharacterized protein	
ECOLI04200	Inner membrane protein yjiY	Carbon starvation protein A homolog	Carbon starvation protein A	Carbon starvation protein A	Carbon starvation protein A	Putative uncharacterized protein	Carbon starvation protein A	Probable carbon starvation protein	Hypothetical protein yjiY	Putative carbon starvation protein	PMID: 99411980 best DB hits: BLAST: ddbj:BAB05512.1; (AP001513) carbon starvation-induced protein; E=3e-82 swissprot:O67304; CSTA_AQUAE CARBON STARVATION PROTEIN A HOMOLOG; E=5e-65 pir:E75032; carbon starvation protein A homolog PAB1554 [similarity]; E=1e-53 COG: BH1793; COG1966 Carbon starvation protein, predicted membrane; E=3e-83 yjiY; COG1966 Carbon starvation protein, predicted membrane protein; E=2e-47 jhp1095; COG1966 Carbon starvation protein, predicted membrane; E=3e-47 PFAM: PF02554; Carbon starvation protein CstA; E=2.2e-104 carbon starvation-induced protein	Carbon starvation protein CstA	Putative carbon starvation protein	Carbon starvation-induced protein	Carbon starvation protein A	Residues 1 to 721 of 721 are 100 pct identical to residues 1 to 721 of a 721 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290969.1 putative carbon starvation protein	carbon starvation-induced protein	IPR003706: Carbon starvation protein CstA putative carbon starvation protein	similar to Salmonella typhi Ty2 probable carbon starvation protein carbon starvation protein A	Carbon starvation protein A	Carbon starvation protein CstA	Carbon starvation regulatory protein	Putative carbon starvation protein	carbon starvation protein A	identified by similarity to SP:P15078; match to protein family HMM PF02554 carbon starvation protein CstA	identified by similarity to SP:P15078; match to protein family HMM PF02554 carbon starvation protein CstA	Carbon starvation protein CstA	carbon starvation-induced protein	carbon starvation protein A	
ECOLI04201	Methyl-accepting chemotaxis protein I	Related to methyl-accepting chemotaxis protein	hypothetical Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein I	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein I, serine sensor receptor	Methyl-accepting chemotaxis receptor/sensory transducer	Residues 1 to 554 of 554 are 99 pct identical to residues 1 to 554 of a 554 aa protein from Escherichia coli O157:H7 ref: NP_313342.1 methyl-accepting chemotaxis protein I	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein I	methyl-accepting chemotaxis protein	IPR003660: Histidine kinase, HAMP region; IPR004089: Bacterial chemotaxis sensory transducer; IPR004090: Methyl-accepting chemotaxis protein;IPR004091: Aspartate chemoreceptor protein methyl-accepting chemotaxis protein I, serine sensor receptor	similar to Salmonella typhimurium methyl-accepting chemotaxis protein I, serine sensor receptor methyl-accepting chemotaxis protein I, serine sensor receptor	Methyl-accepting chemotaxis protein	Methyl-accepting chemotaxis protein with ligand-binding sensor domain and HAMP domain	Methyl-accepting chemotaxis protein I	identified by match to protein family HMM PF00015; match to protein family HMM PF00672 methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015; match to protein family HMM PF00672 methyl-accepting chemotaxis protein	chemotaxis sensory transducer	identified by match to protein family HMM PF00015; match to protein family HMM PF00672 methyl-accepting chemotaxis protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component putative Methyl-accepting or sensory transducer chemotaxis protein	serine sensor receptor; Code: NT; COG: COG0840 methyl-accepting chemotaxis protein I	methyl-accepting chemotaxis sensory transducer	Methyl-accepting chemotaxis protein COG0840	putative methyl accepting chemotaxis protein similarity:fasta; with=UniProt:Q9JN43_RHOSH (EMBL:RSCHECTOR); Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides).; mcpB; Methyl accepting chemotaxis protein.; length=560; id 41.815; 562 aa overlap; query 3-560; subject 10-555 similarity:fasta; with=UniProt:Q89SQ5_BRAJA (EMBL:BA000040); Bradyrhizobium japonicum.; mcpK; McpK protein.; length=565; id 50.086; 579 aa overlap; query 2-557; subject 11-564	Methyl-accepting chemotaxis sensory transducer precursor	Methyl-accepting chemotaxis protein I	
ECOLI04202	Inner membrane transport protein yjjL	hypothetical protein	Probable sugar transporter	Putative transport protein, cryptic, orf, joins former yjiZ and yjjL	Residues 1 to 453 of 453 are 99 pct identical to residues 1 to 453 of a 453 aa protein from Escherichia coli O157:H7 ref: NP_313343.1 putative transport protein	Similar to EXUT_BACSU (O34456) Hexuronate transporter from Bacillus subtilis (422 aa). FASTA: opt: 655 Z-score: 716.7 E(): 5e-32 Smith-Waterman score: 659; 28.250 identity in 400 aa overlap. ORF ftt1291 major facilitator superfamily (MFS) transport protein	Permeases of the major facilitator superfamily	putative membrane protein identified by match to protein family HMM PF07690	major facilitator superfamily (MFS) transport protein Similar to EXUT_BACSU (O34456) Hexuronate transporter from Bacillus subtilis (422 aa). FASTA: opt: 655 Z-score: 716.7 E(): 5e-32 Smith-Waterman score: 659; 28.250 identity in 400 aa overlap. ORF ftt1291	major facilitator superfamily MFS_1 PFAM: General substrate transporter; major facilitator superfamily MFS_1 KEGG: bur:Bcep18194_C7622 major facilitator superfamily, (MFS_1) family	MFS family major facilitator transporter	Hypothetical protein	major facilitator superfamily (MFS) transport protein	putative transport protein Code: GEPR; COG: COG0477	Lodderomyces elongisporus (LELG_04506.1) hypothetical protein (translation)	transcript_id=ENSMICT00000016402	Transporter, major facilitator family	Major facilitator superfamily MFS_1	Putative major facilitator superfamily transporter	jgi|Lotgi1|161078|fgenesh2_pg.C_sca_27000137	Transporter, major facilitator family	Major facilitator superfamily MFS_1	Transporter, major facilitator family	Sugar transporter, MFS superfamily	Major facilitator superfamily MFS_1	Major facilitator superfamily MFS_1	Transporter, major facilitator family	Transporter, major facilitator family	
ECOLI04203	Uncharacterized protein yjjM	Putative DNA-binding protein	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSCRIPTION REGULATOR PROTEIN	Putative uncharacterized protein yjjM	hypothetical protein, probable transcriptional regulator	Residues 37 to 304 of 304 are 99 pct identical to residues 1 to 268 of a 268 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290973.1 yjjM gene product	Transcriptional regulators GntR protein	Code: K; COG: COG1802 conserved hypothetical protein	Putative regulatory protein, GntR family	Code: K; COG: COG1802 conserved hypothetical protein	probable transcriptional regulator protein similar to SMc02777 [Sinorhizobium meliloti] Similar to swissprot:Q92TE0 Putative location:bacterial cytoplasm Psort-Score: 0.2890; go_component: intracellular [goid 0005622]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	Putative uncharacterized protein	Putative uncharacterized protein yjjM	transcriptional regulator, GntR family	putative transcriptional regulator	Transcriptional regulator, GntR family	transcriptional regulator, GntR family PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: rsp:RSP_1607 putative regulatory protein, GntR family	conserved hypothetical protein Code: K; COG: COG1802	putative DNA-binding transcriptional regulator	Transcriptional regulator, GntR family	Putative transcription regulator protein	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Transcriptional regulator, GntR-family	GntR domain protein	Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	
ECOLI04204	Uncharacterized zinc-type alcohol dehydrogenase- like protein yjjN	Hypothetical zinc-type alcohol dehydrogenase-like protein yjjN	Putative zinc-binding dehydrogenase	Putative oxidoreductase	L-iditol 2-dehydrogenase (EC 1.1.1.14)	sorbitol dehydrogenase, putative	Zinc-type alcohol dehydrogenase protein	Threonine dehydrogenase and related Zn-dependent dehydrogenases Tdh protein	Code: ER; COG: COG1063 putative oxidoreductase	COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases. Putative Zn-dependent dehydrogenase	Code: ER; COG: COG1063 putative oxidoreductase	Alcohol dehydrogenase GroES-like protein	Zinc-containing alcohol dehydrogenase superfamily	chlorobiumquinone synthase BchC related protein	putative alcohol dehydrogenase similarity:fasta; with=UniProt:RSPB_ECOLI (EMBL:I81185); Escherichia coli.; rspB; Starvation sensing protein rspB (EC 1.1.1.-).; length=339; id 36.278; 317 aa overlap; query 1-309; subject 1-309 similarity:fasta; with=UniProt:Q92TD4 (EMBL:SME591782); Rhizobium meliloti (Sinorhizobium meliloti).; PUTATIVE ZINC-TYPE ALCOHOL DEHYDROGENASE PROTEIN (EC 1.1.1.-).; length=338; id 69.617; 339 aa overlap; query 1-339; subject 1-337	Alcohol dehydrogenase GroES-like	Hypothetical zinc-type alcohol dehydrogenase-like protein YjjN	Alcohol dehydrogenase GroES-like	Hypothetical zinc-type alcohol dehydrogenase-like protein yjjN	Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: atc:AGR_C_5103 hypothetical zinc-type alcohol dehydrogenase-like protein in TSR-MDOB intergenic region	Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: bcn:Bcen_6469 alcohol dehydrogenase GroES-like	Chlorophyll synthesis pathway, BchC	Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein KEGG: rsp:RSP_1608 putative Zn-dependent dehydrogenase	putative oxidoreductase Code: ER; COG: COG1063	putative oxidoreductase, Zn-dependent and NAD(P)-binding	Putative alcohol dehydrogenase	Zinc-binding dehydrogenase	Alcohol dehydrogenase GroES domain protein	Oxidoreductase	
ECOLI04205	Phosphoglycerol transferase I	Phosphoglycerol transferase I	Phosphoglycerol transferase I	Residues 1 to 763 of 763 are 99 pct identical to residues 1 to 763 of a 763 aa protein MDOB_ECOLI sp: P39401 Phosphoglycerol transferase I (Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase)	phosphoglycerol transferase I	similar to Salmonella typhi CT18 putative phosphoglycerol transferase putative phosphoglycerol transferase	Phosphoglycerol transferase I	Code: M; COG: COG1368 phosphoglycerol transferase I	Code: M; COG: COG1368 phosphoglycerol transferase I	Code: M; COG: COG1368 phosphoglycerol transferase I	Phosphoglycerol transferase I	Phosphoglycerol transferase I	phosphoglycerol transferase I Code: M; COG: COG1368	phosphoglycerol transferase I	Phosphatidylglycerol-membrane-oligosaccharide glycerophosphotransferase	Phosphoglycerol transferase I	Putative uncharacterized protein	Phosphoglycerol transferase I	Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase precursor	pseudo	Phosphoglycerol transferase I	Phosphoglycerol transferase I	Phosphoglycerol transferase I	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Phosphoglycerol transferase I	Phosphoglycerol transferase I	Putative phosphoglycerol transferase	
ECOLI04206	Uncharacterized protein yjjA	Hypothetical protein yjjA	Putative glycoprotein/receptor	Residues 1 to 165 of 165 are 99 pct identical to residues 1 to 165 of a 165 aa protein from Escherichia coli K12 ref: NP_418780.1 putative glycoprotein-receptor	Putative exported protein	putative outer membrane protein	similar to Salmonella typhi CT18 putative secreted protein putative secreted protein	Putative glycoprotein/receptor	Putative outer membrane protein	putative glycoprotein/receptor	putative glycoprotein/receptor	putative glycoprotein/receptor	Putative uncharacterized protein	Hypothetical protein precursor	Putative uncharacterized protein yjjA	Hypothetical protein precursor	Hypothetical protein	putative glycoprotein/receptor	Hypothetical protein precursor	conserved hypothetical protein	conserved hypothetical protein KEGG: nmu:Nmul_A2600 hypothetical protein	Putative glycoprotein/receptor precursor	Putative outer membrane protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Conserved protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative glycoprotein/receptor precursor	
ECOLI04207	DNA replication protein dnaC	DNA replication protein dnaC	DNA replication protein dnaC	DNA replication protein dnaC	DNA replication protein dnaC	Lin1245 protein	Residues 1 to 245 of 245 are 100 pct identical to residues 1 to 245 of a 245 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290977.1 chromosome replication; initiation and chain elongation	Putative uncharacterized protein	phage-related protein DNA replication protein	chromosome replication; initiation and chain elongation	similar to Salmonella typhi CT18 probable DNA replication protein probable DNA replication protein	DNA replication protein dnaC	Chromosome replication protein	possible ATPase, AAA-superfamily	Code: L; COG: COG1484 chromosome replication; initiation and chain elongation	Code: L; COG: COG1484 chromosome replication; initiation and chain elongation	initiation and chain elongation; Code: L; COG: COG1484 chromosome replication	DNA replication protein, DNAC-like	DNA replication protein DnaC	IstB-like ATP-binding protein PFAM: IstB-like ATP-binding protein SMART: ATPase KEGG: bat:BAS3827 hypothetical protein	hypothetical protein similarity to COG1484 DNA replication protein	DnaC protein	AAA ATPase SMART: AAA ATPase KEGG: aba:Acid345_0060 DNA replication protein, DnaC-like	DNA replication protein COG_category L;COG_number COG1484; DnaC	DNA replication protein DnaC Code: L; COG: COG1484	Putative phage DNA replication protein	DNA replication protein DnaC	DNA replication protein DnaC	IstB domain protein ATP-binding protein	
ECOLI04208	Primosomal protein 1	Primosomal protein 1	Primosomal protein 1	Primosomal protein 1	Residues 1 to 149 of 149 are 100 pct identical to residues 31 to 179 of a 179 aa protein from Escherichia coli K12 ref: NP_418782.1 DNA biosynthesis; primosomal protein i	primosomal protein I	similar to Salmonella typhi CT18 primosomal protein I primosomal protein I	Primosomal protein 1	DNA biosynthesis primosomal protein i	DNA biosynthesis; primosomal protein i	primosomal protein i DNA biosynthesis	Primosomal protein 1	Primosomal protein 1	primosomal protein I	primosomal protein I	Primosomal protein I	Primosomal protein I	Putative uncharacterized protein	Primosomal protein 1	DNA biosynthesis protein	Primosomal protein 1	Primosomal protein 1	Primosomal protein 1	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Primosomal protein 1	Primosomal protein I	Primosomal protein 1	
ECOLI04209	UPF0442 protein yjjB	Putative uncharacterized protein	Putative integral membrane protein	Putative uncharacterized protein VV0474	UPF0442 protein yjjB	Protein yjjB	Putative uncharacterized protein	Putative uncharacterized protein	UPF0442 protein ECA3865	Putative uncharacterized protein VP0332	UPF0442 protein yjjB	CDS_ID OB2937 hypothetical protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Residues 6 to 162 of 162 are 86 pct identical to residues 1 to 157 of a 157 aa protein from Salmonella typhimurium LT2 ref: NP_463404.1 putative inner membrane protein	UPF0442 protein YPO0485/y3689/YP_3694	identified by similarity to GP:29338279 membrane protein, putative	COG3610 Uncharacterized conserved protein putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	UPF0442 protein YPTB0627	hypothetical protein	Similar to: HI0108, YJJP_HAEIN conserved hypothetical protein	Uncharacterized BCR Hypothetical protein	UPF0442 protein yjjB	Code: S; COG: COG3610 conserved hypothetical protein	Hypothetical integral membrane protein	Code: S; COG: COG3610 conserved hypothetical protein	
ECOLI04210	Inner membrane protein yjjP	Putative uncharacterized protein	Putative uncharacterized protein	Putative integral membrane protein	Putative uncharacterized protein VV0473	Putative membrane protein	Putative conserved membrane protein	Putative integral membrane protein	conserved hypothetical protein	Hypothetical protein yjjP	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	hypothetical conserved protein	Putative uncharacterized protein VP0331	Putative structural protein	CDS_ID OB2936 hypothetical protein	Membrane protein, putative	Putative uncharacterized protein	Uncharacterized conserved membrane protein	BH0081 protein	Putative uncharacterized protein	Putative conserved membrane protein	Residues 1 to 277 of 277 are 100 pct identical to residues 1 to 277 of a 277 aa protein from Escherichia coli K12 ref: NP_418784.1 putative structural protein	Putative membrane protein	Putative uncharacterized protein	Integral membrane protein	
ECOLI04211	Uncharacterized protein yjjQ	Hypothetical protein yjjQ	Uncharacterized protein yjjQ	Residues 6 to 194 of 194 are 100 pct identical to residues 53 to 241 of a 241 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290981.1 putative regulator	similar to Salmonella typhi CT18 conserved hypothetical regulatory protein conserved hypothetical regulatory protein	Putative LuxR/UhpA family transcriptional regulator	Code: TK; COG: COG2197 putative regulator	Putative transcriptional regulator	Putative uncharacterized protein yjjQ	putative regulator Code: TK; COG: COG2197	conserved hypothetical protein putative global regulator	Response regulator receiver protein	Putative regulator	Putative uncharacterized protein	Transcriptional regulator, LuxR family	Predicted DNA-binding transcriptional regulator	Transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Transcriptional regulator, LuxR family	Conserved hypothetical regulatory protein	Transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Conserved hypothetical regulatory protein	Transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	
ECOLI04212	Transcriptional activator protein bglJ	Transcriptional activator protein bglJ	2-component transcriptional regulator	Residues 1 to 225 of 225 are 99 pct identical to residues 1 to 225 of a 225 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290982.1 2-component transcriptional regulator	IPR000792: Bacterial regulatory protein, LuxR family transcriptional regulator (activator) of bgl operon (LuxR/UhpA family)	similar to Salmonella typhi CT18 conserved hypothetical regulatory protein conserved hypothetical regulatory protein	Transcriptional regulator (Activator) of bgl operon	Code: TK; COG: COG2197 2-component transcriptional regulator	Transcriptional activator protein BglJ	BglJ transcriptional regulator	2-component transcriptional regulator Code: TK; COG: COG2197	BglJ 2-component transcriptional regulator	Response regulator receiver protein	2-component transcriptional regulator	Putative uncharacterized protein	Transcriptional regulator, LuxR family	DNA-binding transcriptional activator	Transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Transcriptional regulator, LuxR family	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Conserved hypothetical regulatory protein	Bgl operon transcriptional activator	Bgl operon transcriptional activator	Bgl operon transcriptional activator	Conserved hypothetical regulatory protein	Transcriptional regulator, LuxR family	
ECOLI04213	Ferric iron reductase protein fhuF	Putative iron transport-related membrane protein	Ferric iron reductase protein fhuF	Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE TRANSPORT PROTEIN	Ferric iron reductase protein FhuF	Ferric iron reductase protein FhuF	Putative uncharacterized protein fhuF	Residues 1 to 262 of 262 are 97 pct identical to residues 1 to 262 of a 262 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290983.1 orf, conserved hypothetical protein	Putative ferric iron reductase	Ferric iron reductase protein FhuF	ferric hydrozamate transport, involved in reduction of ferric iron in cytoplasmic ferrioxamine B	similar to Salmonella typhi CT18 ferric iron reductase protein ferric iron reductase protein	Putative ferric iron reductase	Ferric hydrozamate transport protein	ferric iron reductase protein FhuF, putative	Ferric iron reductase	Code: R; COG: COG4114 conserved hypothetical protein	Code: R; COG: COG4114 conserved hypothetical protein	ferric iron reductase	Ferric iron reductase	Code: R; COG: COG4114; orf conserved hypothetical protein	putative ferric iron reductase protein Codon 70 to the C-terminus are similar to codons 70 to the C-terminus of Escherichia coli ferric iron reductase protein FhuF SWALL:FHUF_ECOLI (SWALL:P39405) (262 aa),and to Rhizobium leguminosarum putative iron reductase fhuF SWALL:Q93JP2 (EMBL:AJ315451) (262 aa) similarity:fasta; SWALL:FHUF_ECOLI (SWALL:P39405); Escherichia coli; ferric iron reductase protein FhuF; length 262 aa; id=27.13; ungapped id=28.87; E()=7.6e-08; 199 aa overlap; query 61-255 aa; subject 71-261 aa similarity:fasta; SWALL:Q93JP2 (EMBL:AJ315451); Rhizobium leguminosarum; putative iron reductase; fhuF; length 262 aa; id=86.87; ungapped id=86.87; E()=8.1e-96; 259 aa overlap; query 2-260 aa; subject 4-262 aa	Ferric iron reductase precursor	ferric iron reductase protein FhuF	ferric iron reductase protein Similar to FhuF [Rhizobium leguminosarum bv. viciae] Similar to entrez-protein:CAC48055.1 Putative location:bacterial cytoplasm Psort-Score: 0.2732	Ferric iron reductase protein FhuF	Ferric iron reductase protein, putative	Putative ferric iron reductase	Ferric iron reductase protein FhuF	
ECOLI04214	Uncharacterized protein yjjZ	Hypothetical protein	Putative membrane protein	Residues 38 to 115 of 115 are 98 pct identical to residues 1 to 78 of a 78 aa protein from Escherichia coli O157:H7 ref: NP_313355.1 orf, conserved hypothetical protein	Putative membrane protein	putative inner membrane protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative membrane protein	Putative inner membrane protein	putative inner membrane protein	putative inner membrane protein	orf conserved hypothetical protein	Putative uncharacterized protein	Putative membrane protein	Putative uncharacterized protein	Membrane protein	Putative membrane protein precursor	putative inner membrane protein	Membrane protein	conserved hypothetical protein	Putative uncharacterized protein precursor	Tryptophan-specific transport protein	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein precursor	Predicted protein	Putative membrane protein	Putative uncharacterized protein	Putative uncharacterized protein	
ECOLI04215	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	16S RNA G1207 methylase RsmC	Ribosomal RNA small subunit methyltransferase C	hypothetical 16S RNA G1207 methylase RsmC	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	Putative uncharacterized protein	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase c	Residues 1 to 343 of 343 are 98 pct identical to residues 1 to 343 of a 343 aa protein ref: NP_418788.1 Ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N2-)-methyltransferase) (16S rRNA m2G1207 methyltransferase)	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase C	rRNA (Guanine-N2-)-methyltransferase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ribosomal RNA small subunit methyltransferase C	IPR000051: SAM (and some other nucleotide) binding motif; IPR002052: N-6 Adenine-specific DNA methylase 16S rRNA m2G 1207 methylse	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Ribosomal RNA small subunit methyltransferase C	Ribosomal RNA small subunit methyltransferase c	Ribosomal RNA small subunit methyltransferase C	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207 methyltransferase)	
ECOLI04216	DNA polymerase III subunit psi	Hold	DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	Putative DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	Residues 1 to 113 of 113 are 99 pct identical to residues 25 to 137 of a 137 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290985.1 DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	similar to Salmonella typhi CT18 DNA polymerase III, psi subunit DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	Similar to: HI0011, HOLD_HAEIN DNA polymerase III, psi subunit	Hypothetical protein	DNA polymerase III, psi subunit	ortholog to Escherichia coli bnum: b4372; MultiFun: Information transfer 2.1.1 DNA polymerase III, psi subunit	Code: L; COG: COG3050 DNA polymerase III psi subunit	Code: L; COG: COG3050 DNA polymerase III psi subunit	DNA polymerase III psi subunit	Code: L; COG: COG3050 DNA polymerase III, psi subunit	DNA polymerase III, psi subunit	Hypothetical protein	DNA polymerase III, psi subunit	DNA-directed DNA polymerase	DNA polymerase III, psi subunit identified by similarity to SP:P28632	
ECOLI04217	Ribosomal-protein-alanine acetyltransferase	Acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	N-terminal acetyltransferase complex, subunit ARD1	Acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Putative ribosomal-protein-alanine acetyltransferase	Putative ribosomal-protein-alanine acetyltransferase	Putative ribosomal-protein-alanine acetyltransferase	RimI	Peptide n-acetyltransferase RimI	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Lmo2076 protein	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine N-acetyltransferase	Putative ribosomal-protein acetyltransferase	putative ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Pab N-terminal acetyltransferase	identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575 ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	Ribosomal-protein-alanine acetyltransferase	
ECOLI04218	5'-nucleotidase yjjG	Putative uncharacterized protein CPE0762	Putative uncharacterized protein	Putative uncharacterized protein	Predicted hydrolase	Hypothetical conserved protein	Putative uncharacterized protein	Hydrolase, haloacid dehalogenase-like family	Haloacid dehalogenase-like hydrolase	2-haloalkanoic acid dehalogenase	Hydrolase, haloacid dehalogenase-like family; possible 2-haloacid dehalogenase	putative haloacid dehalogenase-like hydrolase family protein	Hydrolase, haloacid dehalogenase-like family	Hypothetical protein yjjG	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549 hydrolase, haloacid dehalogenase-like family	Putative uncharacterized protein	HAD-superfamily hydrolase, subfamily IA, variant 1 protein family	Putative hydrolase	Putative hydrolase of the HAD superfamily	Hydrolase, haloacid dehalogenase-like family	Putative uncharacterized protein VPA0217	5'-nucleotidase yjjG	Putative uncharacterized protein	Predicted hydrolase	Residues 1 to 225 of 225 are 97 pct identical to residues 1 to 225 of a 225 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290987.1 putative phosphatase	Haloacid dehalogenase-like hydrolase family protein	Similar to 2-haloalkanoic acid dehalogenase	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549 hydrolase, haloacid dehalogenase-like family	putative hydrolase	
ECOLI04219	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide-chain-release factor RF-3	Peptide-chain-release factor RF-3	Peptide-chain-release factor RF-3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Peptide chain release factor 3	Translation elongation and release factors	Peptide chain release factor 3	PrfC protein	Peptide chain release factor 3	Peptide chain release factor 3	
ECOLI04220	Osmotically-inducible protein Y	Putative periplasmic protein	Putative uncharacterized protein	Osmotically inducible protein Y precursor	Transporter, putative	Osmotically inducible protein Y	Osmotically inducible protein Y domain protein	Putative hyperosmotically inducible periplasmic protein	Hyperosmotically inducible periplasmic protein	Residues 27 to 227 of 227 are 99 pct identical to residues 1 to 201 of a 201 aa protein from Escherichia coli K12 ref: NP_418793.1 hyperosmotically inducible periplasmic protein	Osmotically inducible protein Y	Similar to putative hyperosmotically inducible periplasmic proteins hypothetical protein	conserved gene osmotically inducible protein Y	Similar to putative hyperosmotically inducible periplasmic proteins hypothetical protein	IPR007055: Transport-associated domain hyperosmotically inducible periplasmic protein, RpoS-dependent stationary phase gene	similar to Salmonella typhi CT18 Putative periplasmic protein Putative periplasmic protein	Hyperosmotically inducible periplasmic protein, RpoS-dependent stationary phase gene	Hyperosmotically inducible periplasmic protein	Code: R; COG: COG2823 hyperosmotically inducible periplasmic protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy putative hyperosmotically inducible periplasmic protein	predicted periplasmic or secreted lipoprotein COG2823	Code: R; COG: COG2823 hyperosmotically inducible periplasmic protein	Putative phophoslipid binding protein	osmotically inducible protein Y domain protein identified by match to protein family HMM PF04972	Osmotically inducible protein Y	Transport-associated precursor	Transport-associated precursor	Osmotically inducible protein Y precursor	histidine kinase	
ECOLI04221	UPF0391 membrane protein ytjA	UPF0391 membrane protein XCC0220	UPF0391 membrane protein CC_0673	UPF0391 membrane protein PA5482	UPF0391 membrane protein ytjA	UPF0391 membrane protein BPSS2216	UPF0391 membrane protein ytjA	UPF0391 membrane protein BP1737	UPF0391 membrane protein BB3587	UPF0391 membrane protein ECA0470	UPF0391 membrane protein BPP3186	UPF0391 membrane protein BMEI0373	UPF0391 membrane protein VP0082	UPF0391 membrane protein ytjA	hypothetical protein	UPF0391 membrane protein RPA3505	Residues 5 to 63 of 63 are 100 pct identical to residues 1 to 59 of a 59 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290990.1 orf, conserved hypothetical protein	UPF0391 membrane protein YPO0432/y3747/YP_3749	UPF0391 membrane protein NE1120	UPF0391 membrane protein RSp1666	hypothetical protein	conserved gene transmembrane protein	hypothetical protein	Putative uncharacterized protein	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark conserved hypothetical protein	putative inner membrane protein	similar to Salmonella typhi CT18 hypothetical protein hypothetical protein	similar to BR1656, hypothetical protein hypothetical protein	UPF0391 membrane protein XAC0239	
ECOLI04222	Uncharacterized protein yjjU	Putative uncharacterized protein	Hypothetical protein yjjU	Putative uncharacterized protein yjjU	Putative uncharacterized protein	Residues 13 to 369 of 369 are 99 pct identical to residues 1 to 357 of a 357 aa protein from Escherichia coli K12 ref: NP_418794.1 orf, conserved hypothetical protein	Predicted esterase of the alpha-beta hydrolase superfamily	Similar to unknown protein YjjU of Escherichia coli	putative phosphoesterase	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	Putative uncharacterized protein yjjU	Putative phosphoesterase	Code: R; COG: COG4667 conserved hypothetical protein	Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type e : enzyme putative hydrolase similar to YjjU	Code: R; COG: COG4667 conserved hypothetical protein	Code: R; COG: COG4667; orf conserved hypothetical protein	Putative uncharacterized protein	Hypothetical protein	Patatin	Patatin	Putative uncharacterized protein yjjU	Hydrolase cytoplasmic protein	Hydrolase cytoplasmic protein	Hypothetical protein	Patatin PFAM: Patatin KEGG: she:Shewmr4_2385 patatin	Hypothetical protein	Patatin PFAM: Patatin KEGG: pha:PSHAb0541 putative hydrolase similar to YjjU	conserved hypothetical protein Code: R; COG: COG4667	Patatin PFAM: Patatin KEGG: sfr:Sfri_0718 patatin	
ECOLI04223	Uncharacterized deoxyribonuclease yjjV	Putative uncharacterized protein	Deoxyribonuclease	Putative uncharacterized protein	Uncharacterized deoxyribonuclease HI0081	TatD-related DNase	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	Mg-dependent DNase	Putative uncharacterized protein	Putative uncharacterized protein	Putative TatD related DNase	hypothetical protein	Hydrolase, TatD family	Putative deoxyribonuclease yjjV	Putative uncharacterized protein	Putative deoxyribonuclease	Putative deoxyribonuclease	Hydrolase, TatD family	Putative TatD-family deoxyribonuclease	Hydrolase, TatD family	Putative deoxyribonuclease	Hydrolase, TatD family	Putative hydrolase	Putative uncharacterized protein yjjV	Hydrolase, TatD family	Mg-dependent DNase	Residues 1 to 258 of 260 are 95 pct identical to residues 1 to 258 of a 259 aa protein from Escherichia coli K12 ref: NP_418795.1 Mg-dependent DNase	
ECOLI04224	Uncharacterized protein yjjW	Putative uncharacterized protein CPE0660	Pyruvate-formate lyase-activating enzyme	Putative uncharacterized protein	Hypothetical pyruvate formate lyase activating enzyme	Hypothetical protein yjjW	Radical activating enzyme	Pyruvate formate lyase activating enzyme	Putative activating enzyme	Pyruvate-formate lyase-activating enzyme	Residues 1 to 287 of 287 are 99 pct identical to residues 1 to 287 of a 287 aa protein from Escherichia coli K12 ref: NP_418796.1 putative activating enzyme	IPR000345: Cytochrome c heme-binding site; IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain; IPR001989: Radical-activating enzyme pyruvate formate lyase activating enzyme	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	pyruvate formate-lyase activating enzyme	Similar to: HI0520, Y520_HAEIN predicted pyruvate-formate lyase-activating enzyme	Pyruvate formate lyase activating enzyme	Code: O; COG: COG1180 putative activating enzyme	identified by similarity to SP:Q46267; match to protein family HMM PF00037; match to protein family HMM PF04055 putative pyruvate formate-lyase activating enzyme	Code: O; COG: COG1180 putative activating enzyme	Code: O; COG: COG1180 putative activating enzyme	Putative uncharacterized protein	4Fe-4S binding domain protein/radical SAM domain protein identified by match to protein family HMM PF00037; match to protein family HMM PF04055	4Fe-4S binding domain protein/radical SAM domain protein identified by match to protein family HMM PF00037; match to protein family HMM PF04055	Radical SAM domain protein	Putative uncharacterized protein yjjW	Radical SAM domain protein	pyruvate formate lyase activating enzyme identified by match to protein family HMM PF00037; match to protein family HMM PF04055	Pyruvate formate lyase activating enzyme	Radical SAM	
ECOLI04225	Uncharacterized protein yjjI	Putative uncharacterized protein CPE0659	Putative uncharacterized protein VV2063	Putative uncharacterized protein	conserved hypothetical protein	Hypothetical protein yjjI	Putative uncharacterized protein	Putative uncharacterized protein VP1380	Putative uncharacterized protein yjjI	Putative uncharacterized protein	Residues 1 to 513 of 513 are 99 pct identical to residues 1 to 516 of a 516 aa protein from Escherichia coli K12 ref: NP_418797.1 orf, conserved hypothetical protein	putative cytoplasmic protein	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	hypothetical protein	Similar to: HI0521, YJJI_HAEIN conserved hypothetical glycly radical protein	Putative cytoplasmic protein	conserved hypothetical protein	identified by similarity to PIR:AB1073 conserved hypothetical protein	conserved hypothetical protein	orf conserved hypothetical protein	Putative uncharacterized protein	conserved hypothetical protein identified by similarity to SP:P44744	conserved hypothetical protein identified by similarity to SP:P44744	Hypothetical protein	Putative uncharacterized protein yjjI	Hypothetical protein	conserved hypothetical protein	Hypothetical protein	Hypothetical protein	
ECOLI04224	Uncharacterized protein yjjW	Putative uncharacterized protein CPE0660	Pyruvate-formate lyase-activating enzyme	Putative uncharacterized protein	Hypothetical pyruvate formate lyase activating enzyme	Hypothetical protein yjjW	Radical activating enzyme	Pyruvate formate lyase activating enzyme	Putative activating enzyme	Pyruvate-formate lyase-activating enzyme	Residues 1 to 287 of 287 are 99 pct identical to residues 1 to 287 of a 287 aa protein from Escherichia coli K12 ref: NP_418796.1 putative activating enzyme	IPR000345: Cytochrome c heme-binding site; IPR001450: 4Fe-4S ferredoxin, iron-sulfur binding domain; IPR001989: Radical-activating enzyme pyruvate formate lyase activating enzyme	similar to Salmonella typhi CT18 conserved hypothetical protein conserved hypothetical protein	pyruvate formate-lyase activating enzyme	Similar to: HI0520, Y520_HAEIN predicted pyruvate-formate lyase-activating enzyme	Pyruvate formate lyase activating enzyme	Code: O; COG: COG1180 putative activating enzyme	identified by similarity to SP:Q46267; match to protein family HMM PF00037; match to protein family HMM PF04055 putative pyruvate formate-lyase activating enzyme	Code: O; COG: COG1180 putative activating enzyme	Code: O; COG: COG1180 putative activating enzyme	Putative uncharacterized protein	4Fe-4S binding domain protein/radical SAM domain protein identified by match to protein family HMM PF00037; match to protein family HMM PF04055	4Fe-4S binding domain protein/radical SAM domain protein identified by match to protein family HMM PF00037; match to protein family HMM PF04055	Radical SAM domain protein	Putative uncharacterized protein yjjW	Radical SAM domain protein	pyruvate formate lyase activating enzyme identified by match to protein family HMM PF00037; match to protein family HMM PF04055	Pyruvate formate lyase activating enzyme	Radical SAM	
ECOLI04226	Deoxyribose-phosphate aldolase	Putative deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase 2	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	Putative deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	putative Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	CDS_ID OB2751 deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase 2	Deoxyribose-phosphate aldolase	Residues 9 to 267 of 267 are 99 pct identical to residues 1 to 259 of a 259 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_290995.1 2-deoxyribose-5-phosphate aldolase	Deoxyribose-phosphate aldolase 2	Deoxyribose-phosphate aldolase	Similar to 2-deoxyribose-5-phosphate aldolase hypothetical protein	conserved gene 2-deoxyribose-5-phosphate aldolase	Similar to 2-deoxyribose-5-phosphate aldolase hypothetical protein	Deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase	IPR002915: Deoxyribose-phosphate aldolase 2-deoxyribose-5-phosphate aldolase	
ECOLI04227	Thymidine phosphorylase	Thymidine phosphorylase	Putative thymidine phosphorylase	Pyrimidine-nucleoside phosphorylase	Pyrimidine-nucleoside phosphorylase	Pyrimidine-nucleoside phosphorylase	Thymidine phosphorylase	Pyrimidine-nucleoside phosphorylase	Thymidine phosphorylase	Thymidine phosphorylase	Pdp protein	Thymidine phosphorylase	putative thymidine phosphorylase	Pyrimidine-nucleoside phosphorylase	Thymidine phosphorylase	Pyrimidine-nucleoside phosphorylase	Thymidine phosphorylase	Thymidine phosphorylase	Thymidine phosphorylase	Pyrimidine nucleoside phosphorylase	PMID: 8987664 PMID: 9817849 PMID: 8987664 best DB hits: BLAST: pdb:1BRW; B Chain B, The Crystal Structure Of Pyrimidine; E=3e-70 swissprot:P77836; PDP_BACST PYRIMIDINE-NUCLEOSIDE PHOSPHORYLASE; E=3e-69 swissprot:O53366; DEOA_MYCTU THYMIDINE PHOSPHORYLASE (TDRPASE); E=1e-68 COG: Rv3314c; COG0213 Thymidine phosphorylase; E=1e-69 PFAM: PF02885; Glycosyl transferase family,; E=1.4e-15 PF00591; Glycosyl transferase family,; E=6.1e-39 pyrimidine-nucleoside phosphorylase (PYNP)	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE THYMIDINE PHOSPHORYLASE TRANSMEMBRANE PROTEIN	Pyrimidine-nucleoside phosphorylase	pyrimidine-nucleoside phosphorylase (PYNP)	Putative thymidine phosphorylase	Thymidine phosphorylase	Thymidine phosphorylase	Thymidine phosphorylase	Pyrimidine (Thymidine)-nucleoside phosphorylase	
ECOLI04228	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	putative phosphopentomutase	Phosphopentomutase	Phosphopentomutase	identified by match to protein family HMM PF01676; match to protein family HMM TIGR01696 phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE PHOSPHOPENTOMUTASE PROTEIN	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	Phosphopentomutase	
ECOLI04229	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase	Probable purine nucleoside phosphorylase	Purine nucleoside phosphorylase	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type 1	Purine nucleoside phosphorylase	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	putative purine nucleoside phosphorylase	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase, family 1	identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107 purine nucleoside phosphorylase	Purine nucleoside phosphorylase deoD-type 1	Purine nucleoside phosphorylase deoD-type 2	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	Purine nucleoside phosphorylase deoD-type	purine-nucleoside phosphorylase	Putative purine nucleoside phosphorylase	Purine nucleoside phosphorylase	
ECOLI04230	Uncharacterized protein yjjJ	Hypothetical protein yjjJ	Hypothetical protein yjjJ	conserved hypothetical protein	Putative uncharacterized protein yjjJ	HipA-like	HipA domain protein	conserved hypothetical protein identified by match to protein family HMM PF07804; match to protein family HMM PF07805	Putative DNA-binding protein	predicted DNA-binding transcriptional regulator	HipA domain protein	Predicted DNA-binding transcriptional regulator	HipA domain protein	Putative uncharacterized protein	HipA domain protein	Putative uncharacterized protein yjjJ	HipA domain protein	Putative uncharacterized protein	HipA domain protein	pseudo	Putative DNA-binding transcriptional regulator	Putative DNA-binding transcriptional regulator	HipA domain protein	Putative uncharacterized protein	Putative uncharacterized protein	Predicted DNA-binding transcriptional regulator	Putative DNA-binding protein	
ECOLI04231	Lipoate-protein ligase A	Putative lipoate-protein ligase A [Source:GeneDB_Spombe;Acc:SPBC17A3.09c]	similar to sp|P47051 Saccharomyces cerevisiae YJL046w singleton, hypothetical start	lipoate-protein ligase a, putative	Probable lipoate-protein ligase A	Probable lipoate-protein ligase A	similar to uniprot|P47051 Saccharomyces cerevisiae YJL046w;	Lipoate-protein ligase	Lipoate-protein ligase A	Putative lipoate-protein ligase A	Lipoate-protein ligase A	Lipoate-protein ligase A	putative lipoate-protein ligase A	Lipoate-protein ligase A	Lipoate-protein ligase A	Putative lipoate-protein ligase	identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545 lipoate-protein ligase A, putative	Lipoate-protein ligase A	conserved hypothetical protein	Lipoate-protein ligase	Lipoate-protein ligase A	Putative lipoate-protein ligase	Lipoate-protein ligase	Putative lipoate-protein ligase	Lipoate-protein ligase A	CDS_ID OB1174 lipoate protein ligase	LIPOATE-PROTEIN LIGASE A	Lipoate-protein ligase	Lipoate-protein ligase	
ECOLI04232	Protein smp	Putative Smp protein	Protein smp	putative SerB-cotransposed membrane protein precursor	Protein smp	Smp protein, putative	Putative membrane protein	Putative smp protein	Protein smp	Smp-like protein	Residues 1 to 214 of 214 are 100 pct identical to residues 1 to 214 of a 214 aa protein from Escherichia coli K12 ref: NP_418804.1 orf, conserved hypothetical protein	Protein smp	Protein Smp	membrane protein, transcribed divergently from serB	similar to Salmonella typhi CT18 putative membrane protein putative membrane protein	Membrane protein, transcribed divergently from serB	SMP protein precursor	Hypothetical protein	Protein smp	AphA (smp-like) protein	Code: R; COG: COG3726 conserved hypothetical protein	Code: R; COG: COG3726 conserved hypothetical protein	Code: R; COG: COG3726; orf conserved hypothetical protein	Protein Smp	Putative membrane protein precursor	Smp protein	Hypothetical protein aphA	Membrane protein precursor	Putative membrane protein precursor	
ECOLI04233	Phosphoserine phosphatase	hypothetical protein;similar to phosphoserine phosphohydrolase;	Phosphoserine phosphatase of the phosphoglycerate pathway, involved in serine and glycine biosynthesis, expression is regulated by the available nitrogen source.  [Source:SGD;Acc:S000003440]	similar to sp|P42941 Saccharomyces cerevisiae Phosphoserine phosphatase (EC 3.1.3.3), start by similarity	Phosphoserine phosphatase	Probable phosphoserine phosphatase [Source:GeneDB_Spombe;Acc:SPBC3H7.07c]	similar to sp|P42941 Saccharomyces cerevisiae YGR208w SER2 phosphoserine phosphatase singleton, start by similarity	Phosphoserine phosphatase	Putative phosphoserine phosphatase	Phosphoserine phosphatase	Phosphoserine phosphatase	Phosphoserine phosphatase	DEHA2G03850p;similar to uniprot|P42941 Saccharomyces cerevisiae YGR208w Phosphoserine phosphatase;	Probable phosphoserine phosphatase	Phosphoserine phosphatase	Phosphoserine phosphatase	SerB	Putative phosphoserine phosphatase	Phosphoserine phosphatase	Phosphoserine phosphatase	Putative phosphoserine phosphatase	Putative phosphoserine phosphatase	putative phosphoserine phosphatase	Phosphoserine phosphatase	identified by match to TIGR protein family HMM TIGR01670 phosphoserine phosphatase	Phosphoserine phosphatase	Phosphoserine phosphatase	Phosphoserine phosphatase	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PHOSPHOSERINE PHOSPHATASE PROTEIN	
ECOLI04234	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA homolog	DNA repair protein radA	DNA repair protein radA homolog	similar to GB:M16117, GB:J04990, SP:P08311, PID:179915,  and PID:181182; identified by sequence similarity; putative DNA repair protein	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA homolog	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA homolog	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA homolog	DNA repair protein radA homolog	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	DNA repair protein radA	
ECOLI04235	Transcriptional regulator nadR	NadR	Conserved hypothetical transcriptional regulator	Transcriptional regulator nadR	Transcriptional regulator of NAD metabolism	Probable nadAB transcriptional regulator	Residues 1 to 416 of 417 are 99 pct identical to residues 1 to 416 of a 417 aa protein from Escherichia coli K12 ref: NP_418807.1 probable nadAB transcriptional regulator	Transcriptional regulator NadR	Transcriptional regulator NadR	POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN NADR	Mb0218c, nadR, len: 323 aa. Equivalent to Rv0212c, len: 323 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 323 aa overlap). Possible nadR (alternate gene name: nadI), transcriptional regulator, similar to others e.g. NADR_ECOLI|P27278 transcriptional regulator from Escherichia coli (410 aa), FASTA scores: opt: 377, E (): 1e-17, (31.1% identity in 347 aa overlap).  Contains PS00017 ATP/GTP-binding site motif A (P-loop). POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN NADR (PROBABLY ASNC-FAMILY)	Transcriptional regulator	IPR002086: Aldehyde dehydrogenase three acitivities: regulator of nadAB transcription, regulator of PnuC activity, also contains NMN adenylyltransferase activity	similar to Salmonella typhi CT18 conserved hypothetical transcriptional regulator conserved hypothetical transcriptional regulator	Transcriptional regulator NadR	NMN adenylyltransferase; ribosylnicotinamide kinase; NMNAT; RNK; Similar to: HI0763, NADR_HAEIN bifunctional protein NadR	Nicotinamide mononucleotide-binding domain NadR protein	Transcriptional regulator nadR	Code: H; COG: COG3172 probable nadAB transcriptional regulator	Code: H; COG: COG3172 probable nadAB transcriptional regulator	predicted ATPase/kinase involved in NAD metabolism COG3172	Code: H; COG: COG3172 probable nadAB transcriptional regulator	Transcriptional regulator NadR	Transcriptional regulator NadR	Transcriptional regulator NadR	Transcriptional regulator	NMN adenylytransferase and ribosylnicotinamide kinase, NadR ortholog	NMN adenylytransferase and ribosylnicotinamide kinase, NadR ortholog	NMN adenylytransferase and ribosylnicotinamide kinase, NadR ortholog	

ECOLI04236	Uncharacterized ABC transporter ATP-binding protein yjjK	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter ATP-binding protein	Uncharacterized ABC transporter ATP-binding protein HI1252	ABC transporter ATP-binding protein	Putative ABC transporter ATP-binding protein	ATP binding protein of ABC transporter	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	ABC transporter, ATP-binding protein	Putative uncharacterized protein	Probable ATP-binding component of ABC transporter	ABC-type transport system, ATPase component	ABC transporter, nucleotide binding/ATPase protein	Conserved hypothetical ABC transporter	Probable ABC transporter, ATP-binding protein	ABC-transporter protein, ATP binding component	ABC transporter ATP-binding protein	Putative ABC transporter ATP-binding subunit	putative ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein yjjK	similar to GP:15075223, and GP:13129540; identified by sequence similarity; putative ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein	pseudo	Putative ABC transport ATP-binding subunit	
ECOLI04237	Soluble lytic murein transglycosylase	Soluble lytic murein transglycosylase	Putative soluble lytic murein transglycosylase	Putative uncharacterized protein	Probable soluble lytic transglycosylase	Soluble lytic murein transglycosylase	Lytic murein transglycosylase	Putative transglycosylase	hypothetical soluble lytic murein transglycosylase	Soluble lytic murein transglycosylase	Soluble lytic murein transglycosylase	Putative transglycosylase	Putative transglycosylase	Soluble lytic murein transglycosylase, putative	Soluble lytic murein transglycosylase	Soluble lytic murein transglycosylase, putative	Putative transglycosylase	Lytic murein transglycosylase, putative	Soluble lytic murein transglycosylase	Soluble lytic murein transglycosylase	Soluble lytic murein transglycosylase	Residues 2 to 655 of 655 are 99 pct identical to residues 1 to 654 of a 654 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_291005.1 soluble lytic murein transglycosylase	Putative soluble lytic murein transglycosylase	SLT domain	Probable soluble lytic murein transglycosylase transmembrane protein	Soluble lytic murein transglycosylase	Similar to soluble lytic murein transglycosylase hypothetical protein	conserved gene soluble lytic murein transglycosylase	Similar to soluble lytic murein transglycosylase hypothetical protein	
ECOLI04238	Trp operon repressor	Trp operon repressor homolog	Trp operon repressor homolog	Trp operon repressor	putative trp operon repressor	Trp operon repressor	Trp operon repressor homolog	Trp operon repressor	Trp operon repressor homolog	Trp operon repressor	Trp operon repressor	Trp operon repressor homolog	Residues 1 to 108 of 108 are 100 pct identical to residues 1 to 108 of a 108 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_291006.1 regulator for trp operon and aroH; trp aporepressor	Trp operon repressor homolog	Trp operon repressor	Trp operon repressor	IPR000831: Trp repressor transcriptional repressor for trp operon and aroH (TrpR family)	similar to Salmonella typhi CT18 probable trp operon repressor probable trp operon repressor	Trp operon repressor	Trp operon repressor	Similar to: HI0830, TRPR_HAEIN Trp operon repressor	Trp operon repressor TrpR protein	Similar to TRPR_ECOLI (P03032) Trp operon repressor from E. coli (107 aa). FASTA: opt: 175 Z-score: 239.1 E(): 2e-05 Smith-Waterman score: 175; 32.584 identity in 89 aa overlap trp operon repressor	Trp operon repressor	Code: K; COG: COG2973 regulator for trp operon and aroH; trp aporepressor	trp aporepressor; Code: K; COG: COG2973 regulator for trp operon and aroH	tryptophan operon repressor	trp aporepressor; Code: K; COG: COG2973 regulator for trp operon and aroH	Trp operon repressor	
ECOLI04239	UPF0244 protein yjjX	UPF0244 protein PAE2808	UPF0244 protein SSO2230	UPF0244 protein AF_0901	UPF0244 protein MTH_1897	UPF0244 protein MK1503	Putative uncharacterized protein	hypothetical protein	UPF0244 protein VV0708	pseudo	Putative uncharacterized protein	Putative uncharacterized protein	Putative uncharacterized protein	conserved hypothetical protein	UPF0244 protein yjjX	identified by match to protein family HMM PF01931 conserved hypothetical protein	UPF0244 protein VC_0702	UPF0244 protein SO_0917	UPF0244 protein ECA3898	hypothetical conserved protein	UPF0244 protein VP0554	UPF0244 protein yjjX	CDS_ID OB2237 hypothetical protein	UPF0244 protein BH3256	UPF0244 protein VV1_0488	similar to Escherichia coli K12 orf, conserved hypothetical protein gi: 1790855 (174 aa). BLAST with identity of 95% in 172 aa. This CDS ontains frameshift.  The sequence has been checked and is believed to be correct. pseudo	UPF0244 protein YPO0454/y3725/YP_3729	hypothetical protein, conserved, DUF84 family	UPF0244 protein plu0558	
ECOLI04241	Right origin-binding protein	Transcriptional regulator, AraC family	Right origin-binding protein	Right origin-binding protein	Right origin-binding protein	Right origin-binding protein	Transcriptional regulator, AraC type; possible DNA gyrase inhibitor	Residues 1 to 289 of 289 are 100 pct identical to residues 1 to 289 of a 289 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_291009.1 right origin-binding protein	Putative right origin-binding protein	Right origin-binding protein	Transcriptional regulator protein	IPR000005: Helix-turn-helix, AraC type transcriptional regulator (AraC/XylS family)	similar to Salmonella typhi CT18 right origin-binding protein right origin-binding protein	Putative transcriptional activator for resistance to antibiotics, organic solvents and heavy metals	Transcriptional regulator, AraC family	Transcriptional regulator	Code: K; COG: COG2207 right origin-binding protein	Code: K; COG: COG2207 right origin-binding protein	transcriptional regulator, AraC family	Code: K; COG: COG2207 right origin-binding protein	putative AraC family transcriptional regulator similarity:fasta; with=UniProt:Q92LW2_RHIME (EMBL:SME591792); Rhizobium meliloti (Sinorhizobium meliloti).; PUTATIVE TRANSCRIPTION REGULATOR PROTEIN.; length=279; id 66.187; 278 aa overlap; query 1-278; subject 1-278	Transcriptional regulator, AraC family	transcriptional regulator, AraC family PFAM: helix-turn-helix, AraC type: (1e-07) transcription activator, effector binding: (9.1e-39) KEGG: sil:SPO3615 transcriptional regulator, AraC family, ev=1e-101, 64% identity	probable transcriptional regulator protein, AraC family similar to SMc03170 [Sinorhizobium meliloti] Similar to swissprot:Q92LW2 Putative location:bacterial cytoplasm Psort-Score: 0.2583; go_component: intracellular [goid 0005622]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355]	Right origin-binding protein	Putative right origin-binding protein	Right origin-binding protein	Right origin-binding protein	transcriptional regulator, AraC family PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding KEGG: bcn:Bcen_2929 transcriptional regulator, AraC family	
ECOLI04240	Probable phosphoglycerate mutase gpmB	Putative uncharacterized protein	highly similar to uniprot|Q12040 Saccharomyces cerevisiae YOR283w;	Phosphoglycerate mutase	Putative phosphoglycerate mutase	Putative phosphoglycerate mutase family protein	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	Phosphoglycerate mutase family protein	Phosphoglycerate mutase family protein	Putative uncharacterized protein	Phosphoglycerate mutase	Fructose-2;6-bisphosphatase	Phosphoglycerate mutase	Probable phosphoglycerate mutase gpmB	Phosphoglycerate mutase	Phosphoglycerate mutase family protein	Related to phosphoglycerate mutase	Phosphoglycerate mutase/fructose-2,6- bisphosphatase	Phosphoglycerate mutase	Phosphoglycerate mutase family protein	Putative phosphoglycerate mutase	Probable phosphoglycerate mutase gpmB	phosphoglycerate mutase	identified by match to protein family HMM PF00300 phosphoglycerate mutase family protein	Probable phosphoglycerate mutase	glimmer prediction, AUG start may be part of transcription unit with SMA0522, SMA0523, SMA0525, SMA0526, SMA0527. match to E. coli gpmB phosphoglycerate mutase (1e-20, 8/2000) and to E. coli cobC alpha-ribazole-5'-phosphate phosphatase (2e-15, 8/2000) over 85% of predicted coding region phosphoglycerate mutase, putative	Putative phosphoglycerate mutase	Phosphoglycerate mutase, putative	Conserved protein, phosphoglycerate mutase family protein	
ECOLI04242	Protein creA	CreA protein	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Putative uncharacterized protein	Putative uncharacterized protein creA	Probable CreA protein	Putative exported protein	conserved hypothetical protein	Protein creA	similar to GP:15157206, and GP:14022272; identified by sequence similarity; putative conserved hypothetical protein	CreA protein	CreA protein	CreA protein	Putative exported protein	Product confidence : putative Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE CREA PROTEIN	CreA protein	CreA protein	CREA PROTEIN	CreA protein	Protein creA	hypothetical protein	Putative uncharacterized protein	Uncharacterized protein conserved in bacteria	Residues 1 to 157 of 157 are 100 pct identical to residues 1 to 157 of a 157 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_291010.1 orf, conserved hypothetical protein	Putative exported protein	Putative uncharacterized protein	Putative crea signal peptide protein	CreA protein	
ECOLI04243	Transcriptional regulatory protein creB	Transcriptional Regulatory protein creB	Catabolic regulation response regulator	Residues 1 to 229 of 229 are 98 pct identical to residues 1 to 229 of a 229 aa protein from Escherichia coli K12 ref: NP_418815.1 catabolic regulation response regulator	Putative response regulator	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response regulator in two-component regulatory system with CreC (OmpR family)	similar to Salmonella typhi CT18 putative two-component response regulator putative two-component response regulator	Putative response regulator CreB family	Response regulator in two-component regulatory system with CreC	Code: TK; COG: COG0745 catabolic regulation response regulator	Code: TK; COG: COG0745 catabolic regulation response regulator	Code: TK; COG: COG0745 catabolic regulation response regulator	Transcriptional regulatory protein CreB	Putative response regulator	Transcriptional regulatory protein CreB	Response regulator	transcriptional regulatory protein CreB identified by match to protein family HMM PF00072; match to protein family HMM PF00486	Putative response regulator	Two-component system blr regulon response regulator	catabolic regulation response regulator Code: TK; COG: COG0745	Response regulator	catabolic regulation response regulator CreB	Two component transcriptional regulator, winged helix family precursor	Catabolic regulation response regulator	Transcriptional regulatory protein CreB	Two-component response regulator CreB	DNA-binding response regulator in two-component regulatory system with CreC	Transcriptional regulatory protein CreB	Two component transcriptional regulator, winged helix family precursor	
ECOLI04244	Sensor protein creC	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein	Sensor protein creC	similar to GP:14027143, and GP:14027143; identified by sequence similarity; putative sensor histidine kinase	PMID: 11157922 PMID: 10360571 best DB hits: BLAST: pir:C72228; sensor histidine kinase HpkA - Thermotoga maritima; E=1e-16 swissprot:P23545; PHOR_BACSU ALKALINE PHOSPHATASE SYNTHESIS SENSOR; E=2e-16 gb:AAF70313.1; AF260326_2 (AF260326) SrrB [Staphylococcus aureus]; E=3e-16 COG: TM1654_2; COG0642 Sensory transduction histidine kinases; E=1e-17 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=1.8e-16 PF02518; Histidine kinase-, DNA gyrase B-, p; E=2e-27 sensor histidine kinase	Sensor protein	Sensor protein	two-component sensor histidine kinase	Sensor protein	Sensor protein	Residues 1 to 474 of 474 are 98 pct identical to residues 1 to 474 of a 474 aa protein from Escherichia coli K12 ref: NP_418816.1 catabolite repression sensor kinase for PhoB; alternative sensor for pho regulon	Sensor protein	two-component sensor histidine kinase	identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark two-component system sensor protein	IPR003660: Histidine kinase, HAMP region; IPR004358: Bacterial sensor protein, C-terminal; IPR005467: Histidine kinase sensory kinase (alternative) in two-component regulatory system with CreB (or alternatively PhoB), senses catabolite repression,	similar to Salmonella typhi CT18 putative two-component sensor kinase putative two-component sensor kinase	similar to BR0605, sensor histidine kinase sensor histidine kinase	Sensor protein	Sensor protein	two component system histidine kinase	Sensor protein	two-component system sensor protein	identified by similarity to SP:P08401; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 sensor histidine kinase CreE	
ECOLI04245	Inner membrane protein creD	Inner membrane protein	Inner membrane protein	Inner membrane protein CreD	Inner membrane protein CreD-like protein	Putative uncharacterized protein	Inner membrane protein CreD	Inner membrane protein creD	Inner membrane protein, putative	Tolerance to colicin E2	Putative uncharacterized protein	Residues 1 to 450 of 450 are 98 pct identical to residues 1 to 450 of a 450 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_291013.1 tolerance to colicin E2	Putative membrane protein	IPR000531: TonB-dependent receptor protein tolerance to colicin E2	similar to Salmonella typhi CT18 inner membrane protein CreD inner membrane protein CreD	Inner membrane protein	Putative membrane protein	Tolerance to colicin E2 protein	inner membrane protein	identified by match to protein family HMM PF06123 inner membrane protein CreD	Inner membrane CreD	Inner membrane CreD	Code: V; COG: COG4452 inner membrane protein	Code: V; COG: COG4452 tolerance to colicin E2	Inner membrane CreD	Inner membrane protein CreD	Inner membrane protein involved in colicin E2 resistance COG4452	Inner membrane CreD precursor	Inner membrane protein CreD	
ECOLI04246	Aerobic respiration control protein arcA	ArcA	Aerobic respiration control protein FexA	Global response regulator	putative aerobic respiration control protein FexA	Aerobic respiration control protein arcA	Aerobic respiration control protein FexA	Aerobic respiration control protein ArcA	Aerobic respiration control protein	Aerobic respiration control protein FexA	Aerobic respiration control protein arcA	Aerobic respiration control protein FexA	Residues 1 to 200 of 200 are 100 pct identical to residues 39 to 238 of a 238 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_291014.1 negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA)	Aerobic respiration control protein	Negative response regulator of genes in aerobic pathways,	IPR001789: Response regulator receiver; IPR001867: Transcriptional regulatory protein, C terminal response regulator (OmpR family) in two-component regulatory system with ArcB (or CpxA), regulates genes in aerobic pathways	similar to Salmonella typhi CT18 global response regulator global response regulator	Response regulator (OmpR family), in two- component regulatory system with ArcB (Or CpxA), regulates genes in aerobic respiration	aerobic respiration control protein ArcA	Similar to: HI0884, ARCA_HAEIN aerobic respiration control protein ArcA	Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain OmpR protein	Response regulator (CheY,wHTH domains)	Response regulator (OmpR family) in two-component regulatory system with ArcB	aerobic respiration control protein ArcA	Code: TK; COG: COG0745 negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA)	Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2984198, 7565118; Product type r : regulator aerobic respiration control protein arcA (Dye resistance protein)	sensors, ArcB and CpxA; Code: TK; COG: COG0745 negative response regulator of genes in aerobic pathways	aerobic respiration control protein	sensors, ArcB and CpxA; Code: TK; COG: COG0745 negative response regulator of genes in aerobic pathways	
ECOLI04248	Uncharacterized tRNA/rRNA methyltransferase lasT	Putative uncharacterized protein	rRNA methyltransferase related protein	tRNA/rRNA methyltransferase	Putative RNA methyltransferase	Hypothetical tRNA/rRNA methyltransferase lasT	Putative RNA methyltransferase	Putative uncharacterized protein lasT	Residues 8 to 235 of 235 are 98 pct identical to residues 1 to 228 of a 228 aa protein from Escherichia coli O157:H7 ref: NP_313388.1 orf, conserved hypothetical protein	putative tRNA/tRNA methyltransferase	similar to Salmonella typhi CT18 putative RNA methyltransferase putative RNA methyltransferase	Putative tRNA/tRNA methyltransferase	SpoU rRNA Methylase family	tRNA/rRNA methyltransferase	Code: J; COG: COG0565 conserved hypothetical protein	Code: J; COG: COG0565 conserved hypothetical protein	tRNA/rRNA methyltransferase (SpoU)	tRNA/rRNA methyltransferase	Code: J; COG: COG0565; orf conserved hypothetical protein	pseudo	probable tRNA/rRNA methyltransferase	RNA methyltransferase, TrmH family, group 1	RNA methyltransferase, TrmH family	Hypothetical tRNA/rRNA methyltransferase LasT	RNA methyltransferase, TrmH family, group 1 TIGRFAM: RNA methyltransferase, TrmH family, group 1 PFAM: tRNA/rRNA methyltransferase (SpoU) KEGG: rsp:RSP_3829 tRNA/rRNA methyltransferase (SpoU)	RNA methyltransferase, TrmH family, group 1 TIGRFAM: RNA methyltransferase, TrmH family, group 1 PFAM: tRNA/rRNA methyltransferase (SpoU) KEGG: stt:t4639 putative RNA methyltransferase	RNA methyltransferase, TrmH family, group 1 identified by match to protein family HMM PF00588; match to protein family HMM TIGR00050	RNA methyltransferase, TrmH family identified by match to protein family HMM PF00588	RNA methyltransferase	
